Carg18487 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18487
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	nicotinamidase 1
Location	Cucurbita_argyrosperma_scaffold_109 : 65807 .. 67372 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCGGAGGTTGTGGAGTTGTTGAAGGAGAACCTTCCGGTGACTCAGGAGCCTTTTGTTTTGTCCGGTGACGTTAACACTGGCCTCGTCCTCGTTGATGTCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGTAATTCCATTCGCTGATTTCTCTTCTCCGTTTCGATCCATGTCTTAATCTGGAAATTACTCCTTGAGATACAGAGTTCTAATTCGGAATATCATTCGCTATTGTTCTTTTTTTTTGTTTTATTTTTCCGATTACTCACTACAGAAGTTCCGTCGGATTTGGTAATGACTCCTTGTTTTTACAGGCTCCGAAACAGCATGACGAGCAAATTTCTCAAATGGTGGAGGAATCGGCGAGATTCGCTAGAGTTTTCTGCGAGAAAAAGTGGCCTATATTCGCCTTTCTTGATTCTCATCGTCCTGATATTCCAGAGCCTCCTTATCCTCCGCATTGCATTGCTGGAACCGACGAAGCCAAATTAGTTCCAGGTAGCATTTCCTGTACTGATACTCTCCATGATTGAATTTAAACTATATTTCCAATTTTGAAAATCTCTCGTCCTTGTTTGCAGCCTTGCAATGGCTAGAAAATGAGACGAATGTAACGCTGAAATGCAAAGACTGCATCGATGGATTTGTAGGTTGTTTGGAGAAAGATGGCTCTAATGTTTTCGTCGATTGGGTGAAAAACAATCAGATCAAAGTGGTGAGTATTCTCTAATTTTGAATCGGAGATACAATTTGGTCTAGTTACGTTTTCCCTTTTCAATTAGAGAAAGTTAACATTTGATCTGTTTTCTTCTCTGGAAAAAAAAAAAATAAAGATCTTAGTGCTGGGAATTTGCACCGACATATGCGTGCTGGATTTTGTTTGTTCAACATTATCTGCAAGAAATCGTGGTTTCCTTCCGCCATTAAAGGATGTGATTATATATTCCGGTGGCTGTGCCACTTTTGATCTTCCAGTTTCTGTGGCCAAAAATTTAGGAGATGCAATTGCTCATCCACAGGTATTCAAATTATTGATCCATCACTGACTTTGATATAAAATGAGTCTCTCTTCTTGTTCTTTATTAATCGAGTTTTTGTCCCTTCATATGCCCAAGCCTTAGTTTTATTGGAGATGATACGACCCTTAGCCAGCGTGGTTGAATTTGCTTGACTTGTCTGCATCCTTGGGATGATAAAATTATATGAACAAAGAATTTTAAGATTAGATCAAAGCACATTCTAATTCAACAATGTAATGATAATATCTACCGAATGGATTAGAGAAAGGAAAAAACAATTGGAGTATATTAATTATAGTCCATTTTTATTCCCCAAATGCTTTCTTGAAGTTAAAAGTAGGTCTATTAGCGTCCTTAAATCGAAAGTTCGAATATGAAGAGAGTCGAATGCTTGATTTCGTTTAATACTAGAATCTTGGGGAATGATAACAAAGTTGAATGTGTTATATCAGGCGCTGATGCACCACATAGGCCTGTACCTGGCAAGGGGAAGGGGAGCCAAGGTGGTATCAGAAGTTTCAATTAAGGCACTCTGA

mRNA sequence

ATGGTGTCGGAGGTTGTGGAGTTGTTGAAGGAGAACCTTCCGGTGACTCAGGAGCCTTTTGTTTTGTCCGGTGACGTTAACACTGGCCTCGTCCTCGTTGATGTCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGCTCCGAAACAGCATGACGAGCAAATTTCTCAAATGGTGGAGGAATCGGCGAGATTCGCTAGAGTTTTCTGCGAGAAAAAGTGGCCTATATTCGCCTTTCTTGATTCTCATCGTCCTGATATTCCAGAGCCTCCTTATCCTCCGCATTGCATTGCTGGAACCGACGAAGCCAAATTAGTTCCAGCCTTGCAATGGCTAGAAAATGAGACGAATGTAACGCTGAAATGCAAAGACTGCATCGATGGATTTGTAGGTTGTTTGGAGAAAGATGGCTCTAATGTTTTCGTCGATTGGGTGAAAAACAATCAGATCAAAGTGATCTTAGTGCTGGGAATTTGCACCGACATATGCGTGCTGGATTTTGTTTGTTCAACATTATCTGCAAGAAATCGTGGTTTCCTTCCGCCATTAAAGGATGTGATTATATATTCCGGTGGCTGTGCCACTTTTGATCTTCCAGTTTCTGTGGCCAAAAATTTAGGAGATGCAATTGCTCATCCACAGGCGCTGATGCACCACATAGGCCTGTACCTGGCAAGGGGAAGGGGAGCCAAGGTGGTATCAGAAGTTTCAATTAAGGCACTCTGA

Coding sequence (CDS)

ATGGTGTCGGAGGTTGTGGAGTTGTTGAAGGAGAACCTTCCGGTGACTCAGGAGCCTTTTGTTTTGTCCGGTGACGTTAACACTGGCCTCGTCCTCGTTGATGTCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGCTCCGAAACAGCATGACGAGCAAATTTCTCAAATGGTGGAGGAATCGGCGAGATTCGCTAGAGTTTTCTGCGAGAAAAAGTGGCCTATATTCGCCTTTCTTGATTCTCATCGTCCTGATATTCCAGAGCCTCCTTATCCTCCGCATTGCATTGCTGGAACCGACGAAGCCAAATTAGTTCCAGCCTTGCAATGGCTAGAAAATGAGACGAATGTAACGCTGAAATGCAAAGACTGCATCGATGGATTTGTAGGTTGTTTGGAGAAAGATGGCTCTAATGTTTTCGTCGATTGGGTGAAAAACAATCAGATCAAAGTGATCTTAGTGCTGGGAATTTGCACCGACATATGCGTGCTGGATTTTGTTTGTTCAACATTATCTGCAAGAAATCGTGGTTTCCTTCCGCCATTAAAGGATGTGATTATATATTCCGGTGGCTGTGCCACTTTTGATCTTCCAGTTTCTGTGGCCAAAAATTTAGGAGATGCAATTGCTCATCCACAGGCGCTGATGCACCACATAGGCCTGTACCTGGCAAGGGGAAGGGGAGCCAAGGTGGTATCAGAAGTTTCAATTAAGGCACTCTGA

Protein sequence

MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMVEESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVTLKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGFLPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIKAL

Homology

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BLAST of Carg18487 vs. NCBI nr
Match: XP_022962913.1 (nicotinamidase 1 [Cucurbita moschata])

HSP 1 Score: 495.7 bits (1275), Expect = 8.7e-137
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV
Sbjct: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESAR ARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           LPPLKDVIIYSGGCATFDLPVSVAKNLG+AIAHPQALMHHIGLYLARGRGAKVVSEVSIK
Sbjct: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGNAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240

Query: 241 AL 243
           AL
Sbjct: 241 AL 242

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BLAST of Carg18487 vs. NCBI nr
Match: XP_023518893.1 (nicotinamidase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.0 bits (1273), Expect = 1.5e-136
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPK HDEQISQMV
Sbjct: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKHHDEQISQMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESARFA+VFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT
Sbjct: 61  EESARFAKVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           LKCKDCIDGFVGCLEKDGSNVF+DWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LKCKDCIDGFVGCLEKDGSNVFIDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK
Sbjct: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240

Query: 241 A 242
           A
Sbjct: 241 A 241

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BLAST of Carg18487 vs. NCBI nr
Match: XP_023002980.1 (nicotinamidase 1 [Cucurbita maxima])

HSP 1 Score: 493.8 bits (1270), Expect = 3.3e-136
Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHD+QISQMV
Sbjct: 3   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDKQISQMV 62

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESAR ARVFCEKKWPIFAFLDSH PDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT
Sbjct: 63  EESARLARVFCEKKWPIFAFLDSHHPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 122

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           LKCKDCIDGFVGCLEKDGSNVF+DWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 123 LKCKDCIDGFVGCLEKDGSNVFIDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 182

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK
Sbjct: 183 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 242

Query: 241 AL 243
           AL
Sbjct: 243 AL 244

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BLAST of Carg18487 vs. NCBI nr
Match: XP_008440534.1 (PREDICTED: nicotinamidase 1 [Cucumis melo])

HSP 1 Score: 459.1 bits (1180), Expect = 9.0e-126
Identity = 218/242 (90.08%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MV EV+ELLKE+LPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQH++QISQMV
Sbjct: 1   MVLEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHNKQISQMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESAR ARVFCEKKWPIFAFLDSH PDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHHPDIPEHPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+CKDCIDGF+GCLEKDGSN+F+DWVK NQIK ILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKNILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YSGGCAT+DLPVSVAK LGDAIAHPQ LMHHIGLY+ARGRGAKVVSEVSIK
Sbjct: 181 LSPLEDVIVYSGGCATYDLPVSVAKTLGDAIAHPQELMHHIGLYMARGRGAKVVSEVSIK 240

Query: 241 AL 243
            L
Sbjct: 241 PL 242

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BLAST of Carg18487 vs. NCBI nr
Match: XP_022132823.1 (nicotinamidase 1 [Momordica charantia])

HSP 1 Score: 454.1 bits (1167), Expect = 2.9e-124
Identity = 217/240 (90.42%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVSEVVELLKE+LPV QE FVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHD+QIS+MV
Sbjct: 1   MVSEVVELLKEHLPVDQESFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDKQISEMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           +ES RFA VFCEKKWPIFAF+DSH PDIPEPPYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  KESVRFAGVFCEKKWPIFAFIDSHHPDIPEPPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+ KDCIDGF+GCLEKD SNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LRRKDCIDGFLGCLEKDASNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YSGGCATFDLPV VAK LGDAIAHPQ LMHHIGLY+ARGRGAKVVSEVSIK
Sbjct: 181 LSPLEDVIVYSGGCATFDLPVPVAKTLGDAIAHPQELMHHIGLYMARGRGAKVVSEVSIK 240

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BLAST of Carg18487 vs. TAIR10
Match: AT2G22570.1 (nicotinamidase 1)

HSP 1 Score: 345.9 bits (886), Expect = 2.0e-95
Identity = 155/237 (65.40%), Postives = 200/237 (84.39%), Query Frame = 0


Query: 5   VVELLKENLPV-TQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMVEES 64
           + + LK+ +PV  +EP +L+ D + GLV+VDVVNGFCT+G+GN+AP +H+EQIS+MVEES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 65  ARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVTLKC 124
           A+ AR FC++KWP+ AF+DSH PDIPE PYPPHCI GT+E++LVPAL+WLE+E   TL+ 
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 125 KDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGFLPP 184
           KDCI+GFVG +E DGSNVFVDWVK  QIKVI+V+GICTDICV DFV + LSARN G L P
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSP 186

Query: 185 LKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 241
           ++DV++YS GCATFDLP+ VAK++  A AHPQ LMHH+GLY+A+GRGA+VVS++S +
Sbjct: 187 VEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKISFE 243

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BLAST of Carg18487 vs. Swiss-Prot
Match: sp|Q8S8F9|NIC1_ARATH (Nicotinamidase 1 OS=Arabidopsis thaliana OX=3702 GN=NIC1 PE=1 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 3.6e-94
Identity = 155/237 (65.40%), Postives = 200/237 (84.39%), Query Frame = 0


Query: 5   VVELLKENLPV-TQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMVEES 64
           + + LK+ +PV  +EP +L+ D + GLV+VDVVNGFCT+G+GN+AP +H+EQIS+MVEES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 65  ARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVTLKC 124
           A+ AR FC++KWP+ AF+DSH PDIPE PYPPHCI GT+E++LVPAL+WLE+E   TL+ 
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 125 KDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGFLPP 184
           KDCI+GFVG +E DGSNVFVDWVK  QIKVI+V+GICTDICV DFV + LSARN G L P
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSP 186

Query: 185 LKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 241
           ++DV++YS GCATFDLP+ VAK++  A AHPQ LMHH+GLY+A+GRGA+VVS++S +
Sbjct: 187 VEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKISFE 243

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BLAST of Carg18487 vs. Swiss-Prot
Match: sp|O32091|PNCA_BACSU (Uncharacterized isochorismatase family protein PncA OS=Bacillus subtilis (strain 168) OX=224308 GN=pncA PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.5e-04
Identity = 49/179 (27.37%), Postives = 76/179 (42.46%), Query Frame = 0


Query: 30  LVLVDVVNGFCTVGAGNLAPKQHDEQISQMVEES-ARFARVFCEKKWPIFAFLDSHRPDI 89
           L+ +D  N F     G L   +      +M+EE+     + F      +   +DSH    
Sbjct: 5   LICIDYTNDF-VASDGKLTCGEP----GRMIEEAIVNLTKEFITNGDYVVLAVDSHDEGD 64

Query: 90  PEPP----YPPHCIAGTD----EAKLVPALQWLENETNVTLKCKDCIDGFVGC-LEKDGS 149
              P    +PPH I GT+      KL+P  Q  E+E NV    K     F G  LE    
Sbjct: 65  QYHPETRLFPPHNIKGTEGKDLYGKLLPLYQKHEHEPNVYYMEKTRYSAFAGTDLELK-- 124

Query: 150 NVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGFLPPLKDVIIYSGGCATFD 199
                 ++  QI  + + G+CTDICVL    + + A N+GF      ++++    A+F+
Sbjct: 125 ------LRERQIGELHLAGVCTDICVLH---TAVDAYNKGF-----RIVVHKQAVASFN 162

[Close]

BLAST of Carg18487 vs. TrEMBL
Match: tr|A0A1S3B1Y8|A0A1S3B1Y8_CUCME (nicotinamidase 1 OS=Cucumis melo OX=3656 GN=LOC103484929 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 6.0e-126
Identity = 218/242 (90.08%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MV EV+ELLKE+LPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQH++QISQMV
Sbjct: 1   MVLEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHNKQISQMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESAR ARVFCEKKWPIFAFLDSH PDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHHPDIPEHPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+CKDCIDGF+GCLEKDGSN+F+DWVK NQIK ILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKNILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YSGGCAT+DLPVSVAK LGDAIAHPQ LMHHIGLY+ARGRGAKVVSEVSIK
Sbjct: 181 LSPLEDVIVYSGGCATYDLPVSVAKTLGDAIAHPQELMHHIGLYMARGRGAKVVSEVSIK 240

Query: 241 AL 243
            L
Sbjct: 241 PL 242

[Close]

BLAST of Carg18487 vs. TrEMBL
Match: tr|A0A0A0KG59|A0A0A0KG59_CUCSA (Catalytic OS=Cucumis sativus OX=3659 GN=Csa_6G498960 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 4.3e-124
Identity = 212/241 (87.97%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MV EV+ELLKE+LP+TQEPFVLSGD+N GLVLVDVVNGFCTVGAGNLAPKQH+EQISQMV
Sbjct: 1   MVLEVMELLKEHLPLTQEPFVLSGDLNIGLVLVDVVNGFCTVGAGNLAPKQHNEQISQMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           EESAR ARVFCEKKWPIFAF DSH PDIPEPPYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARLARVFCEKKWPIFAFRDSHHPDIPEPPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+CKDCIDGF+GCLEKDGSN+F+DWVK NQIK ILVLGICTDICVLDFVCSTLSARNRGF
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKGILVLGICTDICVLDFVCSTLSARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YSGGCAT+DLPV+VAK LGDAIAHPQ LMHH+GLY+ARGRGAKVVSEVS K
Sbjct: 181 LSPLEDVIVYSGGCATYDLPVAVAKTLGDAIAHPQELMHHVGLYIARGRGAKVVSEVSTK 240

Query: 241 A 242
           +
Sbjct: 241 S 241

[Close]

BLAST of Carg18487 vs. TrEMBL
Match: tr|A0A2P4NAM4|A0A2P4NAM4_QUESU (Nicotinamidase 1 OS=Quercus suber OX=58331 GN=CFP56_41099 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 6.4e-112
Identity = 193/241 (80.08%), Postives = 213/241 (88.38%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVS  VELLKE LPV QE  VLS D+ TGLVLVD+VNGFCTVG+GNLAP Q DEQIS MV
Sbjct: 1   MVSSTVELLKEELPVNQESLVLSEDLKTGLVLVDIVNGFCTVGSGNLAPTQPDEQISGMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           +ES + ARVFCEKKWPIFAFLDSH PDIPEPPYPPHCIAGT E+KLVPALQWLENE N T
Sbjct: 61  DESVKLARVFCEKKWPIFAFLDSHHPDIPEPPYPPHCIAGTHESKLVPALQWLENEPNAT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+CKDCIDGF+G +EKDGSN+F+DWV+NNQIK ILV+GICTD+CVLDFVCSTLSARNRG 
Sbjct: 121 LRCKDCIDGFLGSIEKDGSNLFIDWVRNNQIKKILVVGICTDVCVLDFVCSTLSARNRGL 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YS GCATFDLP+ VAK + DAIAHPQ LMHHIGLY+A+GRGAKVVSEVS  
Sbjct: 181 LVPLEDVIVYSNGCATFDLPIHVAKTMKDAIAHPQELMHHIGLYIAKGRGAKVVSEVSFG 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of Carg18487 vs. TrEMBL
Match: tr|A0A2P4NAM9|A0A2P4NAM9_QUESU (Nicotinamidase 1 OS=Quercus suber OX=58331 GN=CFP56_41097 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 4.6e-110
Identity = 189/241 (78.42%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           M S  +ELLK+ LPV QE  VLS DV TGLVLVD+VNGFCTVG+GNLAP Q DEQ+S MV
Sbjct: 1   MASSTIELLKDELPVNQESLVLSEDVKTGLVLVDIVNGFCTVGSGNLAPTQPDEQVSGMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           +ES + ARVFCEKKWPIFAFLDSH PDIPE P+PPHCIAGTDEA+LVPALQWLENE NVT
Sbjct: 61  DESVKLARVFCEKKWPIFAFLDSHHPDIPEHPFPPHCIAGTDEARLVPALQWLENEPNVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           L+CKDCIDGF+G +EKDGSN F+DWV+NNQIK ILV+GICTD+CVLDFVCSTLSARNRG 
Sbjct: 121 LRCKDCIDGFLGSIEKDGSNFFIDWVRNNQIKKILVVGICTDVCVLDFVCSTLSARNRGL 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVSIK 240
           L PL+DVI+YS GCATFD P+ VAK + DAIAHPQ LMHHIGLY+A+GRGAKVVSEVS  
Sbjct: 181 LVPLEDVIVYSNGCATFDRPIHVAKTMKDAIAHPQELMHHIGLYIAKGRGAKVVSEVSFG 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of Carg18487 vs. TrEMBL
Match: tr|F6I2H0|F6I2H0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1364g00010 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-109
Identity = 188/238 (78.99%), Postives = 212/238 (89.08%), Query Frame = 0


Query: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60
           MVS+ +++L+  LPV QE  VLSG+V TGLVLVDVVNGFCTVGAGNLAP + D+QIS MV
Sbjct: 1   MVSKTIDMLRNELPVQQESLVLSGEVPTGLVLVDVVNGFCTVGAGNLAPVRPDKQISGMV 60

Query: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120
           +ES R ARVFCEKKWP+FAFLDSH PDIPEPPYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  DESVRLARVFCEKKWPVFAFLDSHHPDIPEPPYPPHCIAGTDESKLVPALQWLENEPNVT 120

Query: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180
           ++CKDCIDGF+G +EKDGSNVFVDWVK NQIK+ILV+GICTDICVLDFVCST+SARNRGF
Sbjct: 121 IRCKDCIDGFLGAIEKDGSNVFVDWVKTNQIKIILVVGICTDICVLDFVCSTISARNRGF 180

Query: 181 LPPLKDVIIYSGGCATFDLPVSVAKNLGDAIAHPQALMHHIGLYLARGRGAKVVSEVS 239
              L+DVI+YS GCATFDLP  VA+ +  AIAHPQ LMHHIGLY+A+GRGAKVVSEVS
Sbjct: 181 FTSLEDVIVYSHGCATFDLPDDVARTIPGAIAHPQELMHHIGLYMAKGRGAKVVSEVS 238

The following BLAST results are available for this feature:

BLAST of Carg18487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962913.1	8.7e-137	99.17	nicotinamidase 1 [Cucurbita moschata]	[more]
XP_023518893.1	1.5e-136	98.76	nicotinamidase 1 [Cucurbita pepo subsp. pepo]	[more]
XP_023002980.1	3.3e-136	98.35	nicotinamidase 1 [Cucurbita maxima]	[more]
XP_008440534.1	9.0e-126	90.08	PREDICTED: nicotinamidase 1 [Cucumis melo]	[more]
XP_022132823.1	2.9e-124	90.42	nicotinamidase 1 [Momordica charantia]	[more]

BLAST of Carg18487 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22570.1	2.0e-95	65.40	nicotinamidase 1	[more]

BLAST of Carg18487 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S8F9\|NIC1_ARATH	3.6e-94	65.40	Nicotinamidase 1 OS=Arabidopsis thaliana OX=3702 GN=NIC1 PE=1 SV=1	[more]
sp\|O32091\|PNCA_BACSU	3.5e-04	27.37	Uncharacterized isochorismatase family protein PncA OS=Bacillus subtilis (strain...	[more]

BLAST of Carg18487 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1Y8\|A0A1S3B1Y8_CUCME	6.0e-126	90.08	nicotinamidase 1 OS=Cucumis melo OX=3656 GN=LOC103484929 PE=4 SV=1	[more]
tr\|A0A0A0KG59\|A0A0A0KG59_CUCSA	4.3e-124	87.97	Catalytic OS=Cucumis sativus OX=3659 GN=Csa_6G498960 PE=4 SV=1	[more]
tr\|A0A2P4NAM4\|A0A2P4NAM4_QUESU	6.4e-112	80.08	Nicotinamidase 1 OS=Quercus suber OX=58331 GN=CFP56_41099 PE=4 SV=1	[more]
tr\|A0A2P4NAM9\|A0A2P4NAM9_QUESU	4.6e-110	78.42	Nicotinamidase 1 OS=Quercus suber OX=58331 GN=CFP56_41097 PE=4 SV=1	[more]
tr\|F6I2H0\|F6I2H0_VITVI	1.7e-109	78.99	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1364g00010 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR000868	Isochorismatase-like
IPR036380	Isochorismatase-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18487-RA	Carg18487-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036380	Isochorismatase-like superfamily	GENE3D	G3DSA:3.40.50.850		coord: 26..221 e-value: 5.8E-27 score: 97.0
IPR036380	Isochorismatase-like superfamily	SUPERFAMILY	SSF52499	Isochorismatase-like hydrolases	coord: 27..234
IPR000868	Isochorismatase-like	PFAM	PF00857	Isochorismatase	coord: 28..199 e-value: 1.9E-30 score: 106.2
None	No IPR available	PANTHER	PTHR11080	PYRAZINAMIDASE/NICOTINAMIDASE	coord: 1..241
None	No IPR available	PANTHER	PTHR11080:SF56	SUBFAMILY NOT NAMED	coord: 1..241
None	No IPR available	CDD	cd00431	cysteine_hydrolases	coord: 30..199 e-value: 1.76354E-25 score: 97.7246

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18487	Cla014101	Watermelon (97103) v1	carwmB0005
Carg18487	Csa6G498960	Cucumber (Chinese Long) v2	carcuB0003
Carg18487	MELO3C007712	Melon (DHL92) v3.5.1	carmeB0002
Carg18487	ClCG01G018340	Watermelon (Charleston Gray)	carwcgB0002
Carg18487	CSPI06G29770	Wild cucumber (PI 183967)	carcpiB0003
Carg18487	Cucsa.103970	Cucumber (Gy14) v1	carcgyB0001
Carg18487	CmaCh03G008470	Cucurbita maxima (Rimu)	carcmaB0003
Carg18487	CmaCh07G005740	Cucurbita maxima (Rimu)	carcmaB0004
Carg18487	CmoCh07G005810	Cucurbita moschata (Rifu)	carcmoB0005
Carg18487	Lsi01G008140	Bottle gourd (USVL1VR-Ls)	carlsiB001
Carg18487	Cp4.1LG19g10150	Cucurbita pepo (Zucchini)	carcpeB0002
Carg18487	CsGy6G029250	Cucumber (Gy14) v2	carcgybB0003
Carg18487	MELO3C007712.2	Melon (DHL92) v3.6.1	carmedB0003
Carg18487	CsaV3_6G044970	Cucumber (Chinese Long) v3	carcucB0003
Carg18487	Cla97C01G017670	Watermelon (97103) v2	carwmbB0002
Carg18487	Bhi03G001347	Wax gourd	carwgoB0004

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18487	Silver-seed gourd	carcarB001
Carg18487	Cucurbita moschata (Rifu)	carcmoB0004
Carg18487	Cucurbita pepo (Zucchini)	carcpeB0001