Carg18464 (gene) Silver-seed gourd

Overview
NameCarg18464
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMultiprotein bridging factor 1
LocationCucurbita_argyrosperma_scaffold_161 : 395647 .. 397177 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATTTTTTTATGTACCCCGACTAGAAACCCTAATTCTGATTCTGCGTATTACCGAGCGAGGAACCTCTTCGAAGGGAGAACACAAGAAAGTTGAGATGGCTGGAATCGGACCGCTTACACAGGATTGGGAGCCGGTGGTCATCAGGAAGAAGGCACCCAACGCGGCCGCGAAGAAGGATGAGAAAGCTGTCAATGCCGCACGGCGAGCCGGGGCGGAGATTGAGACTGTAAAGAAATGTGCGCTCACTCTATAACTTTGATCAATTATCCCTTCGATTTTCTTATTGAAACCCTAATCGCTGTTTTCTTGTCTTTGTTTTGTCTTTCAACTCTATTTAATCGTAAGTTCATAACTGTTAAGCGCGGAGGTGATGATAATCGGGTCAAGTTTCTTATTGGGAGGCCATTCGAGATGATTTTTTGAACTGGGTATCACATGGGGTGTCTAAATTTTCTAATGGATCGAGTGGGCAAGGATCGTTTGGGGATTGGGATATGCGTATCTGTTTGAAACCCCCTTATACTCTGCTCATGTTTATTCACGATTCCTGAGGAGTCTGTTTTATCAGGTGAACTTTAGTGTTCCAATGATACTTTCTTTTGCGTTCTGCAGCTACTGCTGGCTCCAACAAATCTGCTTCGAGCAGTACTTCTTTGAACACTAGGAAGCTTGACGAAGAGACTGAGAACCTTACACGTGAGTACTTCTGGATTACACTTGCATAGCATGGTTGTATAATTTTTTTTTTTTAAGATCTCTTTTTTCAATCAGTCAGTGGATCCGTTGGTTTCATATCTTATAAAGAGCTTGCATGCAGTGCATCACATGATATATTTACTATCTCAATTACTTTTATATCTCTCTATAGATGGCACAACCAAGTGCACGAAGCTTCATCATTTGATGTTAGCAATATGTTTTTAAATATCATTGTTCATGTTTTATTTTGACTCTAGATGATCGTGTACCAACTGAGCTGAAGAAAGCAATTATGCAAGCACGAACAGAGAAGAAGCTTACTCAGTCTCAGCTTGCTCAAGTATGTTTGTTTCATTTTTTGTTGGCTCGTCCCATTTTATGTGCGCGTATTAATGATGACCCCGATTTATGTTTTTCTTCCCCTGTAGCTTATTAATGAGAAGCCTCAAGTTATCCAGGAATACGAATCTGGTAAAGCTATTCCAAATCAACAAATCATTACCAAACTTGAGAGAGCTCTTGGGGCAAAACTGCGTGGGAAGAAATAAAGAGATGTGGAAAGTTAAGTATGAGTTCTGCACAAGCTTTTGTTTGAACCATGCACAAAAGTTTATTTCCTACCGTGGTTTCAATGTGTAATTATATGCGACCATCCTTGTGTGCTTTTATAACCACTGTTGCAATGTCTTTGTAAGTTCTTACCTGGAAATAAATGAATATCATGACTGTTATGTTGCGTTAGTTTCCAGATGTTTTGGCTGTACTTTTCACATCAGAATTAAATGGCTGCACCCATGACCATTAATAAGTTAGAACTTTGTATTGAGAGC

mRNA sequence

AGATTTTTTTATGTACCCCGACTAGAAACCCTAATTCTGATTCTGCGTATTACCGAGCGAGGAACCTCTTCGAAGGGAGAACACAAGAAAGTTGAGATGGCTGGAATCGGACCGCTTACACAGGATTGGGAGCCGGTGGTCATCAGGAAGAAGGCACCCAACGCGGCCGCGAAGAAGGATGAGAAAGCTGTCAATGCCGCACGGCGAGCCGGGGCGGAGATTGAGACTGTAAAGAAATCTACTGCTGGCTCCAACAAATCTGCTTCGAGCAGTACTTCTTTGAACACTAGGAAGCTTGACGAAGAGACTGAGAACCTTACACATGATCGTGTACCAACTGAGCTGAAGAAAGCAATTATGCAAGCACGAACAGAGAAGAAGCTTACTCAGTCTCAGCTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAATACGAATCTGGTAAAGCTATTCCAAATCAACAAATCATTACCAAACTTGAGAGAGCTCTTGGGGCAAAACTGCGTGGGAAGAAATAAAGAGATGTGGAAAGTTAAGTATGAGTTCTGCACAAGCTTTTGTTTGAACCATGCACAAAAGTTTATTTCCTACCGTGGTTTCAATGTGTAATTATATGCGACCATCCTTGTGTGCTTTTATAACCACTGTTGCAATGTCTTTGTAAGTTCTTACCTGGAAATAAATGAATATCATGACTGTTATGTTGCGTTAGTTTCCAGATGTTTTGGCTGTACTTTTCACATCAGAATTAAATGGCTGCACCCATGACCATTAATAAGTTAGAACTTTGTATTGAGAGC

Coding sequence (CDS)

ATGGCTGGAATCGGACCGCTTACACAGGATTGGGAGCCGGTGGTCATCAGGAAGAAGGCACCCAACGCGGCCGCGAAGAAGGATGAGAAAGCTGTCAATGCCGCACGGCGAGCCGGGGCGGAGATTGAGACTGTAAAGAAATCTACTGCTGGCTCCAACAAATCTGCTTCGAGCAGTACTTCTTTGAACACTAGGAAGCTTGACGAAGAGACTGAGAACCTTACACATGATCGTGTACCAACTGAGCTGAAGAAAGCAATTATGCAAGCACGAACAGAGAAGAAGCTTACTCAGTCTCAGCTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAATACGAATCTGGTAAAGCTATTCCAAATCAACAAATCATTACCAAACTTGAGAGAGCTCTTGGGGCAAAACTGCGTGGGAAGAAATAA

Protein sequence

MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSSTSLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Homology
[Close]
BLAST of Carg18464 vs. NCBI nr
Match: XP_022943574.1 (multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotein-bridging factor 1b [Cucurbita maxima] >XP_023513396.1 multiprotein-bridging factor 1b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST
Sbjct: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. NCBI nr
Match: XP_008448251.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-63
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGPL+QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. NCBI nr
Match: XP_023533868.1 (multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 4.9e-63
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGI PL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIVPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. NCBI nr
Match: XP_022149711.1 (multiprotein-bridging factor 1b-like [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 6.4e-63
Identity = 135/142 (95.07%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGPL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQ+YE+GKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQDYEAGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. NCBI nr
Match: XP_022947947.1 (multiprotein-bridging factor 1b-like [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 2.4e-62
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGI PL+QDWEPVV+RKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIVPLSQDWEPVVLRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENLTHDRVPTELKKAIMQAR EKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARMEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TAIR10
Match: AT3G58680.1 (multiprotein bridging factor 1B)

HSP 1 Score: 231.1 bits (588), Expect = 4.2e-61
Identity = 123/142 (86.62%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP+TQDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IETV+K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNT+KLD++TENL+HDRVPTELKKAIMQAR EKKLTQSQLA LINEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TAIR10
Match: AT2G42680.1 (multiprotein bridging factor 1A)

HSP 1 Score: 226.5 bits (576), Expect = 1.0e-59
Identity = 120/142 (84.51%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP+TQDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IETV+K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNT+ LD++TENLTH+RVPTELKKAIMQART+KKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TAIR10
Match: AT3G24500.1 (multiprotein bridging factor 1C)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-31
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 0 

Query: 5   GPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST--SL 64
           G +TQDWEPVV+ K    +   +D KAVNAA R G  ++TVKK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKAIP 124
           NT+KL+EETE    DRV  E++  I +AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGAKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of Carg18464 vs. Swiss-Prot
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.7e-60
Identity = 123/142 (86.62%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP+TQDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IETV+K  AGSNK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNT+KLD++TENL+HDRVPTELKKAIMQAR EKKLTQSQLA LINEKPQVIQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. Swiss-Prot
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.9e-58
Identity = 120/142 (84.51%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP+TQDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IETV+K  AG+NK+ASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNT+ LD++TENLTH+RVPTELKKAIMQART+KKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQI++KLERALGAKLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. Swiss-Prot
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.8e-30
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 0 

Query: 5   GPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST--SL 64
           G +TQDWEPVV+ K    +   +D KAVNAA R G  ++TVKK  AGSNK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKAIP 124
           NT+KL+EETE    DRV  E++  I +AR EKK++Q+ LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGAKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of Carg18464 vs. Swiss-Prot
Match: sp|Q5ZMC0|EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 0 

Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSSTSLNTRKLD 69
           DW+ V V+RKK P+AA  K ++AV AA+R G ++ET KK  AG NK      + NT KLD
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLD 64

Query: 70  EETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQVI +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMG 124

Query: 130 KLERALGAKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]
BLAST of Carg18464 vs. Swiss-Prot
Match: sp|Q6GPQ6|EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 75/133 (56.39%), Postives = 92/133 (69.17%), Query Frame = 0 

Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSSTSLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G E+ET KK +AG NK    + + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLD 64

Query: 70  EETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQVI +YE GKAIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 130 KLERALGAKLRGK 142
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]
BLAST of Carg18464 vs. TrEMBL
Match: tr|A0A1S3BIN6|A0A1S3BIN6_CUCME (multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGPL+QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET+KKS AGSNKSASSST
Sbjct: 1   MAGIGPLSQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETIKKSAAGSNKSASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TrEMBL
Match: tr|A0A2I4GFN0|A0A2I4GFN0_9ROSI (multiprotein-bridging factor 1b OS=Juglans regia OX=51240 GN=LOC109007487 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.6e-62
Identity = 133/142 (93.66%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP++QDWEPVVIRKKAPNAAAKKDEKAVNAARR GAEIET+KKSTAG+NK+ASSST
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRTGAEIETIKKSTAGTNKAASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL HDRVPTELKKAIMQAR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKAIMQARMEKKLTQSQLAQMINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALGAKLRGKK
Sbjct: 121 IPNQQIITKLERALGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TrEMBL
Match: tr|A0A2I4DY07|A0A2I4DY07_9ROSI (multiprotein-bridging factor 1b-like OS=Juglans regia OX=51240 GN=LOC108984493 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.9e-62
Identity = 133/142 (93.66%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAGIGP++QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAG+NK+ASSST
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGTNKAASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL H+RVPTELKKAIMQAR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHERVPTELKKAIMQARMEKKLTQSQLAQMINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLER LGAKLRGKK
Sbjct: 121 IPNQQIITKLERTLGAKLRGKK 142

[Close]
BLAST of Carg18464 vs. TrEMBL
Match: tr|A0A2P5FF82|A0A2P5FF82_9ROSA (Transcription regulator, DNA-binding OS=Trema orientalis OX=63057 GN=TorRG33x02_077210 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.7e-61
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           M+GIG ++QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAG+NK+ASSST
Sbjct: 1   MSGIGHISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGTNKAASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL HDRVPTELKKAIMQAR EKKLTQSQLAQ+INEKPQVIQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPTELKKAIMQARMEKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQIITKLERALG KLRGKK
Sbjct: 121 IPNQQIITKLERALGVKLRGKK 142

[Close]
BLAST of Carg18464 vs. TrEMBL
Match: tr|A0A059BND1|A0A059BND1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F01243 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.4e-60
Identity = 127/142 (89.44%), Postives = 137/142 (96.48%), Query Frame = 0 

Query: 1   MAGIGPLTQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSTAGSNKSASSST 60
           MAG+GP++QDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETV+K+ AGSNK+ASSST
Sbjct: 1   MAGVGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVRKANAGSNKAASSST 60

Query: 61  SLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQVIQEYESGKA 120
           SLNTRKLDEETENL HDRVP ELKKAIMQAR +KKLTQSQLAQL+NEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDEETENLAHDRVPNELKKAIMQARMDKKLTQSQLAQLVNEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGAKLRGKK 143
           IPNQQ+ITKLERALG KLRGKK
Sbjct: 121 IPNQQLITKLERALGVKLRGKK 142

The following BLAST results are available for this feature:
BLAST of Carg18464 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943574.11.8e-65100.00multiprotein-bridging factor 1b [Cucurbita moschata] >XP_022986044.1 multiprotei... [more]
XP_008448251.12.9e-6396.48PREDICTED: multiprotein-bridging factor 1b [Cucumis melo][more]
XP_023533868.14.9e-6396.48multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo][more]
XP_022149711.16.4e-6395.07multiprotein-bridging factor 1b-like [Momordica charantia][more]
XP_022947947.12.4e-6295.77multiprotein-bridging factor 1b-like [Cucurbita moschata][more]
BLAST of Carg18464 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G58680.14.2e-6186.62multiprotein bridging factor 1B[more]
AT2G42680.11.0e-5984.51multiprotein bridging factor 1A[more]
AT3G24500.11.6e-3153.24multiprotein bridging factor 1C[more]
BLAST of Carg18464 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXT3|MBF1B_ARATH7.7e-6086.62Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV... [more]
sp|Q9SJI8|MBF1A_ARATH1.9e-5884.51Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV... [more]
sp|Q9LV58|MBF1C_ARATH2.8e-3053.24Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV... [more]
sp|Q5ZMC0|EDF1_CHICK2.0e-2857.14Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN... [more]
sp|Q6GPQ6|EDF1_XENLA2.0e-2856.39Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G... [more]
BLAST of Carg18464 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BIN6|A0A1S3BIN6_CUCME1.9e-6396.48multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=... [more]
tr|A0A2I4GFN0|A0A2I4GFN0_9ROSI3.6e-6293.66multiprotein-bridging factor 1b OS=Juglans regia OX=51240 GN=LOC109007487 PE=4 S... [more]
tr|A0A2I4DY07|A0A2I4DY07_9ROSI7.9e-6293.66multiprotein-bridging factor 1b-like OS=Juglans regia OX=51240 GN=LOC108984493 P... [more]
tr|A0A2P5FF82|A0A2P5FF82_9ROSA6.7e-6192.96Transcription regulator, DNA-binding OS=Trema orientalis OX=63057 GN=TorRG33x02_... [more]
tr|A0A059BND1|A0A059BND1_EUCGR4.4e-6089.44Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F01243 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR010982Lambda_DNA-bd_dom_sf
IPR013729MBF1_N
IPR001387Cro/C1-type_HTH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18464-RACarg18464-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableGENE3DG3DSA:1.10.260.40coord: 71..142
e-value: 6.2E-30
score: 104.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availablePANTHERPTHR10245:SF101SUBFAMILY NOT NAMEDcoord: 22..142
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 22..142
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 86..141
e-value: 2.2E-11
score: 53.9
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 87..137
e-value: 5.3E-13
score: 48.7
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 87..141
score: 12.572
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 85..135
e-value: 1.15832E-9
score: 49.859
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 9..79
e-value: 3.3E-24
score: 85.0
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILYSSF47413lambda repressor-like DNA-binding domainscoord: 80..138