Carg18440 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18440
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Stress responsive A/B Barrel Domain
Location	Cucurbita_argyrosperma_scaffold_161 : 277996 .. 278801 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAGAGTTCAAGCATTTGGTGCTCGTAAAGTTTAAGGAAGGAGCGGCGGTAGAAGAGATTCTCAAAGGCATGGAGAATCTCGTCTCTGAAGTCGAAGCTGTCAAATCCTTTGAGTGGTAATCTTCCCCACCTTTGTTAAAATATTAAAATTTCAAAGCTATTCTTTGGGTATTGGTTTCTTCAGTTTTGTTGGATGCTTTTTAGCTTGGTGTGAACCCAAGAGTGAAGCGAAGGAAGGGATAATGGCACCTCTTAGTACTCAGATTAAAATACTACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTCTAAGGCTCTCTCTAACTTTTCACCTACATTTCTAAAATGGAAATATTATATATAAAAATGTTACAAACCTCCGCTCTTGTTGGACCCAAAGTTTAAGTATTTTTATGGCTGGGATGGACAATCTTATGACATGATGTAGAATGTTTTGTTTTATGTAATTTTGTGATAATTATATAATTTAGTTTCAAGATGTGTTAAAATTAATCAGAGGGTAAACATGATTTTTTTTCATATGATTTATCGTGGAAGGAAGAAGAAAGATGAATGTTTTAAGGTGAAAACAGGGGACAGGAAATAGAGGGACCAGAGATGCTTACACAGGGCTTCACGCACGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCATGCTGCGTTTGTCGGGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCGGCAGCCATTGACAAGATTGTGCTGCTTGATTTCCCGGCTATTCGTACCAAGCCAGCTCCAACAGCTTGA

mRNA sequence

ATGGGAGGAGAGTTCAAGCATTTGGTGCTCGTAAAGTTTAAGGAAGGAGCGGCGGTAGAAGAGATTCTCAAAGGCATGGAGAATCTCGTCTCTGAAGTCGAAGCTGTCAAATCCTTTGAGTGGGGACAGGAAATAGAGGGACCAGAGATGCTTACACAGGGCTTCACGCACGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCATGCTGCGTTTGTCGGGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCGGCAGCCATTGACAAGATTGTGCTGCTTGATTTCCCGGCTATTCGTACCAAGCCAGCTCCAACAGCTTGA

Coding sequence (CDS)

ATGGGAGGAGAGTTCAAGCATTTGGTGCTCGTAAAGTTTAAGGAAGGAGCGGCGGTAGAAGAGATTCTCAAAGGCATGGAGAATCTCGTCTCTGAAGTCGAAGCTGTCAAATCCTTTGAGTGGGGACAGGAAATAGAGGGACCAGAGATGCTTACACAGGGCTTCACGCACGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCATGCTGCGTTTGTCGGGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCGGCAGCCATTGACAAGATTGTGCTGCTTGATTTCCCGGCTATTCGTACCAAGCCAGCTCCAACAGCTTGA

Protein sequence

MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA

Homology

[Close]

BLAST of Carg18440 vs. NCBI nr
Match: XP_022943456.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata] >XP_023512321.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 3.5e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL
Sbjct: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA
Sbjct: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 108

[Close]

BLAST of Carg18440 vs. NCBI nr
Match: XP_022986047.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-52
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL
Sbjct: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           MTFENKEAHAAFVGHPKHVEFSATFSAAI+KIVLLDFPAIRTKPAPTA
Sbjct: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIEKIVLLDFPAIRTKPAPTA 108

[Close]

BLAST of Carg18440 vs. NCBI nr
Match: XP_008458618.1 (PREDICTED: stress-response A/B barrel domain-containing protein At5g22580 [Cucumis melo] >XP_011657057.1 PREDICTED: uncharacterized protein At5g22580 [Cucumis sativus] >KGN46925.1 hypothetical protein Csa_6G151130 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-48
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFL
Sbjct: 1   MGEEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEMEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP 105
           MTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAIR KP
Sbjct: 61  MTFENKEAHTAFVGHPKHVEFSATFSAAIDKIVVLDFPAIRAKP 104

[Close]

BLAST of Carg18440 vs. NCBI nr
Match: XP_022140579.1 (stress-response A/B barrel domain-containing protein At5g22580 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-48
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MGGEFKHLVLVKFKEGAAV+ ILKGMENLVSE+EAVKSFEWGQ++EGPEMLTQGFTHAFL
Sbjct: 1   MGGEFKHLVLVKFKEGAAVDGILKGMENLVSEIEAVKSFEWGQDMEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           MTFENKEAHAAFVGHPKH+EFSATFSAAIDKIVLLDFPAI  KP P A
Sbjct: 61  MTFENKEAHAAFVGHPKHIEFSATFSAAIDKIVLLDFPAIVAKPPPPA 108

[Close]

BLAST of Carg18440 vs. NCBI nr
Match: XP_022958177.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata])

HSP 1 Score: 196.4 bits (498), Expect = 4.9e-47
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           M GEFKHLVLVKFKEGAAV EILKGMENLV+E+EAVKSFEWGQE+EGPEMLTQGFTHAFL
Sbjct: 1   MEGEFKHLVLVKFKEGAAVGEILKGMENLVTEIEAVKSFEWGQEMEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           MTFENKEAH+AF  HPKHVEFSATFSAAI+KIVLLDFPAIR KP P+A
Sbjct: 61  MTFENKEAHSAFTAHPKHVEFSATFSAAIEKIVLLDFPAIRAKPPPSA 108

[Close]

BLAST of Carg18440 vs. TAIR10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain)

HSP 1 Score: 142.5 bits (358), Expect = 1.5e-34
Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 5   FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFE 64
           FKHLV+VKFKE   V+EILKG+ENLVS+++ VKSFEWG++ E  +ML QGFTHAF MTFE
Sbjct: 6   FKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFE 65

Query: 65  NKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           NK+ + AF  HP HVEFSA F+A IDKIVLLDFP    K +  A
Sbjct: 66  NKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKSSVVA 109

[Close]

BLAST of Carg18440 vs. TAIR10
Match: AT3G17210.1 (heat stable protein 1)

HSP 1 Score: 94.7 bits (234), Expect = 3.6e-20
Identity = 43/98 (43.88%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 3   GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAF 62
           G  KH++L  FK+G +   +EE++KG  NLV+ +E +K+F WG+++   E L QG+TH F
Sbjct: 6   GPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGYTHIF 65

Query: 63  LMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF 98
             TFE+KEA A ++ HP HVEF+  F  ++DK++++D+
Sbjct: 66  ESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDY 102

[Close]

BLAST of Carg18440 vs. Swiss-Prot
Match: sp|Q9FK81|Y5258_ARATH (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-33
Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 5   FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFE 64
           FKHLV+VKFKE   V+EILKG+ENLVS+++ VKSFEWG++ E  +ML QGFTHAF MTFE
Sbjct: 6   FKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFE 65

Query: 65  NKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA 109
           NK+ + AF  HP HVEFSA F+A IDKIVLLDFP    K +  A
Sbjct: 66  NKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKSSVVA 109

[Close]

BLAST of Carg18440 vs. Swiss-Prot
Match: sp|Q9LUV2|POP3_ARATH (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-19
Identity = 43/98 (43.88%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 3   GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAF 62
           G  KH++L  FK+G +   +EE++KG  NLV+ +E +K+F WG+++   E L QG+TH F
Sbjct: 6   GPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGYTHIF 65

Query: 63  LMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF 98
             TFE+KEA A ++ HP HVEF+  F  ++DK++++D+
Sbjct: 66  ESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDY 102

[Close]

BLAST of Carg18440 vs. Swiss-Prot
Match: sp|I6WU39|OLIAC_CANSA (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-08
Identity = 31/95 (32.63%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 6  KHLVLVKFKE---GAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMT 65
          KHL+++KFK+    A  EE  K   NLV+ + A+K   WG+++   +   +G+TH   +T
Sbjct: 4  KHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVT-QKNKEEGYTHIVEVT 63

Query: 66 FENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF 98
          FE+ E    ++ HP HV F   + +  +K+++ D+
Sbjct: 64 FESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY 97

[Close]

BLAST of Carg18440 vs. TrEMBL
Match: tr|A0A1S3C8U9|A0A1S3C8U9_CUCME (stress-response A/B barrel domain-containing protein At5g22580 OS=Cucumis melo OX=3656 GN=LOC103497965 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-48
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFL
Sbjct: 1   MGEEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEMEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP 105
           MTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAIR KP
Sbjct: 61  MTFENKEAHTAFVGHPKHVEFSATFSAAIDKIVVLDFPAIRAKP 104

[Close]

BLAST of Carg18440 vs. TrEMBL
Match: tr|A0A0A0KB18|A0A0A0KB18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151130 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-48
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFL 60
           MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFL
Sbjct: 1   MGEEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEMEGPEMLTQGFTHAFL 60

Query: 61  MTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP 105
           MTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAIR KP
Sbjct: 61  MTFENKEAHTAFVGHPKHVEFSATFSAAIDKIVVLDFPAIRAKP 104

[Close]

BLAST of Carg18440 vs. TrEMBL
Match: tr|Q58A16|Q58A16_CUCME (Uncharacterized protein 7E10 (Fragment) OS=Cucumis melo OX=3656 GN=7E10 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 6   KHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFEN 65
           KHL LVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFLMTFEN
Sbjct: 1   KHLALVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEMEGPEMLTQGFTHAFLMTFEN 60

Query: 66  KEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP 105
           KEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAIR KP
Sbjct: 61  KEAHTAFVGHPKHVEFSATFSAAIDKIVVLDFPAIRAKP 99

[Close]

BLAST of Carg18440 vs. TrEMBL
Match: tr|A0A2P4LWL4|A0A2P4LWL4_QUESU (Stress-response a/b barrel domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_53420 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-36
Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 3   GEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMT 62
           G+FKHLV+ KFKEGA VEE+LKGME LVS+++AVKSFEWGQ+IE  EML QGFTHAFLMT
Sbjct: 2   GDFKHLVIAKFKEGAVVEEVLKGMEKLVSDIDAVKSFEWGQDIESQEMLRQGFTHAFLMT 61

Query: 63  FENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTK 104
           F  KE   AFV HP HVEFSATFSAAI+KIVLLDFPA+  K
Sbjct: 62  FNKKEDFTAFVSHPNHVEFSATFSAAIEKIVLLDFPAVLAK 102

[Close]

BLAST of Carg18440 vs. TrEMBL
Match: tr|A0A2K2AWU0|A0A2K2AWU0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G187500v3 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-36
Identity = 76/103 (73.79%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 3   GEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMT 62
           GE KHLV+VKFKEG A+EEI+KGME LVSEV+ VKSFEWGQ+ EGPEMLTQGFTH+F MT
Sbjct: 7   GEIKHLVVVKFKEGVAIEEIIKGMEKLVSEVDLVKSFEWGQDTEGPEMLTQGFTHSFSMT 66

Query: 63  FENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPA 106
           F+ KE +AAF  HP HVE+SATFSAAI+KI +L FP +R KPA
Sbjct: 67  FDKKEDYAAFQSHPNHVEYSATFSAAIEKIAVLCFPYVRVKPA 109

The following BLAST results are available for this feature:

BLAST of Carg18440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943456.1	3.5e-53	100.00	stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita m...	[more]
XP_022986047.1	1.0e-52	99.07	stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita m...	[more]
XP_008458618.1	2.6e-48	95.19	PREDICTED: stress-response A/B barrel domain-containing protein At5g22580 [Cucum...	[more]
XP_022140579.1	2.6e-48	90.74	stress-response A/B barrel domain-containing protein At5g22580 [Momordica charan...	[more]
XP_022958177.1	4.9e-47	88.89	stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita m...	[more]

BLAST of Carg18440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22580.1	1.5e-34	65.38	Stress responsive A/B Barrel Domain	[more]
AT3G17210.1	3.6e-20	43.88	heat stable protein 1	[more]

BLAST of Carg18440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FK81\|Y5258_ARATH	2.7e-33	65.38	Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis th...	[more]
sp\|Q9LUV2\|POP3_ARATH	6.5e-19	43.88	Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana...	[more]
sp\|I6WU39\|OLIAC_CANSA	4.0e-08	32.63	Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1	[more]

BLAST of Carg18440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8U9\|A0A1S3C8U9_CUCME	1.7e-48	95.19	stress-response A/B barrel domain-containing protein At5g22580 OS=Cucumis melo O...	[more]
tr\|A0A0A0KB18\|A0A0A0KB18_CUCSA	1.7e-48	95.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151130 PE=4 SV=1	[more]
tr\|Q58A16\|Q58A16_CUCME	1.4e-45	94.95	Uncharacterized protein 7E10 (Fragment) OS=Cucumis melo OX=3656 GN=7E10 PE=2 SV=...	[more]
tr\|A0A2P4LWL4\|A0A2P4LWL4_QUESU	1.5e-36	76.24	Stress-response a/b barrel domain-containing protein OS=Quercus suber OX=58331 G...	[more]
tr\|A0A2K2AWU0\|A0A2K2AWU0_POPTR	2.6e-36	73.79	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G187500v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011008	Dimeric_a/b-barrel
IPR013097	Dabb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18440-RA	Carg18440-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 5..99 e-value: 6.2E-22 score: 88.9
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 6..98 e-value: 1.4E-23 score: 83.2
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 5..97 score: 27.228
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 2..108 e-value: 3.8E-38 score: 131.7
None	No IPR available	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 3..105
None	No IPR available	PANTHER	PTHR33178:SF4	SUBFAMILY NOT NAMED	coord: 3..105
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	SSF54909	Dimeric alpha+beta barrel	coord: 4..100

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18440	Cla008667	Watermelon (97103) v1	carwmB0413
Carg18440	Csa6G151130	Cucumber (Chinese Long) v2	carcuB0446
Carg18440	MELO3C021447	Melon (DHL92) v3.5.1	carmeB0419
Carg18440	ClCG02G021950	Watermelon (Charleston Gray)	carwcgB0409
Carg18440	CSPI06G12310	Wild cucumber (PI 183967)	carcpiB0451
Carg18440	Cucsa.385330	Cucumber (Gy14) v1	carcgyB0482
Carg18440	CmaCh02G013460	Cucurbita maxima (Rimu)	carcmaB0576
Carg18440	CmaCh20G001840	Cucurbita maxima (Rimu)	carcmaB0575
Carg18440	CmoCh02G013830	Cucurbita moschata (Rifu)	carcmoB0560
Carg18440	CmoCh20G002040	Cucurbita moschata (Rifu)	carcmoB0559
Carg18440	Lsi10G011870	Bottle gourd (USVL1VR-Ls)	carlsiB375
Carg18440	Cp4.1LG16g07940	Cucurbita pepo (Zucchini)	carcpeB0579
Carg18440	Cp4.1LG05g04220	Cucurbita pepo (Zucchini)	carcpeB0583
Carg18440	CsGy6G012370	Cucumber (Gy14) v2	carcgybB0422
Carg18440	MELO3C021447.2	Melon (DHL92) v3.6.1	carmedB0423
Carg18440	CsaV3_6G014780	Cucumber (Chinese Long) v3	carcucB0447
Carg18440	Cla97C02G048010	Watermelon (97103) v2	carwmbB0439
Carg18440	Bhi10G000059	Wax gourd	carwgoB0499

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18440	Carg02617	Silver-seed gourd	carcarB433

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18440	Cucurbita pepo (Zucchini)	carcpeB0582