Carg18419 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGGTTGACGGCGGAGTCAAGAAGTTTTGTTTTCCCAATTCCGAAAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGTTTGCCCTTTTCTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCATCACTTCCTATCTAAACAGGGCTGATTTGGTCATTTTTAATTTGGTTTTCAAAACAGGGAAATCGAGAATCCCTTCCGACAACGAGTGGTTCTTCTTCTCTCCGAGAGGAAGAAAATACCCAAACGGAACACAGAACAAGAGGGCGACTGAATTGGGGTACTGGAAGGCCACCGGAAAAGAGCGAAACGTGAAGTCCGGCTCGGAGATTATCGGAACAAAGAGGACTCTGGTTTTCCATTTAGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGTCAAATTCAATTGCAATTCCTCCTTCCTTTTCCTTTGCTGCTTACGTAAACTACTGTATGACAGCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGTCAGCTTCGTCAGATTCTCACGTTCAATTGCACAATTCCCAAATCCGTCGCTTTGCCTTTTTTTAAATTTCTATTTTATTTTTTTAATATTAAAAATAGCTAACTTTTTTTTTTTATATTAAAAATAGATATAAATATATATAATTATATGGTAAGAAAAATGTTTTTTTTTTCCCGAGTCATAAAAAAATGATTGGATGTCAATCTTTGAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACGTACTTTGTAATTTATAATTATCATGTTCATTGTTACATTTACATTTATGGTTATGTTAACGTCACTCTCTCTTTTTTATTTATTTGTTTTCAAGCATTTATACATATTCTTCTAACTATGGTAGTTGACCCATCGGTATCGTATATTATTTATATATAAAAAAAAGACCCGATCTTTTATATCCCATTTTGATATTTTAGTCTTTAATTTTTTTAAAAAACTATTTTATCTCAATTTTTTTATGTGCCTATTTTAGTATAAATAATTGAAAATTAACTTTAATACTAACTTAGTATATTTAAATCAACCAATTAAATATTGTATTTATTAAAAAACAATATGATGAAAAGTAAAATAAATATTCTTAAATATATTTAGAGACAACAAAAATTATTATTATTATTCTTTTTTGTCCTAAGATTTAAAAATTTAAGACAATTGTTATTATAATTAGTGCCGGTGTGGTTACTTGCGCGCGTTAAAACGTGAAGCTGAAGCGCGTCCAAATTGGAAGCAGTATCTTCTTGTTTGTCGGCGACCTTCTGAAATCCTGTTTGCCATCTTCCAAAGCTTCGCCGCAGCCGGTTTACAGTTGAATTGAAGGGTTCGTGACTGTCTTCCGCTTCCTTAATTTTCAAGCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGGTAAGTTCTTCTTTTCTTCATTTTCGATATCCTGAGTTCAATTTAAGCCAAATCGATCATTGTTTGAACCTCATCCAAGGTCAAATCGCTACGCCCAGGGTTTCTCTGTGAATCCTGATTTTCAGGCTTGTTTTATGTCTGTGCGAGGTCTTTTATGCGTTCATATAACTCAATGCGGTGTGATAGTTGATTCTTATCTTAATCATGTGCAGATATATCGACAGCCCTTTGTAA ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGATATATCGACAGCCCTTTGTAA ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGATATATCGACAGCCCTTTGTAA MKKSITRSTRRLNRALKKRIPVRICDKQNQHKLESKGKGTMGGVSREAEMSMAALSMFPGFRFSPKDEELILFYLKKKLQGSDDSVDVISEIEICKFEPWDLPGRAPTGERTEWIMHEYCLNDTSQDSNSMVVCRLRKNNDFRRNNSDKAGSSKVQGSGEDGDGGVGQKVGGESDRLSKNCSSSFDSHSLEQTDSGIEFRRKETSDPALHESLSPEKGNGEDEELYADLLKDDIITLDDNLLSATHNPTPMIMNFSESEKYTHLPIPTALPEAEASPLLGNTTRKIKLKKQERNNVYINLGLLTFLLIIFIASLHRSTLFSKSAEPLSDSPSYAKFRLKKLPRIPRLIFDLGFFSILIAVHRYIDSPL
BLAST of Carg18419 vs. NCBI nr
Match: XP_022944560.1 (NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 510.8 bits (1314), Expect = 4.0e-141 Identity = 274/345 (79.42%), Postives = 277/345 (80.29%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_022944561.1 (NAC domain-containing protein 40-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 498.4 bits (1282), Expect = 2.0e-137 Identity = 268/337 (79.53%), Postives = 270/337 (80.12%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_023512161.1 (NAC domain-containing protein 40 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136 Identity = 264/345 (76.52%), Postives = 273/345 (79.13%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_022985895.1 (NAC domain-containing protein 40-like [Cucurbita maxima]) HSP 1 Score: 490.3 bits (1261), Expect = 5.5e-135 Identity = 266/344 (77.33%), Postives = 270/344 (78.49%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_016900731.1 (PREDICTED: NAC domain-containing protein 40 [Cucumis melo]) HSP 1 Score: 392.1 bits (1006), Expect = 2.1e-105 Identity = 222/346 (64.16%), Postives = 241/346 (69.65%), Query Frame = 0
BLAST of Carg18419 vs. TAIR10
Match: AT5G22290.1 (NAC domain containing protein 89) HSP 1 Score: 121.7 bits (304), Expect = 9.4e-28 Identity = 94/313 (30.03%), Postives = 142/313 (45.37%), Query Frame = 0
BLAST of Carg18419 vs. TAIR10
Match: AT2G27300.1 (NTM1-like 8) HSP 1 Score: 86.7 bits (213), Expect = 3.4e-17 Identity = 83/264 (31.44%), Postives = 123/264 (46.59%), Query Frame = 0
BLAST of Carg18419 vs. TAIR10
Match: AT5G24590.2 (TCV-interacting protein) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 54/163 (33.13%), Postives = 67/163 (41.10%), Query Frame = 0
BLAST of Carg18419 vs. TAIR10
Match: AT1G33060.2 (NAC 014) HSP 1 Score: 77.0 bits (188), Expect = 2.7e-14 Identity = 54/160 (33.75%), Postives = 64/160 (40.00%), Query Frame = 0
BLAST of Carg18419 vs. TAIR10
Match: AT1G65910.1 (NAC domain containing protein 28) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14 Identity = 48/157 (30.57%), Postives = 66/157 (42.04%), Query Frame = 0
BLAST of Carg18419 vs. Swiss-Prot
Match: sp|Q94F58|NAC89_ARATH (NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26 Identity = 94/313 (30.03%), Postives = 142/313 (45.37%), Query Frame = 0
BLAST of Carg18419 vs. Swiss-Prot
Match: sp|Q9XIN7|NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.0e-16 Identity = 83/264 (31.44%), Postives = 123/264 (46.59%), Query Frame = 0
BLAST of Carg18419 vs. Swiss-Prot
Match: sp|Q9LKG8|NAC91_ARATH (NAC domain-containing protein 91 OS=Arabidopsis thaliana OX=3702 GN=NAC091 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.4e-14 Identity = 54/163 (33.13%), Postives = 67/163 (41.10%), Query Frame = 0
BLAST of Carg18419 vs. Swiss-Prot
Match: sp|B5X570|NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=NAC014 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.8e-13 Identity = 54/160 (33.75%), Postives = 64/160 (40.00%), Query Frame = 0
BLAST of Carg18419 vs. Swiss-Prot
Match: sp|Q9LXL9|NAC60_ARATH (NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-12 Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Carg18419 vs. TrEMBL
Match: tr|A0A1S4DXM3|A0A1S4DXM3_CUCME (NAC domain-containing protein 40 OS=Cucumis melo OX=3656 GN=LOC103491667 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105 Identity = 222/346 (64.16%), Postives = 241/346 (69.65%), Query Frame = 0
BLAST of Carg18419 vs. TrEMBL
Match: tr|A0A0A0KGX0|A0A0A0KGX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425760 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102 Identity = 216/338 (63.91%), Postives = 235/338 (69.53%), Query Frame = 0
BLAST of Carg18419 vs. TrEMBL
Match: tr|A0A061GZN7|A0A061GZN7_THECC (NAC domain-containing protein 74, putative isoform 3 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_041332 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 4.4e-48 Identity = 134/316 (42.41%), Postives = 169/316 (53.48%), Query Frame = 0
BLAST of Carg18419 vs. TrEMBL
Match: tr|A0A061GVZ7|A0A061GVZ7_THECC (NAC domain protein, IPR003441, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_041332 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 9.9e-48 Identity = 134/319 (42.01%), Postives = 169/319 (52.98%), Query Frame = 0
BLAST of Carg18419 vs. TrEMBL
Match: tr|A0A251NQ15|A0A251NQ15_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G138100 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47 Identity = 131/322 (40.68%), Postives = 178/322 (55.28%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |