Carg18315 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18315
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dof zinc finger protein like
Location	Cucurbita_argyrosperma_scaffold_106 : 36854 .. 38009 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTAGAGAGAGAAAGGCATAAAGTAAAGAAACCCTACTTTGGTGGCCATCTTCTTTCTCTCATTTCCCAGCAAATGTGATTCTCCACCATCACTAACCTTTTACCATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCGTGAGTGGTTTCGAGCCCTACAATTCCCACCTTTTTTTTTTTTTTTTTTTTTAATTTTATTTTATCTGTTCTTGAATATACTCCATCTTTAATCCTGCTTGTTTTTTGGTTTTTCCCAGTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

mRNA sequence

AATCTAGAGAGAGAAAGGCATAAAGTAAAGAAACCCTACTTTGGTGGCCATCTTCTTTCTCTCATTTCCCAGCAAATGTGATTCTCCACCATCACTAACCTTTTACCATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

Coding sequence (CDS)

ATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

Protein sequence

MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTRYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLSRQ

Homology

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_022941607.1 (dof zinc finger protein DOF3.6-like [Cucurbita moschata])

HSP 1 Score: 513.8 bits (1322), Expect = 3.9e-142
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSFNTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTDR 60
           MVFPLDPPPNWPSFNTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTDR
Sbjct: 1   MVFPLDPPPNWPSFNTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTDR 60

Query: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120
           ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG
Sbjct: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120

Query: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIXXX 180
           GCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIXXX
Sbjct: 121 GCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIXXX 180

Query: 181 XXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240
           XXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPN+LYTFDPPEGATTR
Sbjct: 181 XXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNILYTFDPPEGATTR 240

Query: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300
           YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT
Sbjct: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300

Query: 301 SSAGHLSRQ 310
           SSAGHLSRQ
Sbjct: 301 SSAGHLSRQ 309

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BLAST of Carg18315 vs. NCBI nr
Match: XP_023546231.1 (dof zinc finger protein DOF2.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.5 bits (1251), Expect = 6.7e-134
Identity = 293/310 (94.52%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSF-NTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTD 60
           MVFPLDPPPNWPSF N +QN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTD
Sbjct: 1   MVFPLDPPPNWPSFSNPEQN---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTD 60

Query: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120
           RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG
Sbjct: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120

Query: 121 GGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIXX 180
           GGCRRNKRAKP NRSKSP A ER SSANSTPAVSLS QPHLPFLSSLHNFSNYLNLGI  
Sbjct: 121 GGCRRNKRAKPPNRSKSPMASERPSSANSTPAVSLSPQPHLPFLSSLHNFSNYLNLGI-- 180

Query: 181 XXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT 240
             XXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT
Sbjct: 181 --XXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT 240

Query: 241 RYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFA 300
           RYNLNELSRLEMENNVG+TMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSF 
Sbjct: 241 RYNLNELSRLEMENNVGMTMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFT 300

Query: 301 TSSAGHLSRQ 310
           TSSAGHLSRQ
Sbjct: 301 TSSAGHLSRQ 303

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_022992301.1 (dof zinc finger protein DOF3.6-like [Cucurbita maxima])

HSP 1 Score: 482.6 bits (1241), Expect = 9.7e-133
Identity = 286/310 (92.26%), Postives = 287/310 (92.58%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSF-NTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVSMTD 60
           MVFPLD PPNWPSF N QQN           XXXXXXXXXXXXXXXXXXXX IRPVSMTD
Sbjct: 1   MVFPLDLPPNWPSFSNPQQN--NPAPDSDQVXXXXXXXXXXXXXXXXXXXXFIRPVSMTD 60

Query: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120
           RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG
Sbjct: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120

Query: 121 GGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIXX 180
           GGCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGI  
Sbjct: 121 GGCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGI-- 180

Query: 181 XXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT 240
           XXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPE ATT
Sbjct: 181 XXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPESATT 240

Query: 241 RYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFA 300
           RYNLN LSRLEMENNVG+ MAGTVKVEESKAMNLGKNFQFWVGGGDTN WSTGADLHSFA
Sbjct: 241 RYNLNGLSRLEMENNVGMAMAGTVKVEESKAMNLGKNFQFWVGGGDTNTWSTGADLHSFA 300

Query: 301 TSSAGHLSRQ 310
           TSSA HLSRQ
Sbjct: 301 TSSAEHLSRQ 306

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_004147691.1 (PREDICTED: dof zinc finger protein DOF2.4 [Cucumis sativus] >KGN50547.1 hypothetical protein Csa_5G182030 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 5.4e-99
Identity = 231/325 (71.08%), Postives = 244/325 (75.08%), Query Frame = 0


Query: 1   MVFPLDP----PPNWPSFNTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVS 60
           MVFP  P    PPNW      Q    XXXXXXXXXXXXXXXXXXXXXXXXXXX  IRPVS
Sbjct: 1   MVFPPLPSYLDPPNWQPLTNHQTGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXGSIRPVS 60

Query: 61  MTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV 120
           MTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV
Sbjct: 61  MTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV 120

Query: 121 PVGGGCRRNKRAKPQNRSKSPTAGER---SSSANSTPAVSLSAQPHLPFLSSLHNFSNY- 180
           PVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSLHNFS Y 
Sbjct: 121 PVGGGCRRNKRTKSRNRSKSPAASERQLLGGSTNSTAAVSLSTQPHLPFLSSLHNFSTYG 180

Query: 181 LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFD 240
           LNLGI                     D+HEF GDHWRLQ PQQFP+LAN+QQPNLLYTF+
Sbjct: 181 LNLGIIPPQAPPTSGGSAAGGV----DVHEFQGDHWRLQPPQQFPLLANDQQPNLLYTFE 240

Query: 241 PPEGATTRYNLNELSRLEMENNVGITM-AGTVKVEESKAMNLGKNFQFWVGGG---DTNA 300
           PPEGA  RYNL   SRL +EN++G+TM +G VKVEESK MNLGKNFQFWVGGG   D NA
Sbjct: 241 PPEGAMARYNLGGFSRLGIENDIGMTMESGAVKVEESKGMNLGKNFQFWVGGGGGNDVNA 300

Query: 301 ----WSTGADLHSFATSSAGHLSRQ 310
                   ADLH F+++SA HL RQ
Sbjct: 301 XXXXXXXXADLHGFSSASASHLLRQ 321

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_008461665.1 (PREDICTED: dof zinc finger protein DOF2.4 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 5.6e-96
Identity = 189/270 (70.00%), Postives = 203/270 (75.19%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP+SMTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGG
Sbjct: 58  IRPISMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 117

Query: 112 ALRNVPVGGGCRRNKRAKPQNRSKSPTAGERS---SSANSTPAVSLSAQPHLPFLSSLHN 171
           ALRNVPVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSL N
Sbjct: 118 ALRNVPVGGGCRRNKRTKSRNRSKSPAASERQLLVGSTNSTAAVSLSTQPHLPFLSSLQN 177

Query: 172 FSNY-LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNL 231
           FS Y LNLGI                     D+HEF GDHWRLQQPQQFP+LAN+QQPNL
Sbjct: 178 FSTYGLNLGIIPPQAPPTSGGSAAGGV----DVHEFQGDHWRLQQPQQFPLLANDQQPNL 237

Query: 232 LYTFDPPEGATTRYNLNELSRLEMENNVGITMAG-TVKVEESKAMNLGKNFQFWVGGG-- 291
           LYTF+PPEGA TRYNL   SRL +EN++G++M G  VKVEESK MNLGKNFQFWVGGG  
Sbjct: 238 LYTFEPPEGAMTRYNLGGFSRLGIENDIGMSMEGEAVKVEESKGMNLGKNFQFWVGGGGX 297

Query: 292 -----DTNAWSTGADLHSFATSSAGHLSRQ 310
                         +LH F++SSA HL RQ
Sbjct: 298 XXVXXXXXXXXXXXELHGFSSSSASHLLRQ 323

[Close]

BLAST of Carg18315 vs. TAIR10
Match: AT3G55370.3 (OBF-binding protein 3)

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-34
Identity = 107/285 (37.54%), Postives = 139/285 (48.77%), Query Frame = 0


Query: 56  SMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRN 115
           SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYWTRGG+LRN
Sbjct: 104 SMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRN 163

Query: 116 VPVGGGCRRNKRAKPQNRSK---SPTAGERSSSANSTPAVSLSAQPH-----------LP 175
           VPVGGG RRNKR+K +++S    S        S  S P+ S  ++ H           LP
Sbjct: 164 VPVGGGFRRNKRSKSRSKSTVVVSTDNXXXXXSLTSRPSYSNPSKFHSYGQIPEFNSNLP 223

Query: 176 FLSSLHNFSNY--LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRL---QQPQQF 235
            L  L +  +Y   N G+                     D        WR+   QQ QQF
Sbjct: 224 ILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDA-------WRIPPSQQAQQF 283

Query: 236 PILANN----QQPNLLYTFDPPEGATTRYNLNELSRLEME----------NNVGITMAGT 295
           P L N     Q  N LY     EG  +      +   E +          NN+     G 
Sbjct: 284 PFLINTTGLVQSSNALYPL--LEGGVSATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGN 343

Query: 296 VKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLS 308
           + +      N G+N ++   GG+ ++W TG      + +S GHLS
Sbjct: 344 INI------NSGRNEEYTSWGGN-SSW-TGFT----SNNSTGHLS 367

[Close]

BLAST of Carg18315 vs. TAIR10
Match: AT2G28810.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-30
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 59  DRARLAKIPQPEPG-LKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVP 118
           +RARLAK  QP  G LKCPRC+S NTKFCYFNNYNL+QPRHFCK CRRYWTRGGALRNVP
Sbjct: 79  ERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVP 138

Query: 119 VGGGCRRN 126
           VGGGCRRN
Sbjct: 139 VGGGCRRN 146

[Close]

BLAST of Carg18315 vs. TAIR10
Match: AT5G02460.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-29
Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP SM +RARLA IP PE  LKCPRC+S NTKFCYFNNY+L+QPRHFCK CRRYWTRGG
Sbjct: 74  IRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGG 133

Query: 112 ALRNVPVG 120
           ALR+VPVG
Sbjct: 134 ALRSVPVG 141

[Close]

BLAST of Carg18315 vs. TAIR10
Match: AT2G37590.1 (DNA binding with one finger 2.4)

HSP 1 Score: 124.8 bits (312), Expect = 9.3e-29
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IR  SM DRAR A +  PE  LKCPRCES NTKFCYFNNY+L+QPRHFCKTCRRYWTRGG
Sbjct: 68  IRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 127

Query: 112 ALRNVPVG 120
           ALRNVPVG
Sbjct: 128 ALRNVPVG 135

[Close]

BLAST of Carg18315 vs. TAIR10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           I   S T +   + + Q +  LKCPRC SPNTKFCY+NNY+LSQPRHFCK+CRRYWTRGG
Sbjct: 20  ISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGG 79

Query: 112 ALRNVPVGGGCRRNKRAKPQNRS 135
           ALRNVP+GGGCR+ K++   N S
Sbjct: 80  ALRNVPIGGGCRKTKKSIKPNSS 102

[Close]

BLAST of Carg18315 vs. Swiss-Prot
Match: sp|Q9M2U1|DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-33
Identity = 107/285 (37.54%), Postives = 139/285 (48.77%), Query Frame = 0


Query: 56  SMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRN 115
           SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYWTRGG+LRN
Sbjct: 59  SMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRN 118

Query: 116 VPVGGGCRRNKRAKPQNRSK---SPTAGERSSSANSTPAVSLSAQPH-----------LP 175
           VPVGGG RRNKR+K +++S    S        S  S P+ S  ++ H           LP
Sbjct: 119 VPVGGGFRRNKRSKSRSKSTVVVSTDNXXXXXSLTSRPSYSNPSKFHSYGQIPEFNSNLP 178

Query: 176 FLSSLHNFSNY--LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRL---QQPQQF 235
            L  L +  +Y   N G+                     D        WR+   QQ QQF
Sbjct: 179 ILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDA-------WRIPPSQQAQQF 238

Query: 236 PILANN----QQPNLLYTFDPPEGATTRYNLNELSRLEME----------NNVGITMAGT 295
           P L N     Q  N LY     EG  +      +   E +          NN+     G 
Sbjct: 239 PFLINTTGLVQSSNALYPL--LEGGVSATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGN 298

Query: 296 VKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLS 308
           + +      N G+N ++   GG+ ++W TG      + +S GHLS
Sbjct: 299 INI------NSGRNEEYTSWGGN-SSW-TGFT----SNNSTGHLS 322

[Close]

BLAST of Carg18315 vs. Swiss-Prot
Match: sp|Q9ZV33|DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-29
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 59  DRARLAKIPQPEPG-LKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVP 118
           +RARLAK  QP  G LKCPRC+S NTKFCYFNNYNL+QPRHFCK CRRYWTRGGALRNVP
Sbjct: 79  ERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVP 138

Query: 119 VGGGCRRN 126
           VGGGCRRN
Sbjct: 139 VGGGCRRN 146

[Close]

BLAST of Carg18315 vs. Swiss-Prot
Match: sp|Q9LZ56|DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.4e-28
Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP SM +RARLA IP PE  LKCPRC+S NTKFCYFNNY+L+QPRHFCK CRRYWTRGG
Sbjct: 74  IRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGG 133

Query: 112 ALRNVPVG 120
           ALR+VPVG
Sbjct: 134 ALRSVPVG 141

[Close]

BLAST of Carg18315 vs. Swiss-Prot
Match: sp|O80928|DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IR  SM DRAR A +  PE  LKCPRCES NTKFCYFNNY+L+QPRHFCKTCRRYWTRGG
Sbjct: 68  IRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 127

Query: 112 ALRNVPVG 120
           ALRNVPVG
Sbjct: 128 ALRNVPVG 135

[Close]

BLAST of Carg18315 vs. Swiss-Prot
Match: sp|Q9LSL6|DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           I   S T +   + + Q +  LKCPRC SPNTKFCY+NNY+LSQPRHFCK+CRRYWTRGG
Sbjct: 20  ISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGG 79

Query: 112 ALRNVPVGGGCRRNKRAKPQNRS 135
           ALRNVP+GGGCR+ K++   N S
Sbjct: 80  ALRNVPIGGGCRKTKKSIKPNSS 102

[Close]

BLAST of Carg18315 vs. TrEMBL
Match: tr|A0A0A0KQ92|A0A0A0KQ92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182030 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.6e-99
Identity = 231/325 (71.08%), Postives = 244/325 (75.08%), Query Frame = 0


Query: 1   MVFPLDP----PPNWPSFNTQQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVS 60
           MVFP  P    PPNW      Q    XXXXXXXXXXXXXXXXXXXXXXXXXXX  IRPVS
Sbjct: 1   MVFPPLPSYLDPPNWQPLTNHQTGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXGSIRPVS 60

Query: 61  MTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV 120
           MTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV
Sbjct: 61  MTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNV 120

Query: 121 PVGGGCRRNKRAKPQNRSKSPTAGER---SSSANSTPAVSLSAQPHLPFLSSLHNFSNY- 180
           PVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSLHNFS Y 
Sbjct: 121 PVGGGCRRNKRTKSRNRSKSPAASERQLLGGSTNSTAAVSLSTQPHLPFLSSLHNFSTYG 180

Query: 181 LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFD 240
           LNLGI                     D+HEF GDHWRLQ PQQFP+LAN+QQPNLLYTF+
Sbjct: 181 LNLGIIPPQAPPTSGGSAAGGV----DVHEFQGDHWRLQPPQQFPLLANDQQPNLLYTFE 240

Query: 241 PPEGATTRYNLNELSRLEMENNVGITM-AGTVKVEESKAMNLGKNFQFWVGGG---DTNA 300
           PPEGA  RYNL   SRL +EN++G+TM +G VKVEESK MNLGKNFQFWVGGG   D NA
Sbjct: 241 PPEGAMARYNLGGFSRLGIENDIGMTMESGAVKVEESKGMNLGKNFQFWVGGGGGNDVNA 300

Query: 301 ----WSTGADLHSFATSSAGHLSRQ 310
                   ADLH F+++SA HL RQ
Sbjct: 301 XXXXXXXXADLHGFSSASASHLLRQ 321

[Close]

BLAST of Carg18315 vs. TrEMBL
Match: tr|A0A1S3CF93|A0A1S3CF93_CUCME (dof zinc finger protein DOF2.4 OS=Cucumis melo OX=3656 GN=LOC103500213 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 3.7e-96
Identity = 189/270 (70.00%), Postives = 203/270 (75.19%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP+SMTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGG
Sbjct: 58  IRPISMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 117

Query: 112 ALRNVPVGGGCRRNKRAKPQNRSKSPTAGERS---SSANSTPAVSLSAQPHLPFLSSLHN 171
           ALRNVPVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSL N
Sbjct: 118 ALRNVPVGGGCRRNKRTKSRNRSKSPAASERQLLVGSTNSTAAVSLSTQPHLPFLSSLQN 177

Query: 172 FSNY-LNLGIXXXXXXXXXXXXXXXXXXXXPDIHEFHGDHWRLQQPQQFPILANNQQPNL 231
           FS Y LNLGI                     D+HEF GDHWRLQQPQQFP+LAN+QQPNL
Sbjct: 178 FSTYGLNLGIIPPQAPPTSGGSAAGGV----DVHEFQGDHWRLQQPQQFPLLANDQQPNL 237

Query: 232 LYTFDPPEGATTRYNLNELSRLEMENNVGITMAG-TVKVEESKAMNLGKNFQFWVGGG-- 291
           LYTF+PPEGA TRYNL   SRL +EN++G++M G  VKVEESK MNLGKNFQFWVGGG  
Sbjct: 238 LYTFEPPEGAMTRYNLGGFSRLGIENDIGMSMEGEAVKVEESKGMNLGKNFQFWVGGGGX 297

Query: 292 -----DTNAWSTGADLHSFATSSAGHLSRQ 310
                         +LH F++SSA HL RQ
Sbjct: 298 XXVXXXXXXXXXXXELHGFSSSSASHLLRQ 323

[Close]

BLAST of Carg18315 vs. TrEMBL
Match: tr|A0A1U7ZGN7|A0A1U7ZGN7_NELNU (dof zinc finger protein DOF3.6-like OS=Nelumbo nucifera OX=4432 GN=LOC104593818 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 137/289 (47.40%), Postives = 167/289 (57.79%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP S+ DRARLAK PQPE  LKCPRCES NTKFCYFNNY+LSQPRHFCKTCRRYWTRGG
Sbjct: 46  IRPGSVADRARLAKPPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 105

Query: 112 ALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSA---------QP---- 171
           ALRNVPVGGGCRRNKR+K  + SKSP  GER +   ST A+  ++         QP    
Sbjct: 106 ALRNVPVGGGCRRNKRSKGSS-SKSPVTGERHTGPGSTSAIPANSCTTDIIGHIQPTPPL 165

Query: 172 HLPFLSSLHNFSNYL--NLGIXXXXXXXXXXXXXXXXXXXXP-DIHEFHG---------- 231
            LPF+SSLH+ + Y   ++G+        XXXXXXXXXX     I  + G          
Sbjct: 166 QLPFISSLHHLTEYAPPDIGLNFSGIHPPXXXXXXXXXXDMDFQIASYSGGGSSILSSGS 225

Query: 232 -DHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTRYNLNELSRLEMENNVGITMAGTVK 291
            + WRLQQ QQFP L   +    LY F+      + Y           +  G+T   +VK
Sbjct: 226 AEQWRLQQVQQFPFLTGLEPSAGLYPFEGESAEPSAYAGGASQLRTKPSGSGVTQLASVK 285

Query: 292 VEESKAMNLGKNF-------QFWVGGGDTNAWSTGADLHSFATSSAGHL 307
           +EE+  +NL + F       Q+W     +NAW+   DL  F +SS  HL
Sbjct: 286 MEENHGLNLSRQFLGIPGNDQYW----GSNAWT---DLSGFNSSSNSHL 326

[Close]

BLAST of Carg18315 vs. TrEMBL
Match: tr|A0A061FMB5|A0A061FMB5_THECC (F-box family protein, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_042784 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48
Identity = 133/300 (44.33%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP SM +RARLAKIPQPE  L+CPRCES NTKFCYFNNY+LSQPRHFCKTCRRYWTRGG
Sbjct: 52  IRPGSMAERARLAKIPQPEVALECPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 111

Query: 112 ALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSS-----------------ANSTPAVSL 171
           ALRNVPVGGGCRRNKR+K  NRSKSP   ER                     + TP    
Sbjct: 112 ALRNVPVGGGCRRNKRSKGSNRSKSPAVSERQXXXXXXXXXXXXXXCTDMLGHMTP---- 171

Query: 172 SAQPHLPFLSSLHNFSNYLN--LGIXXXXXXXXXXXXXXXXXXXXPDIHEFH-------- 231
            A P LP L  LH+  +Y +  +GI                        +FH        
Sbjct: 172 -APPQLPLLPPLHHLGDYNSGVIGINFGGIQAQVAAAIGGTGGTSASNMDFHIGTSSSGG 231

Query: 232 --------GDHWR-LQQPQQFPILANNQQPNLLYTFDPPEGATTRYNLNELSRLEMENNV 291
                    + WR LQQ QQFP L++ + P  LY F+  EG        +L    +E+  
Sbjct: 232 GSMLTNGLVEQWRSLQQVQQFPFLSSLEPPAGLYPFE-SEGVEAPSYGGQLRSKPLES-- 291

Query: 292 GITMAGTVKVEES--KAMNLGKNF-------QFWVGGGDTNAWSTGADLHSFATSSAGHL 307
            IT    +K+EE+  + +NL +NF       Q+W GGG  NAW+   DL  F +SS  HL
Sbjct: 292 AITQLAAIKMEETHHQGLNLSRNFLGISGSDQYW-GGGGGNAWT---DLSGFTSSSTSHL 339

[Close]

BLAST of Carg18315 vs. TrEMBL
Match: tr|A0A061FLM3|A0A061FLM3_THECC (F-box family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_042784 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48
Identity = 133/300 (44.33%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 52  IRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGG 111
           IRP SM +RARLAKIPQPE  L+CPRCES NTKFCYFNNY+LSQPRHFCKTCRRYWTRGG
Sbjct: 52  IRPGSMAERARLAKIPQPEVALECPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 111

Query: 112 ALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSS-----------------ANSTPAVSL 171
           ALRNVPVGGGCRRNKR+K  NRSKSP   ER                     + TP    
Sbjct: 112 ALRNVPVGGGCRRNKRSKGSNRSKSPAVSERQXXXXXXXXXXXXXXCTDMLGHMTP---- 171

Query: 172 SAQPHLPFLSSLHNFSNYLN--LGIXXXXXXXXXXXXXXXXXXXXPDIHEFH-------- 231
            A P LP L  LH+  +Y +  +GI                        +FH        
Sbjct: 172 -APPQLPLLPPLHHLGDYNSGVIGINFGGIQAQVAAAIGGTGGTSASNMDFHIGTSSSGG 231

Query: 232 --------GDHWR-LQQPQQFPILANNQQPNLLYTFDPPEGATTRYNLNELSRLEMENNV 291
                    + WR LQQ QQFP L++ + P  LY F+  EG        +L    +E+  
Sbjct: 232 GSMLTNGLVEQWRSLQQVQQFPFLSSLEPPAGLYPFE-SEGVEAPSYGGQLRSKPLES-- 291

Query: 292 GITMAGTVKVEES--KAMNLGKNF-------QFWVGGGDTNAWSTGADLHSFATSSAGHL 307
            IT    +K+EE+  + +NL +NF       Q+W GGG  NAW+   DL  F +SS  HL
Sbjct: 292 AITQLAAIKMEETHHQGLNLSRNFLGISGSDQYW-GGGGGNAWT---DLSGFTSSSTSHL 339

The following BLAST results are available for this feature:

BLAST of Carg18315 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941607.1	3.9e-142	99.35	dof zinc finger protein DOF3.6-like [Cucurbita moschata]	[more]
XP_023546231.1	6.7e-134	94.52	dof zinc finger protein DOF2.2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992301.1	9.7e-133	92.26	dof zinc finger protein DOF3.6-like [Cucurbita maxima]	[more]
XP_004147691.1	5.4e-99	71.08	PREDICTED: dof zinc finger protein DOF2.4 [Cucumis sativus] >KGN50547.1 hypothet...	[more]
XP_008461665.1	5.6e-96	70.00	PREDICTED: dof zinc finger protein DOF2.4 [Cucumis melo]	[more]

BLAST of Carg18315 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55370.3	3.3e-34	37.54	OBF-binding protein 3	[more]
AT2G28810.1	3.8e-30	85.29	Dof-type zinc finger DNA-binding family protein	[more]
AT5G02460.1	1.9e-29	80.88	Dof-type zinc finger DNA-binding family protein	[more]
AT2G37590.1	9.3e-29	80.88	DNA binding with one finger 2.4	[more]
AT5G65590.1	2.1e-28	63.86	Dof-type zinc finger DNA-binding family protein	[more]

BLAST of Carg18315 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2U1\|DOF36_ARATH	6.0e-33	37.54	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV...	[more]
sp\|Q9ZV33\|DOF22_ARATH	6.8e-29	85.29	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]
sp\|Q9LZ56\|DOF51_ARATH	3.4e-28	80.88	Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV...	[more]
sp\|O80928\|DOF24_ARATH	1.7e-27	80.88	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]
sp\|Q9LSL6\|DOF57_ARATH	3.7e-27	63.86	Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV...	[more]

BLAST of Carg18315 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQ92\|A0A0A0KQ92_CUCSA	3.6e-99	71.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182030 PE=4 SV=1	[more]
tr\|A0A1S3CF93\|A0A1S3CF93_CUCME	3.7e-96	70.00	dof zinc finger protein DOF2.4 OS=Cucumis melo OX=3656 GN=LOC103500213 PE=4 SV=1	[more]
tr\|A0A1U7ZGN7\|A0A1U7ZGN7_NELNU	2.2e-48	47.40	dof zinc finger protein DOF3.6-like OS=Nelumbo nucifera OX=4432 GN=LOC104593818 ...	[more]
tr\|A0A061FMB5\|A0A061FMB5_THECC	2.9e-48	44.33	F-box family protein, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_04278...	[more]
tr\|A0A061FLM3\|A0A061FLM3_THECC	2.9e-48	44.33	F-box family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_04278...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003851	Znf_Dof

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18315-RA	Carg18315-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 73..127 e-value: 5.6E-32 score: 109.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 75..111
IPR003851	Zinc finger, Dof-type	PRODOM	PD007478		coord: 53..127 e-value: 7.0E-37 score: 387.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 73..127 score: 29.609
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..152
None	No IPR available	PANTHER	PTHR31992	FAMILY NOT NAMED	coord: 23..226
None	No IPR available	PANTHER	PTHR31992:SF66	DOF ZINC FINGER PROTEIN DOF1.1-RELATED	coord: 23..226

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18315	Cla004013	Watermelon (97103) v1	carwmB0087
Carg18315	Csa5G182030	Cucumber (Chinese Long) v2	carcuB0098
Carg18315	MELO3C023853	Melon (DHL92) v3.5.1	carmeB0089
Carg18315	ClCG07G003310	Watermelon (Charleston Gray)	carwcgB0090
Carg18315	CSPI05G09640	Wild cucumber (PI 183967)	carcpiB0102
Carg18315	Cucsa.165340	Cucumber (Gy14) v1	carcgyB0108
Carg18315	CmaCh04G011880	Cucurbita maxima (Rimu)	carcmaB0116
Carg18315	CmaCh04G002190	Cucurbita maxima (Rimu)	carcmaB0115
Carg18315	CmoCh04G012620	Cucurbita moschata (Rifu)	carcmoB0124
Carg18315	CmoCh04G002210	Cucurbita moschata (Rifu)	carcmoB0123
Carg18315	Lsi04G008820	Bottle gourd (USVL1VR-Ls)	carlsiB080
Carg18315	Cp4.1LG01g04810	Cucurbita pepo (Zucchini)	carcpeB0130
Carg18315	Cp4.1LG01g10780	Cucurbita pepo (Zucchini)	carcpeB0131
Carg18315	CsGy5G006970	Cucumber (Gy14) v2	carcgybB0098
Carg18315	MELO3C023853.2	Melon (DHL92) v3.6.1	carmedB0091
Carg18315	CsaV3_5G008060	Cucumber (Chinese Long) v3	carcucB0105
Carg18315	Cla97C07G131620	Watermelon (97103) v2	carwmbB0091
Carg18315	Bhi07G000776	Wax gourd	carwgoB0104

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18315	Carg00269	Silver-seed gourd	carcarB099

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18315	Watermelon (97103) v2	carwmbB0089
Carg18315	Watermelon (97103) v2	carwmbB0090
Carg18315	Wax gourd	carwgoB0102