Carg18267 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18267
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_120 : 311505 .. 313631 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCATCTTCCCCTTCTTCTGCTCGAACTCCCACTCGCTCAACCTCAATCTCTCACGCTCGGTTCAACAATCCCTCACCGGAACCGTCGAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATTATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTGGAGGACGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCTTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCTTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCTGATGAGTTTTTGCAGATAGCGAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAGATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTTTTATGTTTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTTCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAATGAAATCATAGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCTGATGCAGCGAGAAGGCTGTTAGATGAGATGATATCTTATGGAGCATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGAGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAGGAGGTTGCCAGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTATCATTTTGAAACATTCAACTTTGTCTAAACTAAAACAGAGCCTTTTTGAAGTTAGGAAGGAATTTATGTACGACGAGCTAATGATGAAGTTGAAATTTAGTGAGAGATAAGAATTTTGGTGCTTCTAACCTCTGCATATCTTTTTCCTATGGGTTATAGAGATGATATATTTGGGGCTCGGATCGGGCGTGCATTCTGAAATGTATCGATTTCTGTGGAATCTTCTGCTGTTTTCAATGAACATGTAGATGTCTGTGAAGTGTTCTAGTACAAAACAAGAAACTGTTGTAGCATGTTTTTCCATCTCATTGGAAGGGAAGCATTTTGTGGAGTTGGAGAGTGATGATAATTGGTATAAGGAGAGAAAATCTGTACTTTTTGATACCAAAAGAAGAGAGTATCACAGAGAAGGCTTCTCTGTTACTTTCCTTGAATAGAACATAGATATCTGTTTGTGGTGCCTCTCCTATGAAGGGATTTTCTTGTAGTTCTTGGAAGGTCATAACGAACATGAAGAGAAGAATTTCCAAGAAGATTATTTTTGTCTTTTTTTTTTTTGCTGGGAAGGTCATATTCAGGAGAAGTGCAACACTGTGATCGTATTCAGTTGTCCTGTGATCGATTTCGGCCGTTCTGGAATCAGCTCATTTAGAGATGAGATGTCGAGAGGCATGGGAGAGGTATGA

mRNA sequence

ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCATCTTCCCCTTCTTCTGCTCGAACTCCCACTCGCTCAACCTCAATCTCTCACGCTCGGTTCAACAATCCCTCACCGGAACCGTCGAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATTATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTGGAGGACGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCTTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCTTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCTGATGAGTTTTTGCAGATAGCGAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAGATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTTTTATGTTTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTTCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAATGAAATCATAGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCTGATGCAGCGAGAAGGCTGTTAGATGAGATGATATCTTATGGAGCATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGAGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAGGAGGTTGCCAGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTCATATTCAGGAGAAGTGCAACACTGTGATCGTATTCAGTTGTCCTGTGATCGATTTCGGCCGTTCTGGAATCAGCTCATTTAGAGATGAGATGTCGAGAGGCATGGGAGAGGTATGA

Coding sequence (CDS)

ATGGGAGAGAACAACAAAAGACGACTCTCCGACAATGGCCACCAACGAAGCAAGAAGCATCAATCTTCATCTTCCCCTTCTTCTGCTCGAACTCCCACTCGCTCAACCTCAATCTCTCACGCTCGGTTCAACAATCCCTCACCGGAACCGTCGAGGAGCAAAACCCCACATTTCGTTTCGTATCTCGACTTCCCTAATTTGCCCTTCAAAATTAAATTACTGTGTGAAATTATCGCCAACGCCTCATCGATTGATCTCGAAATCGTTCTGGAAGAGACCGGTGTTCAGGTTAGTCGAGAAGATGTGGAGGACGTTCTGAAATTATCTTACAAGTTTCCGGGATCATCCATGAAGTTCTTCCGGTGGTCTGGCCGGAAACTCAACGACCAACACAGTCCTTATGCGTGGAATTTGATCGTCGACATGTTGGGTAAGAATTTACATTTTGAACCAATGTGGGATGCTATGAAATCGATGAAGAACGAAGGGTTGATTTCTTTGGCTACTTTTGCTTCTGTGTTTAGTAGTTATATAGTTGCTAATCGTGTTAAGGATGCCATTGTGTCATTTGAGGTTATGGATCTTTATGGTTGTCCTCGTGATGTAGTGGCATTGAATTCACTTCTAAGTGCTATATGTAGGGATGGAAACACCAAGGATGCTGATGAGTTTTTGCAGATAGCGAAAGGTAAAATTAGGCCTGACCCTGATTCTTATGCCATTGTATTAGAAGGATGGGAAAGTGAAGGAAATATAGTCTGTGCCAGACAAACCTTTGTAGAGATGATAGAACAGATTGGTTGGGATCCCACCAATACCCCTGCTTATAATTCCTTTTTATGTTTATTGCTCAAGGACCCCAATGGGCTGCACGAGGCATTGATGTTCTTCAAGAGATTGAAAGATAAGATGTGCTATCCGGGATTTAAGTTTTTCAAGCTTGCCCTTGATGAGTGTGCGAAGAATCGCGATGTCAAAGCGGGGAAGTATCTTTGGAATGAAATCATAGAGAGTATTAATTTTCAGCCCGATACACATATGTACAATTCGATGATTGTTCTATGTTGCCATCAAAACGACGCTGATGCAGCGAGAAGGCTGTTAGATGAGATGATATCTTATGGAGCATTCCCGAATTTGGAAACTTACAATTTGTTATTTCGGTTCTTGTTAAAGGAAAAGAAATTGAGAGAGGCTTCAAGTATATTTGATGAAATGGTTAAAAATGAGTTTGTTCCAAGCCATGCTAATTGTAAAGCAGCAGTCAGGATTTACATTGAAAATGAAGACCCAAATGGAGCCATAAAAGTATGGAAATGTATGGTTAAAATTTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTGATTGTAGGGCTCCAAGATCAAAGGAGGTTGCCAGAAGCAGTCAAGTATGCTAATGAGATGATTGATAGAGGTCATATTCAGGAGAAGTGCAACACTGTGATCGTATTCAGTTGTCCTGTGATCGATTTCGGCCGTTCTGGAATCAGCTCATTTAGAGATGAGATGTCGAGAGGCATGGGAGAGGTATGA

Protein sequence

MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHARFNNPSPEPSRSKTPHFVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRGHIQEKCNTVIVFSCPVIDFGRSGISSFRDEMSRGMGEV

Homology

[Close]

BLAST of Carg18267 vs. NCBI nr
Match: XP_022963446.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 958.7 bits (2477), Expect = 7.8e-276
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480

Query: 481 HI 483
            I
Sbjct: 481 II 482

[Close]

BLAST of Carg18267 vs. NCBI nr
Match: XP_022990962.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 939.5 bits (2427), Expect = 4.9e-270
Identity = 459/482 (95.23%), Postives = 467/482 (96.89%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKKHQ         TPTRSTSISH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKHQSSSSPSSARTPTRSTSISHPRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVD+LGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDILGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAI+SFEVMD YGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIMSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLC+LLKDPNGLHEALM FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIVESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARR+LDEMISYG FPNLETYNLLFR+LLKEKKLREASSIFDEM+KNEFVPSHANCKA
Sbjct: 361 ADAARRVLDEMISYGTFPNLETYNLLFRYLLKEKKLREASSIFDEMIKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEI NFLIVGLQDQ+RLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIANFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 HI 483
            I
Sbjct: 481 II 482

[Close]

BLAST of Carg18267 vs. NCBI nr
Match: XP_023511926.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023511935.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 920.6 bits (2378), Expect = 2.3e-264
Identity = 463/482 (96.06%), Postives = 466/482 (96.68%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSDNGHQRSKK  XXXXXXXXX        SH RFNNPSPEPSRSKTPHFVS
Sbjct: 1   MGENNKRRLSDNGHQRSKKXXXXXXXXXXXXXXXXXXTSHTRFNNPSPEPSRSKTPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF
Sbjct: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           NRVKDAIVSFEVMD YGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA
Sbjct: 181 NRVKDAIVSFEVMDRYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300
           IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLC+LLKDPNGLHEALM FKRL
Sbjct: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCVLLKDPNGLHEALMSFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFKLALDECAKNRDVKAGKYLW EI+ESINFQPDTHMYNSMIVLCCHQND
Sbjct: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWKEIMESINFQPDTHMYNSMIVLCCHQND 360

Query: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
           ADAARRLLDEMISYG FPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA
Sbjct: 361 ADAARRLLDEMISYGTFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480
           AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQ+RLPEAVKYANEMIDRG
Sbjct: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQKRLPEAVKYANEMIDRG 480

Query: 481 HI 483
            I
Sbjct: 481 II 482

[Close]

BLAST of Carg18267 vs. NCBI nr
Match: XP_022141574.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momordica charantia])

HSP 1 Score: 796.2 bits (2055), Expect = 6.7e-227
Identity = 389/480 (81.04%), Postives = 434/480 (90.42%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKHQXXXXXXXXXTPTRSTSISHARFNNPSPEPSRSKTPHFVS 60
           MGENNKRRLSD+         XXXXXXXXX           +F+ PSPE  R+K PHFVS
Sbjct: 1   MGENNKRRLSDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQFHGPSPERQRNKIPHFVS 60

Query: 61  YLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFF 120
           YL+FPNLPFK+KLLCEIIAN+ SID+E +LE+TGVQV++EDVE+VLKLSYKFPGSS+KFF
Sbjct: 61  YLEFPNLPFKVKLLCEIIANSPSIDVERILEDTGVQVTQEDVEEVLKLSYKFPGSSVKFF 120

Query: 121 RWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVA 180
           RWSGRKLNDQHSPYAWNLI+DMLGKNL+FEPMWDAMKSMK EGL+SLATFASVFSSYIVA
Sbjct: 121 RWSGRKLNDQHSPYAWNLIIDMLGKNLYFEPMWDAMKSMKKEGLLSLATFASVFSSYIVA 180

Query: 181 NRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYA 240
           N VKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDA EFLQIAK KIRPDPDSYA
Sbjct: 181 NCVKDAIMTFEVMDSYGCPHDVVALNSLLSAICRDGNTKDAYEFLQIAKDKIRPDPDSYA 240

Query: 241 IVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFFKRL 300
           I+LEGWE+EGN+VC++QTF EM+E+IGWDPTNTPAYNSFLC+LLK P+GLHEAL FFKRL
Sbjct: 241 ILLEGWETEGNVVCSKQTFGEMVEEIGWDPTNTPAYNSFLCVLLKGPDGLHEALRFFKRL 300

Query: 301 KDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCHQND 360
           KDKMCYPGFKFFK+ALDEC KN D KA  YLWNE++ESINFQPDTHMYNSMIV+CCHQND
Sbjct: 301 KDKMCYPGFKFFKVALDECVKNGDAKAASYLWNEVLESINFQPDTHMYNSMIVICCHQND 360

Query: 361 ADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHANCKA 420
            DAARRLLD+MI YGAFP++ETYNLLF+FLLK +KLR+AS+IFDEM+KNEFVPS ANC A
Sbjct: 361 TDAARRLLDQMICYGAFPDMETYNLLFQFLLKSRKLRDASAIFDEMIKNEFVPSRANCNA 420

Query: 421 AVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMIDRG 480
           AVRIYIE+EDPNGAIKVWKCM+K YESDLE+IGNFLIVGLQDQ+RLPEAVKYA+EMIDRG
Sbjct: 421 AVRIYIESEDPNGAIKVWKCMLKSYESDLEDIGNFLIVGLQDQKRLPEAVKYAHEMIDRG 480

[Close]

BLAST of Carg18267 vs. NCBI nr
Match: XP_004140363.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucumis sativus] >KGN51046.1 hypothetical protein Csa_5G420290 [Cucumis sativus])

HSP 1 Score: 781.6 bits (2017), Expect = 1.7e-222
Identity = 377/482 (78.22%), Postives = 430/482 (89.21%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKH-QXXXXXXXXXTPTRSTSISH-ARFNNPSPE-PSRSKTPH 60
           MGE NKRRLSD+ HQRSKKH        XXX       +SH   F+NPSP  P ++ TPH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSXXXXXXXXXXLSHQTHFHNPSPHPPHKNSTPH 60

Query: 61  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 120
           F+SYLDFPNLPF+IKL+CEIIAN+ S+D+E  LE+TG+  +++DVE+VLKLSY+FPGSS+
Sbjct: 61  FLSYLDFPNLPFQIKLMCEIIANSPSLDVEKALEDTGIHATQQDVEEVLKLSYRFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLI+DMLGKNL+F+PMWDAMKSMK+EGL+SLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAMKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 240
           +VANRVKDAI++FEVMD YGCP DVVA NSLLSAICRDGNTKDADEFLQIAK KIRPD D
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVAFNSLLSAICRDGNTKDADEFLQIAKRKIRPDLD 240

Query: 241 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFF 300
           SYAIVLEGWESEGN VCA+QTF EMIE+IGWDPTNTPAYNSFLC+LL+DPNGL  AL+ F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCH 360
           +RLKDKMCYPGFKFFKLALDEC K  D+K+GKYLWNEII+SINFQPDT+M+NSMI LCCH
Sbjct: 301 QRLKDKMCYPGFKFFKLALDECIKCGDIKSGKYLWNEIIQSINFQPDTYMFNSMIALCCH 360

Query: 361 QNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 420
           QND D ARRLLDEMI +GAFPN ETYNLLF+FLLK +KLR+AS+IFDEM+KNEF+PSHAN
Sbjct: 361 QNDTDEARRLLDEMICFGAFPNAETYNLLFQFLLKGRKLRDASAIFDEMIKNEFIPSHAN 420

Query: 421 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMI 480
           C AA+RIYIE++DPNGAIKVWKCM+K Y+SDLEE GNFLIV LQDQ+RLPEAVKYA+EM+
Sbjct: 421 CNAAIRIYIESQDPNGAIKVWKCMLKNYDSDLEETGNFLIVRLQDQKRLPEAVKYAHEMV 480

[Close]

BLAST of Carg18267 vs. TAIR10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-24
Identity = 52/170 (30.59%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 72  KLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQH 131
           K + +++ ++  + L+  L+++G++VS+E VEDVL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFE 191
           S  A++++++   K   ++ MWD + +M+ + ++++ TF  V   Y  A +V +AI +F 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAI 242
           VM+ Y  P ++VA N LLSA+C+  N + A E  +  + +  PD  +Y+I
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSI 242

[Close]

BLAST of Carg18267 vs. TAIR10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-16
Identity = 49/197 (24.87%), Postives = 97/197 (49.24%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 299 MTYTVLLNGWCRVRNLI 315

[Close]

BLAST of Carg18267 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-16
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 299 MTYTVLLNGWCRVRNLI 315

[Close]

BLAST of Carg18267 vs. TAIR10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-16
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 298 MTYTVLLNGWCRVRNLI 314

[Close]

BLAST of Carg18267 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-16
Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 116 SMKFFRW-SGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGL-ISLATFASV 175
           S+ FF W + R   D  SP+ +N ++D+ GK   F+  W  +  MK+  + IS+ TF  +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 176 FSSYIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIR 235
              Y+ A    +A+  F  M+ YGC  D +A + ++S + R     +A  F    K +  
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 236 PDPDSYAIVLEGWESEGNIVCARQTFVEM 263
           PD   Y  ++ GW   G I  A + F EM
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEM 281

[Close]

BLAST of Carg18267 vs. Swiss-Prot
Match: sp|Q9FVX2|PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 9.4e-23
Identity = 52/170 (30.59%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 72  KLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSMKFFRWSGRKLNDQH 131
           K + +++ ++  + L+  L+++G++VS+E VEDVL         + +FF+WS ++ + +H
Sbjct: 73  KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132

Query: 132 SPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSYIVANRVKDAIVSFE 191
           S  A++++++   K   ++ MWD + +M+ + ++++ TF  V   Y  A +V +AI +F 
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192

Query: 192 VMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPDSYAI 242
           VM+ Y  P ++VA N LLSA+C+  N + A E  +  + +  PD  +Y+I
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSI 242

[Close]

BLAST of Carg18267 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.2e-15
Identity = 49/197 (24.87%), Postives = 97/197 (49.24%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H+   +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 299 MTYTVLLNGWCRVRNLI 315

[Close]

BLAST of Carg18267 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.5e-15
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 119 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 178

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 179 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 238

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 299 MTYTVLLNGWCRVRNLI 315

[Close]

BLAST of Carg18267 vs. Swiss-Prot
Match: sp|Q9LEQ7|PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.5e-15
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 0


Query: 59  VSYLDFPNLPFKIKLLCEIIANASSID--LEIVLEETGVQVSREDVEDVLKLSYKFPGSS 118
           VS ++    P +++ +C++I    ++D  +E VL+E  + +S + + +VL+        +
Sbjct: 118 VSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPA 177

Query: 119 MKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSS 178
            +FF W+  +    H    +N ++ +L K   FE M   ++ M  +GL+++ TF     +
Sbjct: 178 FRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA 237

Query: 179 YIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDP 238
           +  A   K A+  FE+M  Y     V  +N LL ++ R    K+A       K +  P+ 
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297

Query: 239 DSYAIVLEGWESEGNIV 254
            +Y ++L GW    N++
Sbjct: 298 MTYTVLLNGWCRVRNLI 314

[Close]

BLAST of Carg18267 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-15
Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 116 SMKFFRW-SGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGL-ISLATFASV 175
           S+ FF W + R   D  SP+ +N ++D+ GK   F+  W  +  MK+  + IS+ TF  +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192

Query: 176 FSSYIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIR 235
              Y+ A    +A+  F  M+ YGC  D +A + ++S + R     +A  F    K +  
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252

Query: 236 PDPDSYAIVLEGWESEGNIVCARQTFVEM 263
           PD   Y  ++ GW   G I  A + F EM
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEM 281

[Close]

BLAST of Carg18267 vs. TrEMBL
Match: tr|A0A0A0KTM8|A0A0A0KTM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420290 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.1e-222
Identity = 377/482 (78.22%), Postives = 430/482 (89.21%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKH-QXXXXXXXXXTPTRSTSISH-ARFNNPSPE-PSRSKTPH 60
           MGE NKRRLSD+ HQRSKKH        XXX       +SH   F+NPSP  P ++ TPH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPSSXXXXXXXXXXLSHQTHFHNPSPHPPHKNSTPH 60

Query: 61  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 120
           F+SYLDFPNLPF+IKL+CEIIAN+ S+D+E  LE+TG+  +++DVE+VLKLSY+FPGSS+
Sbjct: 61  FLSYLDFPNLPFQIKLMCEIIANSPSLDVEKALEDTGIHATQQDVEEVLKLSYRFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLI+DMLGKNL+F+PMWDAMKSMK+EGL+SLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAMKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 240
           +VANRVKDAI++FEVMD YGCP DVVA NSLLSAICRDGNTKDADEFLQIAK KIRPD D
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVAFNSLLSAICRDGNTKDADEFLQIAKRKIRPDLD 240

Query: 241 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFF 300
           SYAIVLEGWESEGN VCA+QTF EMIE+IGWDPTNTPAYNSFLC+LL+DPNGL  AL+ F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCH 360
           +RLKDKMCYPGFKFFKLALDEC K  D+K+GKYLWNEII+SINFQPDT+M+NSMI LCCH
Sbjct: 301 QRLKDKMCYPGFKFFKLALDECIKCGDIKSGKYLWNEIIQSINFQPDTYMFNSMIALCCH 360

Query: 361 QNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 420
           QND D ARRLLDEMI +GAFPN ETYNLLF+FLLK +KLR+AS+IFDEM+KNEF+PSHAN
Sbjct: 361 QNDTDEARRLLDEMICFGAFPNAETYNLLFQFLLKGRKLRDASAIFDEMIKNEFIPSHAN 420

Query: 421 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMI 480
           C AA+RIYIE++DPNGAIKVWKCM+K Y+SDLEE GNFLIV LQDQ+RLPEAVKYA+EM+
Sbjct: 421 CNAAIRIYIESQDPNGAIKVWKCMLKNYDSDLEETGNFLIVRLQDQKRLPEAVKYAHEMV 480

[Close]

BLAST of Carg18267 vs. TrEMBL
Match: tr|A0A1S3CCN3|A0A1S3CCN3_CUCME (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103499319 PE=4 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 9.9e-203
Identity = 356/482 (73.86%), Postives = 404/482 (83.82%), Query Frame = 0


Query: 1   MGENNKRRLSDNGHQRSKKH--QXXXXXXXXXTPTRSTSISHARFNNPSPE-PSRSKTPH 60
           MGE NKRRLSD+ HQRSKKH      XXXXXX            F+NPSP+ P ++ TPH
Sbjct: 1   MGETNKRRLSDHTHQRSKKHLPSSSPXXXXXXXXXXXXXXXQTHFHNPSPQPPHKNSTPH 60

Query: 61  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 120
           F+SYLDFPNLPFKIKL+CEIIAN+ S+++E  LE+TG+ V++EDVE+VLKLSY FPGSS+
Sbjct: 61  FLSYLDFPNLPFKIKLMCEIIANSPSLNVEKALEDTGIHVTQEDVEEVLKLSYSFPGSSV 120

Query: 121 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 180
           KFFRWSGRKLNDQHSPYAWNLI+DMLGKNL+F+PMWDA+KSMK+EGL+SLATFASVFSSY
Sbjct: 121 KFFRWSGRKLNDQHSPYAWNLIIDMLGKNLYFDPMWDAIKSMKSEGLLSLATFASVFSSY 180

Query: 181 IVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 240
           +VANRVKDAI++FEVMD YGCP DVVALNSLLSAICRDGNTKDADEFLQIAK KIRPDPD
Sbjct: 181 VVANRVKDAIMAFEVMDTYGCPHDVVALNSLLSAICRDGNTKDADEFLQIAKRKIRPDPD 240

Query: 241 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFF 300
           SYAIVLEGWESEGN VCA+QTF EMIE+IGWDPTNTPAYNSFLC+LL+DPNGL  AL+ F
Sbjct: 241 SYAIVLEGWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTF 300

Query: 301 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCH 360
           +RLKDKMCYPGFKFFKLALDEC K  D+KAGKYL                          
Sbjct: 301 ERLKDKMCYPGFKFFKLALDECVKCGDIKAGKYLXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 QNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 420
               D ARRLLDEMI YGAFPN ETYNLLF+FLLK +KLR+AS+I DEM+KNEF+PSHAN
Sbjct: 361 XXXXDEARRLLDEMICYGAFPNAETYNLLFQFLLKGRKLRDASAILDEMIKNEFIPSHAN 420

Query: 421 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMI 480
           C AA+RIYIE++DPNGA+KVWKCM+K Y+SDLEE GNFLIV LQDQ+RLPEAVKYA+EM+
Sbjct: 421 CTAAIRIYIESQDPNGALKVWKCMLKNYDSDLEETGNFLIVWLQDQKRLPEAVKYAHEMM 480

[Close]

BLAST of Carg18267 vs. TrEMBL
Match: tr|M5WTJ7|M5WTJ7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005397mg PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.2e-161
Identity = 269/427 (63.00%), Postives = 340/427 (79.63%), Query Frame = 0


Query: 54  KTPHFVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFP 113
           K P F SYLD PNLP KI+LLCEI+A   ++ +E  L ET V+V++EDVE+VLKLSY FP
Sbjct: 3   KRPTFASYLDTPNLPPKIRLLCEIVAKTHTLSVEERLAETSVRVTQEDVEEVLKLSYAFP 62

Query: 114 GSSMKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASV 173
           G ++KFFRW+G  LND HSPYAWNL+VD+LGKN  F+ MWDA+KSM+ E L+SLATFASV
Sbjct: 63  GPAVKFFRWAGHHLNDYHSPYAWNLVVDLLGKNCFFDAMWDAIKSMRKERLLSLATFASV 122

Query: 174 FSSYIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIR 233
           FSSY++ANRV++A ++FEVM  YGCPRD+VALNSLLSAICRDG T DA +FL+IAK KI+
Sbjct: 123 FSSYVIANRVQEAFMTFEVMSEYGCPRDIVALNSLLSAICRDGKTSDAVDFLRIAKDKIK 182

Query: 234 PDPDSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEA 293
           PDPD+YAI+LEGWE+EGN+ CARQ F EM+ +IGWDP+N PAY+SFL  LLK P+G+ EA
Sbjct: 183 PDPDTYAILLEGWENEGNVACARQVFSEMVIEIGWDPSNVPAYDSFLNTLLKGPDGIREA 242

Query: 294 LMFFKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIV 353
           + FF+ LKD+ CYPG KFF+LALDEC KN D +  + LW+ ++  I FQPDT+M N MI 
Sbjct: 243 VKFFETLKDRRCYPGVKFFRLALDECVKNSDSRGAEALWHAMVGIIGFQPDTNMCNLMIS 302

Query: 354 LCCHQNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVP 413
           L C + + D A+R+LD+M+  GAFPN +TY++LF+ L+K +KL+EAS +F EMVKNE VP
Sbjct: 303 LHCREGNPDLAKRMLDDMVYNGAFPNSQTYDMLFKSLIKNRKLKEASILFTEMVKNECVP 362

Query: 414 SHANCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYA 473
            HANC  AVR +++  DP  AIKVWKCM++ Y S LE+ GN L+VGL D  R+PEAVKYA
Sbjct: 363 EHANCNMAVRTFLDLGDPYFAIKVWKCMLENYHSGLEDTGNLLVVGLGDLNRVPEAVKYA 422

Query: 474 NEMIDRG 481
            +MI RG
Sbjct: 423 EDMIVRG 429

[Close]

BLAST of Carg18267 vs. TrEMBL
Match: tr|A0A251Q218|A0A251Q218_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G160100 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.7e-160
Identity = 267/423 (63.12%), Postives = 338/423 (79.91%), Query Frame = 0


Query: 58  FVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFPGSSM 117
           F SYLD PNLP KI+LLCEI+A   ++ +E  L ET V+V++EDVE+VLKLSY FPG ++
Sbjct: 79  FASYLDTPNLPPKIRLLCEIVAKTHTLSVEERLAETSVRVTQEDVEEVLKLSYAFPGPAV 138

Query: 118 KFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASVFSSY 177
           KFFRW+G  LND HSPYAWNL+VD+LGKN  F+ MWDA+KSM+ E L+SLATFASVFSSY
Sbjct: 139 KFFRWAGHHLNDYHSPYAWNLVVDLLGKNCFFDAMWDAIKSMRKERLLSLATFASVFSSY 198

Query: 178 IVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIRPDPD 237
           ++ANRV++A ++FEVM  YGCPRD+VALNSLLSAICRDG T DA +FL+IAK KI+PDPD
Sbjct: 199 VIANRVQEAFMTFEVMSEYGCPRDIVALNSLLSAICRDGKTSDAVDFLRIAKDKIKPDPD 258

Query: 238 SYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEALMFF 297
           +YAI+LEGWE+EGN+ CARQ F EM+ +IGWDP+N PAY+SFL  LLK P+G+ EA+ FF
Sbjct: 259 TYAILLEGWENEGNVACARQVFSEMVIEIGWDPSNVPAYDSFLNTLLKGPDGIREAVKFF 318

Query: 298 KRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIVLCCH 357
           + LKD+ CYPG KFF+LALDEC KN D +  + LW+ ++  I FQPDT+M N MI L C 
Sbjct: 319 ETLKDRRCYPGVKFFRLALDECVKNSDSRGAEALWHAMVGIIGFQPDTNMCNLMISLHCR 378

Query: 358 QNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVPSHAN 417
           + + D A+R+LD+M+  GAFPN +TY++LF+ L+K +KL+EAS +F EMVKNE VP HAN
Sbjct: 379 EGNPDLAKRMLDDMVYNGAFPNSQTYDMLFKSLIKNRKLKEASILFTEMVKNECVPEHAN 438

Query: 418 CKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYANEMI 477
           C  AVR +++  DP  AIKVWKCM++ Y S LE+ GN L+VGL D  R+PEAVKYA +MI
Sbjct: 439 CNMAVRTFLDLGDPYFAIKVWKCMLENYHSGLEDTGNLLVVGLGDLNRVPEAVKYAEDMI 498

Query: 478 DRG 481
            RG
Sbjct: 499 VRG 501

[Close]

BLAST of Carg18267 vs. TrEMBL
Match: tr|A0A067KAI0|A0A067KAI0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13422 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 252/427 (59.02%), Postives = 331/427 (77.52%), Query Frame = 0


Query: 54  KTPHFVSYLDFPNLPFKIKLLCEIIANASSIDLEIVLEETGVQVSREDVEDVLKLSYKFP 113
           K P+F SY+D PNLP KIKLLCE+IAN  S  +E  + + GV+VS+ DVE VLKLSY FP
Sbjct: 50  KRPNFPSYIDTPNLPSKIKLLCELIANTPSSAVESAITDAGVRVSQSDVEQVLKLSYSFP 109

Query: 114 GSSMKFFRWSGRKLNDQHSPYAWNLIVDMLGKNLHFEPMWDAMKSMKNEGLISLATFASV 173
           G ++KFFRWSG +L D HSPY+WNL+VD+LGKN  F+ MWDA+KSMK EGL+SLATFASV
Sbjct: 110 GPAVKFFRWSGFQLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKREGLVSLATFASV 169

Query: 174 FSSYIVANRVKDAIVSFEVMDLYGCPRDVVALNSLLSAICRDGNTKDADEFLQIAKGKIR 233
           F SY++A +VKDAI++FEVMD YGC RD+VALNSLLSAICRDG T DA +FL++AK  IR
Sbjct: 170 FGSYVIAGQVKDAIMTFEVMDQYGCSRDIVALNSLLSAICRDGKTDDALQFLRVAKNAIR 229

Query: 234 PDPDSYAIVLEGWESEGNIVCARQTFVEMIEQIGWDPTNTPAYNSFLCLLLKDPNGLHEA 293
           PD D+YAI+LEG E EGN++ AR+TF+E++  IGWDP+N PAY++FLC LL    GL+EA
Sbjct: 230 PDADTYAILLEGCEKEGNVLDARETFMELVNDIGWDPSNLPAYDTFLCTLLMGREGLNEA 289

Query: 294 LMFFKRLKDKMCYPGFKFFKLALDECAKNRDVKAGKYLWNEIIESINFQPDTHMYNSMIV 353
           + F + +KD+ C+PG +FF+ AL EC K  D+K   Y+W  ++E   F PDT +YN MI 
Sbjct: 290 IQFLQMMKDRSCFPGIRFFRAALQECLKLNDIKRATYVWEVMVERKGFMPDTELYNLMIA 349

Query: 354 LCCHQNDADAARRLLDEMISYGAFPNLETYNLLFRFLLKEKKLREASSIFDEMVKNEFVP 413
           L C+  + D A + LDEM+  GAFP+ +TY++LF+FL+K +KL+ AS++F+EM+KNE+VP
Sbjct: 350 LHCYTCNTDVAEKFLDEMVYNGAFPDRQTYDVLFQFLIKGRKLKAASAVFNEMIKNEYVP 409

Query: 414 SHANCKAAVRIYIENEDPNGAIKVWKCMVKIYESDLEEIGNFLIVGLQDQRRLPEAVKYA 473
           + ANC AAVR+Y+ ++DP  AIK+WKCMV+ YESDLEE GN L+  L D    PEA+KY 
Sbjct: 410 NQANCSAAVRVYMHSQDPCMAIKIWKCMVENYESDLEETGNLLVSELCDLHMDPEALKYT 469

Query: 474 NEMIDRG 481
             M+++G
Sbjct: 470 EGMVEKG 476

The following BLAST results are available for this feature:

BLAST of Carg18267 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963446.1	7.8e-276	99.79	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur...	[more]
XP_022990962.1	4.9e-270	95.23	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur...	[more]
XP_023511926.1	2.3e-264	96.06	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucur...	[more]
XP_022141574.1	6.7e-227	81.04	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momor...	[more]
XP_004140363.1	1.7e-222	78.22	PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-...	[more]

BLAST of Carg18267 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77360.1	5.2e-24	30.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62540.1	2.3e-16	24.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62470.1	3.1e-16	24.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14820.1	3.1e-16	24.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G20300.1	4.0e-16	30.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg18267 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FVX2\|PP129_ARATH	9.4e-23	30.59	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
sp\|Q3EAF8\|PP294_ARATH	4.2e-15	24.87	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
sp\|Q9LZP3\|PP293_ARATH	5.5e-15	24.87	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
sp\|Q9LEQ7\|PP382_ARATH	5.5e-15	24.87	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]
sp\|Q9LN22\|PPR54_ARATH	7.2e-15	30.87	Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop...	[more]

BLAST of Carg18267 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTM8\|A0A0A0KTM8_CUCSA	1.1e-222	78.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420290 PE=4 SV=1	[more]
tr\|A0A1S3CCN3\|A0A1S3CCN3_CUCME	9.9e-203	73.86	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc...	[more]
tr\|M5WTJ7\|M5WTJ7_PRUPE	3.2e-161	63.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005397mg PE=4 SV=1	[more]
tr\|A0A251Q218\|A0A251Q218_PRUPE	2.7e-160	63.12	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G160100 PE=4 SV=1	[more]
tr\|A0A067KAI0\|A0A067KAI0_JATCU	2.5e-153	59.02	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13422 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18267-RA	Carg18267-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 382..414 e-value: 1.3E-6 score: 26.2 coord: 347..379 e-value: 1.3E-6 score: 26.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 203..226 e-value: 0.62 score: 10.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 343..390 e-value: 1.6E-10 score: 40.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..307 score: 7.541
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 132..166 score: 7.805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 379..413 score: 11.049
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 235..270 score: 7.202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 449..483 score: 5.557
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 201..231 score: 7.673
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 344..378 score: 11.279
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 111..279 e-value: 3.1E-17 score: 64.9 coord: 288..452 e-value: 2.7E-29 score: 104.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..54
None	No IPR available	PANTHER	PTHR24015:SF698	SUBFAMILY NOT NAMED	coord: 37..480
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 37..480
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 322..487

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18267	Cla019763	Watermelon (97103) v1	carwmB0523
Carg18267	Csa5G420290	Cucumber (Chinese Long) v2	carcuB0556
Carg18267	MELO3C022847	Melon (DHL92) v3.5.1	carmeB0531
Carg18267	ClCG03G008670	Watermelon (Charleston Gray)	carwcgB0512
Carg18267	CSPI05G14970	Wild cucumber (PI 183967)	carcpiB0562
Carg18267	Cucsa.006330	Cucumber (Gy14) v1	carcgyB0606
Carg18267	CmaCh04G022960	Cucurbita maxima (Rimu)	carcmaB0738
Carg18267	CmoCh04G024000	Cucurbita moschata (Rifu)	carcmoB0716
Carg18267	Lsi09G009320	Bottle gourd (USVL1VR-Ls)	carlsiB480
Carg18267	Cp4.1LG01g19970	Cucurbita pepo (Zucchini)	carcpeB0747
Carg18267	CsGy5G014830	Cucumber (Gy14) v2	carcgybB0533
Carg18267	MELO3C022847.2	Melon (DHL92) v3.6.1	carmedB0536
Carg18267	CsaV3_5G024040	Cucumber (Chinese Long) v3	carcucB0564
Carg18267	Cla97C03G059920	Watermelon (97103) v2	carwmbB0554
Carg18267	Bhi12G001070	Wax gourd	carwgoB0637

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18267	Silver-seed gourd	carcarB500
Carg18267	Cucurbita maxima (Rimu)	carcmaB0737
Carg18267	Cucurbita moschata (Rifu)	carcmoB0714
Carg18267	Cucurbita pepo (Zucchini)	carcpeB0746