Carg18167 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAGGATTAAGAAACAAGGGAAGAAAGAGAATATAGATATTCAAAAACCTAACTCTTCTTTCTTGAATGATGGTTTGGACCTTTGGTCCTCCATCTTCGTCTTTGCTCTCCTGCTTTCTCAGTTAACAAATAAAACTAACCCTTTTTGTTGGTTTGGTTACTAATTCATTCCTGTTTCTAATGCAAAATTTCCCAACTGGGCTTCTTTTACATGTAATCTTCCTGCTTTAACTTGCTTTGTTGTTCGTGATCTCGCCCACTATGACGCTGGATTCTCCTCCTCCTCCTCCTCCGATCCCTTCTGACCGATCCTCCCCTGAGCCCCTTTCCCACATCGACAACCCCAACCCCACCACGGCTAACCATGACCTTATTCTCGAGAACGAGCCCACCACCGCGACTATATCCGAACAACCCACCACGAGGAGAAACCGACCCTCTCGGGCTTGCACCCTTCGTGCTGCAGAGCGGCTCTTGGCTGCTCAGTCAGTGGTCGAGCGCAAGCCGAAGCCTAAAAAGGAGCAGCCAACCGAAGAGTCGCCACAGCAGCAGCAATGCAGCAAGATCGTGACCCCTCTGGTTGAGGAGCCTTCGCCCTCACAGTTACCACGTTGGAGTCTTCGGTCGAAGTGGGAACTGGCGTCCGTACTTAATTTCTTGCATGTAAGTTTTGTGGGGTATGTCTTCCTGATCAAAATTTGCATATTGTTGGCGTTTGAGACTTCAATTCTTTCTTGTGCGAGGTGCAGGTCTTCAGGCCACTATTGAATATTCATAATGAATTCACGGTGGAGGAGTTTGAGACAGCCTTGATTACACCCAACGACACTTTGAGTGACATACACATTCCATTACTCAAGGTTGGAACTTGAATTTAAACTGGAAAGTTTATGCTGATTGGAAAAGGCAATGGGTTATCCACATTTTGCTCATCATTCTAACTTAGCTTACTTTCTGTTGCTCCACTTATGGTCATTACTTTTTTGTTTCAAGTTTCATTTGGAGGTTTGGTGGGAGTTCTTAGTGTTAGTTTCTGAAGCCAAGTATTTATTTGAAAGAGAAGTTTACTGGATTTGTTCCTTTCTCATCTAAGAGTTGCATCTTGTTTAGGTTTGAAGCTCGAGAAACTTCACAGTTCTATGATCAATAATTAGTTATTCAATAACAGGTTCTCCTCTGGTAAAAAAATTATGCATATTGCTTAGAGATGCTTCCCTTTCCTTCTTAGAGTTGCATAGATTTCCCTCTTTTCAAAAGATACTTGCTTAGTGTTGCTTTAAGATTCTCTCATCTTTAATTGGACTTCATGTTTTCTAAGCTTTGCAATAGAGAGTTGCGTTTTAGCTGTATGTATTTTAAACTGTTGATGATGAACATTAATATTTTGCAAATGTAAGTGTTTTTATTAGACAGGGGCTAAGGTTTCGGTATTTTCTTTTGGATGATCAACATTTCGTTTGATTAAAAACAACTTTGAACTGTAATACTGGTGATTGCTTTTATTCTTATGAATAGGGTTGGTTTGTGAAATGCTCTCTTGTGCCTGCTAAGTCTTAATATTTTGAAACTGTTGGGATGGATATGTGCTGTAGAGGACCAATCATCCTATTTTTGTTGATAGACTTCTGATGTTTTGAAGGATTAGAGCTTCTCAAATTTTTGGAGATTGAAGAATTGGAGCATCATGTGGACATATGAAACTTTTCTTTGAGTGCGTTTTGTCCGATTGTCTGTTAGATCTCACACATTGGTTGGAGAGGGGAACAAAACATTCCTCCTAAGGGTGTGAAAACCTTTCCCTAACAGACGTGTTTTAAATGGTATTTCTTATCTGCTAGTGATGAGTTTGGGCTGTTACAAATGGTAATAGAGCTAGACATCAGGTGGTGTGCCAGTGAGGATGCTGGACCCCAAGGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAGGAACCAAGCATTCATTATAAGAGTGTGGAAGCCTCTCCCTAATAGATGCGTTCTAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCGAAAGGGAACAGTATCTGCTAGTGGTGAGCTTGGGTTGTTACAAATGGTATTAGAGCCAGACACCGGGTGGTGTGCCAGTGAGGATGTTGGACCCGAAGGGGGTGGATTGTGAGATCCTATATCGGTTGAAGAGGGGAACCAAACATTCATTATAAGAGTGTGGAAGCCTCTCCCCAACAGACGCGTTTTAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAGAGGACAATGTCTGCTAGCGGTGGGCAATGTGGGTTTTTCCCCCATTAAATAATGGATGAAAAGAAGTTGCCTTGGGTGGTAAGCGATGCCAATTAATAACTTGTTCACAGCAGTTTTAATTTGTGAGGTGAATTCTACCTTTTCCCTTCTTGTTGGCCACTAGGTTATATTTCAATATTTAGCTCCCTTTCCTATAAAGTTAATTAAGCTTTATTCTCTCGTTCTAGTTTTGAGTTTTAGAAATGAACTTTAGTTGTTGAAGTTGCACAAATGGCCCATTAGCGTACATCTTTAAAACTCTTCTTTCATATCTTGTGTTCAAATCCCCCCCCCCATCAAAAGGAATGAACTTTAATTTTCATGCCTTTTCTTATGTACTCGTTTAGGCTGGTCTATATAATTCATCCTCATCGCTTAGAACAGTTGAATCTGTCGATTTATGAAAATTATGGGCTGTACATATTTTCTTTATTAAGCATCACATTACTTCATTCTGAAAATTTTACCTTTTTGTTTTACTTTTGCAACTTATTGTCTGCGGTAATTGCTGGAATATTTGATCCTTAGGTCAAGTTGTATAGTTCACCTCCATGTTAACTTTGTTACAAGGACTTCTGATGCGTTGCTAGTTCGTTTGAGAATGTGTTTCTTTTTCTCCCAACAAGAAACTCACACACGTTACTAATGTTATATAATAACCGTAATCGGCTCCCTGTAACTTATATTTTGTGTGTTTTTCAGGCGATTCCTCCTATTACAAGAATGGCCCTTACTCGGGATACATGGGTGACTGTATTGTGCAGAAAGCTGCGAGACTGGTGGCACTGGGTATCGTCCATATATTTCATATTCATCCATATATTCCTGTATCGTGGCTGTGATGGAATCCCACAGTTCTAGCTTCCAATCTGACTCATGGTCCTTGGTTTGTATATGCAGGTTGCTGAAGGGGATCTGCCTATTGTTGCTTCACATGGGTGAGTGCCTAGAGATTTCATGTCCCATATCTAAAAATGTTCTTCATTCTTATGTTCCTAATCATGAGTTTTCAGAGTTGAAATTGAAGTTTATAAAAATCTTGATCCTGGGATGCGTGTGGTTATCTTGAAAGCACTATGCGACATTCGTGTTGAGGTACTGTCTTCTCAAAAAGTACCAAATTTTCTGGTTACAATACAATTGCCTTTGTGAAGTTGACGTAGTGTTTGACAGTACCGAGCGACATTTCTTTATTCGTTTACAACTGTTTTATTGGTTTAGACTTTGTTCTCTATACTGCCAGTAGGCAACATCCTACAGGCAACAAGGTAGGTCCAGAGTGTGAGCTCTCTTGAGAACCGTGTCAATCGACTTTCTAATCCTTCACTTCATTGCCCTTTTCTCTAAGCCCTCAAATGATCAGGCTCTTTCGATTATTTATTGTTCGCTGATCCTATATTTCCTGCATCATCTCGCTGTATGTCATGTTGGGTTCATTTGTATTTAATGTGTTCGTCCTATAGTCGGTATATAGTTTTAGAACTACTGAAGTTGAACAAGAGATAAATTGTTCGTTGCAGCAAGAAGATATCCGCAGCTACATTGAAAATTCCCTAAAACATGGAGTTCAACTTTCAGCGTTTCGCAAAGAACGAATTGGTGGAGATTCACATGGAACTTATTTCTGGTATAGTTTTCTTTTAACCTCTTCATGTTGTGGCATTTTTAACGGTATAAAATATCCCGACTTCTTTAATACGTTTATTGTGTGTCGACTATGTGGCAATTGTTATTGCAGGTATGAGGATGATCCCATTATTGGTCATCGTTTGTACCGTGAGATTAGGAAAGTCGAGTTGAAAAAACCCAAGGCCAAAGGTTCACAAGTCCTTCCTTCTACAATATACCAGTGGGAAACAGTTGCAACCAATTTTGATGAATTTCAAGATGTGTCGGTGAGTTGCTATACCGTTCACCCCAGCATATGCATCTCATGGAAAACACTTCATTTCCCCTCCCCCGAACGAAAACTGCTTTCTTAA AAAGAAGGATTAAGAAACAAGGGAAGAAAGAGAATATAGATATTCAAAAACCTAACTCTTCTTTCTTGAATGATGGTTTGGACCTTTGGTCCTCCATCTTCGTCTTTGCTCTCCTGCTTTCTCAGTTAACAAATAAAACTAACCCTTTTTGTTGGTTTGGTTACTAATTCATTCCTGTTTCTAATGCAAAATTTCCCAACTGGGCTTCTTTTACATGTAATCTTCCTGCTTTAACTTGCTTTGTTGTTCGTGATCTCGCCCACTATGACGCTGGATTCTCCTCCTCCTCCTCCTCCGATCCCTTCTGACCGATCCTCCCCTGAGCCCCTTTCCCACATCGACAACCCCAACCCCACCACGGCTAACCATGACCTTATTCTCGAGAACGAGCCCACCACCGCGACTATATCCGAACAACCCACCACGAGGAGAAACCGACCCTCTCGGGCTTGCACCCTTCGTGCTGCAGAGCGGCTCTTGGCTGCTCAGTCAGTGGTCGAGCGCAAGCCGAAGCCTAAAAAGGAGCAGCCAACCGAAGAGTCGCCACAGCAGCAGCAATGCAGCAAGATCGTGACCCCTCTGGTTGAGGAGCCTTCGCCCTCACAGTTACCACGTTGGAGTCTTCGGTCGAAGTGGGAACTGGCGTCCGTACTTAATTTCTTGCATGTCTTCAGGCCACTATTGAATATTCATAATGAATTCACGGTGGAGGAGTTTGAGACAGCCTTGATTACACCCAACGACACTTTGAGTGACATACACATTCCATTACTCAAGGCGATTCCTCCTATTACAAGAATGGCCCTTACTCGGGATACATGGGTGACTGTATTGTGCAGAAAGCTGCGAGACTGGTGGCACTGGGTTGCTGAAGGGGATCTGCCTATTGTTGCTTCACATGGAGTTGAAATTGAAGTTTATAAAAATCTTGATCCTGGGATGCGTGTGGTTATCTTGAAAGCACTATGCGACATTCGTGTTGAGCAAGAAGATATCCGCAGCTACATTGAAAATTCCCTAAAACATGGAGTTCAACTTTCAGCGTTTCGCAAAGAACGAATTGGTGGAGATTCACATGGAACTTATTTCTGGTATGAGGATGATCCCATTATTGGTCATCGTTTGTACCGTGAGATTAGGAAAGTCGAGTTGAAAAAACCCAAGGCCAAAGGTTCACAAGTCCTTCCTTCTACAATATACCAGTGGGAAACAGTTGCAACCAATTTTGATGAATTTCAAGATGTGTCGGTGAGTTGCTATACCGTTCACCCCAGCATATGCATCTCATGGAAAACACTTCATTTCCCCTCCCCCGAACGAAAACTGCTTTCTTAA ATGACGCTGGATTCTCCTCCTCCTCCTCCTCCGATCCCTTCTGACCGATCCTCCCCTGAGCCCCTTTCCCACATCGACAACCCCAACCCCACCACGGCTAACCATGACCTTATTCTCGAGAACGAGCCCACCACCGCGACTATATCCGAACAACCCACCACGAGGAGAAACCGACCCTCTCGGGCTTGCACCCTTCGTGCTGCAGAGCGGCTCTTGGCTGCTCAGTCAGTGGTCGAGCGCAAGCCGAAGCCTAAAAAGGAGCAGCCAACCGAAGAGTCGCCACAGCAGCAGCAATGCAGCAAGATCGTGACCCCTCTGGTTGAGGAGCCTTCGCCCTCACAGTTACCACGTTGGAGTCTTCGGTCGAAGTGGGAACTGGCGTCCGTACTTAATTTCTTGCATGTCTTCAGGCCACTATTGAATATTCATAATGAATTCACGGTGGAGGAGTTTGAGACAGCCTTGATTACACCCAACGACACTTTGAGTGACATACACATTCCATTACTCAAGGCGATTCCTCCTATTACAAGAATGGCCCTTACTCGGGATACATGGGTGACTGTATTGTGCAGAAAGCTGCGAGACTGGTGGCACTGGGTTGCTGAAGGGGATCTGCCTATTGTTGCTTCACATGGAGTTGAAATTGAAGTTTATAAAAATCTTGATCCTGGGATGCGTGTGGTTATCTTGAAAGCACTATGCGACATTCGTGTTGAGCAAGAAGATATCCGCAGCTACATTGAAAATTCCCTAAAACATGGAGTTCAACTTTCAGCGTTTCGCAAAGAACGAATTGGTGGAGATTCACATGGAACTTATTTCTGGTATGAGGATGATCCCATTATTGGTCATCGTTTGTACCGTGAGATTAGGAAAGTCGAGTTGAAAAAACCCAAGGCCAAAGGTTCACAAGTCCTTCCTTCTACAATATACCAGTGGGAAACAGTTGCAACCAATTTTGATGAATTTCAAGATGTGTCGGTGAGTTGCTATACCGTTCACCCCAGCATATGCATCTCATGGAAAACACTTCATTTCCCCTCCCCCGAACGAAAACTGCTTTCTTAA MTLDSPPPPPPIPSDRSSPEPLSHIDNPNPTTANHDLILENEPTTATISEQPTTRRNRPSRACTLRAAERLLAAQSVVERKPKPKKEQPTEESPQQQQCSKIVTPLVEEPSPSQLPRWSLRSKWELASVLNFLHVFRPLLNIHNEFTVEEFETALITPNDTLSDIHIPLLKAIPPITRMALTRDTWVTVLCRKLRDWWHWVAEGDLPIVASHGVEIEVYKNLDPGMRVVILKALCDIRVEQEDIRSYIENSLKHGVQLSAFRKERIGGDSHGTYFWYEDDPIIGHRLYREIRKVELKKPKAKGSQVLPSTIYQWETVATNFDEFQDVSVSCYTVHPSICISWKTLHFPSPERKLLS
BLAST of Carg18167 vs. NCBI nr
Match: XP_022933378.1 (DDT domain-containing protein DDR4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 615.5 bits (1586), Expect = 1.1e-172 Identity = 328/333 (98.50%), Postives = 329/333 (98.80%), Query Frame = 0
BLAST of Carg18167 vs. NCBI nr
Match: XP_022933379.1 (DDT domain-containing protein DDR4-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 615.5 bits (1586), Expect = 1.1e-172 Identity = 328/333 (98.50%), Postives = 329/333 (98.80%), Query Frame = 0
BLAST of Carg18167 vs. NCBI nr
Match: XP_023530010.1 (DDT domain-containing protein DDR4-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 585.9 bits (1509), Expect = 9.4e-164 Identity = 313/333 (93.99%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of Carg18167 vs. NCBI nr
Match: XP_023530011.1 (DDT domain-containing protein DDR4-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 585.9 bits (1509), Expect = 9.4e-164 Identity = 313/333 (93.99%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of Carg18167 vs. NCBI nr
Match: XP_022972308.1 (DDT domain-containing protein DDR4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159 Identity = 308/333 (92.49%), Postives = 311/333 (93.39%), Query Frame = 0
BLAST of Carg18167 vs. TAIR10
Match: AT1G18950.1 (DDT domain superfamily) HSP 1 Score: 384.0 bits (985), Expect = 9.8e-107 Identity = 180/217 (82.95%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of Carg18167 vs. TAIR10
Match: AT5G25580.1 (BEST Arabidopsis thaliana protein match is: DDT domain superfamily (TAIR:AT1G18950.1)) HSP 1 Score: 199.5 bits (506), Expect = 3.4e-51 Identity = 97/209 (46.41%), Postives = 135/209 (64.59%), Query Frame = 0
BLAST of Carg18167 vs. Swiss-Prot
Match: sp|F4IDY7|DDR4_ARATH (DDT domain-containing protein DDR4 OS=Arabidopsis thaliana OX=3702 GN=DDR4 PE=1 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 1.8e-105 Identity = 180/217 (82.95%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of Carg18167 vs. TrEMBL
Match: tr|A0A1S3BVK3|A0A1S3BVK3_CUCME (DDT domain-containing protein DDR4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493960 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 1.5e-130 Identity = 260/322 (80.75%), Postives = 262/322 (81.37%), Query Frame = 0
BLAST of Carg18167 vs. TrEMBL
Match: tr|A0A1S3BV01|A0A1S3BV01_CUCME (DDT domain-containing protein DDR4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493960 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 1.5e-130 Identity = 260/322 (80.75%), Postives = 262/322 (81.37%), Query Frame = 0
BLAST of Carg18167 vs. TrEMBL
Match: tr|A0A0A0LUE3|A0A0A0LUE3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008440 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 2.9e-129 Identity = 258/322 (80.12%), Postives = 260/322 (80.75%), Query Frame = 0
BLAST of Carg18167 vs. TrEMBL
Match: tr|V4SYC4|V4SYC4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019030mg PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 3.2e-120 Identity = 219/282 (77.66%), Postives = 241/282 (85.46%), Query Frame = 0
BLAST of Carg18167 vs. TrEMBL
Match: tr|A0A1Q3BG21|A0A1Q3BG21_CEPFO (DDT domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10223 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 5.5e-120 Identity = 230/287 (80.14%), Postives = 245/287 (85.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |