Carg18124 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18124
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein DETOXIFICATION
Location	Cucurbita_argyrosperma_scaffold_095 : 517271 .. 518626 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTAAACATTTTTTTGAAATAATGAAGTCCGAAATTGAGGATGTTCTCACCATGGCTTTATCTGTTTTTCTCCTTGACATTGAAATTGCGTACACTGATAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTACAATTTCATTTTATTTGTGCATTTGTGTCACTACATTCCCACTGGAAGTCTTTTGAAACTTGACGTTTCAACAAATGAACAAGTTTTATATGGATTTGGTTCAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGGTAAGTTATGCAGTTTCGTTTTGAACAGAACTCGTCCTTGCTAGGTTGAACCTTTTCATATATGTGGCTCACAGAATGCTTCCATTGAATCTTGTACAGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGGTAAACATTTTCCTTCATAGTAGAGATCACTAAAATGAAGTATCCTTTTCTCCAAAGTGAAGACAAACTTGTTGGTTATATTAGGTGGTGGTTGGAACAGTCTCTTCATGCGTTATGCTTTATGCTCCTTCCAGTTTTGGTCTCTATAGGACATGGCTAGGCTTGACACTCTTTATGGGCTTGCGTACTGTAGCTGGTTTTGCCAGGTACAATCTCGCTCTTGAACTCAAGGAAACAACTGTATAGCCTATAGAAATAGATCCTGTACTTGTTTTCATTCTTGAAGGACCTGACAACCAAAAGTTCATCACATAGAATGAGCAAATCTTATGATGATAGGTCATCAATATGCAAGATTGAAGTTCGAAATGTGAAGCTACCAATAGTTTTTAGCTCATAACTAAGTAGTTAGATGGGAAAAGTATGCAGAAGTGCTTGCATTCTAATTCTATCCTTGGATGCATTTTATCATGATACTGAAAGGGATAGTCAATTTTAAGCTCTGGAATTCAGATAGATGATAGACCATTGATCCCTAGTTCTAATGTGATTCTTCTCTACAAACATTTATAACTTCCATGCGGTTGTTTTGTTATGCAGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

mRNA sequence

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

Coding sequence (CDS)

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

Protein sequence

MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTSLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDGLHYGVSDFPYAAWSTIAFKKWSMVVPAQ

Homology

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_022928234.1 (protein DETOXIFICATION 45, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 4.2e-65
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_023529658.1 (protein DETOXIFICATION 45, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 4.2e-65
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_023529659.1 (protein DETOXIFICATION 45, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 4.2e-65
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 353 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 412

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 413 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 472

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 473 GLHYGVSDFPYAAWSTV 489

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_022989536.1 (protein DETOXIFICATION 45, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 252.7 bits (644), Expect = 7.9e-64
Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKV 
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVA 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLA LFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLAILFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_022136015.1 (protein DETOXIFICATION 45, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 5.0e-42
Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 402 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 461

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+K+GLL GIIL A+LG+SF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 462 GLALKIGLLTGIILFAILGSSFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 521

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDFPYAA S +A
Sbjct: 522 GLHYGVSDFPYAACSMMA 539

[Close]

BLAST of Carg18124 vs. TAIR10
Match: AT4G38380.1 (MATE efflux family protein)

HSP 1 Score: 168.3 bits (425), Expect = 3.5e-42
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQG   MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 365 MTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVT 424

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL I+RKGVLFV+  QP+  LA +FD
Sbjct: 425 TFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFD 484

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAA S
Sbjct: 485 GLHYGMSDFPYAACS 499

[Close]

BLAST of Carg18124 vs. TAIR10
Match: AT1G51340.2 (MATE efflux family protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-27
Identity = 61/137 (44.53%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           +T++ S+  R+G+  MAA Q+C+QVWLA + L +  A + Q I+ASA +K+DYK A    
Sbjct: 326 VTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATA 385

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           S  +++GL+ G +L  +LGA  H  A +FTKD +VL ++  G+ FV+G QP+  LA +FD
Sbjct: 386 SRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFD 445

Query: 121 GLHYGVSDFPYAAWSTI 138
           G+++G SDF YAA S +
Sbjct: 446 GVNFGASDFGYAAASLV 462

[Close]

BLAST of Carg18124 vs. TAIR10
Match: AT2G38330.1 (MATE efflux family protein)

HSP 1 Score: 114.0 bits (284), Expect = 7.9e-26
Identity = 62/136 (45.59%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A S+  + G   MA HQI +++WLAV+ LT+ALA ++Q ++A+  S+ +YK A++V  
Sbjct: 327 TLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLF 386

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             ++VGL  G  L AVL  +F   + LFT D +VL+I   G LFV+G+QP+  LA + DG
Sbjct: 387 GVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDG 446

Query: 122 LHYGVSDFPYAAWSTI 138
           L+YGVSDF +AA+S +
Sbjct: 447 LYYGVSDFGFAAYSMV 462

[Close]

BLAST of Carg18124 vs. TAIR10
Match: AT3G08040.1 (MATE efflux family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A +M  R G  PMAA QIC+QVWL  + L + LA + Q I+A + +++DY     V S
Sbjct: 331 TLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             +++G +                   F+KDP V+ ++  G+ F++  QP+  LA + DG
Sbjct: 391 RVLQMGFVXXXXXXXXXXXXXXXXXXXFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDG 450

Query: 122 LHYGVSDFPYAAWSTI 138
           +++G SDF Y A+S +
Sbjct: 451 VNFGASDFAYTAYSMV 466

[Close]

BLAST of Carg18124 vs. Swiss-Prot
Match: sp|Q9SVE7|DTX45_ARATH (Protein DETOXIFICATION 45, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX45 PE=2 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-41
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQG   MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 365 MTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVT 424

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL I+RKGVLFV+  QP+  LA +FD
Sbjct: 425 TFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFD 484

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAA S
Sbjct: 485 GLHYGMSDFPYAACS 499

[Close]

BLAST of Carg18124 vs. Swiss-Prot
Match: sp|Q9SYD6|DTX42_ARATH (Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-26
Identity = 61/137 (44.53%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           +T++ S+  R+G+  MAA Q+C+QVWLA + L +  A + Q I+ASA +K+DYK A    
Sbjct: 326 VTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATA 385

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           S  +++GL+ G +L  +LGA  H  A +FTKD +VL ++  G+ FV+G QP+  LA +FD
Sbjct: 386 SRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFD 445

Query: 121 GLHYGVSDFPYAAWSTI 138
           G+++G SDF YAA S +
Sbjct: 446 GVNFGASDFGYAAASLV 462

[Close]

BLAST of Carg18124 vs. Swiss-Prot
Match: sp|Q84K71|DTX44_ARATH (Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 62/136 (45.59%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A S+  + G   MA HQI +++WLAV+ LT+ALA ++Q ++A+  S+ +YK A++V  
Sbjct: 327 TLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLF 386

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             ++VGL  G  L AVL  +F   + LFT D +VL+I   G LFV+G+QP+  LA + DG
Sbjct: 387 GVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDG 446

Query: 122 LHYGVSDFPYAAWSTI 138
           L+YGVSDF +AA+S +
Sbjct: 447 LYYGVSDFGFAAYSMV 462

[Close]

BLAST of Carg18124 vs. Swiss-Prot
Match: sp|Q9SFB0|DTX43_ARATH (Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A +M  R G  PMAA QIC+QVWL  + L + LA + Q I+A + +++DY     V S
Sbjct: 331 TLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             +++G +                   F+KDP V+ ++  G+ F++  QP+  LA + DG
Sbjct: 391 RVLQMGFVXXXXXXXXXXXXXXXXXXXFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDG 450

Query: 122 LHYGVSDFPYAAWSTI 138
           +++G SDF Y A+S +
Sbjct: 451 VNFGASDFAYTAYSMV 466

[Close]

BLAST of Carg18124 vs. TrEMBL
Match: tr|A0A1S3BIE1|A0A1S3BIE1_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103490219 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 399 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 458

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+KVGL  G IL A+LGASF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 459 GLALKVGLFTGTILFAILGASFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 518

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDF YAA+S +A
Sbjct: 519 GLHYGVSDFRYAAFSMMA 536

[Close]

BLAST of Carg18124 vs. TrEMBL
Match: tr|A0A0A0K1I8|A0A0A0K1I8_CUCSA (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_7G024020 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 399 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 458

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+KVGL  G IL A+LGASF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 459 GLALKVGLFTGTILFAILGASFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 518

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDF YAA+S +A
Sbjct: 519 GLHYGVSDFRYAAFSMMA 536

[Close]

BLAST of Carg18124 vs. TrEMBL
Match: tr|M4D2P2|M4D2P2_BRARP (Protein DETOXIFICATION OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.1e-41
Identity = 88/135 (65.19%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQGA  MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 361 MTVATSMAARQGAFAMAAHQICMQVWLAVSMLTDALASSGQALIASSASKRDFEGVKEVT 420

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL+I+RKGVLFV+  QP+  LA +FD
Sbjct: 421 TFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLQIVRKGVLFVAATQPITALAFIFD 480

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAAWS
Sbjct: 481 GLHYGMSDFPYAAWS 495

[Close]

BLAST of Carg18124 vs. TrEMBL
Match: tr|A0A0D3BJ77|A0A0D3BJ77_BRAOL (Protein DETOXIFICATION OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 88/135 (65.19%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQGA  MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 381 MTVATSMAARQGAFAMAAHQICMQVWLAVSMLTDALASSGQALIASSASKRDFEGVKEVT 440

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL+I+RKGVLFV+  QP+  LA +FD
Sbjct: 441 TFVLKIGVVTGIALAIVLGISFSSVAGLFSKDPEVLQIVRKGVLFVAATQPITALAFIFD 500

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAAWS
Sbjct: 501 GLHYGMSDFPYAAWS 515

[Close]

BLAST of Carg18124 vs. TrEMBL
Match: tr|A0A078FGK0|A0A078FGK0_BRANA (Protein DETOXIFICATION OS=Brassica napus OX=3708 GN=BnaC03g59980D PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40
Identity = 88/135 (65.19%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQGA  MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 362 MTVATSMAARQGAFAMAAHQICMQVWLAVSMLTDALASSGQALIASSASKRDFEGVKEVT 421

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL I+RKGVLFV+  QP+  LA +FD
Sbjct: 422 TFVLKIGVVTGIALAIVLGISFSSVAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFD 481

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAAWS
Sbjct: 482 GLHYGMSDFPYAAWS 496

The following BLAST results are available for this feature:

BLAST of Carg18124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928234.1	4.2e-65	99.27	protein DETOXIFICATION 45, chloroplastic-like [Cucurbita moschata]	[more]
XP_023529658.1	4.2e-65	99.27	protein DETOXIFICATION 45, chloroplastic-like isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_023529659.1	4.2e-65	99.27	protein DETOXIFICATION 45, chloroplastic-like isoform X2 [Cucurbita pepo subsp. ...	[more]
XP_022989536.1	7.9e-64	97.81	protein DETOXIFICATION 45, chloroplastic-like [Cucurbita maxima]	[more]
XP_022136015.1	5.0e-42	71.01	protein DETOXIFICATION 45, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of Carg18124 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38380.1	3.5e-42	63.70	MATE efflux family protein	[more]
AT1G51340.2	1.4e-27	44.53	MATE efflux family protein	[more]
AT2G38330.1	7.9e-26	45.59	MATE efflux family protein	[more]
AT3G08040.1	1.2e-18	34.56	MATE efflux family protein	[more]

BLAST of Carg18124 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVE7\|DTX45_ARATH	6.4e-41	63.70	Protein DETOXIFICATION 45, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX4...	[more]
sp\|Q9SYD6\|DTX42_ARATH	2.6e-26	44.53	Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2	[more]
sp\|Q84K71\|DTX44_ARATH	1.4e-24	45.59	Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX4...	[more]
sp\|Q9SFB0\|DTX43_ARATH	2.2e-17	34.56	Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1	[more]

BLAST of Carg18124 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIE1\|A0A1S3BIE1_CUCME	6.2e-41	70.29	Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103490219 PE=3 SV=1	[more]
tr\|A0A0A0K1I8\|A0A0A0K1I8_CUCSA	6.2e-41	70.29	Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_7G024020 PE=3 SV=1	[more]
tr\|M4D2P2\|M4D2P2_BRARP	8.1e-41	65.19	Protein DETOXIFICATION OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]
tr\|A0A0D3BJ77\|A0A0D3BJ77_BRAOL	1.1e-40	65.19	Protein DETOXIFICATION OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1	[more]
tr\|A0A078FGK0\|A0A078FGK0_BRANA	1.8e-40	65.19	Protein DETOXIFICATION OS=Brassica napus OX=3708 GN=BnaC03g59980D PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006855	drug transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015297	antiporter activity
GO:0015238	drug transmembrane transporter activity

Vocabulary: **INTERPRO**
Term	Definition
IPR002528	MATE_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18124-RA	Carg18124-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002528	Multi antimicrobial extrusion protein	PFAM	PF01554	MatE	coord: 3..129 e-value: 4.4E-15 score: 55.6
None	No IPR available	PANTHER	PTHR42893	FAMILY NOT NAMED	coord: 1..138
None	No IPR available	PANTHER	PTHR42893:SF3	PROTEIN DETOXIFICATION 45, CHLOROPLASTIC	coord: 1..138

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18124	Cla015755	Watermelon (97103) v1	carwmB1066
Carg18124	Cucsa.099580	Cucumber (Gy14) v1	carcgyB1183
Carg18124	CmaCh11G013400	Cucurbita maxima (Rimu)	carcmaB1471
Carg18124	Cp4.1LG04g04610	Cucurbita pepo (Zucchini)	carcpeB1483
Carg18124	Cla97C02G030140	Watermelon (97103) v2	carwmbB1124
Carg18124	Bhi05G001368	Wax gourd	carwgoB1253

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18124	Silver-seed gourd	carcarB631
Carg18124	Cucumber (Gy14) v2	carcgybB1049
Carg18124	Cucurbita maxima (Rimu)	carcmaB1475
Carg18124	Cucurbita moschata (Rifu)	carcmoB1428
Carg18124	Cucurbita moschata (Rifu)	carcmoB1431
Carg18124	Cucurbita pepo (Zucchini)	carcpeB1482
Carg18124	Wild cucumber (PI 183967)	carcpiB1103
Carg18124	Cucumber (Chinese Long) v2	carcuB1081
Carg18124	Cucumber (Chinese Long) v3	carcucB1114
Carg18124	Bottle gourd (USVL1VR-Ls)	carlsiB974
Carg18124	Melon (DHL92) v3.5.1	carmeB1035
Carg18124	Melon (DHL92) v3.6.1	carmedB1049
Carg18124	Watermelon (Charleston Gray)	carwcgB1037