Carg18026 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18026
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SNF1-related protein kinase regulatory subunit beta-2
Location	Cucurbita_argyrosperma_scaffold_171 : 472399 .. 476170 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTCTAAAACTCCCCTTGTCTTCTTCTTCTTCTTCTTCTTCTACTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCCCGAAATCAACGAACGAACACTCGCATAATCCAAATTAGGGGTTGGATTGGAATGCAAATTTCCAACCAATTGGCCCTCTTATTGATCCAGTAATTTCAAAGCGTTTGAATGTTGATTACGACACGATCCTCTGTCGGTTGGAATTCCGCGACTCGTTTCGTTTATTAGGTTGATGGGAAATGCCAATGGTCGAGAGGAGAGTTCTCCCGGCGGTGGTGGAGGAGCGGTAGCCGACGCCGATGGACAAGGTCCGGTGATTGACAGTTCGTTGGTTAGTGAAACGAGTAACGTCGTTTCTTCAGATTCGATGGTAAATACTCCTCCTGGTAGCCCTGGGAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGGTCACTATTTCGTTCTTCTTCATATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTGTACTGTGTTTATGTGTCGATCTCTTCTTTTTGTTTTTGATTGTTCGGTGGAAGTTGTGTTTCCCGGGAAATTTCTTTATAAAGATCGCTGTATTGCAATAGTCGTAAATGGTGAAGTTCCACTCCAAGATCCACTTCGTTGACTACTTTGACTAAGATTAACTCTCCGCTGTTTCCATAATGTTGAGTGTTTGTTTCTTGTGTTTTTTCTTTGGATCATCTGCTTAATGCTGTGTTCTTTGGAGACTAATGGCCGAAATGTCTGATCCATTACAGTTTGTATATGAACAGCTGGGATTACTCTCTTAACCCTGATCCCCTTCAAACTACTGATTAATTCATTAGAGTTGGTTGGTTGCTAGAATCAAGTCTGTCATGGAGTTGAATATTACTTCGGTTTTGATCAAAGCTTTGATAATATATTCATTGAGTTTAGTGAGTGAGTTCCAGACTTGATCTTGCTGGGCAAATATCTTGGCTAGATTATAAGTTGAACTTGTTTTTTGAGATGATCCAAATGTAAATTTGTATGATGATTAGCTTTGGTTATGGCTTTTGTAATGATGGTGGGTTATATACTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGGTCCAACCCATTACAATGAAGCTTGGCAGAACGAGTTCCATGAAACTGTAGATAATCCTCCAGAGCAAGGGATCCCGACGATTATTACGTGGAGCTACGGTGGCAGCAGCGTGGCTATTGAGGGGTCTTGGGACAACTGGGCATCCAGGTTATTTCTCATCGCTTCTGGGCTGTCGCGGTTCTTCCGAGCCTGCTTCATGACTCCGTTGCATTTTGAATAAGTAATGAAATATTATGTTACACTGCTTCTGCAGGAAGACCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTATCGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAAAAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGTAAGTGTGATTCTTGCCTCCATCTGCATTATCATTACCATCCAGTAGGCATGAACTATGAACTCGATTCATTATTTATATTGACGAATGATGCGTTTATAGTTTGTGAAATGGAAATTACCAAGTGTGCAAAAGTACTTGCTCGATTTATTGTAGGCAATACCTGAAAAGCAAGGCAAATTTCCAGTTGGACGACATTAATCCAATTTGAGGAAGAAAGGAACTCTTTCCATTTTGTGGGCTTACACACATTTGCTCACTTACGCGGTCCCCCCTCAGCTTACCCTAGCCCCGGGCCTTTTGCTCTTCTAACGTAAGCTCCAAGGCTTGATGAGGTTTATAAATGCGACCTTAGTAATGTGTAATAAATGGTTAACTAATGGATGATTATTTACACATTGAACCAGCACATCATTGGTCTTCACTCATACGTTGGATATAGATATCTTTAGATATTTTTAGTTTTAAACCTGGAAAATGACCAAAGAAAAGAATGAGGATTCTTCTCCACTCCCCAAGACCCTAAAGTTGTGTAGAAACTCAGATAGCCAAAACAATCTTACTGTCTCAGATTATGACCATACAAGTTCCAAAAGAAAAGAGAAGGAAGAAAAGGATAGAGCATAGGAAAGAAGCAACGATATGTGCTTACAAATCTGTTGGCTGGTCTGAATGATGCCAAAATCTCCTGGAACAGTTCTTTTTTAACACTTTTCTTGAACACCAACGTGATTATATATATATATATATAAACACAAGTACTTGAGAATTTTGTTTTGATCCTCGATCTAGCAACCGTAGAAGCTCTGGATACGACTCGGAAAGTATTTTCTTTATCATGTCATGCATATTTTACTCTACAGAGAACTGCCCTAGCTTCCATCTGGTTTTGTTTGGTTACTTGATTTTATGATATTTGGAAGGGAGAAAAACGATAAATCTAGACATGTCAATTAGAAAATTATACATCGAAACGGGAAGATGCATCGATGTTGGCTTAGACAGGCTCTCTTGTCCATTCTTTTGTGCAATGAAACACATGCATTCGGTTTGTAAATAGCACAAATGTAATATATTTCATGTCTTCTTGCTTGTCAGGAGTTGCTAATCGATTGTTTTATCGGTAGATTATTCGATAGATATGGGAAGAGGGACGAAAATACATGGACCGAGTATTTTCTTTTGCTAATATATTTCTTTTGTGCAATGAAACACATGCATTCGGTTTGTAAATAGCACAAATGTAATATATTTCATGTCTTCTTGCTTGTCAGGAGTTGCTAATCGATTGTTTTATCGTAGATTATTCGATAGATATGGGAAGAGGGACGAAAATACATGGACCGAGTAGTTGTCCATAAAGTGCTAGCAGCTGAGCTACAAAAGAAAAATATAACACATACACACGCTTCATATTAGTAATGGCTGGTCAAGCACGCAGATCATAGAACTAGAATGGGATAGGATAGGAGGTTCTAGGCTGTTCTTATGTTTCTCGAATGCGTTTATCATCCGAGTTCATATTCTATTGATAATCAGCATAACTCATTAACTTTTCTGGATCAAAAGCAAAATCAATTATGTTTCACATCATATTTTACCGTATGCATCTTGTTAAATGTTGAATACTCATGGACAAAATTACTTTAGAAAGAGATGCAAAGGTCCAACTGGTCAAATAATTCATATTCATTCTTCATCTTGGAGTTGGTTCTGTTTTGTAGGATAGCGCGCCTGATATTCTACAGAGCTTGGCCGAGTTCGAGGCTCCACCATCACCGGAGACAACTTACAGCCAGGTGTTCCCTAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCCGTGCCATCGCAGCTGCACCTCACGGTTCTAGGTATGGAGAATGCTGATGAAGCATCATCCTCAAAGCCTCAACATGTTGTGCTTAACCACCTCTTCATTGAGAAAGGGTGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCATTCAAAGTATGTCACCGTCGTCCTCTACAAACCGTTGAACAGGTAGTTATGATTGATTTTTCACGCTGAACTCTGTAAAGGATCACGAGCTACGGAATCTTGTTTTTATAGAACTGCTTGCCCAAAGTTTGCTTGCAACAAACACTCTTAATTCTAGTCAATATTTCTTCAATCTGTGAAGAAATCTTTGTTTTATAGAACTGCTTGGCCAAAAAGGTTTCATTAC

mRNA sequence

TCTATTCTAAAACTCCCCTTGTCTTCTTCTTCTTCTTCTTCTTCTACTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCCCGAAATCAACGAACGAACACTCGCATAATCCAAATTAGGGGTTGGATTGGAATGCAAATTTCCAACCAATTGGCCCTCTTATTGATCCAGTAATTTCAAAGCGTTTGAATGTTGATTACGACACGATCCTCTGTCGGTTGGAATTCCGCGACTCGTTTCGTTTATTAGGTTGATGGGAAATGCCAATGGTCGAGAGGAGAGTTCTCCCGGCGGTGGTGGAGGAGCGGTAGCCGACGCCGATGGACAAGGTCCGGTGATTGACAGTTCGTTGGTTAGTGAAACGAGTAACGTCGTTTCTTCAGATTCGATGGTAAATACTCCTCCTGGTAGCCCTGGGAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGAATCAAGTCTGTCATGGAGTTGAATATTACTTCGGTTTTGATCAAAGCTTTGATAATATATTCATTGAGTTTACTTTGGTTATGGCTTTTGTAATGATGGTGGGTTATATACTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGGTCCAACCCATTACAATGAAGCTTGGCAGAACGAGTTCCATGAAACTGTAGATAATCCTCCAGAGCAAGGGATCCCGACGATTATTACGTGGAGCTACGGTGGCAGCAGCGTGGCTATTGAGGGGTCTTGGGACAACTGGGCATCCAGGAAGACCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTATCGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAAAAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGCGCGCCTGATATTCTACAGAGCTTGGCCGAGTTCGAGGCTCCACCATCACCGGAGACAACTTACAGCCAGGTGTTCCCTAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCCGTGCCATCGCAGCTGCACCTCACGGTTCTAGGTATGGAGAATGCTGATGAAGCATCATCCTCAAAGCCTCAACATGTTGTGCTTAACCACCTCTTCATTGAGAAAGGGTGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCATTCAAAGTATGTCACCGTCGTCCTCTACAAACCGTTGAACAGGTAGTTATGATTGATTTTTCACGCTGAACTCTGTAAAGGATCACGAGCTACTCAATATTTCTTCAATCTGTGAAGAAATCTTTGTTTTATAGAACTGCTTGGCCAAAAAGGTTTCATTAC

Coding sequence (CDS)

ATGGGAAATGCCAATGGTCGAGAGGAGAGTTCTCCCGGCGGTGGTGGAGGAGCGGTAGCCGACGCCGATGGACAAGGTCCGGTGATTGACAGTTCGTTGGTTAGTGAAACGAGTAACGTCGTTTCTTCAGATTCGATGGTAAATACTCCTCCTGGTAGCCCTGGGAACCTCCGATCCCCGATCTTGTTCGCTCCTCAGAATCAAGTCTGTCATGGAGTTGAATATTACTTCGGTTTTGATCAAAGCTTTGATAATATATTCATTGAGTTTACTTTGGTTATGGCTTTTGTAATGATGGTGGGTTATATACTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGGTCCAACCCATTACAATGAAGCTTGGCAGAACGAGTTCCATGAAACTGTAGATAATCCTCCAGAGCAAGGGATCCCGACGATTATTACGTGGAGCTACGGTGGCAGCAGCGTGGCTATTGAGGGGTCTTGGGACAACTGGGCATCCAGGAAGACCCTGCAGAGGACTGGTAAAGATTTTTCGATACTTATCGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAAAAGAGATATATTCCAGATCTTCCTTACATAGCTGATGAGATGGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGCGCGCCTGATATTCTACAGAGCTTGGCCGAGTTCGAGGCTCCACCATCACCGGAGACAACTTACAGCCAGGTGTTCCCTAGCGAGGAAGACTTCGCCAAGGAGCCAGCAGCCGTGCCATCGCAGCTGCACCTCACGGTTCTAGGTATGGAGAATGCTGATGAAGCATCATCCTCAAAGCCTCAACATGTTGTGCTTAACCACCTCTTCATTGAGAAAGGGTGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCATTCAAAGTATGTCACCGTCGTCCTCTACAAACCGTTGAACAGGTAG

Protein sequence

MGNANGREESSPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSPILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR

Homology

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BLAST of Carg18026 vs. NCBI nr
Match: XP_023531782.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.0 bits (1377), Expect = 1.7e-148
Identity = 284/327 (86.85%), Postives = 285/327 (87.16%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60
           MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP
Sbjct: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60

Query: 61  ILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNGP 120
           ILFAP                                          QVPVAPLQGGNGP
Sbjct: 61  ILFAP------------------------------------------QVPVAPLQGGNGP 120

Query: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI 180
           THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRK+LQRTGKDFSI
Sbjct: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKSLQRTGKDFSI 180

Query: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240
           LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS
Sbjct: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240

Query: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 300
           PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS
Sbjct: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 285

Query: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 328
           QSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. NCBI nr
Match: XP_022933563.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 284/327 (86.85%), Postives = 284/327 (86.85%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60
           MGNANGREESXXXXXXXXXXDADGQG VIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP
Sbjct: 1   MGNANGREESXXXXXXXXXXDADGQGSVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60

Query: 61  ILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNGP 120
           ILFAP                                          QVPVAPLQGGNGP
Sbjct: 61  ILFAP------------------------------------------QVPVAPLQGGNGP 120

Query: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI 180
           THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI
Sbjct: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI 180

Query: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240
           LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS
Sbjct: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240

Query: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 300
           PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS
Sbjct: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 285

Query: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 328
           QSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. NCBI nr
Match: XP_022967978.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 278/327 (85.02%), Postives = 279/327 (85.32%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60
           MGNANGRE  XXXXXXXXXXDA GQGPVI SSLVSETSNVVSSDSMVNTPPGSPGNLRSP
Sbjct: 1   MGNANGREXXXXXXXXXXXXDAGGQGPVIGSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60

Query: 61  ILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNGP 120
           ILFAP                                          QVPVAPLQGGNGP
Sbjct: 61  ILFAP------------------------------------------QVPVAPLQGGNGP 120

Query: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI 180
           THYNEAWQNEFHETVDNPPEQGIPTIITWSYGG SVAIEGSWDNWASRK LQRTGKDFSI
Sbjct: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGSWDNWASRKILQRTGKDFSI 180

Query: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240
           LIVLPSGVYHYKFIVDGQKRYIPDLP+IADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS
Sbjct: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240

Query: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 300
           PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS
Sbjct: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 285

Query: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 328
           QSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. NCBI nr
Match: XP_022147666.1 (SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia])

HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132
Identity = 244/328 (74.39%), Postives = 260/328 (79.27%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQ-GPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60
           MGNANGREE+          DADG  GPV D+ + +ETSNVVSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHGGPVTDNPVPAETSNVVSSDSMGNTPPGSPGNFRS 60

Query: 61  PILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNG 120
           PILF+P                                          QVPVAPL+GGNG
Sbjct: 61  PILFSP------------------------------------------QVPVAPLRGGNG 120

Query: 121 PTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFS 180
           PT YNEAWQNEFH   DNPPEQGIPTIITWSYGG +VA+EGSWDNWASRKTLQR+GKDFS
Sbjct: 121 PTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEGSWDNWASRKTLQRSGKDFS 180

Query: 181 ILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPP 240
           I++VLPSGVYHYKFIVDGQ+RYIPDLP+IADEMGNVFNLLNVSDS PDILQS+AEFE+PP
Sbjct: 181 IVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLNVSDSVPDILQSVAEFESPP 240

Query: 241 SPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 300
           SPETTYSQ FP EEDFAK+PAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA
Sbjct: 241 SPETTYSQAFPREEDFAKDPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 286

Query: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           SQSVVALGLTHRFHSKYVTVVLYKPL R
Sbjct: 301 SQSVVALGLTHRFHSKYVTVVLYKPLKR 286

[Close]

BLAST of Carg18026 vs. NCBI nr
Match: XP_008451036.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 244/328 (74.39%), Postives = 257/328 (78.35%), Query Frame = 0


Query: 1   MGNANGREES-XXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60
           MGNANGRE+S           D D Q P I SS+ SETSNVVSSDSM NTPP SPG  RS
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAI-SSVNSETSNVVSSDSMGNTPPHSPGKFRS 60

Query: 61  PILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNG 120
           PILFAP                                          Q+PVAPLQGGNG
Sbjct: 61  PILFAP------------------------------------------QIPVAPLQGGNG 120

Query: 121 PTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFS 180
           PTHYN AWQNEF   +D+PPEQGIPTIITWSYGGS+VA+EGSWDNWASRKTLQRTGKDFS
Sbjct: 121 PTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGSWDNWASRKTLQRTGKDFS 180

Query: 181 ILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPP 240
           +L+VLPSGVYHYKFIVDGQ+RYIPDLP+IADEMGNVFNLLNVSDS PDILQS+AEFE P 
Sbjct: 181 LLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSDSVPDILQSVAEFEPPQ 240

Query: 241 SPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 300
           SPETTYSQ FP+EEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA
Sbjct: 241 SPETTYSQTFPTEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 285

Query: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           SQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. TAIR10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 154/274 (56.20%), Postives = 190/274 (69.34%), Query Frame = 0


Query: 54  PGNLRSPILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAP 113
           P    SP LFAPQ  +   V  Y        ++F      +    +    +    VPVAP
Sbjct: 54  PARSPSPFLFAPQPTLLFHVTSY-NICSPMRHLF----HCLGLTCVPNGCISCRMVPVAP 113

Query: 114 LQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQR 173
           LQ  N P   N  W N+     DNPPEQGIPTIITW+ GG+ VA+EGSWDNW SRK LQ+
Sbjct: 114 LQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQK 173

Query: 174 TGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLA 233
           +GKD SIL VLPSG+YHYK IVDG+ +YIPDLP++ADE+GNV N+L+V +  P+  +S+ 
Sbjct: 174 SGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIV 233

Query: 234 EFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLF 293
           EFEAPPSP+ +Y Q  P+ ED+AKEP AVP QLHLT+LG    + A ++KPQHVVLNH+F
Sbjct: 234 EFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIATKPQHVVLNHVF 293

Query: 294 IEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           IE+GW  QS+VALGLTHRF SKY+TVVLYKPL R
Sbjct: 294 IEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 320

[Close]

BLAST of Carg18026 vs. TAIR10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-63
Identity = 131/302 (43.38%), Postives = 177/302 (58.61%), Query Frame = 0


Query: 32  SLVSETSNVVSSDSMVNTPPGSPGNLRSPILFAPQNQVCHGVEYYFGFDQSFDNIFIEFT 91
           S  S+ ++V   + M  +PP SP   +SP++FAP                          
Sbjct: 4   SAASDGNHVAPPELMGQSPPHSPRATQSPLMFAP-------------------------- 63

Query: 92  LVMAFVMMVGYILQDLQVPVAPLQGGNGPTHYNEAWQ---NEFHETVDNPPEQGIPTIIT 151
                           QVPV PLQ  +     N +W    +  +E   N  EQGIPT+IT
Sbjct: 64  ----------------QVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASN--EQGIPTMIT 123

Query: 152 WSYGGSSVAIEGSWDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYI 211
           W +GG  +A+EGSWDNW +R  LQR+GKDF+I+ VLPSGVY Y+FIVDGQ R+ P+LP  
Sbjct: 124 WCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLA 183

Query: 212 ADEMGNVFNLLNVSDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHL 271
            D+ GN FN+L++ D  P+ +QS++ FE P SPE +YS +    ED++KEP  VP  L +
Sbjct: 184 RDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQM 243

Query: 272 TVLGMENADEASSS---KPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 328
           T+L +  A+    S   +PQHV+LNHL+++KG +  SVVALG THRF +KYVTVVLYK L
Sbjct: 244 TLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSL 261

[Close]

BLAST of Carg18026 vs. TAIR10
Match: AT2G28060.1 (5'-AMP-activated protein kinase beta-2 subunit protein)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 235 FEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFI 294
           FE P SP ++Y+ V+ S ED  ++P AVP  L  ++LG + + E + + PQ+VVLNHL+I
Sbjct: 17  FEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYA-PQNVVLNHLYI 76

Query: 295 EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           E   A +SVVALG +HRF +K+VTVV+YKP+ R
Sbjct: 77  ENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108

[Close]

BLAST of Carg18026 vs. TAIR10
Match: AT3G01510.1 (like SEX4 1)

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05
Identity = 30/97 (30.93%), Postives = 45/97 (46.39%), Query Frame = 0


Query: 135 VDNPPEQGIPT---IITWS-YGGSSVAIEGSW-DNWASR-KTLQRTGKDFSILIVLPSGV 194
           VD+    G PT      W+ + G  V + G +  NW    K   + G  F   + L  G 
Sbjct: 444 VDDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGK 503

Query: 195 YHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSA 226
           Y+YK+I++G  R+    P   D+ GN  N++ V D A
Sbjct: 504 YYYKYIINGDWRHSATSPTERDDRGNTNNIIVVGDVA 540

[Close]

BLAST of Carg18026 vs. Swiss-Prot
Match: sp|Q84VQ1|KINB1_ARATH (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.3e-82
Identity = 144/220 (65.45%), Postives = 174/220 (79.09%), Query Frame = 0


Query: 108 QVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWAS 167
           QVPVAPLQ  N P   N  W N+     DNPPEQGIPTIITW+ GG+ VA+EGSWDNW S
Sbjct: 66  QVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRS 125

Query: 168 RKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPD 227
           RK LQ++GKD SIL VLPSG+YHYK IVDG+ +YIPDLP++ADE+GNV N+L+V +  P+
Sbjct: 126 RKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPE 185

Query: 228 ILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHV 287
             +S+ EFEAPPSP+ +Y Q  P+ ED+AKEP AVP QLHLT+LG    + A ++KPQHV
Sbjct: 186 NPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIATKPQHV 245

Query: 288 VLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           VLNH+FIE+GW  QS+VALGLTHRF SKY+TVVLYKPL R
Sbjct: 246 VLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Carg18026 vs. Swiss-Prot
Match: sp|Q9SCY5|KINB2_ARATH (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 7.7e-63
Identity = 140/334 (41.92%), Postives = 190/334 (56.89%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDS-SLVSETSNVVSSDSMVNTPPGSPGNLRS 60
           MGN N REE+          D D +    ++ S  S+ ++V   + M  +PP SP   +S
Sbjct: 1   MGNVNAREEA-NSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRATQS 60

Query: 61  PILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNG 120
           P++FAP                                          QVPV PLQ  + 
Sbjct: 61  PLMFAP------------------------------------------QVPVLPLQRPDE 120

Query: 121 PTHYNEAWQ---NEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGK 180
               N +W    +  +E   N  EQGIPT+ITW +GG  +A+EGSWDNW +R  LQR+GK
Sbjct: 121 IHIPNPSWMQSPSSLYEEASN--EQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGK 180

Query: 181 DFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFE 240
           DF+I+ VLPSGVY Y+FIVDGQ R+ P+LP   D+ GN FN+L++ D  P+ +QS++ FE
Sbjct: 181 DFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFE 240

Query: 241 APPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSS---KPQHVVLNHLF 300
            P SPE +YS +    ED++KEP  VP  L +T+L +  A+    S   +PQHV+LNHL+
Sbjct: 241 PPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLY 289

Query: 301 IEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           ++KG +  SVVALG THRF +KYVTVVLYK L R
Sbjct: 301 MQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Carg18026 vs. Swiss-Prot
Match: sp|Q9QZH4|AAKB2_RAT (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 0


Query: 127 WQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSILIVLPS 186
           WQ +  ++V  P +Q  PT+I WS GG  V I GS++NW+++  L ++  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 187 GVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDI-----LQSLAEFE----- 246
           G + YKF VDGQ  + P  P +  ++G + NL++V  S  ++     L S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 247 ---APPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKPQHVVLN 306
              +PP P      VF SEE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 307 HLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 326
           HL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 241 HLYALS--TKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of Carg18026 vs. Swiss-Prot
Match: sp|Q6PAM0|AAKB2_MOUSE (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-29
Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 0


Query: 127 WQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSILIVLPS 186
           WQ +  ++V  P +Q  PT+I WS GG  V I GS++NW+++  L ++  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 187 GVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDI-----LQSLAEFE----- 246
           G + YKF VDGQ  + P  P +  ++G + NL++V  S  ++     L S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 247 ---APPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKPQHVVLN 306
              +PP P      VF SEE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 307 HLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 326
           HL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 241 HLYALS--IKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of Carg18026 vs. Swiss-Prot
Match: sp|O43741|AAKB2_HUMAN (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 77/216 (35.65%), Postives = 115/216 (53.24%), Query Frame = 0


Query: 126 AWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSILIVLP 185
           +WQ +  ++V  P +Q  PT+I WS GG  V I GS++NW+++  L ++  DF  ++ LP
Sbjct: 61  SWQQDLEDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLP 120

Query: 186 SGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDI-----LQSLAEFE---- 245
            G + YKF VDGQ  + P  P +  ++G + NL++V  S  ++     L S+   E    
Sbjct: 121 EGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCR 180

Query: 246 ----APPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKPQHVVL 305
               +PP P       F SEE F K P  +P  L   +L  +   + D A   +P HV+L
Sbjct: 181 DLSSSPPGPYGQEMYAFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVML 240

Query: 306 NHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 326
           NHL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 241 NHLYALS--IKDSVMVLSATHRYKKKYVTTLLYKPI 272

[Close]

BLAST of Carg18026 vs. TrEMBL
Match: tr|A0A1S3BQK7|A0A1S3BQK7_CUCME (SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN=LOC103492444 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 7.0e-130
Identity = 244/328 (74.39%), Postives = 257/328 (78.35%), Query Frame = 0


Query: 1   MGNANGREES-XXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60
           MGNANGRE+S           D D Q P I SS+ SETSNVVSSDSM NTPP SPG  RS
Sbjct: 1   MGNANGREQSTPGAPAAGGRADVDAQSPAI-SSVNSETSNVVSSDSMGNTPPHSPGKFRS 60

Query: 61  PILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNG 120
           PILFAP                                          Q+PVAPLQGGNG
Sbjct: 61  PILFAP------------------------------------------QIPVAPLQGGNG 120

Query: 121 PTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFS 180
           PTHYN AWQNEF   +D+PPEQGIPTIITWSYGGS+VA+EGSWDNWASRKTLQRTGKDFS
Sbjct: 121 PTHYNGAWQNEFDGAIDSPPEQGIPTIITWSYGGSNVAVEGSWDNWASRKTLQRTGKDFS 180

Query: 181 ILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPP 240
           +L+VLPSGVYHYKFIVDGQ+RYIPDLP+IADEMGNVFNLLNVSDS PDILQS+AEFE P 
Sbjct: 181 LLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSDSVPDILQSVAEFEPPQ 240

Query: 241 SPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 300
           SPETTYSQ FP+EEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA
Sbjct: 241 SPETTYSQTFPTEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 285

Query: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           SQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. TrEMBL
Match: tr|A0A0A0LWX6|A0A0A0LWX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600250 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 6.6e-128
Identity = 240/328 (73.17%), Postives = 255/328 (77.74%), Query Frame = 0


Query: 1   MGNANGREES-XXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60
           MGNANGRE+S           D D Q P I S   SETSNVVSSDSM NTPP SPG  RS
Sbjct: 1   MGNANGREQSTPGAPPAGGRPDVDEQSPAITSE-TSETSNVVSSDSMGNTPPQSPGKFRS 60

Query: 61  PILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNG 120
           PILFAP                                          Q+PVAPLQGGNG
Sbjct: 61  PILFAP------------------------------------------QIPVAPLQGGNG 120

Query: 121 PTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFS 180
           PTHY+ AWQNEF   VD+PPEQG+PTIITWS+GG++VA+EGSWDNWASRKTLQRTGKDFS
Sbjct: 121 PTHYSGAWQNEFEGAVDSPPEQGVPTIITWSFGGNNVAVEGSWDNWASRKTLQRTGKDFS 180

Query: 181 ILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPP 240
           +L+VLPSGVYHYKFIVDGQ+RYIPDLP+IADEMGNVFNLLNVSDS PDILQS+AEFE P 
Sbjct: 181 LLMVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFNLLNVSDSVPDILQSVAEFEPPQ 240

Query: 241 SPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 300
           SPETTYSQ FP+EEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA
Sbjct: 241 SPETTYSQTFPTEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWA 285

Query: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           SQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 301 SQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Carg18026 vs. TrEMBL
Match: tr|A5ALC6|A5ALC6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033732 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.5e-100
Identity = 201/341 (58.94%), Postives = 238/341 (69.79%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSET--SNVVSSDSMVNTPPGSPGNLR 60
           MGNANGREE            ++G   V D    + T  + V SSDSM NTPP SPG  R
Sbjct: 1   MGNANGREE-VANIRDDPTARSNGDSGVRDIYAPNSTHPARVASSDSMGNTPPQSPGRSR 60

Query: 61  SPILFAPQ-NQVCHGVEYYFG-------------FDQSFDNIFIEFTLVMAFVMMVGYIL 120
           SP++FAPQ   +C+ +                  F  S    F  +  +    M +  + 
Sbjct: 61  SPLMFAPQIGMICNDITQLVNAVTPCVPVLKDMLFTYSIHVKFYRYCQLETCSMTLLTL- 120

Query: 121 QDLQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDN 180
               VP+APLQ  +GP   N+ WQNE    V++PPEQGIP +I W+YGG+ VA+EGSWDN
Sbjct: 121 ----VPIAPLQRRDGPXSLNQMWQNEPQGGVEHPPEQGIPIMIAWNYGGNDVAVEGSWDN 180

Query: 181 WASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDS 240
           W SRKTLQR+GKD SIL+VLPSGVYHYKFIVDG+ RYIPDLP+IADEMG V NLL+V+D 
Sbjct: 181 WTSRKTLQRSGKDHSILLVLPSGVYHYKFIVDGEWRYIPDLPFIADEMGRVCNLLDVNDY 240

Query: 241 APDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKP 300
            P+ L+S+AEFEAPPSP ++YSQ FP+EEDFAKEP  VP QLHLTVLGM N++E S SKP
Sbjct: 241 VPENLESVAEFEAPPSPNSSYSQAFPAEEDFAKEPVLVPPQLHLTVLGMPNSEEPSCSKP 300

Query: 301 QHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 326
           QHVVLNHLFIEKGWASQSVVALGLT+RF SKYVTVVLYKPL
Sbjct: 301 QHVVLNHLFIEKGWASQSVVALGLTNRFQSKYVTVVLYKPL 335

[Close]

BLAST of Carg18026 vs. TrEMBL
Match: tr|D7T1F1|D7T1F1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0009g01930 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.8e-100
Identity = 197/329 (59.88%), Postives = 227/329 (69.00%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSET--SNVVSSDSMVNTPPGSPGNLR 60
           MGNANGREE            ++G   V D    + T  + V SSDSM NTPP SPG  R
Sbjct: 1   MGNANGREE-VANIRDDPTARSNGDSGVRDIYAPNSTHPARVASSDSMGNTPPQSPGRSR 60

Query: 61  SPILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGN 120
           SP++FAP                                          QVP+APLQ  +
Sbjct: 61  SPLMFAP------------------------------------------QVPIAPLQRRD 120

Query: 121 GPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDF 180
           GP   N+ WQNE    V++PPEQGIP +I W+YGG+ VA+EGSWDNW SRKTLQR+GKD 
Sbjct: 121 GPASLNQMWQNEPQGGVEHPPEQGIPIMIAWNYGGNDVAVEGSWDNWTSRKTLQRSGKDH 180

Query: 181 SILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAP 240
           SIL+VLPSGVYHYKFIVDG+ RYIPDLP+IADEMG V NLL+V+D  P+ L+S+AEFEAP
Sbjct: 181 SILLVLPSGVYHYKFIVDGEWRYIPDLPFIADEMGRVCNLLDVNDYVPENLESVAEFEAP 240

Query: 241 PSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGW 300
           PSP ++YSQ FP+EEDFAKEP  VP QLHLTVLGM N++E S SKPQHVVLNHLFIEKGW
Sbjct: 241 PSPNSSYSQAFPAEEDFAKEPVLVPPQLHLTVLGMPNSEEPSCSKPQHVVLNHLFIEKGW 286

Query: 301 ASQSVVALGLTHRFHSKYVTVVLYKPLNR 328
           ASQSVVALGLT+RF SKYVTVVLYKPL R
Sbjct: 301 ASQSVVALGLTNRFQSKYVTVVLYKPLKR 286

[Close]

BLAST of Carg18026 vs. TrEMBL
Match: tr|Q7XYX8|Q7XYX8_MEDTR (AKIN beta1 OS=Medicago truncatula OX=3880 GN=11424555 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.4e-98
Identity = 192/327 (58.72%), Postives = 223/327 (68.20%), Query Frame = 0


Query: 1   MGNANGREESXXXXXXXXXXDADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRSP 60
           MGNANGRE+           D  G+ P     +        SSDSM N+PP SP   RSP
Sbjct: 1   MGNANGREDG----AIPDAGDPSGREPHAPPPI-----RAFSSDSMANSPPQSPRRSRSP 60

Query: 61  ILFAPQNQVCHGVEYYFGFDQSFDNIFIEFTLVMAFVMMVGYILQDLQVPVAPLQGGNGP 120
           ILF P                                          QVP+APLQ GNGP
Sbjct: 61  ILFGP------------------------------------------QVPLAPLQRGNGP 120

Query: 121 THYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGSWDNWASRKTLQRTGKDFSI 180
              N+ WQNE H  V+  PEQGIP +ITW+YGG+SVA+EGSWDNWASRK LQR GKD SI
Sbjct: 121 PFLNQMWQNEPHGIVNQAPEQGIPVMITWNYGGNSVAVEGSWDNWASRKVLQRGGKDHSI 180

Query: 181 LIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNVSDSAPDILQSLAEFEAPPS 240
           LIVLPSG++HY+FIVDG++RYIPDLPY+ADEMGNV NLL+V+D  P+  +S++EFEAPPS
Sbjct: 181 LIVLPSGIFHYRFIVDGEQRYIPDLPYVADEMGNVCNLLDVNDYVPENPESVSEFEAPPS 240

Query: 241 PETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFIEKGWAS 300
           PE++Y Q +P+EEDFAKEP AVPSQLHLTVLGMENAD   SSKPQHVVLNH+FIEK  AS
Sbjct: 241 PESSYGQAYPAEEDFAKEPMAVPSQLHLTVLGMENADSGPSSKPQHVVLNHVFIEKNMAS 276

Query: 301 QSVVALGLTHRFHSKYVTVVLYKPLNR 328
           +SVVA+G+THRF SKYVTVVLYKPL R
Sbjct: 301 KSVVAMGVTHRFQSKYVTVVLYKPLKR 276

The following BLAST results are available for this feature:

BLAST of Carg18026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531782.1	1.7e-148	86.85	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo...	[more]
XP_022933563.1	5.1e-148	86.85	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita mosc...	[more]
XP_022967978.1	2.6e-144	85.02	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxi...	[more]
XP_022147666.1	6.7e-132	74.39	SNF1-related protein kinase regulatory subunit beta-1 [Momordica charantia]	[more]
XP_008451036.1	1.1e-129	74.39	PREDICTED: SNF1-related protein kinase regulatory subunit beta-1 [Cucumis melo]	[more]

BLAST of Carg18026 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21170.2	2.4e-83	56.20	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.6e-63	43.38	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT2G28060.1	1.2e-18	50.54	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT3G01510.1	2.0e-05	30.93	like SEX4 1	[more]

BLAST of Carg18026 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84VQ1\|KINB1_ARATH	4.3e-82	65.45	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SCY5\|KINB2_ARATH	7.7e-63	41.92	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9QZH4\|AAKB2_RAT	1.1e-29	36.28	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
sp\|Q6PAM0\|AAKB2_MOUSE	1.5e-29	36.28	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
sp\|O43741\|AAKB2_HUMAN	1.9e-29	35.65	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]

BLAST of Carg18026 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQK7\|A0A1S3BQK7_CUCME	7.0e-130	74.39	SNF1-related protein kinase regulatory subunit beta-1 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LWX6\|A0A0A0LWX6_CUCSA	6.6e-128	73.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600250 PE=4 SV=1	[more]
tr\|A5ALC6\|A5ALC6_VITVI	4.5e-100	58.94	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033732 PE=4 SV=1	[more]
tr\|D7T1F1\|D7T1F1_VITVI	5.8e-100	59.88	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0009g01930 PE=4 SV=...	[more]
tr\|Q7XYX8\|Q7XYX8_MEDTR	1.4e-98	58.72	AKIN beta1 OS=Medicago truncatula OX=3880 GN=11424555 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR037256	ASC_dom_sf
IPR014756	Ig_E-set
IPR037170	KINB1
IPR013783	Ig-like_fold
IPR032640	AMPK1_CBM
IPR006828	ASC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18026-RA	Carg18026-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 238..325 e-value: 8.5E-23 score: 91.7
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 256..324 e-value: 2.1E-18 score: 66.2
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 143..224 e-value: 1.1E-29 score: 102.4
IPR013783	Immunoglobulin-like fold	GENE3D	G3DSA:2.60.40.10		coord: 135..228 e-value: 4.5E-21 score: 76.6
None	No IPR available	GENE3D	G3DSA:3.30.160.760		coord: 242..325 e-value: 5.2E-23 score: 82.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR10343	5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT	coord: 108..326
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 144..221 e-value: 3.08069E-24 score: 93.4324
IPR037170	SNF1-related protein kinase regulatory subunit beta-1	PANTHER	PTHR10343:SF55	SUBFAMILY NOT NAMED	coord: 108..326
IPR014756	Immunoglobulin E-set	SUPERFAMILY	SSF81296	E set domains	coord: 141..222
IPR037256	ASC domain superfamily	SUPERFAMILY	SSF160219	AMPKBI-like	coord: 226..325

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18026	Cla011092	Watermelon (97103) v1	carwmB0163
Carg18026	Csa1G600250	Cucumber (Chinese Long) v2	carcuB0192
Carg18026	MELO3C015601	Melon (DHL92) v3.5.1	carmeB0178
Carg18026	ClCG03G014360	Watermelon (Charleston Gray)	carwcgB0165
Carg18026	CSPI01G29440	Wild cucumber (PI 183967)	carcpiB0199
Carg18026	Cucsa.142490	Cucumber (Gy14) v1	carcgyB0212
Carg18026	CmaCh11G007920	Cucurbita maxima (Rimu)	carcmaB0231
Carg18026	CmaCh10G009960	Cucurbita maxima (Rimu)	carcmaB0230
Carg18026	CmoCh11G007990	Cucurbita moschata (Rifu)	carcmoB0241
Carg18026	Lsi06G004140	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg18026	Cp4.1LG18g01070	Cucurbita pepo (Zucchini)	carcpeB0247
Carg18026	Cp4.1LG04g11570	Cucurbita pepo (Zucchini)	carcpeB0248
Carg18026	CsGy1G028720	Cucumber (Gy14) v2	carcgybB0186
Carg18026	MELO3C015601.2	Melon (DHL92) v3.6.1	carmedB0182
Carg18026	CsaV3_1G041860	Cucumber (Chinese Long) v3	carcucB0199
Carg18026	Cla97C03G064560	Watermelon (97103) v2	carwmbB0178
Carg18026	Bhi02G001435	Wax gourd	carwgoB0221

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18026	Carg06134	Silver-seed gourd	carcarB017

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18026	Silver-seed gourd	carcarB209
Carg18026	Cucurbita moschata (Rifu)	carcmoB0240