Carg17997 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17997
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Callose synthase
Location	Cucurbita_argyrosperma_scaffold_171 : 240108 .. 245783 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCACGAAATCCGTTGTGAGAATGATGTTCTTACACAATTGTTGGCTCTCGTTGTTTCGGAAGAAGATGTACCTTCAAAGTTTATGGATGATCAGGTCGGTGAAGATTTTCCAATAGAGTACATCCTCTTGAATCCTAAAAAAGTTTCATCTCTTACAGAGATTTGCAGTCTTCAGATGTGTGAAATTTCATGTCATTCAGCTCATATAAAAGTTCAGTTGTTCTTTCTGTTTAATCCTCAGTGAAGATTCTTTTATGACTTTTTAGAGGTTATGGGAAGCTTCAAAGCATTGGGCTTTTAAGTTATTTTGGTCCAATTTTATTTTCAGAATAAGCAGTTTTGCTTGACTAACAATTGATTATGGTTGAAATTGAATTGTGTCCTTGGTTTTCTTTTTAAAAATGATTCAGGGTGTACCGGAGAGTATTGCTGGAGGTTTTATTTTCTTTTTGATGGTTTCTTAAGAGATTCTCATATAGGATTCTTACTTGGCATTTCTAGAGGGTTTTGAAGGTTTCTAAGGGCTTGCATTAGTCTAATAATTCTATCAATGCAAGAGGTGTTCCTTACCAAATATCTTTCCTTGGCTTCATTTTTTTGAATCTGCTTTCTCAGATTTTGTTGCGTCTTTTTTGTACTTTTCTTCAGAAGAAGTTTCTGCATTTTTTAGCCGGAGTAGGGGTTGTCTATTGCAGATTTGTTTTGCTGTGCTAGTTGTTTTTCCTTGTTTTATCCTCTTGTAGTTTTATTTCTTCATGTCTTGTCTTCTTTCATTCCCGTTGGGAACTTATATCCTTAAAGTTTTTCCTTCCTTCTCACATGTCAATGAAACATTGTTTCTCAAAAAAAAAAAAAAAAAAAAAACTCAGGAAGCTGAAAACAATAACAATGGGCGCGCACCACATTCTTCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTTAGTGGCAAAATTTTGTATGTTTGTTTGTCATGAACAATTCATACTGATGAAATTTTGGAATGCTACTCATTTTTTTTATCAGGTCGCTTCGATGCTTTGAACTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTCCAAAAGCCAACACCAAAGTCAAAGGTTGTATTTATGCTTTGTTTAATTTTGTCAAAAGATTATCTTTCTTTTTCTTTTCTTTTTCTTTTTTTAAAAAACTCATTTGTACTGAGTTATTTATATACTATTTATTGTACTAACCGGTTTGAGTGAAGACAATATTTTCTGTTCTGTAATCTTCCATACATGAAATTATTGCTCAAACATTTGGTAGTGAGAAGTCTGCTTTAGCAGGTGGTTTTCAGGGTTTTGAATCTGTTACATGCTTGAACACGAAGAATCCGTGGATTGCAATGTGCAATTTCCGGTGGTTTCTGTGTGCACGTACAGTTTAGTACCATAACAACCTTAGAAAAACATCAATCCATTGGTGGTTCGTTCGAGTGGGCTACTTTTGGGCTTGCTTACCCTCGCCCTTTGCCCTAATTTGGATTTTTTTGTGGCTTTTAGGCCTGGTCTATAGAGATGAAACTGTAGAAGATTATGATTATTGGTATTGTTTGGAAGTACCGAATAATTAGTTAAATTAAACTAAATTCACCTCCTATTTGCAGTAATAAAAATTTACACTTCCAAATTTAGCTAAATTTTGGAGTTTAGTCCACTCAATTTTCATGAGGGAAATTTTAGTATAAACTATTTCATAGGGAGATATTCCTTTCTCTGTGGAGGAATATTTCATTGGTTATTTGGCCAGAATGCATTTCTGTAAGCCCCAGATGACAAAGGTGAGTGGAAAAAATGCGGAGTGCACAGGCATGTCTGCCTTCTATGCATTCCTATTTGGCCAGAATGCATTCCTGTAAGCCCCATCAGAAGTCTTACCTATTTGGCCAGAATGCATTCCTGTAAGCCCCATCAGAAGTCTTACTTCCCAAAGCATGTTTCACTTTTGCCTTTCCATTTCCCATCTAAACATGCAACCCCGTTCCTCTTGACGCCAACCTTTATGCAGCTTTTGCATGCACCTCCCAACATTGTACCTGAACCTGCCTTGTTTTTTAATAATCGTACTAATCCAGTCCTACCCTTTTGTGTTAGCCTTCTATCCCAGCCAAATCCTCTCTTCCCCATCGTTTACTGATTTGGACTAACCCCTCCTCCACCGAAAAGACCATTATCATCAATTACTTTTGATTACACAGATTAAGCACTCCACTTCTCATAGTCCTGTTTTATGCGACCATGAAGATTTCCTCGCTAGACCTTGCTTCCTCTCAATTGATACCTCTACCTGTCTTTTTATGTCACAGACGTTTTTGGTTGTTCCCCCATTCAGTTTTGGCCCTATTCTTTGAACTTCCTCCTCCTCACTACGCATGTGCACCATGTCACAACCTTACTGGAGAGTAGGTTGTGACCCTCACGCCATGACAAGCAAAGGGGCGTCCCTCAAGAGATGCCCATCCGGCCATATGCGGGCCAACATAGAAGAATGTCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCACCACCCCAAGTGGGCATTGAAGACATGGTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGCCGGGTAGGGCCTCGGGCCTTAACCTCAAAAGTCGAGGTTTCGGAAGGAATTTGGGCATGCGGTTCGGGAGTTAAGTCCGTCCATATGAAATATGAATGCTCGCCAAGTTTGGTGTCAATCGAACATTGGACGGACAATGCACGACACCGTATGACACCTCACGAAAATCATGTCTACTCCTGGTAGAATGAAAATAGCTCAAAATGTACTATAGGGGTACCATGGTGTTAGCTCTCCACCACCCCTGGGCCCTGTGGTCTAAGTGAGCTACCCTGTGGCACATACGTGTGTCACAGTGTGGGCGAGCATGCCGAGACGAGTGTCTCGGGGCGACTTCCTTTGAAATGGGTTTTTGAAGGACAGTACCGGACGGCACGGGTGTGCGGTATTGCGCCCCTAGCCCGCGTGTTGAGGTTGCTACATACATCCCGCTATCCGGTACGGTATCCGTAAATGACTCGCATGGGCACGGGAGGGCCTATGCCTCGAATAAGAAGATGATGGCGTCAAGACATGTGGACCCTGTCGATGGGGGATCGAGATGACAAGATGAGATGCGACGTTGTATTGAGAGACCTTGGCCCGAGCAGAGGCAAGGTCGAGCCGAATGAGTTGGCCTAGCGTAGAGGCAAGTCGGATGTGTCGCAGACGATCGGACATACACGCACAGGCGGCGTGTGTGGTTGAACAAGCTTGGATTCCGCACAAGCGATGTTCGATTGGCGAAGACAAACCTCGCCTAAGGTCCGATGAAGCCACAAAGCCGGGGCGAAAAATATATGTGGGGCTTGATTCCCCTTAAGGCTAGTCGTGAGCGCGTATCGATCACGACGCCGCACGGTCAAGAATGTAGGACCGTGACACACCGCCTCTTCTTCCCTACCTTCACCCACACTTGGGGCAACCTTTATTTTTCCCCATTATGCCTATTCTCACCAACCCTTCATGATGCTAAGAATAGATTTTCCTTGTGCACATCATTGATCTCACCCTTACCTATACATGATTTCTCCCTCGCTCCATTCCAACTGAGCAAAACAAAGATTCCAGTCACAAAGCAGCAGCAAAAGGTGCTTAGACAATTACAAGATTTCCAATCCTTCATCAATCACTGCCAATCTAACACCTCCATTGTTATAGATGGGTTGATAGCCCCAAAATGATTATCCTAGGTTGGAATGTTAGAAGTTTGGAGTCCTAGAAAAAAAATCCCTCATAAAGGGCCTCATCCAAAGGCTTAATCCTTCCATTGTTATCCTTTAAGAGAACGCATCTTCTTCATTGATGGGTTTTTTTATCAAATCTGTTTGGAGCTCCATTAATCTTGGACAGTTTTCTCTTGATGCCGTCGGCATTTCGGAGGAACTTTGATCCTTTGGAATGATATGCCCTTTTAAATTCTAGAGGTTATGGAAGGTGCGGACTCTCTCCCTACATATATCTATTGCTGATGGTTTCAAGTTCCAGAGTAAAAGGGTTCTTGGTCCTACTGGGGCTACTTTTTTATCACAACTTTGGCAACACCCTCATTGACTAGTATGTTGGTGGAGCTGATAACCTTTAGGCGATAGTTTATTAATCTTCAAAAAAAAGCTGTACAAAAGGGAAAACCTTAGCCTTTATTTATAAGTTCGGGTTATGGGATTATGGGATGTAAATACAAGGGTTCGCAGGCAAAACTTCTTCTATCCAGTTGACCGAATTTAATGACTCTTGGGTTTGGGGATTGGACAAGACTAGATCTTTCTCCACTAAGTCCCTAATAAGAGATTTCATACCAATTGGTGTTAAAAGGAAATAACTGCTCTATTGCACATTTTGGAAATGCAATTATCCAATGAAGGTCAAAATTTTTCTTAGGGAACTTAGCCACTCATGCTTAAGCACTCGAGGCAAGTTGCAAAATGAGGTCACATGTTTATGCCAGTCTCCCAGCTGCTCCCCCCTTGTTAAGCGATGCAGAAACAAACATCCACCTTTTGCCACTACCTACTGGAAGTCGTCTCCAATTCCTTTGGTTGGTCTCTTGTGATAACAATGGACACACACTCCAGCCTTGCTCATTTTCTGTCATCCTTTTATAGGGGAAAATAAAACTCTATGGCTTAATTTCTCAAGAGCTTTGTACTGGTCGTTATGGCTTTAGAGGAACCATCATGACGACAATCTTATTTTCAATTGGAAAACCTTGATAAAGAACGCTGGTGTGAATTATTACCTCCCTTTCATGACTACAACCTTATTTTCAATTGGAAAACCTTTGTTTTCTTTTTTTAAAACTTTCTTTAGCTTGGGGTTGGCCCTTTTTTATTATCTCATCACATCAATTAAGTCGGGTGTTTCTTATTAAATTAAAAAAAAAAAAAAACAATTCTGCATCTGGTTGAACGCGATTTTTGCTTGAGCCAGTGAGCAGTGGCATTGTCTATTAGCCAAATTATACGTATAGCTTATTCTTTATTAATAATACTATCATGATTCTGATTAACAAATGGTACTTGTTAGGAAAAGAATATTTTCCCGTTCATGCTTTCACTTTTATTCTTCCATAACTGACAATTAGTTTCTTAATTTTTTGTTCTGTGTGGATATTTATCATTTACATGGATAATTTATTTTGTCTATAATGAATGTTTGGTTTCCTGATGAAATTATATATTGGGGAAAACCACATGGTATTGGGTATTATGGTTTCAGTATGGCGCATTAGCATTGAAATATCAAGTACTTGAATATTTTTGTTGTTATGTGCTCATAATAAATTTTCCTTTTCCTACTTTCTTTTTCAGAATATGCTTGGTAGACGTCGTCATCAAGGGAAAACTTCATTTGTTGAGCACCGGACTTTTCTTCGTCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGGTATATGGCGTTTTAAATTGCTCTCTTTTTTATCCTTAGTCCTGTAAACTTTTTTTTGTTTTTTTTTTGTGGTGTTAGCCTAAATGGCATTCTCCTAGAAATTAA

mRNA sequence

ATGAATCACGAAATCCGTTGTGAGAATGATGTTCTTACACAATTGTTGGCTCTCGTTGTTTCGGAAGAAGATGTACCTTCAAAGTTTATGGATGATCAGGGTGTACCGGAGAGTATTGCTGGAGGTCGCTTCGATGCTTTGAACTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTCCAAAAGCCAACACCAAAGTCAAAGAATGCATTTCTGTAAGCCCCAGATGACAAAGAATATGCTTGGTAGACGTCGTCATCAAGGGAAAACTTCATTTGTTGAGCACCGGACTTTTCTTCGTCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGCCTAAATGGCATTCTCCTAGAAATTAA

Coding sequence (CDS)

ATGAATCACGAAATCCGTTGTGAGAATGATGTTCTTACACAATTGTTGGCTCTCGTTGTTTCGGAAGAAGATGTACCTTCAAAGTTTATGGATGATCAGGGTGTACCGGAGAGTATTGCTGGAGGTCGCTTCGATGCTTTGAACTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTCCAAAAGCCAACACCAAAGTCAAAGAATGCATTTCTGTAAGCCCCAGATGACAAAGAATATGCTTGGTAGACGTCGTCATCAAGGGAAAACTTCATTTGTTGAGCACCGGACTTTTCTTCGTCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGCCTAAATGGCATTCTCCTAGAAATTAA

Protein sequence

MNHEIRCENDVLTQLLALVVSEEDVPSKFMDDQGVPESIAGGRFDALNSVGHGIKANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQPKWHSPRN

Homology

[Close]

BLAST of Carg17997 vs. NCBI nr
Match: XP_018514638.1 (PREDICTED: callose synthase 9 isoform X2 [Brassica rapa])

HSP 1 Score: 83.2 bits (204), Expect = 6.9e-13
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 42  GRFDALNSVGHGIKANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRL 101
           GRF  L+ VGHG + +LFS++ ++ ++             GR +H+GKTSFVEHRTFL L
Sbjct: 69  GRFTPLSLVGHGGRVHLFSRNLYREKKYDL--------QTGRAKHRGKTSFVEHRTFLHL 128

Query: 102 YHSFHRLWIFLVMMFQ 118
           YHSFHRLWIFL MMFQ
Sbjct: 129 YHSFHRLWIFLAMMFQ 136

[Close]

BLAST of Carg17997 vs. NCBI nr
Match: XP_022929574.1 (LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita moschata])

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-12
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 68  RMHFCKP-QMTKNMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           R  F +P   +KNMLGR RHQGKTSFVEHRTFL LYHSFHRLWIFLVMMFQ
Sbjct: 451 RFFFQRPTPKSKNMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQ 501

[Close]

BLAST of Carg17997 vs. NCBI nr
Match: XP_011660099.1 (PREDICTED: callose synthase 9 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-12
Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 31  DDQGVPESIAGGRFDALNSVGHGIKANLFSKSQHQSQRMHFCKP-QMTKNMLGRRRHQGK 90
           +D G     A   +D  N     ++    S   H+  +  F KP   +K+MLGR RHQGK
Sbjct: 415 NDNGRAPHSAWRNYDDFNEYFWSLRCFELSWPWHKG-KSFFQKPIPKSKSMLGRSRHQGK 474

Query: 91  TSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           TSFVEHRTFL LYHSFHRLWIFLVMMFQ
Sbjct: 475 TSFVEHRTFLHLYHSFHRLWIFLVMMFQ 501

[Close]

BLAST of Carg17997 vs. NCBI nr
Match: XP_022929588.1 (callose synthase 9-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-12
Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 44  FDALNSVGHGIKANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRLYH 103
           +D  N     ++    S   H+ +         +KNMLGR RHQGKTSFVEHRTFL LYH
Sbjct: 241 YDDFNEYFWSLRCFELSWPWHKGKSFFQKPTPKSKNMLGRSRHQGKTSFVEHRTFLHLYH 300

Query: 104 SFHRLWIFLVMMFQ 118
           SFHRLWIFLVMMFQ
Sbjct: 301 SFHRLWIFLVMMFQ 314

[Close]

BLAST of Carg17997 vs. NCBI nr
Match: XP_022929596.1 (callose synthase 9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-12
Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 44  FDALNSVGHGIKANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRLYH 103
           +D  N     ++    S   H+ +         +KNMLGR RHQGKTSFVEHRTFL LYH
Sbjct: 241 YDDFNEYFWSLRCFELSWPWHKGKSFFQKPTPKSKNMLGRSRHQGKTSFVEHRTFLHLYH 300

Query: 104 SFHRLWIFLVMMFQ 118
           SFHRLWIFLVMMFQ
Sbjct: 301 SFHRLWIFLVMMFQ 314

[Close]

BLAST of Carg17997 vs. TAIR10
Match: AT3G07160.1 (glucan synthase-like 10)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 71  FCKPQMTKNM-LGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           F KP   K +  GR +H+GKTSFVEHRTFL LYHSFHRLWIFL MMFQ
Sbjct: 456 FQKPIPRKKLKTGRAKHRGKTSFVEHRTFLHLYHSFHRLWIFLAMMFQ 503

[Close]

BLAST of Carg17997 vs. TAIR10
Match: AT2G36850.1 (glucan synthase-like 8)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 84  RRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           R+   K+SFVEHRT+L L+ SF RLWIF+ +MFQ
Sbjct: 471 RKRTAKSSFVEHRTYLHLFRSFIRLWIFMFIMFQ 504

[Close]

BLAST of Carg17997 vs. TAIR10
Match: AT1G06490.1 (glucan synthase-like 7)

HSP 1 Score: 40.8 bits (94), Expect = 7.2e-04
Identity = 26/71 (36.62%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 55  KANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVM 114
           KA+ F  +   SQ      P    + +   + + KT+FVE RTF  LY SF R+W+FLV+
Sbjct: 454 KADFFIHTDEISQ-----VPNQRHDQVSHGKRKPKTNFVEARTFWNLYRSFDRMWMFLVL 513

Query: 115 MFQP----KWH 122
             Q      WH
Sbjct: 514 SLQTMIIVAWH 519

[Close]

BLAST of Carg17997 vs. TAIR10
Match: AT3G59100.1 (glucan synthase-like 11)

HSP 1 Score: 40.8 bits (94), Expect = 7.2e-04
Identity = 22/47 (46.81%), Postives = 28/47 (59.57%), Query Frame = 0


Query: 79  NMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQPK----WH 122
           N +   + + KT+FVE RTF  L+  F R+WIFLVM FQ      WH
Sbjct: 464 NQVTYGKSKPKTNFVEVRTFWNLFRDFDRMWIFLVMAFQAMVIVGWH 510

[Close]

BLAST of Carg17997 vs. Swiss-Prot
Match: sp|Q9SFU6|CALS9_ARATH (Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 71  FCKPQMTKNM-LGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           F KP   K +  GR +H+GKTSFVEHRTFL LYHSFHRLWIFL MMFQ
Sbjct: 456 FQKPIPRKKLKTGRAKHRGKTSFVEHRTFLHLYHSFHRLWIFLAMMFQ 503

[Close]

BLAST of Carg17997 vs. Swiss-Prot
Match: sp|Q9SJM0|CALSA_ARATH (Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5)

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-04
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 84  RRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           R+   K+SFVEHRT+L L+ SF RLWIF+ +MFQ
Sbjct: 471 RKRTAKSSFVEHRTYLHLFRSFIRLWIFMFIMFQ 504

[Close]

BLAST of Carg17997 vs. TrEMBL
Match: tr|A0A1S4DYC5|A0A1S4DYC5_CUCME (callose synthase 9 OS=Cucumis melo OX=3656 GN=LOC103492488 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 41/74 (55.41%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 44  FDALNSVGHGIKANLFSKSQHQSQRMHFCKPQMTKNMLGRRRHQGKTSFVEHRTFLRLYH 103
           +D  N     ++    S   H+ +         +K+MLGR RHQGKTSFVEHRTFL LYH
Sbjct: 428 YDDFNEYFWSLRCFELSWPWHKGKSFFQKPTPKSKSMLGRSRHQGKTSFVEHRTFLHLYH 487

Query: 104 SFHRLWIFLVMMFQ 118
           SFHRLWIFLVMMFQ
Sbjct: 488 SFHRLWIFLVMMFQ 501

[Close]

BLAST of Carg17997 vs. TrEMBL
Match: tr|A0A0A0LZH8|A0A0A0LZH8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604975 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-11
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 78  KNMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           ++MLGR RHQGKTSFVEHRTFL LYHSFHRLWIFLVMMFQ
Sbjct: 14  QSMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQ 53

[Close]

BLAST of Carg17997 vs. TrEMBL
Match: tr|A0A2P5BJ27|A0A2P5BJ27_PARAD (Glycosyl transferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_235080 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-11
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 71  FCKPQ-MTKNML--GRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           F KP+  +KNML  GR +HQGKTSFVEHRTFL LYHSFHRLWIFLVMMFQ
Sbjct: 454 FQKPEPKSKNMLKSGRSKHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQ 503

[Close]

BLAST of Carg17997 vs. TrEMBL
Match: tr|A0A2P5EED5|A0A2P5EED5_9ROSA (Glycosyl transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_202020 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.6e-11
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 71  FCKPQ-MTKNML--GRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           F KP+  +KNML  GR +HQGKTSFVEHRTFL LYHSFHRLW+FLVMMFQ
Sbjct: 454 FQKPKPKSKNMLKSGRSKHQGKTSFVEHRTFLHLYHSFHRLWVFLVMMFQ 503

[Close]

BLAST of Carg17997 vs. TrEMBL
Match: tr|A0A0Q3NEM2|A0A0Q3NEM2_SETIT (Uncharacterized protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_0338601mg PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 71  FCKP-QMTKNMLGRRRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMMFQ 118
           F KP +  K +LGR  H GKTSFVEHRTFL LYHSFHRLWIFL+MMFQ
Sbjct: 474 FSKPSRKEKGLLGRNHHYGKTSFVEHRTFLHLYHSFHRLWIFLIMMFQ 521

The following BLAST results are available for this feature:

BLAST of Carg17997 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_018514638.1	6.9e-13	55.26	PREDICTED: callose synthase 9 isoform X2 [Brassica rapa]	[more]
XP_022929574.1	2.6e-12	80.39	LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita moschata]	[more]
XP_011660099.1	5.9e-12	53.41	PREDICTED: callose synthase 9 [Cucumis sativus]	[more]
XP_022929588.1	5.9e-12	56.76	callose synthase 9-like isoform X1 [Cucurbita moschata]	[more]
XP_022929596.1	5.9e-12	56.76	callose synthase 9-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg17997 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07160.1	1.4e-12	72.92	glucan synthase-like 10	[more]
AT2G36850.1	1.3e-05	61.76	glucan synthase-like 8	[more]
AT1G06490.1	7.2e-04	36.62	glucan synthase-like 7	[more]
AT3G59100.1	7.2e-04	46.81	glucan synthase-like 11	[more]

BLAST of Carg17997 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SFU6\|CALS9_ARATH	2.6e-11	72.92	Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2	[more]
sp\|Q9SJM0\|CALSA_ARATH	2.4e-04	61.76	Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5	[more]

BLAST of Carg17997 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DYC5\|A0A1S4DYC5_CUCME	1.5e-11	55.41	callose synthase 9 OS=Cucumis melo OX=3656 GN=LOC103492488 PE=4 SV=1	[more]
tr\|A0A0A0LZH8\|A0A0A0LZH8_CUCSA	3.3e-11	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604975 PE=4 SV=1	[more]
tr\|A0A2P5BJ27\|A0A2P5BJ27_PARAD	5.6e-11	80.00	Glycosyl transferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_235080 PE=4 ...	[more]
tr\|A0A2P5EED5\|A0A2P5EED5_9ROSA	9.6e-11	78.00	Glycosyl transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_202020 PE=4 SV=1	[more]
tr\|A0A0Q3NEM2\|A0A0Q3NEM2_SETIT	2.1e-10	75.00	Uncharacterized protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_0338601mg...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17997-RA	Carg17997-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12741:SF12	CALLOSE SYNTHASE 9	coord: 75..117
None	No IPR available	PANTHER	PTHR12741	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	coord: 75..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17997	Cla97C03G064110	Watermelon (97103) v2	carwmbB0178
Carg17997	Bhi02G001365	Wax gourd	carwgoB0221

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17997	Silver-seed gourd	carcarB207
Carg17997	Silver-seed gourd	carcarB208
Carg17997	Silver-seed gourd	carcarB209
Carg17997	Cucumber (Gy14) v2	carcgybB0186
Carg17997	Cucumber (Gy14) v1	carcgyB0212
Carg17997	Cucurbita maxima (Rimu)	carcmaB0230
Carg17997	Cucurbita maxima (Rimu)	carcmaB0231
Carg17997	Cucurbita moschata (Rifu)	carcmoB0240
Carg17997	Cucurbita moschata (Rifu)	carcmoB0241
Carg17997	Cucurbita pepo (Zucchini)	carcpeB0247
Carg17997	Cucurbita pepo (Zucchini)	carcpeB0248
Carg17997	Wild cucumber (PI 183967)	carcpiB0199
Carg17997	Cucumber (Chinese Long) v2	carcuB0192
Carg17997	Cucumber (Chinese Long) v3	carcucB0199
Carg17997	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg17997	Melon (DHL92) v3.5.1	carmeB0178
Carg17997	Melon (DHL92) v3.6.1	carmedB0182
Carg17997	Watermelon (Charleston Gray)	carwcgB0165
Carg17997	Watermelon (97103) v1	carwmB0163