Carg17977 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17977
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein
Location	Cucurbita_argyrosperma_scaffold_171 : 97312 .. 104153 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCAGATGAGGCAAATTCATGCCCAAATGGTTTCAACTGGCTTGATCTCAGATGGGTTTGCACTGAGTCGCCTTGTTGCGTTCTGTGCGATTTCTGAGTGGCGAAATCTTGACTATTGTGACAAACTTCTCGACAATGCTCCCAACCCGAATATTTTTTCTTGGAATGTGGCGATTAGGGGTTATTTAGAGAGTGAGAATCCCAGAAATGCTGTTTTTTTGTACAGGAAAATGCTGAGAAAAGGTGGGTCTATTCCTGATAATTATTCTTATCCTCTGTTGTTTAAAGCTTGTGCTGGTTTGTCGTTGAGTTTCACGGCTAATGAGATTCTTGGGCATGTAGTACATTTGGGTTTTTATTCGGATTTGTTTGTGCACAATGCGATTATTCATGTACTGGTTTCTTGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGACGAAAGTTGCGTGAGAGATTTGGTTTCTTGGAACTCGATGATCAATGGGTATGTTAGGTGTGGGTTGGCGGACGAGGCATTGAATCTTTATTACAAGATGGAGGATCTGAAAGTGAAGCCAGATGAGGTCACAATGATTGGACTCGTTTCAGCTTCTGCCCAGCTTGAAAATGTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGGTTTGAATTTGACCATTCCACTTGTCAATGCATTGATGGATATGTACATTAAGTGTAAGAATATTGAGGCTGCAGAAACACTATTTGAGAACATGACAAAGAAAACCATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATGTGGGATGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTCGTGCCATGGAATGCTTTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGACCCAGATGAGGTTACTGTCGTTAGTTGTTTATCTGCATGCTCTCAACTTGGAGCACTAGATGTTGGAATTTGGATGCATCGTTTCGTTGATAAACAAAATCTTACTATGAACGTTGCCTTAGGAACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAAGGCTCTACAGGTTTTTGAGGAGATGCCAGGAAGAAACTCATTGACATGGACAGCTATAATATGTGGTCTAGCACTTCATGGACAAGCACATGCTGCCATATCTTACTTCTCGGAGATGGTTAGCATTGGACTTGTGCCTGATGAGATCACCTTCATTGGGGTCTTATCGGCTTGTTGTCACGGTGGATTGGTTGATCAAGGTCGACACTATTTTTATCAAATGAGCTCCAAATATGGTATCTGCCCAAAACTTAAGCATTATTCTTGCATGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAGGCAGAAGAGATTATTAGGAGCATGCCTTTTGAGGCAGATGCCGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGTATGCATGGAAATGTTCATATAGGAGAACGAGCGGCTTTTAAGCTTCTTGAGTTGGATCCTCATGACAGTGGAATTTATGTTTTGCTTGCAAATATGTATGGTGATGCTAATATGTGGGAGAAGGCAAGGAAGGTAAGAAAGATGATGGAACAAAGAGGGGTCGAGAAAACACCTGGTTGTAGTTCAATTGAGATTAATGGTTTAGTTTATGAGTTTATAATTCGTGATAAGTCACATCCTCGATCGGAGAAAATTTACGAGTGTTTAACTTGGTTAACAAGACAGCTTGAACTTGTTGAGGATGAAACATCTTCATTGAAAGAATTTTGAGGTGGTCATATTTGAGTTGACAAGGAGTAGGGCTCTAAAATATGCTCGACCAAGCTCCCTCTCCCACAGCTAGCCTCGAGTCGGTGAAGTCTTTCGATGATTAGTGAGAGATCAACTCTGAATATATTACAAAGAGTGGGGCTCTCCAACACCTCGGTTCAAAAAAGAATATTTAATAAAAGAATGCTTTCTAGTCTAGAAGTGATTCTGAAGAGCCTTTGTTACCTTGAGATGATGAAGGTCTACCTCTCAAAGCCCACAAAGCTTCTGCAGAAGGATAATCACTTGAATCTTCTGAATGGTAAGAATTTGTTCTGTACTGTAAGCAATGAGCTCCTTTCAAGCCTTTTCAGTTTCTTGACTTTTTGCATTTTCTTGTCCAGTTATAGTTGAAGCATGGCATCTTGGAAAAAGCTTCCAATAATTGAAATGAAAGCTAAACATGTCCATATTCAGCTCATTTATTCTTGCCTCACCCATTCTATAACAAGTCACCAGCGGGTTTTTGTCGATAAGCTTCATTGAAGCATATGTAATGGTGGTTGGTGGGTATGATGATTCAGGTTTATGTGCTCAACGCTAGTAGCATCTCGATTTTTTAAACCATTTTATACGTGTAAACCATGTCCCTTTGATTCCTTTGGATGAAGCAATTTTGAGATGGAGGTAGAACATAAATAGGTTTAAATCTTATTTTGGTCTCAAAACGTTCATGTACATCTTATTTTGTGCTCAAATCGTTCATGTCCTCGAACATTCAAATGTTATCTTCTAAGTCTAGAGATGAAAATAGAATATTTGAAGTTAAATAAAAGACTAAATAAAACTATTAAAAGTTTTAACACCAAAATAAGATTTAAACCATATATTAAAGTTTAATCTATAGTATCATATGGTTATGGTCGTGTGGGGAACTCATTATGTTGACTTCGTGTGCTGCGTCACATTGTGACCACGAAACCCGAAATTGTTAAGGACCTTATTTGCTCTCCTCTGACTTTTGTCTTATGTACATTATCTGTTTGATCATCAAAGTGATTTTATTCTCCTTCCCCAGATTTTGGAACTGGCCTGCCAAGTGTTAAAGTGCCCACAGGAAGGAAAGGCTTTTTAGAATCATGTTCTGAAAAATGACCTTGTGGTAGGGATCGCATCAAAAGAAATAAAGCTCAATCCATGTGTTCAGTGTAACTGGGTCAGAGGGAAGACACAAAGATTGCCATCGACAAAATTGGCCCGACACTGACATTGAGAGGTGAAAGACGAGGAGCGAATGGATATTAGGTATTGTGCATATCGACTTTTGTGCAATACTTAGAGTATCACATTAGTGGGGAACGTGTGAAGTCTCATCTGAGATATCTCAGGAAGAAGATGAAAAAATCGTGGTCATCTCATAACCCATTGACATGAGGTATGTTATTTCTTGCAAATCAAGTGTCATGATTCATGGAACCATATATTCCAGGTTGTTTACGTGATTTTTCATAATATATTTACAGTCCCTTTTTGTGATACATGTTACTGATGATCAAAGTAGAAGTCGTTTTGTATTATATTTAAGGGATTTCTGTGTTAGGAGTGAAGAAATTCTTTTATGTTCCATTAAGAAAGAACGACAATGAACATAGTTGTTTGAATTTTAGAAAAGTTAAAGGTTAGGGTTGAGATGGAGATTAGGATGGAGATGTGTTGTACACTATAACGATTAAAAAGGTGGAGGATAAGTCTAGGGTGAAGATCCTATTTGGAAAAGGAATGCAGAATATATAATCAATTAAAGAAATTCAAAGTCAATGCCAGAGTTGAGGGTTGGGACCTCATAATTATAAAGAGTTTCAAGAACAAGGACACAGAATATCTAATAAAAGTTCACAAGTAACTTTTTCTTAAAATAAAGTTGGGACTGAGGTTGGAGAGAGTTAGAGAAGTGTAACATGTAAGAATAATTACAAAACATTTAACAGTCAAGATAAGTATTGGTGTAATAGCCCGAGCCCGTCGCTAGTAGATATTGTCTTTTTTTGGGCCATTTTCCTTTGGGTTTCTCCTCAAGGTTTTTAAAACGCGTCTTTTAGGGAAAGGTTTCTACACCCTTATAAATAATGTTTCGTTCTCCTCTCCAACCGATGTAGGATTTCACAATCCACCCCTCTTTGGGCCCAGCATCCTTGCTAGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCCCTTTGGGGCCCAGCGTTCTTGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCAATCCGCCCCCCTTCGAGGCCTAGCATCCTTGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACTCCCCCCCCCCCAATCCGCTCCCCTTCGGGGCCCAGTGTCCTTGTTGACCACCCCACTTCGAGGCTTAGCTTCCTCGCTAGCATATCGCCCGGTGTCTGACTTTGATATCATTTGTAACGGCTCAAGTCCACCACTAGCAGATATTGTCCTATTTGAGCTTTCCCTTTTGGACTTCCCCTCAAGCTTTTTAAAACACGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCGTCGTTCTCCTCTCCACCGATGTGGGATCTTATAATTGGGATCTAAGACACAAAACAAGCTATAAACTAACAACCAAAAAATTTAGGATCAAAGTCAAGGATATGTTATTCATTGTAGTAATTTTTAGTAAAGCTTAGGCTTGAATAAAGATTGAGTTTAAAGTGGGCGAGTACCTCGTGCCCTTATTTCCTACCCATCCACCTATCTCACTTTCAAGTACATAATACTATTTTACTAAAGGTCATTCAAACTCTTTGAAGAAGACACCCTCCAATGCTTGATCGAGTACTCACCAAGTTCCTAAAGTACACTAACTTATCCCTCCGTCGAAAGACTAACGCACTCCTCGAAATATGAATGAGGCCTCGATGTGGATTACTTTAGTGTTGTTGTACAAGATAGTTAGCCAAACTACTTCCTATCTCTTAACCCAGAAAACATTTCAAATGTAGATCTTCAGATTTCGAGTGAAGTCAATAAAATTAGATCACCGAACGAGTAATTGTCACAACCACTATAGTTTCCAAAGGATTGAAGCATTGAAAGGTGAAAAACTGTGCCATGATTGATTTGTTAAAGGGAAAAGAAATAGTAATGAGAGAAGAGAGTGGATGTGCGATGCAGTTGTAGCAGATTAGGGAACAGAAGGAATAAAGAATAATATTCAGTGGTTGTCCTTTGCCTCCGCCTCAGGGTTTGGTCTTTCTCTTTCTGTTCCAGTTTCACATGTCTAAGTCTCTCAACTCTGACTGAAAAAGCAGTGTCTTATGTCCCATTTGCTAGGAGTTTTGTGATTGCTTTCTCCCATGCCAGACACCATCATCCAAATTGATTGGATTGACACCCATAAGCACACTCAATTGCCCAACTAGTATTGAATCATCATTCTATTATTATTATTTTCCGCTGTTCATTAACTTTTCTGGTCCTCCTAGATTTAGCTCGTGTTTCTAAATGTTTAGCGATTTAGTCTATGAACTTTGGTACGTAACCATTTCGTCTGGGTAGTTTAATCTTCGTAGTGATTTAGTTTATGTTGCAAATACTGGTAATGTCTAGCGGAGTCCCTTGTGTATATAGATTGATAAGTTGTCTAGAGGTCGAGGCCCTGACATTTAAAGTTTTCGTTGTGTGTTAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCGTTTATAAGGGTGTGAAAACCTCTCCCTGACAGACGCGTTTCAAAAACCTTGAGGGGAAGTCCGAAGGAGAAAGTCCAAAGAGGACAATATCTATACTAGCGGTGGGTTTGAACTGTAACAAATGGTATCAGAGCCACGCACCGAGCGATGTGCCTGCGAGGAGACTATTCTCCGAAGGGGAGTAGACACGAGGCAGTGTGCCAGTAAGGACGCTGGGCCTCAAAGGGGGGGTGGATCGTTAGATCCCACATCGGTTGGAGAGGAGAACAAAACGCCTTTATAAGGGTATGGAAACCTCTCCCTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAAGCCCCCAAAGAGGACAATATCTGCTAGCGATGGGCTTGGGCCGTTACAAATAGTATCAGAGCCAGACACCGGGCGATATGCCAGCGAGGAGGTTGTCCCCCAAAGGAGGGTAGTAGACACAAGGCGGTGTGCTAGTAAGGACGCTAGGCCTCGAAGGGGGGTGGATTGTTAGATCTCACATCGGTTGGGGAGGAAAACGAAACGCCCTTTATAAGGGTGTGAAAATCTTTTCCTAGCATACGCATTTTAAAAACCTTGAGAGGAAGCTCGAAAGGGAAAAGCTCAAAGAAGACAATATCTGCTAACGGTGGGCCTGAGCCATTACATTGTCATTGCCTACAAAGAGTTCCCCACAAGCCAAATTTAAAACGTGAAGAGCTCGATATGAACTTTCTAAACCATCTTGAAAAGCACCAAAAACATCAAGAACTAAAGCATAGACTTACTTTTATTTCACTCAACCACTTGGCCTTTTTAGATATACCCTTTACTTTAATCTCTATTTCAATATGATATCCATATTCTTTTTAGTTACTTGTAGAATTTGGGTCCATATTTTAAAGCATTTGCCTTGATTCAAAAGCAGAAAAGAGGACCAATGAGGTAATGAGCATTAAGAATTGCTTTGAGGTATGCAAGCATATACTTATTCCAATGTGTCTATCAACCTATGTTCATTCATTATGTCTTATGGAATCCAATGCATCGATACGTCCTAGAGATCCCATATACAACTAGGTCACGACGCTTAATGTCAACTTATAGTCAAAACTTAGCTTTTATCTACATAGTACGTTGTGATCATTAGAGCTCGTTTCGCACCTTAGTCTGCTAAGATTCATTAAGATGACAAAATCACTGCACTTCGTTCAGGTCGTTTGATAATCCATTTTTGAACGAAGCATAA

mRNA sequence

ATGGCGCAGATGAGGCAAATTCATGCCCAAATGGTTTCAACTGGCTTGATCTCAGATGGGTTTGCACTGAGTCGCCTTGTTGCGTTCTGTGCGATTTCTGAGTGGCGAAATCTTGACTATTGTGACAAACTTCTCGACAATGCTCCCAACCCGAATATTTTTTCTTGGAATGTGGCGATTAGGGGTTATTTAGAGAGTGAGAATCCCAGAAATGCTGTTTTTTTGTACAGGAAAATGCTGAGAAAAGGTGGGTCTATTCCTGATAATTATTCTTATCCTCTGTTGTTTAAAGCTTGTGCTGGTTTGTCGTTGAGTTTCACGGCTAATGAGATTCTTGGGCATGTAGTACATTTGGGTTTTTATTCGGATTTGTTTGTGCACAATGCGATTATTCATGTACTGGTTTCTTGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGACGAAAGTTGCGTGAGAGATTTGGTTTCTTGGAACTCGATGATCAATGGGTATGTTAGGTGTGGGTTGGCGGACGAGGCATTGAATCTTTATTACAAGATGGAGGATCTGAAAGTGAAGCCAGATGAGGTCACAATGATTGGACTCGTTTCAGCTTCTGCCCAGCTTGAAAATGTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGAATATTGAGGCTGCAGAAACACTATTTGAGAACATGACAAAGAAAACCATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATGTGGGATGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTCGTGCCATGGAATGCTTTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGACCCAGATGAGGTTACTGTCGTTAGTTGTTTATCTGCATGCTCTCAACTTGGAGCACTAGATGTTGGAATTTGGATGCATCGTTTCGTTGATAAACAAAATCTTACTATGAACGTTGCCTTAGGAACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAAGGCTCTACAGAATTTGGGTCCATATTTTAAAGCATTTGCCTTGATTCAAAAGCAGAAAAGAGGACCAATGAGGTCGTTTGATAATCCATTTTTGAACGAAGCATAA

Coding sequence (CDS)

ATGGCGCAGATGAGGCAAATTCATGCCCAAATGGTTTCAACTGGCTTGATCTCAGATGGGTTTGCACTGAGTCGCCTTGTTGCGTTCTGTGCGATTTCTGAGTGGCGAAATCTTGACTATTGTGACAAACTTCTCGACAATGCTCCCAACCCGAATATTTTTTCTTGGAATGTGGCGATTAGGGGTTATTTAGAGAGTGAGAATCCCAGAAATGCTGTTTTTTTGTACAGGAAAATGCTGAGAAAAGGTGGGTCTATTCCTGATAATTATTCTTATCCTCTGTTGTTTAAAGCTTGTGCTGGTTTGTCGTTGAGTTTCACGGCTAATGAGATTCTTGGGCATGTAGTACATTTGGGTTTTTATTCGGATTTGTTTGTGCACAATGCGATTATTCATGTACTGGTTTCTTGTGGAGAATTGTTGGCTGCACGTAAGGTGTTCGACGAAAGTTGCGTGAGAGATTTGGTTTCTTGGAACTCGATGATCAATGGGTATGTTAGGTGTGGGTTGGCGGACGAGGCATTGAATCTTTATTACAAGATGGAGGATCTGAAAGTGAAGCCAGATGAGGTCACAATGATTGGACTCGTTTCAGCTTCTGCCCAGCTTGAAAATGTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGAATATTGAGGCTGCAGAAACACTATTTGAGAACATGACAAAGAAAACCATTGTTTCATGGACTACAATGGTTGTTGGATATGCCAAATGTGGGATGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTCGTGCCATGGAATGCTTTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTCTGTTTCATGAAATGCAAGCCAGCAATGTTGACCCAGATGAGGTTACTGTCGTTAGTTGTTTATCTGCATGCTCTCAACTTGGAGCACTAGATGTTGGAATTTGGATGCATCGTTTCGTTGATAAACAAAATCTTACTATGAACGTTGCCTTAGGAACTGCTCTAGTTGACATGTATGCTAAGTGTGGGAACATAAAAAAGGCTCTACAGAATTTGGGTCCATATTTTAAAGCATTTGCCTTGATTCAAAAGCAGAAAAGAGGACCAATGAGGTCGTTTGATAATCCATTTTTGAACGAAGCATAA

Protein sequence

MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEMNIEAAETLFENMTKKTIVSWTTMVVGYAKCGMLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTALVDMYAKCGNIKKALQNLGPYFKAFALIQKQKRGPMRSFDNPFLNEA

Homology

[Close]

BLAST of Carg17977 vs. NCBI nr
Match: XP_022927674.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita moschata] >XP_022927681.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita moschata] >XP_022927688.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita moschata] >XP_022927696.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita moschata] >XP_022927700.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita moschata])

HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155
Identity = 345/378 (91.27%), Postives = 346/378 (91.53%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI
Sbjct: 67  MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF
Sbjct: 127 RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
           YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK
Sbjct: 187 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           MEDLKVKPDEVTMIG+VSASAQLENVALGRKLHQFIEEM                    N
Sbjct: 247 MEDLKVKPDEVTMIGVVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAAETLFENMTKKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAETLFENMTKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXX VVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXXXXVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 426

[Close]

BLAST of Carg17977 vs. NCBI nr
Match: XP_023531862.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.7 bits (1410), Expect = 3.1e-152
Identity = 340/378 (89.95%), Postives = 343/378 (90.74%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           M QMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPN+FSWNVAI
Sbjct: 67  MTQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNVFSWNVAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGYLESENPR AVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF
Sbjct: 127 RGYLESENPRYAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
            SDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNS+INGYVRCGLADEALNLYYK
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALNLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           ME+LKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM                    N
Sbjct: 247 MEELKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAAETLFENMTKKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAETLFENMTKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMH FVDKQNLTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHHFVDKQNLTMNVALG 426

[Close]

BLAST of Carg17977 vs. NCBI nr
Match: XP_022966942.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita maxima] >XP_022966951.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita maxima] >XP_022966960.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita maxima])

HSP 1 Score: 544.7 bits (1402), Expect = 2.6e-151
Identity = 338/378 (89.42%), Postives = 341/378 (90.21%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           M QMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAP+PN+FSWNVAI
Sbjct: 67  MTQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPSPNVFSWNVAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGYLESENPRNAV LYRKMLRKGGS PDNYSYPLLFKACAGLSLSFTANEILGHVV LG 
Sbjct: 127 RGYLESENPRNAVLLYRKMLRKGGSTPDNYSYPLLFKACAGLSLSFTANEILGHVVQLGL 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
           YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK
Sbjct: 187 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQF EEM                    N
Sbjct: 247 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFTEEMGLNLTIPLVNALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAA+TLFENMTKKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAKTLFENMTKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 426

[Close]

BLAST of Carg17977 vs. NCBI nr
Match: XP_008450440.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 9.7e-138
Identity = 308/378 (81.48%), Postives = 329/378 (87.04%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           MAQM+QIHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA NPN+FSWN+AI
Sbjct: 67  MAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY+ESENPR AV LYR MLRKG + PDNY+YPLLFK CAG SLS TANEILGHV+ LGF
Sbjct: 127 RGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGF 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
            SDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNS+INGYVRCGLADEAL+LYYK
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           M +L V PDEVTMIG+VSASAQLEN+ALGRKLHQFIEEM                    N
Sbjct: 247 MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAA+ LFENM KKT+VSWT MVV       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAKILFENMPKKTVVSWTIMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXX  T V+CLSACSQLGALDVGIWMH +VDK +LTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALG 426

[Close]

BLAST of Carg17977 vs. NCBI nr
Match: XP_022154126.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154127.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154128.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia] >XP_022154129.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica charantia])

HSP 1 Score: 498.4 bits (1282), Expect = 2.2e-137
Identity = 310/378 (82.01%), Postives = 329/378 (87.04%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           MAQM+Q+ AQM+STG ISDGFALSRLVAFCAISEWRNLDYCDK+LDNA NPN+FSWNVAI
Sbjct: 68  MAQMKQVQAQMISTGFISDGFALSRLVAFCAISEWRNLDYCDKILDNAENPNVFSWNVAI 127

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY ESENPRNAV +YRKMLRKGGS PDNY+YPLLFKACAGLSL FTA EILGH + LGF
Sbjct: 128 RGYSESENPRNAVLMYRKMLRKGGSTPDNYTYPLLFKACAGLSLGFTAGEILGHALQLGF 187

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
            SDLFVHNAIIHVLVSCGELLAARKVFDES VRDLVSWNSMINGYVRCGLA+EALNLYYK
Sbjct: 188 DSDLFVHNAIIHVLVSCGELLAARKVFDESRVRDLVSWNSMINGYVRCGLANEALNLYYK 247

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           ME+LKV PDEVTMIG+VSASAQLE++ LGRKLHQFIEEM                    N
Sbjct: 248 MEELKVMPDEVTMIGVVSASAQLEDLTLGRKLHQFIEEMGLNLTVPLTNSLMDMYIKCGN 307

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IE A+TLFENMTKKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 308 IEPAKTLFENMTKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXX TVVSCLSACSQLGALDVGIWMH +V+K NL++NVALG
Sbjct: 368 XXXXXXXXXXXXXXXXXXXXXXITVVSCLSACSQLGALDVGIWMHHYVEKHNLSVNVALG 427

[Close]

BLAST of Carg17977 vs. TAIR10
Match: AT2G22410.1 (SLOW GROWTH 1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-79
Identity = 206/379 (54.35%), Postives = 260/379 (68.60%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           +  ++QI AQM+  GLI D FA SRL+AFCA+SE R LDY  K+L    NPNIFSWNV I
Sbjct: 66  LLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTI 125

Query: 61  RGYLESENPRNAVFLYRKMLRKG--GSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHL 120
           RG+ ESENP+ +  LY++MLR G   S PD+++YP+LFK CA L LS   + ILGHV+ L
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185

Query: 121 GFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLY 180
                  VHNA IH+  SCG++  ARKVFDES VRDLVSWN +INGY + G A++A+ +Y
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY 245

Query: 181 YKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM------------------- 240
             ME   VKPD+VTMIGLVS+ + L ++  G++ +++++E                    
Sbjct: 246 KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC 305

Query: 241 -NIEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            +I  A  +F+N+ K                  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 GDIHEARRIFDNLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVA 358
           XXXXXXXXXXXXXXXX         T++ CLSACSQLGALDVGIW+HR+++K +L++NVA
Sbjct: 366 XXXXXXXXXXXXXXXXTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA 425

[Close]

BLAST of Carg17977 vs. TAIR10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-42
Identity = 105/326 (32.21%), Postives = 152/326 (46.63%), Query Frame = 0


Query: 52  NIFSWNVAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEI 111
           N+FSWNV + GY +      A+ LY +ML  GG  PD Y++P + + C G+       E+
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218

Query: 112 LGHVVHLGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLA 171
             HVV  G+  D+ V NA+I + V CG++ +AR +FD    RD++SWN+MI+GY   G+ 
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278

Query: 172 DEALNLYYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFI--------------- 231
            E L L++ M  L V PD +T+  ++SA   L +  LGR +H ++               
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338

Query: 232 EEMNIEA-----AETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXX 291
            +M + A     AE LF  M +K IVSWTTM+ GY                         
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY------------------------- 398

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQ 351
                                           TV + LSAC+ LG LD G+ +H+   K 
Sbjct: 399 ------EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 453

Query: 352 NLTMNVALGTALVDMYAKCGNIKKAL 358
            L   V +   L++MY+KC  I KAL
Sbjct: 459 RLISYVIVANNLINMYSKCKCIDKAL 453

[Close]

BLAST of Carg17977 vs. TAIR10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 105/375 (28.00%), Postives = 173/375 (46.13%), Query Frame = 0


Query: 5   RQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNP-NIFSWNVAIRGY 64
           +QI  Q+++  L+ D   ++++V F   S      Y   +L +  +  + FS+N  +  Y
Sbjct: 23  KQIQTQLITRDLLRDDLIINKVVTFLGKSA-DFASYSSVILHSIRSVLSSFSYNTLLSSY 82

Query: 65  LESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGFYSD 124
              + PR  +F Y+  +  G S PD +++P +FKAC   S      +I G V  +GFY D
Sbjct: 83  AVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDD 142

Query: 125 LFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYKMED 184
           ++V N+++H    CGE   A KVF E  VRD+VSW  +I G+ R GL  EAL+ + KM+ 
Sbjct: 143 IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD- 202

Query: 185 LKVKPDEVTMIGLVSASAQLENVALGRKLH--------------------QFIEEMNIEA 244
             V+P+  T + ++ +S ++  ++LG+ +H                     +++   +  
Sbjct: 203 --VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSD 262

Query: 245 AETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           A  +F  + KK  VSW +M+ G   C                                  
Sbjct: 263 AMRVFGELEKKDKVSWNSMISGLVHC------------------------------ERSK 322

Query: 305 XXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTAL 359
                                + S LSAC+ LGA+D G W+H ++    +  +  +GTA+
Sbjct: 323 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 362

[Close]

BLAST of Carg17977 vs. TAIR10
Match: AT3G05240.1 (mitochondrial editing factor 19)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 97/364 (26.65%), Postives = 174/364 (47.80%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFC-AISEWRNLDYCDKLLDNAPNPNIFSWNVA 60
           + ++ Q+H  M+ + +I +   LSRL+ FC    E  NL Y   + ++   P+++ WN  
Sbjct: 19  LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSM 78

Query: 61  IRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLG 120
           IRGY  S NP  A+  Y++MLRKG S PD +++P + KAC+GL      + + G VV  G
Sbjct: 79  IRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 138

Query: 121 FYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYY 180
           F  +++V   ++H+ + CGE+    +VF++    ++V+W S+I+G+V      +A+  + 
Sbjct: 139 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 198

Query: 181 KMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEMNIEAAETLFENMTKKTIVSW 240
           +M+   VK +E  M+ L+ A  + +++  G+  H F++ +     +  F++     ++  
Sbjct: 199 EMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF---DPYFQSKVGFNVILA 258

Query: 241 TTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           T+++  YAKCG                                                 
Sbjct: 259 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 318

Query: 301 XXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTALVDMYAKCG---NIKKA 360
               T +S + A    G   +G  +H +V K     + A+  ALV+MYAK G   + KKA
Sbjct: 319 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 378

[Close]

BLAST of Carg17977 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 92/273 (33.70%), Postives = 147/273 (53.85%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAIS--EWRNLDYCDKLLDNAPNP-NIFSWN 60
           + ++RQIHA  +  G+      L + + F  +S      + Y  K+      P N+F WN
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 61  VAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVH 120
             IRGY E  N  +A  LYR+M   G   PD ++YP L KA   ++       I   V+ 
Sbjct: 90  TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149

Query: 121 LGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNL 180
            GF S ++V N+++H+  +CG++ +A KVFD+   +DLV+WNS+ING+   G  +EAL L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209

Query: 181 YYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM------------------ 240
           Y +M    +KPD  T++ L+SA A++  + LG+++H ++ ++                  
Sbjct: 210 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269

Query: 241 --NIEAAETLFENMTKKTIVSWTTMVVGYAKCG 251
              +E A+TLF+ M  K  VSWT+++VG A  G
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302

[Close]

BLAST of Carg17977 vs. Swiss-Prot
Match: sp|Q9SJZ3|PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.0e-78
Identity = 206/379 (54.35%), Postives = 260/379 (68.60%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           +  ++QI AQM+  GLI D FA SRL+AFCA+SE R LDY  K+L    NPNIFSWNV I
Sbjct: 66  LLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTI 125

Query: 61  RGYLESENPRNAVFLYRKMLRKG--GSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHL 120
           RG+ ESENP+ +  LY++MLR G   S PD+++YP+LFK CA L LS   + ILGHV+ L
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185

Query: 121 GFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLY 180
                  VHNA IH+  SCG++  ARKVFDES VRDLVSWN +INGY + G A++A+ +Y
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY 245

Query: 181 YKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM------------------- 240
             ME   VKPD+VTMIGLVS+ + L ++  G++ +++++E                    
Sbjct: 246 KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC 305

Query: 241 -NIEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            +I  A  +F+N+ K                  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 306 GDIHEARRIFDNLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVA 358
           XXXXXXXXXXXXXXXX         T++ CLSACSQLGALDVGIW+HR+++K +L++NVA
Sbjct: 366 XXXXXXXXXXXXXXXXTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA 425

[Close]

BLAST of Carg17977 vs. Swiss-Prot
Match: sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.7e-41
Identity = 105/326 (32.21%), Postives = 152/326 (46.63%), Query Frame = 0


Query: 52  NIFSWNVAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEI 111
           N+FSWNV + GY +      A+ LY +ML  GG  PD Y++P + + C G+       E+
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218

Query: 112 LGHVVHLGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLA 171
             HVV  G+  D+ V NA+I + V CG++ +AR +FD    RD++SWN+MI+GY   G+ 
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278

Query: 172 DEALNLYYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFI--------------- 231
            E L L++ M  L V PD +T+  ++SA   L +  LGR +H ++               
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338

Query: 232 EEMNIEA-----AETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXX 291
            +M + A     AE LF  M +K IVSWTTM+ GY                         
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY------------------------- 398

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQ 351
                                           TV + LSAC+ LG LD G+ +H+   K 
Sbjct: 399 ------EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 453

Query: 352 NLTMNVALGTALVDMYAKCGNIKKAL 358
            L   V +   L++MY+KC  I KAL
Sbjct: 459 RLISYVIVANNLINMYSKCKCIDKAL 453

[Close]

BLAST of Carg17977 vs. Swiss-Prot
Match: sp|Q9SZK1|PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-38
Identity = 105/375 (28.00%), Postives = 173/375 (46.13%), Query Frame = 0


Query: 5   RQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNP-NIFSWNVAIRGY 64
           +QI  Q+++  L+ D   ++++V F   S      Y   +L +  +  + FS+N  +  Y
Sbjct: 23  KQIQTQLITRDLLRDDLIINKVVTFLGKSA-DFASYSSVILHSIRSVLSSFSYNTLLSSY 82

Query: 65  LESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGFYSD 124
              + PR  +F Y+  +  G S PD +++P +FKAC   S      +I G V  +GFY D
Sbjct: 83  AVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDD 142

Query: 125 LFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYKMED 184
           ++V N+++H    CGE   A KVF E  VRD+VSW  +I G+ R GL  EAL+ + KM+ 
Sbjct: 143 IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD- 202

Query: 185 LKVKPDEVTMIGLVSASAQLENVALGRKLH--------------------QFIEEMNIEA 244
             V+P+  T + ++ +S ++  ++LG+ +H                     +++   +  
Sbjct: 203 --VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSD 262

Query: 245 AETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           A  +F  + KK  VSW +M+ G   C                                  
Sbjct: 263 AMRVFGELEKKDKVSWNSMISGLVHC------------------------------ERSK 322

Query: 305 XXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTAL 359
                                + S LSAC+ LGA+D G W+H ++    +  +  +GTA+
Sbjct: 323 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 362

[Close]

BLAST of Carg17977 vs. Swiss-Prot
Match: sp|Q9MA95|PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-38
Identity = 97/364 (26.65%), Postives = 174/364 (47.80%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFC-AISEWRNLDYCDKLLDNAPNPNIFSWNVA 60
           + ++ Q+H  M+ + +I +   LSRL+ FC    E  NL Y   + ++   P+++ WN  
Sbjct: 19  LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSM 78

Query: 61  IRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLG 120
           IRGY  S NP  A+  Y++MLRKG S PD +++P + KAC+GL      + + G VV  G
Sbjct: 79  IRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 138

Query: 121 FYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYY 180
           F  +++V   ++H+ + CGE+    +VF++    ++V+W S+I+G+V      +A+  + 
Sbjct: 139 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 198

Query: 181 KMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEMNIEAAETLFENMTKKTIVSW 240
           +M+   VK +E  M+ L+ A  + +++  G+  H F++ +     +  F++     ++  
Sbjct: 199 EMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF---DPYFQSKVGFNVILA 258

Query: 241 TTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           T+++  YAKCG                                                 
Sbjct: 259 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 318

Query: 301 XXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALGTALVDMYAKCG---NIKKA 360
               T +S + A    G   +G  +H +V K     + A+  ALV+MYAK G   + KKA
Sbjct: 319 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 378

[Close]

BLAST of Carg17977 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-38
Identity = 92/273 (33.70%), Postives = 147/273 (53.85%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAIS--EWRNLDYCDKLLDNAPNP-NIFSWN 60
           + ++RQIHA  +  G+      L + + F  +S      + Y  K+      P N+F WN
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 61  VAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVH 120
             IRGY E  N  +A  LYR+M   G   PD ++YP L KA   ++       I   V+ 
Sbjct: 90  TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149

Query: 121 LGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNL 180
            GF S ++V N+++H+  +CG++ +A KVFD+   +DLV+WNS+ING+   G  +EAL L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209

Query: 181 YYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM------------------ 240
           Y +M    +KPD  T++ L+SA A++  + LG+++H ++ ++                  
Sbjct: 210 YTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269

Query: 241 --NIEAAETLFENMTKKTIVSWTTMVVGYAKCG 251
              +E A+TLF+ M  K  VSWT+++VG A  G
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302

[Close]

BLAST of Carg17977 vs. TrEMBL
Match: tr|A0A1S3BP74|A0A1S3BP74_CUCME (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492040 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 6.4e-138
Identity = 308/378 (81.48%), Postives = 329/378 (87.04%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           MAQM+QIHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA NPN+FSWN+AI
Sbjct: 67  MAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY+ESENPR AV LYR MLRKG + PDNY+YPLLFK CAG SLS TANEILGHV+ LGF
Sbjct: 127 RGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGF 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
            SDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNS+INGYVRCGLADEAL+LYYK
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           M +L V PDEVTMIG+VSASAQLEN+ALGRKLHQFIEEM                    N
Sbjct: 247 MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAA+ LFENM KKT+VSWT MVV       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAKILFENMPKKTVVSWTIMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXX  T V+CLSACSQLGALDVGIWMH +VDK +LTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALG 426

[Close]

BLAST of Carg17977 vs. TrEMBL
Match: tr|A0A0A0M2R3|A0A0A0M2R3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613480 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 2.7e-136
Identity = 302/378 (79.89%), Postives = 326/378 (86.24%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           MA+M++IHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA N N+FSWN+AI
Sbjct: 67  MAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAI 126

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY+ESENP NAV LYR MLRKG +IPDNY+YPLLFK CAG SLS+TANEILGHV+ LGF
Sbjct: 127 RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGF 186

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
            SDLFVHNAIIHVLVSCGELLAARK+FDESCVRDLVSWNS+INGYVRCGLADEA +LYYK
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYK 246

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEM--------------------N 240
           M +L V PDEVTMIG+VSASAQLEN+ALGRKLHQ IEEM                    N
Sbjct: 247 MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKN 306

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IEAA+ LFENMTKKT+VSWTTM         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 IEAAKILFENMTKKTVVSWTTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXX     TVV+CLSACSQLGALDVGIWMH +VDK NLTMNVALG
Sbjct: 367 XXXXXXXXXXXXXXXXXXAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALG 426

[Close]

BLAST of Carg17977 vs. TrEMBL
Match: tr|A0A251PRT8|A0A251PRT8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G244500 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112
Identity = 265/378 (70.11%), Postives = 305/378 (80.69%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           M+Q++QI +QM+ TGLISDGFA SRL+AFCA+SE RNLDYC+K+L N  NPN+FSWNV I
Sbjct: 70  MSQLKQIQSQMILTGLISDGFASSRLIAFCALSESRNLDYCNKILYNTQNPNVFSWNVVI 129

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY ESENPR AV LY+KMLR GGS PDNY+YPLL K CA L+L+FT  E+LGHV+ LG 
Sbjct: 130 RGYSESENPREAVVLYKKMLRNGGSRPDNYTYPLLLKVCANLTLNFTGREVLGHVMRLGL 189

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
           YSD+FVHNA+IH+LVSC EL AARKVFDE CVRDLVSWNS+INGYVR GLA EAL +Y +
Sbjct: 190 YSDMFVHNAVIHMLVSCRELHAARKVFDEGCVRDLVSWNSLINGYVRSGLACEALRIYQE 249

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEE--------------------MN 240
           ME    KPDEVTMIG+VS+ AQLE++ LGRK H+ IEE                     N
Sbjct: 250 MELKGFKPDEVTMIGVVSSCAQLEDLRLGRKFHRLIEENGLSLTVPLANSLMDMYMKCEN 309

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +EAA+ LF+NM+KKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 310 LEAAQALFDNMSKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXXT+V CL ACSQLGALDVGIW+H +++KQ L++NVA+G
Sbjct: 370 XXXXXXXXXXXXXXXXXXXXXXXTMVGCLCACSQLGALDVGIWIHHYIEKQGLSINVAVG 429

[Close]

BLAST of Carg17977 vs. TrEMBL
Match: tr|A0A251PQE2|A0A251PQE2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G244500 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112
Identity = 265/378 (70.11%), Postives = 305/378 (80.69%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           M+Q++QI +QM+ TGLISDGFA SRL+AFCA+SE RNLDYC+K+L N  NPN+FSWNV I
Sbjct: 70  MSQLKQIQSQMILTGLISDGFASSRLIAFCALSESRNLDYCNKILYNTQNPNVFSWNVVI 129

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY ESENPR AV LY+KMLR GGS PDNY+YPLL K CA L+L+FT  E+LGHV+ LG 
Sbjct: 130 RGYSESENPREAVVLYKKMLRNGGSRPDNYTYPLLLKVCANLTLNFTGREVLGHVMRLGL 189

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
           YSD+FVHNA+IH+LVSC EL AARKVFDE CVRDLVSWNS+INGYVR GLA EAL +Y +
Sbjct: 190 YSDMFVHNAVIHMLVSCRELHAARKVFDEGCVRDLVSWNSLINGYVRSGLACEALRIYQE 249

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEE--------------------MN 240
           ME    KPDEVTMIG+VS+ AQLE++ LGRK H+ IEE                     N
Sbjct: 250 MELKGFKPDEVTMIGVVSSCAQLEDLRLGRKFHRLIEENGLSLTVPLANSLMDMYMKCEN 309

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +EAA+ LF+NM+KKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 310 LEAAQALFDNMSKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXXT+V CL ACSQLGALDVGIW+H +++KQ L++NVA+G
Sbjct: 370 XXXXXXXXXXXXXXXXXXXXXXXTMVGCLCACSQLGALDVGIWIHHYIEKQGLSINVAVG 429

[Close]

BLAST of Carg17977 vs. TrEMBL
Match: tr|M5WP42|M5WP42_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa026204mg PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112
Identity = 265/378 (70.11%), Postives = 305/378 (80.69%), Query Frame = 0


Query: 1   MAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIFSWNVAI 60
           M+Q++QI +QM+ TGLISDGFA SRL+AFCA+SE RNLDYC+K+L N  NPN+FSWNV I
Sbjct: 61  MSQLKQIQSQMILTGLISDGFASSRLIAFCALSESRNLDYCNKILYNTQNPNVFSWNVVI 120

Query: 61  RGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGHVVHLGF 120
           RGY ESENPR AV LY+KMLR GGS PDNY+YPLL K CA L+L+FT  E+LGHV+ LG 
Sbjct: 121 RGYSESENPREAVVLYKKMLRNGGSRPDNYTYPLLLKVCANLTLNFTGREVLGHVMRLGL 180

Query: 121 YSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEALNLYYK 180
           YSD+FVHNA+IH+LVSC EL AARKVFDE CVRDLVSWNS+INGYVR GLA EAL +Y +
Sbjct: 181 YSDMFVHNAVIHMLVSCRELHAARKVFDEGCVRDLVSWNSLINGYVRSGLACEALRIYQE 240

Query: 181 MEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEE--------------------MN 240
           ME    KPDEVTMIG+VS+ AQLE++ LGRK H+ IEE                     N
Sbjct: 241 MELKGFKPDEVTMIGVVSSCAQLEDLRLGRKFHRLIEENGLSLTVPLANSLMDMYMKCEN 300

Query: 241 IEAAETLFENMTKKTIVSWTTMVVGYAKCGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +EAA+ LF+NM+KKTIVSWT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 LEAAQALFDNMSKKTIVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXTVVSCLSACSQLGALDVGIWMHRFVDKQNLTMNVALG 359
           XXXXXXXXXXXXXXXXXXXXXXXT+V CL ACSQLGALDVGIW+H +++KQ L++NVA+G
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXTMVGCLCACSQLGALDVGIWIHHYIEKQGLSINVAVG 420

The following BLAST results are available for this feature:

BLAST of Carg17977 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927674.1	2.3e-155	91.27	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita ...	[more]
XP_023531862.1	3.1e-152	89.95	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita ...	[more]
XP_022966942.1	2.6e-151	89.42	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita ...	[more]
XP_008450440.1	9.7e-138	81.48	PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial ...	[more]
XP_022154126.1	2.2e-137	82.01	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Momordica ...	[more]

BLAST of Carg17977 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22410.1	1.1e-79	54.35	SLOW GROWTH 1	[more]
AT1G15510.1	3.2e-42	32.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G38010.1	1.1e-39	28.00	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G05240.1	1.9e-39	26.65	mitochondrial editing factor 19	[more]
AT4G21065.1	1.9e-39	33.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg17977 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJZ3\|PP169_ARATH	2.0e-78	54.35	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
sp\|Q9M9E2\|PPR45_ARATH	5.7e-41	32.21	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop...	[more]
sp\|Q9SZK1\|PP355_ARATH	2.0e-38	28.00	Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9MA95\|PP214_ARATH	3.5e-38	26.65	Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th...	[more]
sp\|A8MQA3\|PP330_ARATH	3.5e-38	33.70	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg17977 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP74\|A0A1S3BP74_CUCME	6.4e-138	81.48	pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis ...	[more]
tr\|A0A0A0M2R3\|A0A0A0M2R3_CUCSA	2.7e-136	79.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613480 PE=4 SV=1	[more]
tr\|A0A251PRT8\|A0A251PRT8_PRUPE	3.5e-112	70.11	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G244500 PE=4 SV=1	[more]
tr\|A0A251PQE2\|A0A251PQE2_PRUPE	3.5e-112	70.11	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G244500 PE=4 SV=1	[more]
tr\|M5WP42\|M5WP42_PRUPE	3.5e-112	70.11	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa026204mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17977-RA	Carg17977-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 126..149 e-value: 0.79 score: 10.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 156..190 e-value: 7.9E-9 score: 33.2 coord: 237..269 e-value: 3.3E-8 score: 31.2 coord: 270..302 e-value: 7.8E-8 score: 30.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 265..312 e-value: 2.0E-12 score: 47.0 coord: 51..100 e-value: 2.4E-8 score: 33.9 coord: 154..198 e-value: 6.4E-10 score: 39.0
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 235..262 e-value: 3.6E-6 score: 26.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 52..86 score: 9.405
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 301..335 score: 5.853
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 235..269 score: 12.452
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 270..300 score: 8.813
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 154..188 score: 13.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 88..122 score: 5.009
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..223 score: 5.667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 123..153 score: 6.566
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 220..331 e-value: 6.6E-28 score: 99.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..105 e-value: 3.3E-10 score: 42.0 coord: 106..219 e-value: 6.1E-22 score: 80.5
None	No IPR available	PANTHER	PTHR24015:SF666	SUBFAMILY NOT NAMED	coord: 9..359
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 9..359

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17977	Cla006291	Watermelon (97103) v1	carwmB0163
Carg17977	Csa1G613480	Cucumber (Chinese Long) v2	carcuB0192
Carg17977	MELO3C015205	Melon (DHL92) v3.5.1	carmeB0178
Carg17977	ClCG03G013360	Watermelon (Charleston Gray)	carwcgB0165
Carg17977	CSPI01G30260	Wild cucumber (PI 183967)	carcpiB0199
Carg17977	Cucsa.143290	Cucumber (Gy14) v1	carcgyB0212
Carg17977	CmaCh11G008390	Cucurbita maxima (Rimu)	carcmaB0231
Carg17977	CmoCh11G008500	Cucurbita moschata (Rifu)	carcmoB0241
Carg17977	Lsi06G005160	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg17977	Cp4.1LG04g12010	Cucurbita pepo (Zucchini)	carcpeB0248
Carg17977	CsGy1G029610	Cucumber (Gy14) v2	carcgybB0186
Carg17977	MELO3C015205.2	Melon (DHL92) v3.6.1	carmedB0182
Carg17977	CsaV3_1G042690	Cucumber (Chinese Long) v3	carcucB0199
Carg17977	Cla97C03G063570	Watermelon (97103) v2	carwmbB0178
Carg17977	Bhi02G001344	Wax gourd	carwgoB0223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17977	Wax gourd	carwgoB0221
Carg17977	Silver-seed gourd	carcarB207
Carg17977	Silver-seed gourd	carcarB208
Carg17977	Silver-seed gourd	carcarB209
Carg17977	Silver-seed gourd	carcarB210
Carg17977	Cucurbita maxima (Rimu)	carcmaB0230
Carg17977	Cucurbita maxima (Rimu)	carcmaB0232
Carg17977	Cucurbita maxima (Rimu)	carcmaB0233
Carg17977	Cucurbita moschata (Rifu)	carcmoB0240
Carg17977	Cucurbita moschata (Rifu)	carcmoB0242
Carg17977	Cucurbita pepo (Zucchini)	carcpeB0246
Carg17977	Cucurbita pepo (Zucchini)	carcpeB0247
Carg17977	Cucurbita pepo (Zucchini)	carcpeB0249