Carg17938 (gene) Silver-seed gourd

Overview
NameCarg17938
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSNAP25 like protein SNAP33
LocationCucurbita_argyrosperma_scaffold_114 : 338276 .. 339346 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTTTGTCTATTTACAGAAAAAGCACTTCAATTGGAAGCACTTTCCTCTAAGCATATTTGAAAATATTTAACAAGAGATTTGTTGTAAACCAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGGTGCGTTGTTATGTTCTTAGAGAAAAGCTTCTTGTTTTTCATTTTCCATAAACATTTCTAAAATTGTTTACGGGTTAACGAATACAATTATATCTTCCGTTATTAAAAAAAGAATGAAATGAGAAACAAGAACCGAGAATGTTACTAAACGGGTTGAAATGCTAATTTTTCTTCCTCTGGAATCTAAACCCGTGTGATGTGGTAAAGGGAGGATATTTGACGACCAAAAGCCTTTGTAGCACTAGTGTTATACAAAAGTCATGGGTGAAAATTGGTCTGATGGTTCGGAAGAAACCTATTCCCGTTCTCTGTTCCAAACATTCCTAAAAGTAGATGACAAGTTTTAAATCTCATCTTTGTTAAATGGTTTTTGAATCTATGTTACTATATTCCAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAGATTTGAAATTTGCAAGGTCTCATCTGGTTTGGCATCAGCAAATATGATGGTATATGCTTTGACTGACCGGCTTTAGCTTCTTCCCTTTTGGTTCTCAGTGTCTTCCTCTCTGTCTGTATGTCTTGTCTTCATCCGAAAAGAAACGTAAAATTTCCACTCTTCTGCTAAAAACAGTTGTGAAATGGTTTGGTTATTGCAAGCCCAATCTGGTTGATGATGTAATTTGCTCATATCTCTATTTACAACTTTTATATTTA

mRNA sequence

GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAGATTTGAAATTTGCAAGGTCTCATCTGGTTTGGCATCAGCAAATATGATGGTATATGCTTTGACTGACCGGCTTTAGCTTCTTCCCTTTTGGTTCTCAGTGTCTTCCTCTCTGTCTGTATGTCTTGTCTTCATCCGAAAAGAAACGTAAAATTTCCACTCTTCTGCTAAAAACAGTTGTGAAATGGTTTGGTTATTGCAAGCCCAATCTGGTTGATGATGTAATTTGCTCATATCTCTATTTACAACTTTTATATTTA

Coding sequence (CDS)

GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAG

Protein sequence

DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK
Homology
[Close]
BLAST of Carg17938 vs. NCBI nr
Match: XP_022921394.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921396.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921397.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 3.6e-50
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           DQAVISKGNHLEQRERLGLSRAP PRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL
Sbjct: 198 DQAVISKGNHLEQRERLGLSRAPNPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 257

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK
Sbjct: 258 GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 305

[Close]
BLAST of Carg17938 vs. NCBI nr
Match: XP_023516514.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516515.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516516.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 3.6e-50
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           DQAVISKGNHLEQRERLGLSRAP PRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL
Sbjct: 198 DQAVISKGNHLEQRERLGLSRAPNPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 257

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK
Sbjct: 258 GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 305

[Close]
BLAST of Carg17938 vs. NCBI nr
Match: XP_022987568.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita maxima] >XP_022987569.1 putative SNAP25 homologous protein SNAP30 [Cucurbita maxima] >XP_022987570.1 putative SNAP25 homologous protein SNAP30 [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-49
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           DQAVISKGNHLEQRERLGLSRAP PRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL
Sbjct: 198 DQAVISKGNHLEQRERLGLSRAPNPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 257

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELKGMAVDMGTELDRQNKALD+LFDDADEITVRVDNANRRARHLLRK
Sbjct: 258 GELKGMAVDMGTELDRQNKALDHLFDDADEITVRVDNANRRARHLLRK 305

[Close]
BLAST of Carg17938 vs. NCBI nr
Match: XP_008453247.1 (PREDICTED: putative SNAP25 homologous protein SNAP30 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 4.0e-41
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           D AVISKGNHLEQRE+LGLSRAP PRS      EPTNSLQKVEVEKVKQEDALSDLSNIL
Sbjct: 200 DHAVISKGNHLEQREKLGLSRAPNPRSXXXXXXEPTNSLQKVEVEKVKQEDALSDLSNIL 259

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELK MAVDMG+ELD+QN+ALDNLFDDA+E+T+RVDNAN+RARHLLRK
Sbjct: 260 GELKEMAVDMGSELDKQNRALDNLFDDANEVTIRVDNANQRARHLLRK 307

[Close]
BLAST of Carg17938 vs. NCBI nr
Match: XP_004138184.1 (PREDICTED: SNAP25 homologous protein SNAP33-like [Cucumis sativus] >KGN63709.1 hypothetical protein Csa_1G012100 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40
Identity = 90/108 (83.33%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           D AVISKGNHLEQRE+LGLSRAP PRS      EPTNSLQKVEVEKVKQ+DALSDLSNIL
Sbjct: 201 DHAVISKGNHLEQREKLGLSRAPNPRSXXXXXXEPTNSLQKVEVEKVKQDDALSDLSNIL 260

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELK MAVDMG+ELD+QNKALD+LFDDA+E+T+RVDNAN+RARHLLRK
Sbjct: 261 GELKEMAVDMGSELDKQNKALDHLFDDANEVTIRVDNANQRARHLLRK 308

[Close]
BLAST of Carg17938 vs. TAIR10
Match: AT5G61210.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 33)

HSP 1 Score: 117.9 bits (294), Expect = 4.0e-27
Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRS-SRAPHPEPTNSLQKVEVEKVKQEDALSDLSNI 60
           D +   + NHLE+RE+LGL+ AP+ +S +R P PE  ++ Q+VE+EK KQ+D LSDLS+I
Sbjct: 192 DDSPTRRVNHLEKREKLGLNSAPRGQSRTREPLPESADAYQRVEMEKAKQDDGLSDLSDI 251

Query: 61  LGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           LGELK MAVDMG+E+++QNK LD+L DD DE+  RV  +N+R R LL K
Sbjct: 252 LGELKNMAVDMGSEIEKQNKGLDHLHDDVDELNFRVQQSNQRGRRLLGK 300

[Close]
BLAST of Carg17938 vs. TAIR10
Match: AT5G07880.1 (synaptosomal-associated protein SNAP25-like 29)

HSP 1 Score: 92.4 bits (228), Expect = 1.8e-19
Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0 

Query: 4   VISKGN-------HLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDL 63
           VI+KG+        L+ RE+LGL+ + KP+S     PE  ++ QK ++   KQ++AL+DL
Sbjct: 144 VITKGDSPKRKVIDLKTREKLGLNPSLKPKSKTL--PEAVDAYQKTQI--AKQDEALTDL 203

Query: 64  SNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           S +LGELK MAVDMGT ++RQ   LD+L D+ADE+  RV  +N+RAR+LLRK
Sbjct: 204 SALLGELKNMAVDMGTAIERQTNELDHLQDNADELNYRVKQSNQRARYLLRK 251

[Close]
BLAST of Carg17938 vs. TAIR10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30)

HSP 1 Score: 50.4 bits (119), Expect = 7.8e-07
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 9   NHLEQRERLGLSRAPKPRSSRAPH-PEPTNSLQKVEVEKVKQEDALSDLS 58
           NH E+RE+LGL    K RSS  P   +PTN+LQKVE EK KQ+D LSDLS
Sbjct: 165 NHKEEREKLGL--GAKGRSSSQPALDQPTNALQKVEQEKAKQDDGLSDLS 212

[Close]
BLAST of Carg17938 vs. TAIR10
Match: AT3G09740.1 (syntaxin of plants 71)

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-05
Identity = 27/70 (38.57%), Postives = 36/70 (51.43%), Query Frame = 0 

Query: 34  EPTNSLQKVEVEKVKQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITV 93
           E +   Q+ E+ K+KQE  L  +S  L  LK MA DM  ELDRQ   +D +    D  T 
Sbjct: 163 ESSQFRQEYEMRKIKQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATS 222

Query: 94  RVDNANRRAR 104
            + N N R +
Sbjct: 223 DLKNTNVRLK 232

[Close]
BLAST of Carg17938 vs. Swiss-Prot
Match: sp|Q9S7P9|SNP33_ARATH (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana OX=3702 GN=SNAP33 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.2e-26
Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRS-SRAPHPEPTNSLQKVEVEKVKQEDALSDLSNI 60
           D +   + NHLE+RE+LGL+ AP+ +S +R P PE  ++ Q+VE+EK KQ+D LSDLS+I
Sbjct: 192 DDSPTRRVNHLEKREKLGLNSAPRGQSRTREPLPESADAYQRVEMEKAKQDDGLSDLSDI 251

Query: 61  LGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           LGELK MAVDMG+E+++QNK LD+L DD DE+  RV  +N+R R LL K
Sbjct: 252 LGELKNMAVDMGSEIEKQNKGLDHLHDDVDELNFRVQQSNQRGRRLLGK 300

[Close]
BLAST of Carg17938 vs. Swiss-Prot
Match: sp|Q9SD96|SNP29_ARATH (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana OX=3702 GN=SNAP29 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.2e-18
Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0 

Query: 4   VISKGN-------HLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDL 63
           VI+KG+        L+ RE+LGL+ + KP+S     PE  ++ QK ++   KQ++AL+DL
Sbjct: 144 VITKGDSPKRKVIDLKTREKLGLNPSLKPKSKTL--PEAVDAYQKTQI--AKQDEALTDL 203

Query: 64  SNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           S +LGELK MAVDMGT ++RQ   LD+L D+ADE+  RV  +N+RAR+LLRK
Sbjct: 204 SALLGELKNMAVDMGTAIERQTNELDHLQDNADELNYRVKQSNQRARYLLRK 251

[Close]
BLAST of Carg17938 vs. Swiss-Prot
Match: sp|Q17QQ3|SNP25_BOVIN (Synaptosomal-associated protein 25 OS=Bos taurus OX=9913 GN=SNAP25 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 48  KQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLL 107
           + ++ L  +S I+G L+ MA+DMG E+D QN+ +D + + AD    R+D AN+RA  +L
Sbjct: 145 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203

[Close]
BLAST of Carg17938 vs. Swiss-Prot
Match: sp|P60878|SNP25_CHICK (Synaptosomal-associated protein 25 OS=Gallus gallus OX=9031 GN=SNAP25 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 48  KQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLL 107
           + ++ L  +S I+G L+ MA+DMG E+D QN+ +D + + AD    R+D AN+RA  +L
Sbjct: 145 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203

[Close]
BLAST of Carg17938 vs. Swiss-Prot
Match: sp|P60880|SNP25_HUMAN (Synaptosomal-associated protein 25 OS=Homo sapiens OX=9606 GN=SNAP25 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 48  KQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLL 107
           + ++ L  +S I+G L+ MA+DMG E+D QN+ +D + + AD    R+D AN+RA  +L
Sbjct: 145 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203

[Close]
BLAST of Carg17938 vs. TrEMBL
Match: tr|A0A1S3BVT2|A0A1S3BVT2_CUCME (putative SNAP25 homologous protein SNAP30 OS=Cucumis melo OX=3656 GN=LOC103494024 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-41
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           D AVISKGNHLEQRE+LGLSRAP PRS      EPTNSLQKVEVEKVKQEDALSDLSNIL
Sbjct: 200 DHAVISKGNHLEQREKLGLSRAPNPRSXXXXXXEPTNSLQKVEVEKVKQEDALSDLSNIL 259

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELK MAVDMG+ELD+QN+ALDNLFDDA+E+T+RVDNAN+RARHLLRK
Sbjct: 260 GELKEMAVDMGSELDKQNRALDNLFDDANEVTIRVDNANQRARHLLRK 307

[Close]
BLAST of Carg17938 vs. TrEMBL
Match: tr|A0A0A0LRS5|A0A0A0LRS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012100 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-40
Identity = 90/108 (83.33%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNIL 60
           D AVISKGNHLEQRE+LGLSRAP PRS      EPTNSLQKVEVEKVKQ+DALSDLSNIL
Sbjct: 201 DHAVISKGNHLEQREKLGLSRAPNPRSXXXXXXEPTNSLQKVEVEKVKQDDALSDLSNIL 260

Query: 61  GELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           GELK MAVDMG+ELD+QNKALD+LFDDA+E+T+RVDNAN+RARHLLRK
Sbjct: 261 GELKEMAVDMGSELDKQNKALDHLFDDANEVTIRVDNANQRARHLLRK 308

[Close]
BLAST of Carg17938 vs. TrEMBL
Match: tr|A0A1S3XFE7|A0A1S3XFE7_TOBAC (SNAP25 homologous protein SNAP33 OS=Nicotiana tabacum OX=4097 GN=LOC107764518 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.5e-31
Identity = 76/109 (69.72%), Postives = 88/109 (80.73%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPR-SSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNI 60
           D  V  KGNHLEQRE+LGLS APK R SSR P PEPTN+LQ++EVEK KQ+DALSDLSN+
Sbjct: 197 DDPVQRKGNHLEQREKLGLSSAPKGRSSSRTPPPEPTNALQQIEVEKAKQDDALSDLSNL 256

Query: 61  LGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           LGELK MA+DMG+E+ RQNKALD+L DD DE+  RV  AN+R R LL K
Sbjct: 257 LGELKDMALDMGSEIGRQNKALDHLQDDVDELNFRVKGANQRGRRLLGK 305

[Close]
BLAST of Carg17938 vs. TrEMBL
Match: tr|A0A1U7VH52|A0A1U7VH52_NICSY (SNAP25 homologous protein SNAP33 OS=Nicotiana sylvestris OX=4096 GN=LOC104213372 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.4e-31
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPR-SSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNI 60
           D  V  KGNHLEQRE+LGLS APK R SSR P PEPTN+LQ +EVEK KQ+DALSDLSN+
Sbjct: 197 DDPVQRKGNHLEQREKLGLSSAPKGRSSSRTPPPEPTNALQHIEVEKAKQDDALSDLSNL 256

Query: 61  LGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           LGELK MA+DMG+E+ RQNKALD+L DD DE+  RV  AN+R R LL K
Sbjct: 257 LGELKDMALDMGSEIGRQNKALDHLQDDVDELNFRVKGANQRGRRLLGK 305

[Close]
BLAST of Carg17938 vs. TrEMBL
Match: tr|A0A1J6JSU5|A0A1J6JSU5_NICAT (Snap25 likeous protein snap33 OS=Nicotiana attenuata OX=49451 GN=SNAP33_0 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-30
Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0 

Query: 1   DQAVISKGNHLEQRERLGLSRAPKPR-SSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNI 60
           D  V  KGNHLEQRE+LGLS  PK R SSR P PEPTN+LQ++EVEK KQ+DALSDLSN+
Sbjct: 197 DDPVQRKGNHLEQREKLGLSSGPKGRASSRIPPPEPTNALQQIEVEKAKQDDALSDLSNL 256

Query: 61  LGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK 109
           LGELK MA+DMG+E+ RQNKALD+L DD DE+  RV  AN+R R LL K
Sbjct: 257 LGELKDMALDMGSEIGRQNKALDHLQDDVDELNFRVKGANQRGRRLLGK 305

The following BLAST results are available for this feature:
BLAST of Carg17938 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921394.13.6e-5099.07putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921396.1 p... [more]
XP_023516514.13.6e-5099.07putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_02351... [more]
XP_022987568.11.4e-4998.15putative SNAP25 homologous protein SNAP30 [Cucurbita maxima] >XP_022987569.1 put... [more]
XP_008453247.14.0e-4184.26PREDICTED: putative SNAP25 homologous protein SNAP30 [Cucumis melo][more]
XP_004138184.11.5e-4083.33PREDICTED: SNAP25 homologous protein SNAP33-like [Cucumis sativus] >KGN63709.1 h... [more]
BLAST of Carg17938 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G61210.14.0e-2755.96soluble N-ethylmaleimide-sensitive factor adaptor protein 33[more]
AT5G07880.11.8e-1949.11synaptosomal-associated protein SNAP25-like 29[more]
AT1G13890.17.8e-0762.00soluble N-ethylmaleimide-sensitive factor adaptor protein 30[more]
AT3G09740.13.3e-0538.57syntaxin of plants 71[more]
BLAST of Carg17938 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S7P9|SNP33_ARATH7.2e-2655.96SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana OX=3702 GN=SNAP33 PE=1 ... [more]
sp|Q9SD96|SNP29_ARATH3.2e-1849.11SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana OX=3702 GN=SNAP29 PE=2 ... [more]
sp|Q17QQ3|SNP25_BOVIN5.7e-0740.68Synaptosomal-associated protein 25 OS=Bos taurus OX=9913 GN=SNAP25 PE=1 SV=1[more]
sp|P60878|SNP25_CHICK5.7e-0740.68Synaptosomal-associated protein 25 OS=Gallus gallus OX=9031 GN=SNAP25 PE=1 SV=1[more]
sp|P60880|SNP25_HUMAN5.7e-0740.68Synaptosomal-associated protein 25 OS=Homo sapiens OX=9606 GN=SNAP25 PE=1 SV=1[more]
BLAST of Carg17938 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BVT2|A0A1S3BVT2_CUCME2.6e-4184.26putative SNAP25 homologous protein SNAP30 OS=Cucumis melo OX=3656 GN=LOC10349402... [more]
tr|A0A0A0LRS5|A0A0A0LRS5_CUCSA1.0e-4083.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012100 PE=4 SV=1[more]
tr|A0A1S3XFE7|A0A1S3XFE7_TOBAC5.5e-3169.72SNAP25 homologous protein SNAP33 OS=Nicotiana tabacum OX=4097 GN=LOC107764518 PE... [more]
tr|A0A1U7VH52|A0A1U7VH52_NICSY9.4e-3169.72SNAP25 homologous protein SNAP33 OS=Nicotiana sylvestris OX=4096 GN=LOC104213372... [more]
tr|A0A1J6JSU5|A0A1J6JSU5_NICAT2.1e-3068.81Snap25 likeous protein snap33 OS=Nicotiana attenuata OX=49451 GN=SNAP33_0 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17938-RACarg17938-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..108
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 40..106
e-value: 3.1E-21
score: 77.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 7..108
NoneNo IPR availablePANTHERPTHR19305:SF7SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATEDcoord: 7..108
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 48..104
e-value: 7.10059E-12
score: 55.2572
NoneNo IPR availableSUPERFAMILYSSF58038SNARE fusion complexcoord: 43..106
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 38..105
e-value: 8.6E-11
score: 51.9
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 48..105
score: 14.997

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17938Cla019077Watermelon (97103) v1carwmB0460
Carg17938Csa1G012100Cucumber (Chinese Long) v2carcuB0493
Carg17938MELO3C017208Melon (DHL92) v3.5.1carmeB0468
Carg17938ClCG06G015830Watermelon (Charleston Gray)carwcgB0450
Carg17938CSPI01G02690Wild cucumber (PI 183967)carcpiB0499
Carg17938Cucsa.198070Cucumber (Gy14) v1carcgyB0533
Carg17938CmaCh11G001900Cucurbita maxima (Rimu)carcmaB0643
Carg17938CmaCh10G002210Cucurbita maxima (Rimu)carcmaB0640
Carg17938CmoCh11G001980Cucurbita moschata (Rifu)carcmoB0624
Carg17938CmoCh10G002320Cucurbita moschata (Rifu)carcmoB0622
Carg17938Lsi06G014310Bottle gourd (USVL1VR-Ls)carlsiB419
Carg17938Cp4.1LG18g07630Cucurbita pepo (Zucchini)carcpeB0646
Carg17938Cp4.1LG04g14730Cucurbita pepo (Zucchini)carcpeB0649
Carg17938CsGy1G002720Cucumber (Gy14) v2carcgybB0470
Carg17938MELO3C017208.2Melon (DHL92) v3.6.1carmedB0471
Carg17938CsaV3_1G002730Cucumber (Chinese Long) v3carcucB0496
Carg17938Cla97C04G078860Watermelon (97103) v2carwmbB0483
Carg17938Cla97C06G125400Watermelon (97103) v2carwmbB0486
Carg17938Bhi08G000938Wax gourdcarwgoB0559
Carg17938Bhi02G000180Wax gourdcarwgoB0562
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17938Silver-seed gourdcarcarB060
Carg17938Cucumber (Gy14) v1carcgyB0531
Carg17938Cucurbita maxima (Rimu)carcmaB0646
Carg17938Cucurbita moschata (Rifu)carcmoB0628
Carg17938Cucurbita pepo (Zucchini)carcpeB0648
Carg17938Wild cucumber (PI 183967)carcpiB0501
Carg17938Cucumber (Chinese Long) v2carcuB0495
Carg17938Cucumber (Chinese Long) v3carcucB0498
Carg17938Bottle gourd (USVL1VR-Ls)carlsiB418
Carg17938Melon (DHL92) v3.5.1carmeB0466
Carg17938Melon (DHL92) v3.6.1carmedB0469
Carg17938Watermelon (Charleston Gray)carwcgB0448
Carg17938Watermelon (97103) v1carwmB0458