Carg17937 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17937
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger protein 346
Location	Cucurbita_argyrosperma_scaffold_114 : 332988 .. 336275 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGTGAGTGTTCTTTTTTTCTTTTTCCTTATTTATCTGTTTCAATATTCTACGTGTCAATTTCCTTGTGTTTGGTGGTCTATCTTCCATTTAGTTTGGATTGTTTCAGGGTTTGTGGAGGCTGAGGTCCTTTTGTCTCTGTTATTTGATTCTTGTGTTCTTAGTGGGAAATTTGCGCGCACAAGACTGCGAATTGTTCTGCCGTATGAACTGGGTTCCCCCATCCCCACGCCATGGATTCCTTTTAAAATAAGCTTTGTTAGTAAGAAAGTGTGTGATATTAAATCATTTTGATGTTTCATTTTACATACTAAGTGGATGCTTTTGATATCTTTTTTTTTTTCGAATTACTTTTGAAAATTTAGTGTGAAAAGTGCTTTTTTTCGTGTTGATAAAAGTGATTTTGGCCATACCAAATCAATGTCTTTTCAAGCCTAGTCTATGTGATGATGTATCTTATTTATGCATATCATCTAAAATCTATTGCTTGAAAATTTTCTTAAGTTCTTTTGGGTCAGAGTCAAAAACTAAATTGAGCTTGGTCATGACTTAGACATCTGTCCTATGGTAATATGTTCAATTTTTCCATCCCCACGTTGTTTGAATTCAAAAAATTATTCTTAAACATAACATAAGTGATGATGGATCTTATTTTTGCGTCTACTATAAGCTCAATTGCATGAATGGAGATAACTTTTTTCTCACAACAAATTTTATGTGAGTGATGGCTTTATATTACAATCATCCTATGCATCAAGACAGTCAGAAGTTCATGTCGATGCTTTTTTTTAAAAAAAAAATCGTCTTTTTGTGTAGGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGTGAGTTACACTGGTGTTTTCGGCTAGTATAAACTGTGGTACTCTGGTCATCATTTGCTTTTTCTTAGAGTTTTTTTCTTTCAATACTTGTTTACTTTTATTTATCCCTTGAATATAAATACGAATGCATTATCTAGTGGTAAAAAAAGCATGAAATAGAAGTCATTGTCCATTTCCATGGGGTTATTGGAAGGTTTGCTTTGTTTCTTTTGTGATCCTTATTTTTTAGACAAAATACAGTATTCTTCAATCAAACGACTTTCTATCTATCCAGGGTTATTTCTTCAGATCTATAATATTGTCTTCTACTAGGTAATTATTGATAGGATACCCGTTAGTATATCAAAACAAAGGATTCAGAGAAGTATTTGGAAAAGCAAGGGGCAATGGGTATCGTTGAAAGTTTTTTGCCATATGTAAAAATAGATCCATATGTTGAATGGTACAAGGTGGTTGGGTTGTTTAATTTTAGTTTTTGTTCTTATTTCAATCTATTTAGGTCTTTCTGGCTATTATTCACCACCTTGGCATATGTATAGGACACTTCTGTTGCATCCCTTTCATCATTGTAGATGAAAGGTGTCTTCAATTAGGGGGTCTTAGTTGTGAAACATCGTTCCTCTGTGCATCGAGTCAGCTTAGTGATGATGGGTGCTTCCTCGAGTGATCAAGACTACGTAGTTGTTTGGTGCATGGTACTCTACTGATCACAAATCTAATATGCTATACAATCAGAAGCTGCTGCTATTCTTCTAGTCATTGTCAAGTGAAAACCATGAGCTTTGGTGGGATTTTGGCTACTAAGTTAGAGCTGTTGCTTTCTGGTCATATATCTCTTTATTAAAACTTCAACTTTCCTGCTGAATAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAGTCTCATCGGAAAAATCCATTCCGTTCTCGCACCAAATCACTGTGTATTTGTTTTCTGATGTTCCCATATCTTCTTCTGTGTGCTGTGTATTCTTGTACTCCGAGTTGTGGAGCTAAATCGTCGGTGGGGGGCGGAGGGATATCATAGATTTCTAATTACAGACAGTGATTTTGCAGTTGTAAACTAAATCATAGATCATGCTACTTGGAAATTATGACCAAGTCTCTAATTCCTTAAGAAATCATATT

mRNA sequence

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAGTCTCATCGGAAAAATCCATTCCGTTCTCGCACCAAATCACTGTGTATTTGTTTTCTGATGTTCCCATATCTTCTTCTGTGTGCTGTGTATTCTTGTACTCCGAGTTGTGGAGCTAAATCGTCGGTGGGGGGCGGAGGGATATCATAGATTTCTAATTACAGACAGTGATTTTGCAGTTGTAAACTAAATCATAGATCATGCTACTTGGAAATTATGACCAAGTCTCTAATTCCTTAAGAAATCATATT

Coding sequence (CDS)

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAG

Protein sequence

MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN

Homology

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_022922000.1 (zinc finger protein 346-like [Cucurbita moschata])

HSP 1 Score: 834.3 bits (2154), Expect = 1.9e-238
Identity = 424/425 (99.76%), Postives = 424/425 (99.76%), Query Frame = 0


Query: 28  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 87
           QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD
Sbjct: 27  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 86

Query: 88  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 147
           PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF
Sbjct: 87  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 146

Query: 148 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 207
           TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG
Sbjct: 147 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 206

Query: 208 QVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 267
           QVAEGA DVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA
Sbjct: 207 QVAEGAPDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 266

Query: 268 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 327
           QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL
Sbjct: 267 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 326

Query: 328 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 387
           KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET
Sbjct: 327 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 386

Query: 388 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 447
           KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV
Sbjct: 387 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 446

Query: 448 TALPN 453
           TALPN
Sbjct: 447 TALPN 451

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_023516884.1 (zinc finger protein 346-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 828.2 bits (2138), Expect = 1.4e-236
Identity = 421/425 (99.06%), Postives = 422/425 (99.29%), Query Frame = 0


Query: 28  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 87
           QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD
Sbjct: 27  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 86

Query: 88  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 147
           PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF
Sbjct: 87  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 146

Query: 148 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 207
           TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG
Sbjct: 147 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 206

Query: 208 QVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 267
           QVA+GA DVPAAIKG NTKKRKLTDS TKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA
Sbjct: 207 QVAQGAPDVPAAIKGLNTKKRKLTDSSTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 266

Query: 268 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 327
           QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL
Sbjct: 267 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 326

Query: 328 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 387
           KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET
Sbjct: 327 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 386

Query: 388 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 447
           KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV
Sbjct: 387 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 446

Query: 448 TALPN 453
           TALPN
Sbjct: 447 TALPN 451

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_022988251.1 (zinc finger protein 346-like [Cucurbita maxima])

HSP 1 Score: 809.3 bits (2089), Expect = 6.6e-231
Identity = 413/425 (97.18%), Postives = 416/425 (97.88%), Query Frame = 0


Query: 28  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 87
           QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD
Sbjct: 29  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 88

Query: 88  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 147
           PTVASHNWVVPQSDPAGFA ISLLENQIASTSSNS+LEGNWATQSLAHNATRTKHVKSKF
Sbjct: 89  PTVASHNWVVPQSDPAGFALISLLENQIASTSSNSLLEGNWATQSLAHNATRTKHVKSKF 148

Query: 148 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 207
           TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG
Sbjct: 149 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 208

Query: 208 QVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 267
           QVA+GA DVPAAIKG NTKKRKLTDS TKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA
Sbjct: 209 QVAQGAPDVPAAIKGLNTKKRKLTDSSTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 268

Query: 268 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 327
           QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKV+QFAWCEVCKISCNSNEIYAKHLSGKKHL
Sbjct: 269 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVIQFAWCEVCKISCNSNEIYAKHLSGKKHL 328

Query: 328 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 387
           KN EKAEKG SDAGASNALQSATEPIIGPTENPSTN PSSDDIQKTQKSSAAQTPEDLET
Sbjct: 329 KNKEKAEKGCSDAGASNALQSATEPIIGPTENPSTNIPSSDDIQKTQKSSAAQTPEDLET 388

Query: 388 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 447
           KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQ VSGMSMLVPPLV
Sbjct: 389 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQAVSGMSMLVPPLV 448

Query: 448 TALPN 453
           TA PN
Sbjct: 449 TAFPN 453

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_004138185.2 (PREDICTED: zinc finger protein 346 [Cucumis sativus] >KGN63710.1 hypothetical protein Csa_1G012110 [Cucumis sativus])

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 333/424 (78.54%), Postives = 364/424 (85.85%), Query Frame = 0


Query: 29  PHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADP 88
           PHIVN NPSSF  FPQPVLPP V SEP LHPPGT+PYSNS +LTSTYVGLE QPQFYADP
Sbjct: 23  PHIVNANPSSFHPFPQPVLPPAVPSEPGLHPPGTDPYSNSTVLTSTYVGLEPQPQFYADP 82

Query: 89  TVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFT 148
           ++ASH WV+PQ D AGFAF SLLENQIASTSSNS+L GNW TQSLA+NATRTKHVK+KFT
Sbjct: 83  SLASHTWVLPQLDAAGFAFKSLLENQIASTSSNSLLNGNWPTQSLAYNATRTKHVKTKFT 142

Query: 149 QPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQ 208
           QPVRCEVCKI+CNSKDVFDKHVMG+KHKKNLE  NSSLT ST SD N  +LNQ G+VSGQ
Sbjct: 143 QPVRCEVCKIDCNSKDVFDKHVMGRKHKKNLEVPNSSLTSSTPSDGNTIVLNQMGNVSGQ 202

Query: 209 VAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQ 268
           VA+   DVPAA KG  +KKRKL D+  KAD  RVCTVCN+VC SQEVFDKH SGKKHAAQ
Sbjct: 203 VAQVTADVPAARKGLKSKKRKLIDTSMKADCTRVCTVCNIVCTSQEVFDKHTSGKKHAAQ 262

Query: 269 AVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLK 328
           A LTSQ PY  AI  QYDG+ KKK KKNKVVQ AWCEVCKISCNSNEIYA HLSGKKHLK
Sbjct: 263 AALTSQVPYVTAIGPQYDGNLKKKLKKNKVVQSAWCEVCKISCNSNEIYAVHLSGKKHLK 322

Query: 329 NIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLETK 388
           N+EK +KG SD   S+  Q AT P+IGP ENP+ NNPSSD IQKTQ SS  QTPE+LETK
Sbjct: 323 NVEKVKKGTSDVSTSSTPQLATVPVIGPMENPAANNPSSDGIQKTQTSS-TQTPEELETK 382

Query: 389 KRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLVT 448
           KRKIV+SG+AA+SVRTC+ICNVVCNSQTVFDSHL+GQKHA+MMKKQGVSGMSM+VPPL+T
Sbjct: 383 KRKIVKSGSAANSVRTCTICNVVCNSQTVFDSHLAGQKHATMMKKQGVSGMSMVVPPLIT 442

Query: 449 ALPN 453
           ALPN
Sbjct: 443 ALPN 445

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_022135503.1 (zinc finger protein 346-like [Momordica charantia])

HSP 1 Score: 650.6 bits (1677), Expect = 3.9e-183
Identity = 333/425 (78.35%), Postives = 366/425 (86.12%), Query Frame = 0


Query: 28  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 87
           QPHIVN  PS+F  FPQPVLPP    EP LHPPGT+PYSNSA+L STYVGLEGQPQ+YA 
Sbjct: 18  QPHIVNAIPSAFPPFPQPVLPP----EPALHPPGTDPYSNSALLPSTYVGLEGQPQYYAA 77

Query: 88  PTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKF 147
           P  ASHNWVVPQ +P G+AF SL ENQ+ STSSN++L G+WATQSL H ATR KHVK+KF
Sbjct: 78  PVAASHNWVVPQPEPLGYAFSSLHENQVPSTSSNALLSGHWATQSLEHKATRMKHVKTKF 137

Query: 148 TQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSG 207
           TQPVRCEVCKI+CNSKDVFDKHV+GKKHKKNLE QNS+LT STSSD NI MLNQ G VSG
Sbjct: 138 TQPVRCEVCKIDCNSKDVFDKHVIGKKHKKNLEVQNSALTVSTSSDSNINMLNQMGKVSG 197

Query: 208 QVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAA 267
           QV +G  DVPAA K   TKKRKL D  TK+DS+RVC VCNVVCNSQEVFDKHLSGKKHAA
Sbjct: 198 QVVQGTPDVPAASKDLETKKRKLVDCSTKSDSSRVCAVCNVVCNSQEVFDKHLSGKKHAA 257

Query: 268 QAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 327
           QA L SQNP+ AA+RS YDGS KKKPKK+KVVQ AWCEVCKISCNSNEIY KHLSGKKHL
Sbjct: 258 QAGLISQNPFVAAMRSAYDGSLKKKPKKSKVVQSAWCEVCKISCNSNEIYVKHLSGKKHL 317

Query: 328 KNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLET 387
           KN EK EKG SDA AS+A  SAT+PIIGP ENP+ NNPS+DD QKTQKSS AQTP DLET
Sbjct: 318 KNAEKVEKGKSDAAASHAPPSATDPIIGPVENPAANNPSNDDTQKTQKSS-AQTPGDLET 377

Query: 388 KKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLV 447
           KKRKIVESGTAADSV+TC+ICNVVCNS+TVF+SHL+GQ+HA+M+KKQ VSGMSM+ PPLV
Sbjct: 378 KKRKIVESGTAADSVKTCTICNVVCNSETVFNSHLAGQRHAAMVKKQAVSGMSMVGPPLV 437

Query: 448 TALPN 453
           TALPN
Sbjct: 438 TALPN 437

[Close]

BLAST of Carg17937 vs. TAIR10
Match: AT5G61190.1 (putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain)

HSP 1 Score: 102.1 bits (253), Expect = 9.5e-22
Identity = 81/254 (31.89%), Postives = 120/254 (47.24%), Query Frame = 0


Query: 180 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADS 239
           +AQ S  TGSTS        N   +   +  E    VP     +N K      SG   +S
Sbjct: 192 QAQPSQPTGSTS--------NAGDTKDHKTRE--KHVPRGSLQENRKNMLQHSSGATGES 251

Query: 240 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVV 299
           A  C +CNVVC+S E F  HLS  +H +QA +       A++       S K   +  +V
Sbjct: 252 ATTCRICNVVCDSFEKFTAHLSDIRHISQAAIVESRRAQASV-------SAKPIHQAVLV 311

Query: 300 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTEN 359
           +   C+VC+IS  +N+ Y  H  GKKH  N+E        +G S  +      ++GP E 
Sbjct: 312 EPLLCKVCQISFTNNDTYKNHTYGKKHRNNLE------LQSGKSKNI------LVGPAE- 371

Query: 360 PSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 419
                PS + ++K   +            K+ ++ES   A++   C +CNVVC SQ VF+
Sbjct: 372 -----PSKEVLEKHNMN------------KKVMIESRAQANAEFVCLMCNVVCQSQIVFN 398

Query: 420 SHLSGQKHASMMKK 434
           SHL G+KHA+M+ +
Sbjct: 432 SHLRGKKHANMLSQ 398

[Close]

BLAST of Carg17937 vs. Swiss-Prot
Match: sp|Q8AVN9|ZN346_XENLA (Zinc finger protein 346 OS=Xenopus laevis OX=8355 GN=znf346 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 82/322 (25.47%), Postives = 121/322 (37.58%), Query Frame = 0


Query: 153 CEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEG 212
           C++C    N+  + ++H  GKKHKK  E +   +T  TSS          G    Q    
Sbjct: 164 CKLCHSTFNNPLMAEQHYAGKKHKKQ-ETKTQIMTIYTSS----------GQTPAQXXXX 223

Query: 213 ALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV-- 272
                         K               C  CN+V NS E +  H+SG KH  Q +  
Sbjct: 224 XXXXXXXXXXXXXGK------------GFSCDKCNIVLNSIEQYQAHVSGAKHKNQLMSM 283

Query: 273 --LTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLK 332
             L+ +   A    S     S  K           C+ C I  NS E Y  H+SG KH  
Sbjct: 284 TPLSEEGHQAVVAPSAIASGSAGKGFS--------CDTCNIVLNSIEQYQAHISGAKHKN 343

Query: 333 NIEK----AEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSA------ 392
           +++     +E+G + A A +A  S +    G   +  T N   + I++ Q   +      
Sbjct: 344 HLKSMTPLSEEGHTAAVAPSAFASGS---AGKGFSCDTCNIVLNSIEQYQAHISGAKHKN 403

Query: 393 ---AQTPEDLETKKRKIVESGTAADSVR---TCSICNVVCNSQTVFDSHLSGQKHASM-- 452
              + TP   E     +  S  A+ S     +C  CN+V NS   + +H+SG KH +   
Sbjct: 404 HLMSMTPLSEEGHTAAVAPSAFASGSAGKGFSCDTCNIVLNSIEQYQAHVSGAKHKNQLM 451

[Close]

BLAST of Carg17937 vs. Swiss-Prot
Match: sp|Q5REX3|ZFR_PONAB (Zinc finger RNA-binding protein OS=Pongo abelii OX=9601 GN=ZFR PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-05
Identity = 27/96 (28.12%), Postives = 44/96 (45.83%), Query Frame = 0


Query: 236 KADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKK 295
           K      C VC + C   + + +HL G+KH  +          AA+++  + SS     +
Sbjct: 326 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKK---------EAALKASQNASSSNNSTR 385

Query: 296 NKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIE 332
               Q   CE+C +SC   + YA H+ G KH K ++
Sbjct: 386 GTQNQLR-CELCDVSCTGADAYAAHIRGAKHQKVVK 411

[Close]

BLAST of Carg17937 vs. Swiss-Prot
Match: sp|B0JZ85|ZN346_XENTR (Zinc finger protein 346 OS=Xenopus tropicalis OX=8364 GN=znf346 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-05
Identity = 47/189 (24.87%), Postives = 70/189 (37.04%), Query Frame = 0


Query: 153 CEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEG 212
           C +C +  +S  V + H  GK H KNL  +                        G V EG
Sbjct: 97  CPICNMTFSSPVVAESHYSGKTHIKNLRLRE----------------------QGGVTEG 156

Query: 213 ALD--VPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV 272
            L       +    T   K+ +   ++D  + C +C+   N+  + ++H +GKKH  Q  
Sbjct: 157 MLHQAKKLVVTRTPTIATKIDNRMDQSDPTKFCKLCHATFNNPLMAEQHYAGKKHKKQET 216

Query: 273 LT-------------SQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIY 327
            T             +Q P A  + S   GS       +       C+ C I  NS E Y
Sbjct: 217 KTQLMTIYTSSGHTPAQAPIAINVNSPLPGSGSAGKGFS-------CDTCNIVLNSIEQY 256

[Close]

BLAST of Carg17937 vs. Swiss-Prot
Match: sp|Q96KR1|ZFR_HUMAN (Zinc finger RNA-binding protein OS=Homo sapiens OX=9606 GN=ZFR PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.6e-05
Identity = 27/96 (28.12%), Postives = 44/96 (45.83%), Query Frame = 0


Query: 236 KADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKK 295
           K      C VC + C   + + +HL G+KH  +          AA+++  + SS     +
Sbjct: 326 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKK---------EAALKASQNTSSSNSSTR 385

Query: 296 NKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIE 332
               Q   CE+C +SC   + YA H+ G KH K ++
Sbjct: 386 GTQNQLR-CELCDVSCTGADAYAAHIRGAKHQKVVK 411

[Close]

BLAST of Carg17937 vs. Swiss-Prot
Match: sp|O88532|ZFR_MOUSE (Zinc finger RNA-binding protein OS=Mus musculus OX=10090 GN=Zfr PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-05
Identity = 26/89 (29.21%), Postives = 43/89 (48.31%), Query Frame = 0


Query: 243 CTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFA 302
           C VC + C   + + +HL G+KH  +          AA+++  + SS     +    Q  
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKK---------EAALKASQNTSSXXNSTRGTQNQLR 392

Query: 303 WCEVCKISCNSNEIYAKHLSGKKHLKNIE 332
            CE+C +SC   + YA H+ G KH K ++
Sbjct: 393 -CELCDVSCTGADAYAAHIRGAKHQKVVK 411

[Close]

BLAST of Carg17937 vs. TrEMBL
Match: tr|A0A0A0LP87|A0A0A0LP87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012110 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 9.0e-184
Identity = 333/424 (78.54%), Postives = 364/424 (85.85%), Query Frame = 0


Query: 29  PHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADP 88
           PHIVN NPSSF  FPQPVLPP V SEP LHPPGT+PYSNS +LTSTYVGLE QPQFYADP
Sbjct: 23  PHIVNANPSSFHPFPQPVLPPAVPSEPGLHPPGTDPYSNSTVLTSTYVGLEPQPQFYADP 82

Query: 89  TVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFT 148
           ++ASH WV+PQ D AGFAF SLLENQIASTSSNS+L GNW TQSLA+NATRTKHVK+KFT
Sbjct: 83  SLASHTWVLPQLDAAGFAFKSLLENQIASTSSNSLLNGNWPTQSLAYNATRTKHVKTKFT 142

Query: 149 QPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQ 208
           QPVRCEVCKI+CNSKDVFDKHVMG+KHKKNLE  NSSLT ST SD N  +LNQ G+VSGQ
Sbjct: 143 QPVRCEVCKIDCNSKDVFDKHVMGRKHKKNLEVPNSSLTSSTPSDGNTIVLNQMGNVSGQ 202

Query: 209 VAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQ 268
           VA+   DVPAA KG  +KKRKL D+  KAD  RVCTVCN+VC SQEVFDKH SGKKHAAQ
Sbjct: 203 VAQVTADVPAARKGLKSKKRKLIDTSMKADCTRVCTVCNIVCTSQEVFDKHTSGKKHAAQ 262

Query: 269 AVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLK 328
           A LTSQ PY  AI  QYDG+ KKK KKNKVVQ AWCEVCKISCNSNEIYA HLSGKKHLK
Sbjct: 263 AALTSQVPYVTAIGPQYDGNLKKKLKKNKVVQSAWCEVCKISCNSNEIYAVHLSGKKHLK 322

Query: 329 NIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLETK 388
           N+EK +KG SD   S+  Q AT P+IGP ENP+ NNPSSD IQKTQ SS  QTPE+LETK
Sbjct: 323 NVEKVKKGTSDVSTSSTPQLATVPVIGPMENPAANNPSSDGIQKTQTSS-TQTPEELETK 382

Query: 389 KRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLVT 448
           KRKIV+SG+AA+SVRTC+ICNVVCNSQTVFDSHL+GQKHA+MMKKQGVSGMSM+VPPL+T
Sbjct: 383 KRKIVKSGSAANSVRTCTICNVVCNSQTVFDSHLAGQKHATMMKKQGVSGMSMVVPPLIT 442

Query: 449 ALPN 453
           ALPN
Sbjct: 443 ALPN 445

[Close]

BLAST of Carg17937 vs. TrEMBL
Match: tr|A0A1S3BVR6|A0A1S3BVR6_CUCME (zinc finger protein 346 OS=Cucumis melo OX=3656 GN=LOC103494025 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 4.2e-181
Identity = 334/428 (78.04%), Postives = 366/428 (85.51%), Query Frame = 0


Query: 29  PHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADP 88
           PHIVN +P SF  FPQPVLPPGVASEP LHPPGT+PYSNSA+LTS+YVGLE QPQFYADP
Sbjct: 27  PHIVNAHP-SFPPFPQPVLPPGVASEPGLHPPGTDPYSNSAVLTSSYVGLEPQPQFYADP 86

Query: 89  TVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFT 148
           ++ASHNW++PQ D AGFAF SLLE+QIASTSSNS+L GNW  QSLA++ +RTKHVK+KFT
Sbjct: 87  SLASHNWILPQPDAAGFAFKSLLESQIASTSSNSLLNGNWPVQSLANSGSRTKHVKTKFT 146

Query: 149 QPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQ 208
           QPVRCE+CKI+CNSKDVFDKHVMGKKHKKNL   NSS  GST SD N  +LNQ G+VSGQ
Sbjct: 147 QPVRCEICKIDCNSKDVFDKHVMGKKHKKNLGVPNSSRMGSTPSDGNTNVLNQMGNVSGQ 206

Query: 209 VAEGALDVPAAIKG----QNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKK 268
           VA+   DVPAA KG    + +KKRKL D+  KAD  RVCTVCN+VCNSQEVFDKHLSGKK
Sbjct: 207 VAQVTADVPAARKGLMSKKMSKKRKLIDTSMKADPVRVCTVCNIVCNSQEVFDKHLSGKK 266

Query: 269 HAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGK 328
           HAAQA LTS  PY AAI  QYDGS KKK KKNKVVQ AWCEVCKISCNSNEIYA HLSGK
Sbjct: 267 HAAQAALTSHVPYVAAIGPQYDGSLKKKLKKNKVVQSAWCEVCKISCNSNEIYAMHLSGK 326

Query: 329 KHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPED 388
           KHLKN+EK EKG SD   SNA Q AT P+IGP ENP  NNPSSDDIQKTQKSS  QTPE 
Sbjct: 327 KHLKNVEKVEKGKSDVSTSNAPQLATVPVIGPMENPVANNPSSDDIQKTQKSS-TQTPEG 386

Query: 389 LETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVP 448
           LETKKRKIV+SG AA+SVRTC+ICNVVCNSQTVFDSHL+GQKHASMMKKQGVSGMS++VP
Sbjct: 387 LETKKRKIVKSGRAANSVRTCTICNVVCNSQTVFDSHLAGQKHASMMKKQGVSGMSIVVP 446

Query: 449 PLVTALPN 453
           PL+TALPN
Sbjct: 447 PLITALPN 452

[Close]

BLAST of Carg17937 vs. TrEMBL
Match: tr|A0A2P4LDK0|A0A2P4LDK0_QUESU (Zinc finger protein 346 OS=Quercus suber OX=58331 GN=CFP56_46115 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.6e-103
Identity = 220/427 (51.52%), Postives = 285/427 (66.74%), Query Frame = 0


Query: 35  NPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHN 94
           +P+ F  FPQPVLP   AS+ +LHPPGT+P++NS +  ST+VG     QF  DP  AS N
Sbjct: 51  SPNLFLSFPQPVLPS--ASDSLLHPPGTDPFANSGLYPSTHVGPGSHVQFPEDPNAASKN 110

Query: 95  WVVPQSDPAGFAFI----SLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFTQP 154
           WV  Q++P  +  I    SL EN IAS+SSNS+    W  Q L ++AT     ++KF Q 
Sbjct: 111 WVYKQAEPIRYDSIPASNSLHENSIASSSSNSLWNNYWTNQHLTNDATEIVPKQTKFVQS 170

Query: 155 VRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVA 214
           +RCEVCKI+CNSK+V++KH+ GKKH +NL+AQ                     S+ GQV 
Sbjct: 171 MRCEVCKIDCNSKEVYEKHMRGKKHLRNLQAQ-----------------VPRSSIDGQVI 230

Query: 215 EGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV 274
            GA    AA +   TKK+KL +    ADS RVCT+CNV CN+QEVF+KHL+GK++A+QA 
Sbjct: 231 FGA-SGGAAGEDLGTKKQKLLNGDAAADSVRVCTICNVTCNNQEVFNKHLAGKRNASQAD 290

Query: 275 LTSQN---PYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 334
           L + N   PY AA++SQ   + KK P KNKVVQ AWC VCKI+CNSN++Y KHLSGKKH 
Sbjct: 291 LVALNGVGPYIAAVKSQISSTWKKFPVKNKVVQSAWCSVCKINCNSNDVYVKHLSGKKHQ 350

Query: 335 KNIEKAEKGWSD--AGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTP-ED 394
           KN+EK  K  ++  A ASNAL + T PIIGP ENP  N   +     +   + +Q P ED
Sbjct: 351 KNMEKQSKSKNEVSAPASNALPAPTNPIIGPVENPDANKGKAVAKNSSNNVAESQAPRED 410

Query: 395 LETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLV- 450
           LETKKRK++E G AA +VRTC+ICNVVCNSQ+VF+SHL+GQKHA+M+KKQ  +G++M   
Sbjct: 411 LETKKRKVLECGAAAGAVRTCTICNVVCNSQSVFNSHLAGQKHAAMVKKQAEAGIAMAAA 457

[Close]

BLAST of Carg17937 vs. TrEMBL
Match: tr|A0A2N9HIF4|A0A2N9HIF4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39352 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.0e-102
Identity = 221/426 (51.88%), Postives = 283/426 (66.43%), Query Frame = 0


Query: 35  NPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHN 94
           NP+ F  FPQPVLP    SEP+LH PGT+P++NS    ST+VGL    Q   DP  AS N
Sbjct: 54  NPNLFLSFPQPVLP----SEPLLHAPGTDPFANSGSYPSTHVGLGSHFQVSEDPNAASQN 113

Query: 95  WVVPQSDPAGFAFI----SLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFTQP 154
           WV  Q++P  +  +    SL EN I STS  S+    WA Q+LA++AT+    ++K  Q 
Sbjct: 114 WVFKQAEPIRYEAVPASNSLHENSIVSTSLTSLWNNYWANQALANDATKIIPKQNKVVQS 173

Query: 155 VRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVA 214
           + CEVCKI+CNSK+V++KH++GKKH+K+L+ Q SS+ G         M   +G  +G+  
Sbjct: 174 MWCEVCKIDCNSKEVYEKHILGKKHQKHLQVQLSSMGGQV-------MFGVSGVATGE-- 233

Query: 215 EGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV 274
                        +TKKRKL +     DS RVCT+CNV CNS EVF+KHL+GK+H +QA 
Sbjct: 234 -----------DLDTKKRKLLNGSAAVDSVRVCTICNVTCNSLEVFNKHLAGKRHTSQAG 293

Query: 275 LTSQN---PYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHL 334
           L S +   P+ AA+RSQ   +  K P KNKVVQ AWCEVCKI+CNS E+Y KHLSGKKHL
Sbjct: 294 LISLDGVGPHIAAVRSQASSTWNKFPVKNKVVQSAWCEVCKINCNSCEVYIKHLSGKKHL 353

Query: 335 KNIEKAEKGWSD--AGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTP-ED 394
           KN+EK  K  +D  A ASNAL + T PIIGP ENP  N   S   Q + K + +Q P ED
Sbjct: 354 KNLEKLSKPMNDVSAPASNALPAPTNPIIGPMENPDANKGKS-VAQISVKVAESQVPKED 413

Query: 395 LETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKK-QGVSGMSMLV 450
           LETK+RK++E G AA +VRTC+ICNVVCNSQTVFDSHL+GQKHA+M+KK Q  +G++M  
Sbjct: 414 LETKRRKVLEGGAAAGAVRTCTICNVVCNSQTVFDSHLAGQKHAAMVKKQQAEAGIAMPG 454

[Close]

BLAST of Carg17937 vs. TrEMBL
Match: tr|A0A2I4EML0|A0A2I4EML0_9ROSI (zinc finger protein 346-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108990959 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.0e-94
Identity = 212/435 (48.74%), Postives = 278/435 (63.91%), Query Frame = 0


Query: 28  QPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYAD 87
           QPH    NP  F  FPQPVLP  + S   LHPPGT+P++      ST+V      Q+Y D
Sbjct: 46  QPHTTIPNP--FLSFPQPVLPSDLTSSSDLHPPGTDPFAYPGSYPSTHVEHGAHFQYYVD 105

Query: 88  PTVASHNWVVPQSDPAGF--AFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKS 147
           P  +S NWV   S+P G+  A  SL EN I  TSS+S+   + A Q+LA +AT     ++
Sbjct: 106 PNASSQNWV---SEPIGYEAAINSLCENSIVPTSSSSLWSNHLANQTLAKDATGIIPKQT 165

Query: 148 KFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSS----LTGSTSSDRNIYMLNQ 207
              Q  RCE+CKI+C+ K+ ++KH++GK+H +NL+ QN+S    L GS+ +  +I   +Q
Sbjct: 166 DVVQSNRCELCKIDCSGKEAYEKHILGKRHNRNLQVQNNSTSTMLPGSSVTMSDI--PSQ 225

Query: 208 TGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLS 267
             S+ GQ   GA  +    K   TKKRKL   G   DS R+C++CN+ CNSQEVF+KHL+
Sbjct: 226 VPSIDGQTIFGASGLVDG-KELETKKRKLLAGGAAVDSVRICSICNIACNSQEVFNKHLA 285

Query: 268 GKKHAAQAVLTSQN---PYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYA 327
           GKKHA+QA L S N   PY AAIR+Q     K   KKNKVVQ AWCEVCKI+CNS +IY 
Sbjct: 286 GKKHASQARLISLNGVGPYIAAIRAQDGSIWKNTLKKNKVVQSAWCEVCKINCNSTDIYT 345

Query: 328 KHLSGKKHLKNIEKAEKGWSDAGA--SNALQSATEPIIGPTENPSTNNPSSDDIQKTQKS 387
           KH+ GKKH KN+EK  K  +D  A  SNA  ++T P+IGP ENP  +  +S      +K 
Sbjct: 346 KHILGKKHQKNLEKLSKSNNDTTALTSNATPASTNPVIGPMENPEASKGNSVVPNSRKKV 405

Query: 388 SAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGV 447
           + +  PE+LE KK KI++ G AA +VRTCSICNVVCNSQ VF+SHL+GQKHA+M+KKQ  
Sbjct: 406 ARSLAPEELEMKKLKILQGGAAAGAVRTCSICNVVCNSQKVFNSHLAGQKHAAMVKKQVE 465

Query: 448 SGMSMLV--PPLVTA 450
           +G +     P L+TA
Sbjct: 466 AGTATGAGGPQLITA 472

The following BLAST results are available for this feature:

BLAST of Carg17937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922000.1	1.9e-238	99.76	zinc finger protein 346-like [Cucurbita moschata]	[more]
XP_023516884.1	1.4e-236	99.06	zinc finger protein 346-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988251.1	6.6e-231	97.18	zinc finger protein 346-like [Cucurbita maxima]	[more]
XP_004138185.2	1.4e-183	78.54	PREDICTED: zinc finger protein 346 [Cucumis sativus] >KGN63710.1 hypothetical pr...	[more]
XP_022135503.1	3.9e-183	78.35	zinc finger protein 346-like [Momordica charantia]	[more]

BLAST of Carg17937 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61190.1	9.5e-22	31.89	putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain	[more]

BLAST of Carg17937 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8AVN9\|ZN346_XENLA	1.8e-06	25.47	Zinc finger protein 346 OS=Xenopus laevis OX=8355 GN=znf346 PE=1 SV=1	[more]
sp\|Q5REX3\|ZFR_PONAB	1.6e-05	28.13	Zinc finger RNA-binding protein OS=Pongo abelii OX=9601 GN=ZFR PE=2 SV=1	[more]
sp\|B0JZ85\|ZN346_XENTR	1.6e-05	24.87	Zinc finger protein 346 OS=Xenopus tropicalis OX=8364 GN=znf346 PE=2 SV=2	[more]
sp\|Q96KR1\|ZFR_HUMAN	2.6e-05	28.13	Zinc finger RNA-binding protein OS=Homo sapiens OX=9606 GN=ZFR PE=1 SV=2	[more]
sp\|O88532\|ZFR_MOUSE	4.5e-05	29.21	Zinc finger RNA-binding protein OS=Mus musculus OX=10090 GN=Zfr PE=1 SV=2	[more]

BLAST of Carg17937 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LP87\|A0A0A0LP87_CUCSA	9.0e-184	78.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012110 PE=4 SV=1	[more]
tr\|A0A1S3BVR6\|A0A1S3BVR6_CUCME	4.2e-181	78.04	zinc finger protein 346 OS=Cucumis melo OX=3656 GN=LOC103494025 PE=4 SV=1	[more]
tr\|A0A2P4LDK0\|A0A2P4LDK0_QUESU	1.6e-103	51.52	Zinc finger protein 346 OS=Quercus suber OX=58331 GN=CFP56_46115 PE=4 SV=1	[more]
tr\|A0A2N9HIF4\|A0A2N9HIF4_FAGSY	3.0e-102	51.88	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39352 PE=4 SV=1	[more]
tr\|A0A2I4EML0\|A0A2I4EML0_9ROSI	1.0e-94	48.74	zinc finger protein 346-like isoform X2 OS=Juglans regia OX=51240 GN=LOC10899095...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR003604	Matrin/U1-like-C_Znf_C2H2
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17937-RA	Carg17937-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 241..265 e-value: 3.7 score: 16.5 coord: 151..175 e-value: 3.6 score: 16.6 coord: 302..326 e-value: 88.0 score: 4.9 coord: 403..427 e-value: 4.7 score: 16.2
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 238..272 e-value: 0.0026 score: 27.0 coord: 299..333 e-value: 6.2E-4 score: 29.1 coord: 148..182 e-value: 5.3E-4 score: 29.3 coord: 400..434 e-value: 2.4E-5 score: 33.8
None	No IPR available	PFAM	PF12874	zf-met	coord: 152..175 e-value: 3.2E-5 score: 24.0 coord: 404..427 e-value: 7.5E-8 score: 32.4 coord: 243..265 e-value: 2.6E-7 score: 30.7 coord: 303..326 e-value: 6.5E-7 score: 29.4
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 287..336 e-value: 1.5E-10 score: 42.4 coord: 224..273 e-value: 2.8E-10 score: 41.5 coord: 133..187 e-value: 3.2E-10 score: 41.3 coord: 387..438 e-value: 2.8E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..392
None	No IPR available	PANTHER	PTHR23067	DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN	coord: 277..434
None	No IPR available	PANTHER	PTHR23067:SF70	SUBFAMILY NOT NAMED	coord: 5..269 coord: 277..434
None	No IPR available	PANTHER	PTHR23067	DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN	coord: 5..269
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 286..333
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 236..268
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 135..182
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 399..433

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17937	Cla019076	Watermelon (97103) v1	carwmB0460
Carg17937	Csa1G012110	Cucumber (Chinese Long) v2	carcuB0493
Carg17937	MELO3C017209	Melon (DHL92) v3.5.1	carmeB0468
Carg17937	ClCG06G015820	Watermelon (Charleston Gray)	carwcgB0450
Carg17937	CSPI01G02700	Wild cucumber (PI 183967)	carcpiB0499
Carg17937	CmaCh10G002220	Cucurbita maxima (Rimu)	carcmaB0640
Carg17937	CmoCh10G002330	Cucurbita moschata (Rifu)	carcmoB0622
Carg17937	Lsi06G014300	Bottle gourd (USVL1VR-Ls)	carlsiB419
Carg17937	Cp4.1LG18g07600	Cucurbita pepo (Zucchini)	carcpeB0646
Carg17937	CsGy1G002730	Cucumber (Gy14) v2	carcgybB0470
Carg17937	MELO3C017209.2	Melon (DHL92) v3.6.1	carmedB0471
Carg17937	CsaV3_1G002740	Cucumber (Chinese Long) v3	carcucB0496
Carg17937	Cla97C06G125390	Watermelon (97103) v2	carwmbB0486
Carg17937	Bhi02G000179	Wax gourd	carwgoB0562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17937	Silver-seed gourd	carcarB060
Carg17937	Cucumber (Gy14) v1	carcgyB0531
Carg17937	Cucumber (Gy14) v1	carcgyB0533
Carg17937	Cucurbita maxima (Rimu)	carcmaB0643
Carg17937	Cucurbita maxima (Rimu)	carcmaB0646
Carg17937	Cucurbita moschata (Rifu)	carcmoB0624
Carg17937	Cucurbita moschata (Rifu)	carcmoB0628
Carg17937	Cucurbita pepo (Zucchini)	carcpeB0648
Carg17937	Cucurbita pepo (Zucchini)	carcpeB0649
Carg17937	Wild cucumber (PI 183967)	carcpiB0501
Carg17937	Cucumber (Chinese Long) v2	carcuB0495
Carg17937	Cucumber (Chinese Long) v3	carcucB0498
Carg17937	Bottle gourd (USVL1VR-Ls)	carlsiB418
Carg17937	Melon (DHL92) v3.5.1	carmeB0466
Carg17937	Melon (DHL92) v3.6.1	carmedB0469
Carg17937	Watermelon (Charleston Gray)	carwcgB0448
Carg17937	Watermelon (97103) v1	carwmB0458
Carg17937	Watermelon (97103) v2	carwmbB0483
Carg17937	Wax gourd	carwgoB0559