Carg17895 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATGAATGTACTTAATATCACGACGCAGATATGTATATTCTGCTTTCCTACTTCTTCTGTCATCCCCCTTCATGACCATCCTGGGATGACTGTGTTCAGCAAAGTTCTCTATGGTTCTCTCCATGTGAAAGCCTATGACTGGGTTGAACCTGCCTTCATTCAGGAAAATAAGGACTCCACCAATTTTCCAGGTTTGATTTCCAATACCAACTTGTTTTCTGGATGTACAGAAACAATCAACGAATAGTAATTTATCATTTTGAGTTTTGGTTTCGTACTGTTTTACTAGATTATAAATATTTTTCGCTGTTAGTGTAAAATGAACTTTTGCTAGATAGGAATGTCACTGCATAACATTATGAACACTCGAGTGTACAATGTTCAACCATGTCCATGAGTCCATGACTATTGTATATCAGTAAGGGCAATTGTAGATTATTGTGCAGTTGACTGAATCTATGCACCGATGATCGTTGACGTATTAAAGATACCATTGAGTCATCTTGGCGTTTGGCTATTACCTTCTGTATGCAACTCTCTCTTCTCCTTTGTTTTTGGCTGAAACAACTGTTGCAACAATTTTTTAGTATGTTACCGATGAGCTGGTTGTGTATGCTGGCTTGCATTTCCCCTGTGGGATATCAGTTTATAGGTCATGAATTTATATACTACTAGAGATTGATACCAAGAGTTTCATCTACATTGTTAGGCACTAAGAGGATGCATCCTTTATCTTTTTGAATGCAAATTATGGGATTTCCTCTCATGAATTCCTCCCACCCTCCCAACATTTTTTTCCAGGAAGATTAGCTAAGTTATCAGTTGATAAAGTTCTAACAGCATCAAGTGGAACATCCATTTTGTACCCGAAGACCGGAGGTAATCTGCATTGTTTCACTGCAGTTTCGCCTTGTGCCGTGCTTGATGTTCTCTCGCCTCCTTATAACGAAGATAAAGGAAGAAGATGTACATACTTCCATGACTATCCTTATTCAACTTTTTGTAAGTAACCTTTTCTCCTTTATGTTTCTTGAATTTTATTATTCAATCAACAAATCTTAGACACCGTGGCTCTGCAAAAAATCAGCTGCAGAATCCAAACCCAACCTAAACGATGAAGAAGTAGAAGATTACGCCTGGCTTGCAAAAATCGAGACCCCTGATGATCTATACATGCGTCCGGGGGTGTACGCTGGTCCTGCTATTCAAATTTAGGCGTTGACAGATTCAGGATTATTGAGATTCTTCCAACGTCTACCAGGAAAGCTGCTTCTACCTGGGATTATACACTAGATTTAGCTTTTGAGAGGAGGTTGATGTTTTTGTCCTTTAAGCTGAGTTTACACAGTATTGATGACAGAATTGTAAGGTAAAAGCTGCACCCAGTTGCTTGCTGTTTTATC ATGCTTATGAATGTACTTAATATCACGACGCAGATATGTATATTCTGCTTTCCTACTTCTTCTGTCATCCCCCTTCATGACCATCCTGGGATGACTGTGTTCAGCAAAGTTCTCTATGGTTCTCTCCATGTGAAAGCCTATGACTGGGTTGAACCTGCCTTCATTCAGGAAAATAAGGACTCCACCAATTTTCCAGAGGATGCATCCTTTATCTTTTTGAATGCAAATTATGGGATTTCCTCTCATGAATTCCTCCCACCCTCCCAACATTTTTTTCCAGGAAGATTAGCTAAGTTATCAGTTGATAAAGTTCTAACAGCATCAAGTGGAACATCCATTTTGTACCCGAAGACCGGAGGTAATCTGCATTGTTTCACTGCAGTTTCGCCTTGTGCCGTGCTTGATGTTCTCTCGCCTCCTTATAACGAAGATAAAGGAAGAAGATGTACATACTTCCATGACTATCCTTATTCAACTTTTTCTGCAGAATCCAAACCCAACCTAAACGATGAAGAAGTAGAAGATTACGCCTGGCTTGCAAAAATCGAGACCCCTGATGATCTATACATGCGTCCGGGGGTGTACGCTGGTCCTGCTATTCAAATTTAGGCGTTGACAGATTCAGGATTATTGAGATTCTTCCAACGTCTACCAGGAAAGCTGCTTCTACCTGGGATTATACACTAGATTTAGCTTTTGAGAGGAGGTTGATGTTTTTGTCCTTTAAGCTGAGTTTACACAGTATTGATGACAGAATTGTAAGGTAAAAGCTGCACCCAGTTGCTTGCTGTTTTATC ATGCTTATGAATGTACTTAATATCACGACGCAGATATGTATATTCTGCTTTCCTACTTCTTCTGTCATCCCCCTTCATGACCATCCTGGGATGACTGTGTTCAGCAAAGTTCTCTATGGTTCTCTCCATGTGAAAGCCTATGACTGGGTTGAACCTGCCTTCATTCAGGAAAATAAGGACTCCACCAATTTTCCAGAGGATGCATCCTTTATCTTTTTGAATGCAAATTATGGGATTTCCTCTCATGAATTCCTCCCACCCTCCCAACATTTTTTTCCAGGAAGATTAGCTAAGTTATCAGTTGATAAAGTTCTAACAGCATCAAGTGGAACATCCATTTTGTACCCGAAGACCGGAGGTAATCTGCATTGTTTCACTGCAGTTTCGCCTTGTGCCGTGCTTGATGTTCTCTCGCCTCCTTATAACGAAGATAAAGGAAGAAGATGTACATACTTCCATGACTATCCTTATTCAACTTTTTCTGCAGAATCCAAACCCAACCTAAACGATGAAGAAGTAGAAGATTACGCCTGGCTTGCAAAAATCGAGACCCCTGATGATCTATACATGCGTCCGGGGGTGTACGCTGGTCCTGCTATTCAAATTTAG MLMNVLNITTQICIFCFPTSSVIPLHDHPGMTVFSKVLYGSLHVKAYDWVEPAFIQENKDSTNFPEDASFIFLNANYGISSHEFLPPSQHFFPGRLAKLSVDKVLTASSGTSILYPKTGGNLHCFTAVSPCAVLDVLSPPYNEDKGRRCTYFHDYPYSTFSAESKPNLNDEEVEDYAWLAKIETPDDLYMRPGVYAGPAIQI
BLAST of Carg17895 vs. NCBI nr
Match: XP_022921368.1 (plant cysteine oxidase 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 4.8e-88 Identity = 163/191 (85.34%), Postives = 163/191 (85.34%), Query Frame = 0
BLAST of Carg17895 vs. NCBI nr
Match: XP_023516979.1 (plant cysteine oxidase 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87 Identity = 161/191 (84.29%), Postives = 163/191 (85.34%), Query Frame = 0
BLAST of Carg17895 vs. NCBI nr
Match: XP_022988474.1 (plant cysteine oxidase 3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 320.1 bits (819), Expect = 5.5e-84 Identity = 156/191 (81.68%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of Carg17895 vs. NCBI nr
Match: XP_022921369.1 (plant cysteine oxidase 3 isoform X2 [Cucurbita moschata]) HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81 Identity = 154/191 (80.63%), Postives = 154/191 (80.63%), Query Frame = 0
BLAST of Carg17895 vs. NCBI nr
Match: XP_022988475.1 (plant cysteine oxidase 3 isoform X2 [Cucurbita maxima]) HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78 Identity = 149/191 (78.01%), Postives = 152/191 (79.58%), Query Frame = 0
BLAST of Carg17895 vs. TAIR10
Match: AT1G18490.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 223.4 bits (568), Expect = 1.3e-58 Identity = 112/195 (57.44%), Postives = 131/195 (67.18%), Query Frame = 0
BLAST of Carg17895 vs. TAIR10
Match: AT5G39890.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42 Identity = 88/191 (46.07%), Postives = 115/191 (60.21%), Query Frame = 0
BLAST of Carg17895 vs. TAIR10
Match: AT2G42670.2 (Protein of unknown function (DUF1637)) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38 Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Carg17895 vs. TAIR10
Match: AT5G15120.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 155.6 bits (392), Expect = 3.2e-38 Identity = 84/193 (43.52%), Postives = 111/193 (57.51%), Query Frame = 0
BLAST of Carg17895 vs. TAIR10
Match: AT3G58670.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-34 Identity = 75/190 (39.47%), Postives = 99/190 (52.11%), Query Frame = 0
BLAST of Carg17895 vs. Swiss-Prot
Match: sp|Q1G3U6|PCO3_ARATH (Plant cysteine oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PCO3 PE=1 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.3e-57 Identity = 112/195 (57.44%), Postives = 131/195 (67.18%), Query Frame = 0
BLAST of Carg17895 vs. Swiss-Prot
Match: sp|Q8LGJ5|PCO2_ARATH (Plant cysteine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PCO2 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.0e-41 Identity = 88/191 (46.07%), Postives = 115/191 (60.21%), Query Frame = 0
BLAST of Carg17895 vs. Swiss-Prot
Match: sp|Q9SJI9|PCO4_ARATH (Plant cysteine oxidase 4 OS=Arabidopsis thaliana OX=3702 GN=PCO4 PE=1 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37 Identity = 82/190 (43.16%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Carg17895 vs. Swiss-Prot
Match: sp|Q9LXG9|PCO1_ARATH (Plant cysteine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PCO1 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.8e-37 Identity = 84/193 (43.52%), Postives = 111/193 (57.51%), Query Frame = 0
BLAST of Carg17895 vs. Swiss-Prot
Match: sp|Q9LXT4|PCO5_ARATH (Plant cysteine oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=PCO5 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.0e-33 Identity = 75/190 (39.47%), Postives = 99/190 (52.11%), Query Frame = 0
BLAST of Carg17895 vs. TrEMBL
Match: tr|A0A0A0LSH5|A0A0A0LSH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014440 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 4.7e-76 Identity = 140/190 (73.68%), Postives = 151/190 (79.47%), Query Frame = 0
BLAST of Carg17895 vs. TrEMBL
Match: tr|A0A1S4DZM0|A0A1S4DZM0_CUCME (plant cysteine oxidase 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494087 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 8.1e-76 Identity = 140/193 (72.54%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of Carg17895 vs. TrEMBL
Match: tr|A0A1S4DZJ4|A0A1S4DZJ4_CUCME (plant cysteine oxidase 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494087 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75 Identity = 140/191 (73.30%), Postives = 151/191 (79.06%), Query Frame = 0
BLAST of Carg17895 vs. TrEMBL
Match: tr|A0A1S3BWT0|A0A1S3BWT0_CUCME (plant cysteine oxidase 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494087 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75 Identity = 140/191 (73.30%), Postives = 151/191 (79.06%), Query Frame = 0
BLAST of Carg17895 vs. TrEMBL
Match: tr|A0A1S4E0B0|A0A1S4E0B0_CUCME (plant cysteine oxidase 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494087 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75 Identity = 140/191 (73.30%), Postives = 151/191 (79.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |