BLAST of Carg17887 vs. NCBI nr
Match:
XP_022921451.1 (pentatricopeptide repeat-containing protein At1g18485 [Cucurbita moschata])
HSP 1 Score: 1967.2 bits (5095), Expect = 0.0e+00
Identity = 974/981 (99.29%), Postives = 979/981 (99.80%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIRKLTSSSILKCSLLLISSPKSSFSVSAQTHQAQSIKLVSELS 60
MAVVAPPFSCRYRAPTTIRKLTSSSILKCSLLLISSPKSSFSVSAQTHQAQSIKLVSELS
Sbjct: 1 MAVVAPPFSCRYRAPTTIRKLTSSSILKCSLLLISSPKSSFSVSAQTHQAQSIKLVSELS 60
Query: 61 LLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
LLEEICELCEA DLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD
Sbjct: 61 LLEEICELCEASDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
Query: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY 180
EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY
Sbjct: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY 180
Query: 181 DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA 240
DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA
Sbjct: 181 DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA 240
Query: 241 MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLI 300
MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLI
Sbjct: 241 MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLI 300
Query: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL
Sbjct: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
Query: 361 FHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEET 420
FHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEET
Sbjct: 361 FHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEET 420
Query: 421 ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIG 480
ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIG
Sbjct: 421 ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIG 480
Query: 481 GYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEM 540
GYAHNGDP+KAFDFYFRMRRSGYFLD+FSISTLLLACARLRHLQYGKE+HGFVLRNGLEM
Sbjct: 481 GYAHNGDPRKAFDFYFRMRRSGYFLDDFSISTLLLACARLRHLQYGKEIHGFVLRNGLEM 540
Query: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQML 600
DSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQML
Sbjct: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQML 600
Query: 601 SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLG 660
SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLK+RLIEDNFVACSLMDMYAKSGCLG
Sbjct: 601 SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKSRLIEDNFVACSLMDMYAKSGCLG 660
Query: 661 RSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC 720
RSQRIFNGLN+KEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC
Sbjct: 661 RSQRIFNGLNKKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC 720
Query: 721 HAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
HAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW
Sbjct: 721 HAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
Query: 781 SSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL 840
SSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL
Sbjct: 781 SSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL 840
Query: 841 NLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHE 900
NLQKAAGCSWIELGGK YSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHE
Sbjct: 841 NLQKAAGCSWIELGGKIYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHE 900
Query: 901 LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII
Sbjct: 901 LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
Query: 961 IRDNKRFHHFKNGICSCGDYW 982
IRDNKRFHHFKNGICSCGDYW
Sbjct: 961 IRDNKRFHHFKNGICSCGDYW 981
BLAST of Carg17887 vs. NCBI nr
Match:
XP_022987922.1 (pentatricopeptide repeat-containing protein At1g18485 [Cucurbita maxima])
HSP 1 Score: 1919.4 bits (4971), Expect = 0.0e+00
Identity = 951/981 (96.94%), Postives = 965/981 (98.37%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIRKLTSSSILKCSLLLISSPKSSFSVSAQTHQAQSIKLVSELS 60
MAVVAPPFSCRYRAP TIRKLTS+SILKCS L ISSP+ SFSVSAQTHQAQSIKLVSELS
Sbjct: 1 MAVVAPPFSCRYRAP-TIRKLTSNSILKCSFLSISSPELSFSVSAQTHQAQSIKLVSELS 60
Query: 61 LLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
LLEEICELCEAGDLNGA DFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD
Sbjct: 61 LLEEICELCEAGDLNGALDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
Query: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY 180
EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNR LFQWNALVSGYVRNELY
Sbjct: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRKLFQWNALVSGYVRNELY 180
Query: 181 DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA 240
DEAIHTFIELISVT FQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA
Sbjct: 181 DEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA 240
Query: 241 MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLI 300
MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSEN+LWLEAFGAFRRLLES DGLI
Sbjct: 241 MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENQLWLEAFGAFRRLLESGDGLI 300
Query: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL
Sbjct: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
Query: 361 FHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEET 420
FHKIENKNVVSWNSMVGAYSREGFV+ETFELLRKMWMEEEMIKVNEVTILNLLPAC+EET
Sbjct: 361 FHKIENKNVVSWNSMVGAYSREGFVHETFELLRKMWMEEEMIKVNEVTILNLLPACLEET 420
Query: 421 ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIG 480
ELLSLRELHGYSLRHWFQYD+SINNAFIAAYAKCGSLSSAEH+FSGM+TKSVSSWNAIIG
Sbjct: 421 ELLSLRELHGYSLRHWFQYDKSINNAFIAAYAKCGSLSSAEHVFSGMDTKSVSSWNAIIG 480
Query: 481 GYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEM 540
GYAHNGDP+KAFDFYFRMRRSG+ LD FSISTLLLACARLRHL YGKE+HGFVLRNGLEM
Sbjct: 481 GYAHNGDPRKAFDFYFRMRRSGFILDYFSISTLLLACARLRHLHYGKEIHGFVLRNGLEM 540
Query: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQML 600
DSFVAVSLLSLYIHCSKPFYARTFFERI+VKNSVCWNAMLSGYSQNELPNEAIS FRQML
Sbjct: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIEVKNSVCWNAMLSGYSQNELPNEAISFFRQML 600
Query: 601 SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLG 660
SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNF+ACSLMDMYAKSGCLG
Sbjct: 601 SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFIACSLMDMYAKSGCLG 660
Query: 661 RSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC 720
RSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC
Sbjct: 661 RSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC 720
Query: 721 HAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
HAGLVSEGL YLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW
Sbjct: 721 HAGLVSEGLNYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
Query: 781 SSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL 840
SSLLSSSRTY DLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL
Sbjct: 781 SSLLSSSRTYSDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL 840
Query: 841 NLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHE 900
NLQKAAGCSWIELGGK YSFIAGNDLSILDSN+IRKMWNRLEKQIVEIGYTPDSSCVLHE
Sbjct: 841 NLQKAAGCSWIELGGKIYSFIAGNDLSILDSNKIRKMWNRLEKQIVEIGYTPDSSCVLHE 900
Query: 901 LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
LEEEEKIKILK HSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII
Sbjct: 901 LEEEEKIKILKEHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
Query: 961 IRDNKRFHHFKNGICSCGDYW 982
IRDNKRFHHFKNGICSCGDYW
Sbjct: 961 IRDNKRFHHFKNGICSCGDYW 980
BLAST of Carg17887 vs. NCBI nr
Match:
XP_023516931.1 (pentatricopeptide repeat-containing protein At1g18485 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1919.4 bits (4971), Expect = 0.0e+00
Identity = 945/981 (96.33%), Postives = 964/981 (98.27%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIRKLTSSSILKCSLLLISSPKSSFSVSAQTHQAQSIKLVSELS 60
MAVVAPPFSCRYRAPT+IRKLT +SI K S++ SSPKSSFSVSAQTHQAQSIKLVSELS
Sbjct: 1 MAVVAPPFSCRYRAPTSIRKLTPTSIFKNSIISTSSPKSSFSVSAQTHQAQSIKLVSELS 60
Query: 61 LLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
LLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD
Sbjct: 61 LLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIGRELD 120
Query: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY 180
EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY
Sbjct: 121 EMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELY 180
Query: 181 DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNA 240
DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQS HGMAVKMG IMDLFVGNA
Sbjct: 181 DEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSFHGMAVKMGLIMDLFVGNA 240
Query: 241 MISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLI 300
MISLYGKCGLVD+AIKVFDKMPERNLISWNS ICGFSENELWLEAFGAFRRLLES DGLI
Sbjct: 241 MISLYGKCGLVDDAIKVFDKMPERNLISWNSFICGFSENELWLEAFGAFRRLLESGDGLI 300
Query: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
PDVATIVTLLPVCSGEGDVDMGMVIHG ALKLGLVRELMVCNALVDMYSKCGYLSQAALL
Sbjct: 301 PDVATIVTLLPVCSGEGDVDMGMVIHGTALKLGLVRELMVCNALVDMYSKCGYLSQAALL 360
Query: 361 FHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEET 420
FHKIENKNVVSWNSMVGAYSREGFV ETFELLRK+WMEEEMIKVNEVTILNLLPAC+EET
Sbjct: 361 FHKIENKNVVSWNSMVGAYSREGFVNETFELLRKIWMEEEMIKVNEVTILNLLPACLEET 420
Query: 421 ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIG 480
ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEH+FSGMNTKSVSSWNAIIG
Sbjct: 421 ELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHVFSGMNTKSVSSWNAIIG 480
Query: 481 GYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEM 540
GYAHNGDP+KAFDFYFRMRRSG+ LD+FSISTLLLACARLRHLQYGKE+HGFVLRNGLEM
Sbjct: 481 GYAHNGDPRKAFDFYFRMRRSGFILDDFSISTLLLACARLRHLQYGKEIHGFVLRNGLEM 540
Query: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQML 600
DSFVAVSLLSLYIHCSKPFYARTFFERI+VKNSVCWNAMLSGYSQNELPNEAISLFRQML
Sbjct: 541 DSFVAVSLLSLYIHCSKPFYARTFFERIEVKNSVCWNAMLSGYSQNELPNEAISLFRQML 600
Query: 601 SEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLG 660
SEGLKPNEI MASVLGACSELSALSLGREVHCFVLKNR IEDNFVACSLMDMYAKS CLG
Sbjct: 601 SEGLKPNEIGMASVLGACSELSALSLGREVHCFVLKNRFIEDNFVACSLMDMYAKSSCLG 660
Query: 661 RSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACC 720
RSQRIFNGL EKEAASWNVMITGFGVHGQGNKA+ELFEEMQRLNKQPDRFTFLGVLQACC
Sbjct: 661 RSQRIFNGLKEKEAASWNVMITGFGVHGQGNKALELFEEMQRLNKQPDRFTFLGVLQACC 720
Query: 721 HAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
HAGLVSEGLYYLAQMQSLYKL+PELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW
Sbjct: 721 HAGLVSEGLYYLAQMQSLYKLKPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIW 780
Query: 781 SSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDL 840
SSLLSSSRTYGDLAMGEKAAEKLLALE NKADSY+LLSNLYATAGKWDLVRMVRQKMKDL
Sbjct: 781 SSLLSSSRTYGDLAMGEKAAEKLLALEVNKADSYVLLSNLYATAGKWDLVRMVRQKMKDL 840
Query: 841 NLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHE 900
NLQKAAGCSWIELGGKTYSFIAGNDLSI++SNEIRKMWNRLEKQI+EIGYTPDSSCVLHE
Sbjct: 841 NLQKAAGCSWIELGGKTYSFIAGNDLSIVNSNEIRKMWNRLEKQIMEIGYTPDSSCVLHE 900
Query: 901 LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII
Sbjct: 901 LEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREII 960
Query: 961 IRDNKRFHHFKNGICSCGDYW 982
IRDNKRFHHFKNGICSCGDYW
Sbjct: 961 IRDNKRFHHFKNGICSCGDYW 981
BLAST of Carg17887 vs. NCBI nr
Match:
XP_008453326.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo])
HSP 1 Score: 1632.8 bits (4227), Expect = 0.0e+00
Identity = 814/993 (81.97%), Postives = 881/993 (88.72%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIR---------KLTSSSILKCSLLLISSPKSSF---SVSAQTH 60
MAVVAP FS R+R+P + K SLL S+PKSS+ S QTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPXXXXXXXXXXXXXXXFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 61 QAQSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCG 120
Q++SI VS+LSLLEEI +LCEAGDLNGA DFLQR WKNN GYDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 121 QFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWN 180
Q+K+VEIGR+LDEML VSSQFS DFVLNTRLITMYS+CGYP ++RLVFDRLQN+NLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 181 ALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVK 240
ALVSGYVRN+LYDEAIHTFIELISVT FQPDNFT PCLIKACTGKCDV LG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 241 MGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGA 300
MG IMDLFVGNAMISLYGK G +DEA++VFDKMPE+NLISWNSLICGFSEN WLEA+ A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 301 FRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMY 360
FR LLES DGL PDVAT+VTLLPVCSGEG+VDMGM+IHGMA+KLGLV ELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 361 SKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVT 420
SKCG LS+AA+LF KIENKNVVSWNSM+GAYSREGFV+ETF+LLRKMW EE+M +VNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 421 ILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMN 480
ILN LPAC+EETELLSL+ LHGYSLR FQY+E INN FIAAYAKCGSL SAEH+F GMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 481 TKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKE 540
TKSVSSWNAIIG YA NGDP+KA DFYF M R G D+FSI +LLLAC RL HLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 541 MHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNEL 600
+HGFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT FER++ KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 601 PNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACS 660
PNE +S FRQMLSEGL+P+EI + SVLGACS+LSAL LG+EVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 661 LMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPD 720
LMDMYAKSG LG SQ+IFNGLN+KE ASWNVMITGFGVHGQGNKAVELFE+MQR NKQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 721 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLI 780
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGRAGRLNEALN I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 781 NEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWD 840
NEMPEEPDAKIWSSLLSSS T+ DL MGEK EKLLALEANKADSYILLSNLYATAGKWD
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKWD 840
Query: 841 LVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEI 900
+VRMVRQKMKDL+LQK AGCSWIEL GK YSFIAG + S S+EIRKMWNRLEKQIVEI
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGEN-SNSSSDEIRKMWNRLEKQIVEI 900
Query: 901 GYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAA 960
GYTPD SCVLHELEE EKIKILKGHSEKLAISFGFLNTKEGTTLRI KNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 961 KFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
K+ISKAAKREI+IRDNKRFHHFKNGICSCG+YW
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992
BLAST of Carg17887 vs. NCBI nr
Match:
XP_004138328.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >KGN63758.1 hypothetical protein Csa_1G015040 [Cucumis sativus])
HSP 1 Score: 1626.7 bits (4211), Expect = 0.0e+00
Identity = 809/991 (81.63%), Postives = 883/991 (89.10%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIR-------KLTSSSILKCSLLLISSPKSSF---SVSAQTHQA 60
MAVVAP FS +R+P + LK SLL S+PKSS+ S Q+HQ+
Sbjct: 1 MAVVAPLFSGCHRSPIMYKPXXXXXXXXXXXXXLKNSLLSTSTPKSSYFFVSARTQSHQS 60
Query: 61 QSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQF 120
+S+ VS+LSLLEEI +LCEAGDLNGA DFLQR WKNN GYDL QRKEAMG+LLQKCGQ+
Sbjct: 61 RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
Query: 121 KDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNAL 180
K+VEIGR+LDEML VSSQFSGDFVLNTRLITMYS+CGYP ++RLVFDRL N+NLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
Query: 181 VSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMG 240
VSGYVRNELYDEAIHTF+ELISVT FQPDNFT PCLIKACTGKCD+ LG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
Query: 241 FIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFR 300
IMDLFVGNAMI+LYGKCG +DEA+++FDKMPE+NLISWNSLI GFSEN WLEA+ AFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
Query: 301 RLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSK 360
LLES DGLIPDVAT+VTLLPVCSGEG+VD+GMVIHGMA+KLGLV ELMVCNAL+DMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
Query: 361 CGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTIL 420
CG LS+AA+LF KIENK+VVSWNSM+GAYSREGFV+ETF+LLRKMWMEEE+++VNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
Query: 421 NLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTK 480
NLLPAC+EE+ELLSLR LHGYSLRH FQY E INNAFIAAYAKCGSL AEH+F GMNTK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 481 SVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMH 540
SVSSWNA+IGG+A NGDP KA DFYF M R G D+FSI +LLLAC RL LQYGKE+H
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 541 GFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPN 600
GFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT+FE + KNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
Query: 601 EAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLM 660
EA+SLFRQMLS+GL+P+EIA+AS+LGACS+LSAL LG+EVHCF LKN L+EDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
Query: 661 DMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRF 720
DMYAKSG LG SQRIFN LN KE ASWNVMITGFGVHGQGNKAVELFE+M+R +KQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
Query: 721 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINE 780
TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGRAGRLNEALN INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
Query: 781 MPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLV 840
MPEEPDAKIWSSLLSSS TY DL MGEK AEKLLALEANKADSYILLSNLYATAGKWD+V
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
Query: 841 RMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGY 900
RMVRQKMKDL+LQK GCSWIEL GK YSFIAG + S S+EIRKMWNRLEKQIVEIGY
Sbjct: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGEN-SNPSSDEIRKMWNRLEKQIVEIGY 900
Query: 901 TPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKF 960
TPD SCVLHELEE EK KILKGHSEK+AI FGFLNTKEGTTLRI KNLRICRDCHNAAK+
Sbjct: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
Query: 961 ISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
ISKAAKREI+IRDNKRFHHFK GICSCGDYW
Sbjct: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
BLAST of Carg17887 vs. TAIR10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 1013.1 bits (2618), Expect = 1.2e-295
Identity = 496/953 (52.05%), Postives = 683/953 (71.67%), Query Frame = 0
Query: 35 SSPKSSFSVSAQTHQAQSIKLVSELSLLEEICELCEAGDLNGAFDFLQR--GWKNNGGYD 94
S +SSF + + S + L I CE GDL+ +F +Q G +
Sbjct: 20 SRKESSFPRAVYNSNSISSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESSSDA 79
Query: 95 LVQRKEAMGVLLQKCGQFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDA 154
+ +EA+G+LLQ G+ KD+E+GR++ +++ S++ D VL TR+ITMY+MCG P D+
Sbjct: 80 FLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDS 139
Query: 155 RLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTG 214
R VFD L+++NLFQWNA++S Y RNELYDE + TFIE+IS T PD+FT PC+IKAC G
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 215 KCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSL 274
DV +G +VHG+ VK G + D+FVGNA++S YG G V +A+++FD MPERNL+SWNS+
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 275 ICGFSENELWLEAFGAFRRLL-ESSDG-LIPDVATIVTLLPVCSGEGDVDMGMVIHGMAL 334
I FS+N E+F ++ E+ DG +PDVAT+VT+LPVC+ E ++ +G +HG A+
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 335 KLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFE 394
KL L +EL++ NAL+DMYSKCG ++ A ++F NKNVVSWN+MVG +S EG + TF+
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 395 LLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAA 454
+LR+M E +K +EVTILN +P C E+ L SL+ELH YSL+ F Y+E + NAF+A+
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 455 YAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSI 514
YAKCGSLS A+ +F G+ +K+V+SWNA+IGG+A + DP+ + D + +M+ SG D F++
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 515 STLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKV 574
+LL AC++L+ L+ GKE+HGF++RN LE D FV +S+LSLYIHC + + F+ ++
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 575 KNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREV 634
K+ V WN +++GY QN P+ A+ +FRQM+ G++ I+M V GACS L +L LGRE
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 635 HCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQG 694
H + LK+ L +D F+ACSL+DMYAK+G + +S ++FNGL EK ASWN MI G+G+HG
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 695 NKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYAC 754
+A++LFEEMQR PD TFLGVL AC H+GL+ EGL YL QM+S + L+P L+HYAC
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 755 VIDMLGRAGRLNEALNLI-NEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEAN 814
VIDMLGRAG+L++AL ++ EM EE D IW SLLSS R + +L MGEK A KL LE
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 815 KADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSIL 874
K ++Y+LLSNLYA GKW+ VR VRQ+M +++L+K AGCSWIEL K +SF+ G L
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE--RFL 859
Query: 875 DS-NEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKE 934
D EI+ +W+ LE +I ++GY PD+ V H+L EEEKI+ L+GHSEKLA+++G + T E
Sbjct: 860 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 919
Query: 935 GTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
GTT+R+ KNLRIC DCHNAAK ISK +REI++RDNKRFHHFKNG+CSCGDYW
Sbjct: 920 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
BLAST of Carg17887 vs. TAIR10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 624.0 bits (1608), Expect = 1.6e-178
Identity = 332/844 (39.34%), Postives = 506/844 (59.95%), Query Frame = 0
Query: 160 QNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLG 219
Q+R+ W L+ VR+ L EA+ T++++I V G +PDN+ P L+KA D+ LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELG 117
Query: 220 QSVHGMAVKMGFIMD-LFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSE 279
+ +H K G+ +D + V N +++LY KCG KVFD++ ERN +SWNSLI
Sbjct: 118 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 177
Query: 280 NELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSG----EGDVDMGMVIHGMALKLGL 339
E W A AFR +L+ + + P T+V+++ CS EG + MG +H L+ G
Sbjct: 178 FEKWEMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGE 237
Query: 340 VRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRK 399
+ ++ N LV MY K G L+ + +L +++V+WN+++ + + + E E LR+
Sbjct: 238 LNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 297
Query: 400 MWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDES-INNAFIAAYAK 459
M +E ++ +E TI ++LPAC L + +ELH Y+L++ + S + +A + Y
Sbjct: 298 MVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 357
Query: 460 CGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRS-GYFLDEFSIST 519
C + S +F GM + + WNA+I GY+ N ++A + M S G + +++
Sbjct: 358 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 417
Query: 520 LLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKN 579
++ AC R + +HGFV++ GL+ D FV +L+ +Y K A F +++ ++
Sbjct: 418 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 477
Query: 580 SVCWNAMLSGYSQNELPNEAISLFRQM------LSEG-----LKPNEIAMASVLGACSEL 639
V WN M++GY +E +A+ L +M +S+G LKPN I + ++L +C+ L
Sbjct: 478 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 537
Query: 640 SALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMI 699
SAL+ G+E+H + +KN L D V +L+DMYAK GCL S+++F+ + +K +WNV+I
Sbjct: 538 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 597
Query: 700 TGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKL 759
+G+HG G +A++L M +P+ TF+ V AC H+G+V EGL M+ Y +
Sbjct: 598 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 657
Query: 760 EPELEHYACVIDMLGRAGRLNEALNLINEMPEE-PDAKIWSSLLSSSRTYGDLAMGEKAA 819
EP +HYACV+D+LGRAGR+ EA L+N MP + A WSSLL +SR + +L +GE AA
Sbjct: 658 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 717
Query: 820 EKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSF 879
+ L+ LE N A Y+LL+N+Y++AG WD VR+ MK+ ++K GCSWIE G + + F
Sbjct: 718 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKF 777
Query: 880 IAGND---LSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKL 939
+AG+ S S + +W R+ K+ GY PD+SCVLH +EE+EK +L GHSEKL
Sbjct: 778 VAGDSSHPQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEKL 837
Query: 940 AISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSC 982
AI+FG LNT GT +R+ KNLR+C DCH A KFISK REII+RD +RFH FKNG CSC
Sbjct: 838 AIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSC 890
BLAST of Carg17887 vs. TAIR10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 561.6 bits (1446), Expect = 9.5e-160
Identity = 307/843 (36.42%), Postives = 472/843 (55.99%), Query Frame = 0
Query: 139 LITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQP 198
LI +YS G+ AR VFD L+ ++ W A++SG +NE EAI F ++ V G P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMP 287
Query: 199 DNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVF 258
+ ++ AC + +G+ +HG+ +K+GF D +V NA++SLY G + A +F
Sbjct: 288 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 347
Query: 259 DKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGD 318
M +R+ +++N+LI G S+ +A F+R+ DGL PD T+ +L+ CS +G
Sbjct: 348 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM--HLDGLEPDSNTLASLVVACSADGT 407
Query: 319 VDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGA 378
+ G +H KLG + AL+++Y+KC + A F + E +NVV WN M+ A
Sbjct: 408 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 467
Query: 379 YSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQ 438
Y + +F + R+M +EE I N+ T ++L C+ +L ++H ++ FQ
Sbjct: 468 YGLLDDLRNSFRIFRQMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 527
Query: 439 YDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRM 498
+ + + I YAK G L +A I K V SW +I GY KA + +M
Sbjct: 528 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 587
Query: 499 RRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKP 558
G DE ++ + ACA L+ L+ G+++H +G D +L++LY C K
Sbjct: 588 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 647
Query: 559 FYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGAC 618
+ FE+ + +++ WNA++SG+ Q+ EA+ +F +M EG+ N S + A
Sbjct: 648 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 707
Query: 619 SELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWN 678
SE + + G++VH + K + V +L+ MYAK G + +++ F ++ K SWN
Sbjct: 708 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 767
Query: 679 VMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSL 738
+I + HG G++A++ F++M N +P+ T +GVL AC H GLV +G+ Y M S
Sbjct: 768 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 827
Query: 739 YKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEK 798
Y L P+ EHY CV+DML RAG L+ A I EMP +PDA +W +LLS+ + ++ +GE
Sbjct: 828 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 887
Query: 799 AAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTY 858
AA LL LE + +Y+LLSNLYA + KWD + RQKMK+ ++K G SWIE+ +
Sbjct: 888 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 947
Query: 859 SFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLA 918
SF G+ L ++EI + + L K+ EIGY D +L+EL+ E+K I+ HSEKLA
Sbjct: 948 SFYVGDQNHPL-ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLA 1007
Query: 919 ISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCG 978
ISFG L+ + + KNLR+C DCH KF+SK + REII+RD RFHHF+ G CSC
Sbjct: 1008 ISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCK 1064
Query: 979 DYW 982
DYW
Sbjct: 1068 DYW 1064
BLAST of Carg17887 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 545.0 bits (1403), Expect = 9.2e-155
Identity = 290/777 (37.32%), Postives = 465/777 (59.85%), Query Frame = 0
Query: 206 LIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERN 265
L++ C+ ++R + + K G + F ++SL+ + G VDEA +VF+ + +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 102
Query: 266 LISWNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVI 325
+ +++++ GF++ +A F R+ D + P V LL VC E ++ +G I
Sbjct: 103 NVLYHTMLKGFAKVSDLDKALQFFVRM--RYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 162
Query: 326 HGMALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFV 385
HG+ +K G +L L +MY+KC +++A +F ++ +++VSWN++V YS+ G
Sbjct: 163 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 222
Query: 386 YETFELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSL-RELHGYSLRHWFQYDESIN 445
E+++ M EE +K + +TI+++LPA V L+S+ +E+HGY++R F +I+
Sbjct: 223 RMALEMVKSMC--EENLKPSFITIVSVLPA-VSALRLISVGKEIHGYAMRSGFDSLVNIS 282
Query: 446 NAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYF 505
A + YAKCGSL +A +F GM ++V SWN++I Y N +P++A + +M G
Sbjct: 283 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 342
Query: 506 LDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTF 565
+ S+ L ACA L L+ G+ +H + GL+ + V SL+S+Y C + A +
Sbjct: 343 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 402
Query: 566 FERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSAL 625
F +++ + V WNAM+ G++QN P +A++ F QM S +KP+ SV+ A +ELS
Sbjct: 403 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 462
Query: 626 SLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGF 685
+ +H V+++ L ++ FV +L+DMYAK G + ++ IF+ ++E+ +WN MI G+
Sbjct: 463 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 522
Query: 686 GVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPE 745
G HG G A+ELFEEMQ+ +P+ TFL V+ AC H+GLV GL M+ Y +E
Sbjct: 523 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 582
Query: 746 LEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLL 805
++HY ++D+LGRAGRLNEA + I +MP +P ++ ++L + + + ++ EKAAE+L
Sbjct: 583 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 642
Query: 806 ALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGN 865
L + ++LL+N+Y A W+ V VR M L+K GCS +E+ + +SF +G+
Sbjct: 643 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 702
Query: 866 DLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFL 925
+ DS +I +L I E GY PD++ VL +E + K ++L HSEKLAISFG L
Sbjct: 703 -TAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLL 762
Query: 926 NTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
NT GTT+ + KNLR+C DCHNA K+IS REI++RD +RFHHFKNG CSCGDYW
Sbjct: 763 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg17887 vs. TAIR10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 538.1 bits (1385), Expect = 1.1e-152
Identity = 293/855 (34.27%), Postives = 474/855 (55.44%), Query Frame = 0
Query: 130 SGDFVLNTRLITMYSMCGYPSDARLVFDRLQ-NRNLFQWNALVSGYVRNELYDEAIHTFI 189
S DF + +LI YS P+ + VF R+ +N++ WN+++ + +N L+ EA+ F
Sbjct: 37 SSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FY 96
Query: 190 ELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKC 249
+ + PD +T P +IKAC G D +G V+ + MGF DLFVGNA++ +Y +
Sbjct: 97 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 156
Query: 250 GLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVT 309
GL+ A +VFD+MP R+L+ L S ++PD T+ +
Sbjct: 157 GLLTRARQVFDEMPVRDLVXXXXXXXXXXXXXXXXXXXXXXHELKNS--WIVPDSFTVSS 216
Query: 310 LLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKN 369
+LP V G +HG ALK G+ ++V N LV MY K + A +F +++ ++
Sbjct: 217 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 276
Query: 370 VVSWNSMVGAYSREGFVYETFELLRKMWMEE-EMIKVNEVTILNLLPACVEETELLSLRE 429
VS+N+M+ Y + V E+ +M++E + K + +T+ ++L AC +L +
Sbjct: 277 SVSYNTMICGYLKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 336
Query: 430 LHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGD 489
++ Y L+ F + ++ N I YAKCG + +A +F+ M K SWN+II GY +GD
Sbjct: 337 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 396
Query: 490 PQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVS 549
+A + M D + L+ RL L++GK +H +++G+ +D V+ +
Sbjct: 397 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA 456
Query: 550 LLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPN 609
L+ +Y C + + F + ++V WN ++S + + + QM + P+
Sbjct: 457 LIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPD 516
Query: 610 EIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFN 669
L C+ L+A LG+E+HC +L+ + + +L++MY+K GCL S R+F
Sbjct: 517 MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE 576
Query: 670 GLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSE 729
++ ++ +W MI +G++G+G KA+E F +M++ PD F+ ++ AC H+GLV E
Sbjct: 577 RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDE 636
Query: 730 GLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSS 789
GL +M++ YK++P +EHYACV+D+L R+ ++++A I MP +PDA IW+S+L +
Sbjct: 637 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 696
Query: 790 RTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAG 849
RT GD+ E+ + +++ L + IL SN YA KWD V ++R+ +KD ++ K G
Sbjct: 697 RTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPG 756
Query: 850 CSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHEL-EEEEK 909
SWIE+G + F +G+D S S I K L + + GY PD V L EEEEK
Sbjct: 757 YSWIEVGKNVHVFSSGDD-SAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEK 816
Query: 910 IKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKR 969
+++ GHSE+LAI+FG LNT+ GT L++ KNLR+C DCH K ISK REI++RD R
Sbjct: 817 RRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANR 876
Query: 970 FHHFKNGICSCGDYW 982
FH FK+G CSC D W
Sbjct: 877 FHLFKDGTCSCKDRW 882
BLAST of Carg17887 vs. Swiss-Prot
Match:
sp|Q0WN60|PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 1013.1 bits (2618), Expect = 2.1e-294
Identity = 496/953 (52.05%), Postives = 683/953 (71.67%), Query Frame = 0
Query: 35 SSPKSSFSVSAQTHQAQSIKLVSELSLLEEICELCEAGDLNGAFDFLQR--GWKNNGGYD 94
S +SSF + + S + L I CE GDL+ +F +Q G +
Sbjct: 20 SRKESSFPRAVYNSNSISSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESSSDA 79
Query: 95 LVQRKEAMGVLLQKCGQFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDA 154
+ +EA+G+LLQ G+ KD+E+GR++ +++ S++ D VL TR+ITMY+MCG P D+
Sbjct: 80 FLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDS 139
Query: 155 RLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTG 214
R VFD L+++NLFQWNA++S Y RNELYDE + TFIE+IS T PD+FT PC+IKAC G
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 215 KCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSL 274
DV +G +VHG+ VK G + D+FVGNA++S YG G V +A+++FD MPERNL+SWNS+
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 275 ICGFSENELWLEAFGAFRRLL-ESSDG-LIPDVATIVTLLPVCSGEGDVDMGMVIHGMAL 334
I FS+N E+F ++ E+ DG +PDVAT+VT+LPVC+ E ++ +G +HG A+
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 335 KLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFE 394
KL L +EL++ NAL+DMYSKCG ++ A ++F NKNVVSWN+MVG +S EG + TF+
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 395 LLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAA 454
+LR+M E +K +EVTILN +P C E+ L SL+ELH YSL+ F Y+E + NAF+A+
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 455 YAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSI 514
YAKCGSLS A+ +F G+ +K+V+SWNA+IGG+A + DP+ + D + +M+ SG D F++
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 515 STLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKV 574
+LL AC++L+ L+ GKE+HGF++RN LE D FV +S+LSLYIHC + + F+ ++
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 575 KNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREV 634
K+ V WN +++GY QN P+ A+ +FRQM+ G++ I+M V GACS L +L LGRE
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 635 HCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQG 694
H + LK+ L +D F+ACSL+DMYAK+G + +S ++FNGL EK ASWN MI G+G+HG
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 695 NKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYAC 754
+A++LFEEMQR PD TFLGVL AC H+GL+ EGL YL QM+S + L+P L+HYAC
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 755 VIDMLGRAGRLNEALNLI-NEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEAN 814
VIDMLGRAG+L++AL ++ EM EE D IW SLLSS R + +L MGEK A KL LE
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 815 KADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSIL 874
K ++Y+LLSNLYA GKW+ VR VRQ+M +++L+K AGCSWIEL K +SF+ G L
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE--RFL 859
Query: 875 DS-NEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKE 934
D EI+ +W+ LE +I ++GY PD+ V H+L EEEKI+ L+GHSEKLA+++G + T E
Sbjct: 860 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 919
Query: 935 GTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
GTT+R+ KNLRIC DCHNAAK ISK +REI++RDNKRFHHFKNG+CSCGDYW
Sbjct: 920 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
BLAST of Carg17887 vs. Swiss-Prot
Match:
sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 624.0 bits (1608), Expect = 2.8e-177
Identity = 332/844 (39.34%), Postives = 506/844 (59.95%), Query Frame = 0
Query: 160 QNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLG 219
Q+R+ W L+ VR+ L EA+ T++++I V G +PDN+ P L+KA D+ LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELG 117
Query: 220 QSVHGMAVKMGFIMD-LFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSE 279
+ +H K G+ +D + V N +++LY KCG KVFD++ ERN +SWNSLI
Sbjct: 118 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 177
Query: 280 NELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSG----EGDVDMGMVIHGMALKLGL 339
E W A AFR +L+ + + P T+V+++ CS EG + MG +H L+ G
Sbjct: 178 FEKWEMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGE 237
Query: 340 VRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRK 399
+ ++ N LV MY K G L+ + +L +++V+WN+++ + + + E E LR+
Sbjct: 238 LNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 297
Query: 400 MWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDES-INNAFIAAYAK 459
M +E ++ +E TI ++LPAC L + +ELH Y+L++ + S + +A + Y
Sbjct: 298 MVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 357
Query: 460 CGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRS-GYFLDEFSIST 519
C + S +F GM + + WNA+I GY+ N ++A + M S G + +++
Sbjct: 358 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 417
Query: 520 LLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKN 579
++ AC R + +HGFV++ GL+ D FV +L+ +Y K A F +++ ++
Sbjct: 418 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 477
Query: 580 SVCWNAMLSGYSQNELPNEAISLFRQM------LSEG-----LKPNEIAMASVLGACSEL 639
V WN M++GY +E +A+ L +M +S+G LKPN I + ++L +C+ L
Sbjct: 478 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 537
Query: 640 SALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMI 699
SAL+ G+E+H + +KN L D V +L+DMYAK GCL S+++F+ + +K +WNV+I
Sbjct: 538 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 597
Query: 700 TGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKL 759
+G+HG G +A++L M +P+ TF+ V AC H+G+V EGL M+ Y +
Sbjct: 598 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 657
Query: 760 EPELEHYACVIDMLGRAGRLNEALNLINEMPEE-PDAKIWSSLLSSSRTYGDLAMGEKAA 819
EP +HYACV+D+LGRAGR+ EA L+N MP + A WSSLL +SR + +L +GE AA
Sbjct: 658 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 717
Query: 820 EKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSF 879
+ L+ LE N A Y+LL+N+Y++AG WD VR+ MK+ ++K GCSWIE G + + F
Sbjct: 718 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKF 777
Query: 880 IAGND---LSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKL 939
+AG+ S S + +W R+ K+ GY PD+SCVLH +EE+EK +L GHSEKL
Sbjct: 778 VAGDSSHPQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEKL 837
Query: 940 AISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSC 982
AI+FG LNT GT +R+ KNLR+C DCH A KFISK REII+RD +RFH FKNG CSC
Sbjct: 838 AIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSC 890
BLAST of Carg17887 vs. Swiss-Prot
Match:
sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 603.2 bits (1554), Expect = 5.1e-171
Identity = 323/888 (36.37%), Postives = 506/888 (56.98%), Query Frame = 0
Query: 98 EAMGVLLQKCGQFKDVEIGREL-DEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVF 157
EA +L+ CG+ + V GR+L + + F DF L +L+ MY CG DA VF
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVF 140
Query: 158 DRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDV 217
D + +R F WN ++ YV N A+ + + V G + P L+KAC D+
Sbjct: 141 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDI 200
Query: 218 RLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPER-NLISWNSLICG 277
R G +H + VK+G+ F+ NA++S+Y K + A ++FD E+ + + WNS++
Sbjct: 201 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 260
Query: 278 FSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGL- 337
+S + LE FR + G P+ TIV+ L C G +G IH LK
Sbjct: 261 YSTSGKSLETLELFREM--HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 320
Query: 338 VRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRK 397
EL VCNAL+ MY++CG + QA + ++ N +VV+WNS++ Y + E E
Sbjct: 321 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 380
Query: 398 MWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKC 457
M K +EV++ +++ A + LL+ ELH Y ++H + + + N I Y+KC
Sbjct: 381 MIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 440
Query: 458 GSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLL 517
F M+ K + SW +I GYA N +A + + + + +DE + ++L
Sbjct: 441 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 500
Query: 518 LACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSV 577
A + L+ + KE+H +LR GL +D+ + L+ +Y C YA FE IK K+ V
Sbjct: 501 RASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 560
Query: 578 CWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFV 637
W +M+S + N +EA+ LFR+M+ GL + +A+ +L A + LSAL+ GRE+HC++
Sbjct: 561 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 620
Query: 638 LKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAV 697
L+ + +A +++DMYA G L ++ +F+ + K + MI +G+HG G AV
Sbjct: 621 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 680
Query: 698 ELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDM 757
ELF++M+ N PD +FL +L AC HAGL+ EG +L M+ Y+LEP EHY C++DM
Sbjct: 681 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 740
Query: 758 LGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSY 817
LGRA + EA + M EP A++W +LL++ R++ + +GE AA++LL LE +
Sbjct: 741 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 800
Query: 818 ILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEI 877
+L+SN++A G+W+ V VR KMK ++K GCSWIE+ GK + F A D S +S EI
Sbjct: 801 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTA-RDKSHPESKEI 860
Query: 878 RKMWNRLEKQIV-EIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLR 937
+ + + +++ E+GY D+ VLH ++E EK+++L GHSE++AI++G L T + LR
Sbjct: 861 YEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLR 920
Query: 938 ICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
I KNLR+CRDCH K +SK +R+I++RD RFHHF++G+CSCGD W
Sbjct: 921 ITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
BLAST of Carg17887 vs. Swiss-Prot
Match:
sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 561.6 bits (1446), Expect = 1.7e-158
Identity = 307/843 (36.42%), Postives = 472/843 (55.99%), Query Frame = 0
Query: 139 LITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQP 198
LI +YS G+ AR VFD L+ ++ W A++SG +NE EAI F ++ V G P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMP 287
Query: 199 DNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVF 258
+ ++ AC + +G+ +HG+ +K+GF D +V NA++SLY G + A +F
Sbjct: 288 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 347
Query: 259 DKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGD 318
M +R+ +++N+LI G S+ +A F+R+ DGL PD T+ +L+ CS +G
Sbjct: 348 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM--HLDGLEPDSNTLASLVVACSADGT 407
Query: 319 VDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGA 378
+ G +H KLG + AL+++Y+KC + A F + E +NVV WN M+ A
Sbjct: 408 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 467
Query: 379 YSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQ 438
Y + +F + R+M +EE I N+ T ++L C+ +L ++H ++ FQ
Sbjct: 468 YGLLDDLRNSFRIFRQMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 527
Query: 439 YDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRM 498
+ + + I YAK G L +A I K V SW +I GY KA + +M
Sbjct: 528 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 587
Query: 499 RRSGYFLDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKP 558
G DE ++ + ACA L+ L+ G+++H +G D +L++LY C K
Sbjct: 588 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 647
Query: 559 FYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGAC 618
+ FE+ + +++ WNA++SG+ Q+ EA+ +F +M EG+ N S + A
Sbjct: 648 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 707
Query: 619 SELSALSLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWN 678
SE + + G++VH + K + V +L+ MYAK G + +++ F ++ K SWN
Sbjct: 708 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 767
Query: 679 VMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSL 738
+I + HG G++A++ F++M N +P+ T +GVL AC H GLV +G+ Y M S
Sbjct: 768 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 827
Query: 739 YKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEK 798
Y L P+ EHY CV+DML RAG L+ A I EMP +PDA +W +LLS+ + ++ +GE
Sbjct: 828 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 887
Query: 799 AAEKLLALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTY 858
AA LL LE + +Y+LLSNLYA + KWD + RQKMK+ ++K G SWIE+ +
Sbjct: 888 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 947
Query: 859 SFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLA 918
SF G+ L ++EI + + L K+ EIGY D +L+EL+ E+K I+ HSEKLA
Sbjct: 948 SFYVGDQNHPL-ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLA 1007
Query: 919 ISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCG 978
ISFG L+ + + KNLR+C DCH KF+SK + REII+RD RFHHF+ G CSC
Sbjct: 1008 ISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCK 1064
Query: 979 DYW 982
DYW
Sbjct: 1068 DYW 1064
BLAST of Carg17887 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 545.0 bits (1403), Expect = 1.7e-153
Identity = 290/777 (37.32%), Postives = 465/777 (59.85%), Query Frame = 0
Query: 206 LIKACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERN 265
L++ C+ ++R + + K G + F ++SL+ + G VDEA +VF+ + +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 102
Query: 266 LISWNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVI 325
+ +++++ GF++ +A F R+ D + P V LL VC E ++ +G I
Sbjct: 103 NVLYHTMLKGFAKVSDLDKALQFFVRM--RYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 162
Query: 326 HGMALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFV 385
HG+ +K G +L L +MY+KC +++A +F ++ +++VSWN++V YS+ G
Sbjct: 163 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 222
Query: 386 YETFELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSL-RELHGYSLRHWFQYDESIN 445
E+++ M EE +K + +TI+++LPA V L+S+ +E+HGY++R F +I+
Sbjct: 223 RMALEMVKSMC--EENLKPSFITIVSVLPA-VSALRLISVGKEIHGYAMRSGFDSLVNIS 282
Query: 446 NAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYF 505
A + YAKCGSL +A +F GM ++V SWN++I Y N +P++A + +M G
Sbjct: 283 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 342
Query: 506 LDEFSISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTF 565
+ S+ L ACA L L+ G+ +H + GL+ + V SL+S+Y C + A +
Sbjct: 343 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 402
Query: 566 FERIKVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSAL 625
F +++ + V WNAM+ G++QN P +A++ F QM S +KP+ SV+ A +ELS
Sbjct: 403 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 462
Query: 626 SLGREVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGF 685
+ +H V+++ L ++ FV +L+DMYAK G + ++ IF+ ++E+ +WN MI G+
Sbjct: 463 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 522
Query: 686 GVHGQGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPE 745
G HG G A+ELFEEMQ+ +P+ TFL V+ AC H+GLV GL M+ Y +E
Sbjct: 523 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 582
Query: 746 LEHYACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLL 805
++HY ++D+LGRAGRLNEA + I +MP +P ++ ++L + + + ++ EKAAE+L
Sbjct: 583 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 642
Query: 806 ALEANKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGN 865
L + ++LL+N+Y A W+ V VR M L+K GCS +E+ + +SF +G+
Sbjct: 643 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGS 702
Query: 866 DLSILDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFL 925
+ DS +I +L I E GY PD++ VL +E + K ++L HSEKLAISFG L
Sbjct: 703 -TAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLL 762
Query: 926 NTKEGTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
NT GTT+ + KNLR+C DCHNA K+IS REI++RD +RFHHFKNG CSCGDYW
Sbjct: 763 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of Carg17887 vs. TrEMBL
Match:
tr|A0A1S3BX48|A0A1S3BX48_CUCME (pentatricopeptide repeat-containing protein At1g18485 OS=Cucumis melo OX=3656 GN=LOC103494078 PE=4 SV=1)
HSP 1 Score: 1632.8 bits (4227), Expect = 0.0e+00
Identity = 814/993 (81.97%), Postives = 881/993 (88.72%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIR---------KLTSSSILKCSLLLISSPKSSF---SVSAQTH 60
MAVVAP FS R+R+P + K SLL S+PKSS+ S QTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPXXXXXXXXXXXXXXXFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 61 QAQSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCG 120
Q++SI VS+LSLLEEI +LCEAGDLNGA DFLQR WKNN GYDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 121 QFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWN 180
Q+K+VEIGR+LDEML VSSQFS DFVLNTRLITMYS+CGYP ++RLVFDRLQN+NLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 181 ALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVK 240
ALVSGYVRN+LYDEAIHTFIELISVT FQPDNFT PCLIKACTGKCDV LG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 241 MGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGA 300
MG IMDLFVGNAMISLYGK G +DEA++VFDKMPE+NLISWNSLICGFSEN WLEA+ A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 301 FRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMY 360
FR LLES DGL PDVAT+VTLLPVCSGEG+VDMGM+IHGMA+KLGLV ELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 361 SKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVT 420
SKCG LS+AA+LF KIENKNVVSWNSM+GAYSREGFV+ETF+LLRKMW EE+M +VNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 421 ILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMN 480
ILN LPAC+EETELLSL+ LHGYSLR FQY+E INN FIAAYAKCGSL SAEH+F GMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 481 TKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKE 540
TKSVSSWNAIIG YA NGDP+KA DFYF M R G D+FSI +LLLAC RL HLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 541 MHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNEL 600
+HGFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT FER++ KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 601 PNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACS 660
PNE +S FRQMLSEGL+P+EI + SVLGACS+LSAL LG+EVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 661 LMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPD 720
LMDMYAKSG LG SQ+IFNGLN+KE ASWNVMITGFGVHGQGNKAVELFE+MQR NKQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 721 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLI 780
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGRAGRLNEALN I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 781 NEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWD 840
NEMPEEPDAKIWSSLLSSS T+ DL MGEK EKLLALEANKADSYILLSNLYATAGKWD
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKWD 840
Query: 841 LVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEI 900
+VRMVRQKMKDL+LQK AGCSWIEL GK YSFIAG + S S+EIRKMWNRLEKQIVEI
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGEN-SNSSSDEIRKMWNRLEKQIVEI 900
Query: 901 GYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAA 960
GYTPD SCVLHELEE EKIKILKGHSEKLAISFGFLNTKEGTTLRI KNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 961 KFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
K+ISKAAKREI+IRDNKRFHHFKNGICSCG+YW
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992
BLAST of Carg17887 vs. TrEMBL
Match:
tr|A0A0A0LPM0|A0A0A0LPM0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015040 PE=4 SV=1)
HSP 1 Score: 1626.7 bits (4211), Expect = 0.0e+00
Identity = 809/991 (81.63%), Postives = 883/991 (89.10%), Query Frame = 0
Query: 1 MAVVAPPFSCRYRAPTTIR-------KLTSSSILKCSLLLISSPKSSF---SVSAQTHQA 60
MAVVAP FS +R+P + LK SLL S+PKSS+ S Q+HQ+
Sbjct: 1 MAVVAPLFSGCHRSPIMYKPXXXXXXXXXXXXXLKNSLLSTSTPKSSYFFVSARTQSHQS 60
Query: 61 QSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQF 120
+S+ VS+LSLLEEI +LCEAGDLNGA DFLQR WKNN GYDL QRKEAMG+LLQKCGQ+
Sbjct: 61 RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
Query: 121 KDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNAL 180
K+VEIGR+LDEML VSSQFSGDFVLNTRLITMYS+CGYP ++RLVFDRL N+NLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
Query: 181 VSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMG 240
VSGYVRNELYDEAIHTF+ELISVT FQPDNFT PCLIKACTGKCD+ LG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
Query: 241 FIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFR 300
IMDLFVGNAMI+LYGKCG +DEA+++FDKMPE+NLISWNSLI GFSEN WLEA+ AFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
Query: 301 RLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSK 360
LLES DGLIPDVAT+VTLLPVCSGEG+VD+GMVIHGMA+KLGLV ELMVCNAL+DMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
Query: 361 CGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTIL 420
CG LS+AA+LF KIENK+VVSWNSM+GAYSREGFV+ETF+LLRKMWMEEE+++VNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
Query: 421 NLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTK 480
NLLPAC+EE+ELLSLR LHGYSLRH FQY E INNAFIAAYAKCGSL AEH+F GMNTK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 481 SVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMH 540
SVSSWNA+IGG+A NGDP KA DFYF M R G D+FSI +LLLAC RL LQYGKE+H
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 541 GFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPN 600
GFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT+FE + KNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
Query: 601 EAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLM 660
EA+SLFRQMLS+GL+P+EIA+AS+LGACS+LSAL LG+EVHCF LKN L+EDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
Query: 661 DMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRF 720
DMYAKSG LG SQRIFN LN KE ASWNVMITGFGVHGQGNKAVELFE+M+R +KQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
Query: 721 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINE 780
TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGRAGRLNEALN INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
Query: 781 MPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLV 840
MPEEPDAKIWSSLLSSS TY DL MGEK AEKLLALEANKADSYILLSNLYATAGKWD+V
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
Query: 841 RMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGY 900
RMVRQKMKDL+LQK GCSWIEL GK YSFIAG + S S+EIRKMWNRLEKQIVEIGY
Sbjct: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGEN-SNPSSDEIRKMWNRLEKQIVEIGY 900
Query: 901 TPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKF 960
TPD SCVLHELEE EK KILKGHSEK+AI FGFLNTKEGTTLRI KNLRICRDCHNAAK+
Sbjct: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
Query: 961 ISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
ISKAAKREI+IRDNKRFHHFK GICSCGDYW
Sbjct: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
BLAST of Carg17887 vs. TrEMBL
Match:
tr|A0A2N9F3P0|A0A2N9F3P0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9645 PE=4 SV=1)
HSP 1 Score: 1284.2 bits (3322), Expect = 0.0e+00
Identity = 626/953 (65.69%), Postives = 769/953 (80.69%), Query Frame = 0
Query: 30 SLLLISSPKSSFSVSAQTHQ-AQSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNN 89
SLL I +PK+S S+S TH+ S + LL+ +LC++G+L A +FLQR +N
Sbjct: 34 SLLPIFTPKASLSLSTHTHKTTHSQTQTTSNPLLQHFHKLCDSGNLTEALNFLQRDSLSN 93
Query: 90 GGYDLVQRKEAMGVLLQKCGQFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGY 149
++ VQ+ EA+GVLLQ CG KD+E GR++ +M+ S+QFS DFVLNTRLITMYSMCG
Sbjct: 94 AIFNSVQKAEALGVLLQACGHRKDIETGRKVHQMVSASTQFSNDFVLNTRLITMYSMCGS 153
Query: 150 PSDARLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIK 209
P D+RLVFD L+ +NLF WNALVSGY RNELY EAI F ELISVT F+PDNFTLPC+IK
Sbjct: 154 PLDSRLVFDGLKRKNLFLWNALVSGYARNELYVEAITLFTELISVTEFKPDNFTLPCVIK 213
Query: 210 ACTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLIS 269
AC G DV LG+ +HGMA+KMG I D+FVGNA+I+LYGKCG V+EA+KVF+ MPERNL+S
Sbjct: 214 ACAGNLDVGLGKVIHGMAMKMGLISDVFVGNALIALYGKCGFVEEAVKVFECMPERNLVS 273
Query: 270 WNSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGM 329
WNS+I GFSEN + E++ FR +LE +GL+PDVAT+VT+LPVC+ GDV MGMV+H +
Sbjct: 274 WNSMISGFSENGFFRESYHMFREILEGEEGLVPDVATLVTVLPVCAAVGDVIMGMVVHCL 333
Query: 330 ALKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYET 389
A+KLGL L+V NAL+ MYSKCGY ++A +LF K NKNVVSWNSM+G YSREG V T
Sbjct: 334 AVKLGLNHNLIVNNALIHMYSKCGYFTEAEILFAKSNNKNVVSWNSMIGGYSREGNVCRT 393
Query: 390 FELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFI 449
F+LLRKM ME +KVNEVTILN+L AC+EE+E+L L+ELHGYS RH QYD+ + NAF+
Sbjct: 394 FDLLRKMQMELGNMKVNEVTILNVLQACLEESEMLCLKELHGYSFRHGLQYDQLVANAFV 453
Query: 450 AAYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEF 509
AAYAKCGSLSSAEH+F G+ TK+V+SWNA+IGG+A NGDP+ A D YF+M SG D +
Sbjct: 454 AAYAKCGSLSSAEHVFYGIETKTVNSWNALIGGHAQNGDPRMALDSYFQMTYSGIDPDWY 513
Query: 510 SISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERI 569
SI +LLLACA L+ L YGKE+HGFVLRNGLEMDSF+ +SLLSLY+ C K AR F+R+
Sbjct: 514 SIGSLLLACAHLKCLCYGKEIHGFVLRNGLEMDSFIGISLLSLYVQCRKVLSARALFDRM 573
Query: 570 KVKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGR 629
+ K V WNAM+SGYSQN LP+E+++LFRQML +G++P EIA+ S+ GACS+LSAL LG+
Sbjct: 574 ESKILVSWNAMISGYSQNGLPDESLNLFRQMLFDGIQPYEIAITSIFGACSQLSALRLGK 633
Query: 630 EVHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHG 689
E+HCF LK +L ED FV CSL+DMYAKSGC+ +SQR+F+ L EK+ ASWNV+I G+G+HG
Sbjct: 634 EMHCFALKAQLTEDIFVGCSLIDMYAKSGCIEQSQRVFDSLKEKDEASWNVIIAGYGIHG 693
Query: 690 QGNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHY 749
GNKA+ELFE+MQ +PD FTF+G+L AC HAGLV+EGL YL+QMQ+LY +EP+LEHY
Sbjct: 694 HGNKAMELFEQMQISGHKPDGFTFIGLLMACSHAGLVTEGLKYLSQMQNLYGIEPKLEHY 753
Query: 750 ACVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEA 809
ACV+DMLGRAG+L+EAL LI EMPEEPDA IWSSLLSS R YGD MG K AEKLLALE
Sbjct: 754 ACVVDMLGRAGQLDEALKLILEMPEEPDAGIWSSLLSSCRIYGDWDMGAKVAEKLLALEP 813
Query: 810 NKADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSI 869
+KA++Y+LLSNLYA +GKWD VR VRQ+MKD LQK AG SWIELGGK YSF+ G++L +
Sbjct: 814 DKAENYVLLSNLYAGSGKWDDVRRVRQRMKDTGLQKDAGRSWIELGGKVYSFVVGDEL-L 873
Query: 870 LDSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKE 929
+S EIR MW RLE++I +IGY P++ VLHEL EEEKI++L+GHSEKLAISFG LNT +
Sbjct: 874 SESEEIRYMWRRLEEKISKIGYKPNTDSVLHELREEEKIEVLRGHSEKLAISFGLLNTTK 933
Query: 930 GTTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
G TLRICKNLRIC DCHNAAK ISKAA+REII+RDNKRFHHFK+G CSC DYW
Sbjct: 934 GVTLRICKNLRICVDCHNAAKLISKAAEREIIVRDNKRFHHFKDGFCSCQDYW 985
BLAST of Carg17887 vs. TrEMBL
Match:
tr|A0A2I4DJP2|A0A2I4DJP2_9ROSI (pentatricopeptide repeat-containing protein At1g18485 OS=Juglans regia OX=51240 GN=LOC108980817 PE=4 SV=1)
HSP 1 Score: 1274.6 bits (3297), Expect = 0.0e+00
Identity = 615/952 (64.60%), Postives = 766/952 (80.46%), Query Frame = 0
Query: 34 ISSPKSSFSVSAQTHQAQSIKLVS----ELSLLEEICELCEAGDLNGAFDFLQRGWKNNG 93
I +PK+S S S TH+ + S LSLL+EI LC+ G+L A +FL R + N
Sbjct: 37 IFTPKASLSFSTHTHKRHTDSPASNSAPRLSLLQEINRLCQCGNLTEALNFLHRDFINVN 96
Query: 94 GYDLVQRKEAMGVLLQKCGQFKDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYP 153
D +R EAMGVLLQ CGQ KD+E GR++ EM+ S+Q S +FV+NTRLITMYSMCG P
Sbjct: 97 S-DSAERAEAMGVLLQACGQQKDMETGRKVHEMVSASTQLSNNFVINTRLITMYSMCGSP 156
Query: 154 SDARLVFDRLQNRNLFQWNALVSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKA 213
++RLVFD LQ RNLF WNA+VSGY RNELYD AI F ELISVT F+PDNFTLPC+IKA
Sbjct: 157 LNSRLVFDGLQRRNLFLWNAIVSGYARNELYDGAISLFTELISVTEFKPDNFTLPCVIKA 216
Query: 214 CTGKCDVRLGQSVHGMAVKMGFIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISW 273
C G DV LGQ +HGMA+K G + D+FVGNA+I++YGKCG V EA+KV + MP+RNL+SW
Sbjct: 217 CAGLLDVGLGQVIHGMAMKTGLMSDVFVGNALIAMYGKCGFVREAVKVLECMPDRNLVSW 276
Query: 274 NSLICGFSENELWLEAFGAFRRLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMA 333
NS+ICGF+EN E++ FR++LES + LIPDVATIVT+LPVC+GEG+V++GMVIHG+A
Sbjct: 277 NSMICGFAENGFSQESYDMFRKILESEEELIPDVATIVTVLPVCAGEGEVNVGMVIHGLA 336
Query: 334 LKLGLVRELMVCNALVDMYSKCGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETF 393
++LGL +ELMV NAL+DMYSKCGYL++A +LF + NKNVVSWNSM+G SREG V TF
Sbjct: 337 VRLGLSQELMVNNALIDMYSKCGYLNEAHILFIRSNNKNVVSWNSMIGGISREGDVCRTF 396
Query: 394 ELLRKMWMEEEMIKVNEVTILNLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIA 453
+LLRKM ME++ KVNEVTILN+LPAC+EE+EL L+ELHGYS+RH FQYDE + NAF+A
Sbjct: 397 DLLRKMQMEQDKTKVNEVTILNVLPACLEESELPCLKELHGYSIRHGFQYDELVANAFVA 456
Query: 454 AYAKCGSLSSAEHIFSGMNTKSVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFS 513
AYAKCG LSSAEH+F G+ TK+V++WNA+IGG+A NGDP+KAF+ YF+M SG+ D FS
Sbjct: 457 AYAKCGLLSSAEHVFYGIETKTVNTWNALIGGHAKNGDPKKAFELYFQMASSGFDPDSFS 516
Query: 514 ISTLLLACARLRHLQYGKEMHGFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIK 573
I +LLLAC+ ++ L GKE+HGFVLR GLE DSF+ +SLLSLYIHC + AR F+R++
Sbjct: 517 IGSLLLACSYVKCLNPGKELHGFVLRKGLETDSFIGISLLSLYIHCREVLSARMLFDRME 576
Query: 574 VKNSVCWNAMLSGYSQNELPNEAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGRE 633
K V WNAM++GYSQN LP+EA+ LFR+M+S+G++P EIA+ SV GACS+LSAL LG+E
Sbjct: 577 DKILVSWNAMIAGYSQNGLPDEALDLFRKMISDGVQPYEIAIMSVFGACSQLSALRLGKE 636
Query: 634 VHCFVLKNRLIEDNFVACSLMDMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQ 693
+HCF LK L EDNFV CSL+DMYAKSGC+ +S R+F+ L +K+ ASWNV+ITG+G+HG
Sbjct: 637 MHCFALKAHLTEDNFVGCSLIDMYAKSGCIEQSHRVFDSLKKKDEASWNVIITGYGIHGH 696
Query: 694 GNKAVELFEEMQRLNKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYA 753
GNKA+ELFE+MQR ++PD FT +G+L AC HA LV+EGL Y QM+ LY +EP+LEHYA
Sbjct: 697 GNKAIELFEKMQRSGQKPDEFTLIGILMACSHAELVTEGLKYFGQMKVLYGIEPKLEHYA 756
Query: 754 CVIDMLGRAGRLNEALNLINEMPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEAN 813
CV+DMLGRAG+L+EAL LI+EMPEEPDA+IWSSLLSS R YGDL MG + AE+LL LE
Sbjct: 757 CVVDMLGRAGQLDEALKLIHEMPEEPDARIWSSLLSSCRIYGDLQMGVQIAEELLELEPE 816
Query: 814 KADSYILLSNLYATAGKWDLVRMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSIL 873
KA++Y+LLSNLYA +GKWD VR VR++MK+ LQK AG SWIE+GGK YSF+ G++L +
Sbjct: 817 KAENYVLLSNLYAGSGKWDDVRRVRKRMKENGLQKDAGRSWIEIGGKVYSFVVGDEL-LS 876
Query: 874 DSNEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEG 933
+S EIR MW RLE++I EIGY P++ VLHEL EEEKI+ L+GHSEKLA+SFG L T +G
Sbjct: 877 ESKEIRNMWKRLEEKISEIGYKPNTDSVLHELSEEEKIEALRGHSEKLALSFGLLKTTKG 936
Query: 934 TTLRICKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
TLRICKNLRIC DCHNAAK ISK REI++RDNKRFHHFK+G CSCGDYW
Sbjct: 937 ATLRICKNLRICVDCHNAAKLISKVVAREIVVRDNKRFHHFKDGFCSCGDYW 986
BLAST of Carg17887 vs. TrEMBL
Match:
tr|A0A251PBR1|A0A251PBR1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G211400 PE=4 SV=1)
HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 613/990 (61.92%), Postives = 779/990 (78.69%), Query Frame = 0
Query: 1 MAVVAPPFSCR-YRAPTTIRKLTSSSILKCSLLLISSPKSSFSVS---AQTHQAQSI--- 60
MA VAPP SC P T K SL I +PK + S+S QTHQ + +
Sbjct: 1 MAFVAPPLSCHPLPTPNT----------KHSLHSIFTPKPNASLSFCATQTHQREPLTST 60
Query: 61 -KLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKD 120
+S+ +LL+EI LC++G+L+ A LQ N L Q+K+AMG LLQ CG+ KD
Sbjct: 61 HNSLSQPNLLQEINNLCDSGNLSEALTLLQAD-SRNAISSLQQKKDAMGALLQACGRHKD 120
Query: 121 VEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVS 180
VE GR++ +++ S+QFS DFVLNTR+ITMYS+CG PSD+RLVF+ LQ +NLFQWNALVS
Sbjct: 121 VETGRKVHDLVSASTQFSNDFVLNTRIITMYSVCGSPSDSRLVFNGLQRKNLFQWNALVS 180
Query: 181 GYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFI 240
GY RNELY +AI FIELISVT F+PDNFT PCLIKAC G DV LGQ +HGMAVKMG +
Sbjct: 181 GYARNELYGDAIDVFIELISVTVFKPDNFTFPCLIKACGGLLDVGLGQVIHGMAVKMGLM 240
Query: 241 MDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRL 300
D+FVGNA+I++YGKCG +++A++VFD MPERNL+SWNS+ICG+SEN + + R++
Sbjct: 241 SDVFVGNALIAMYGKCGSIEDAVRVFDLMPERNLVSWNSMICGYSENGFSQQCYSLLRKI 300
Query: 301 LESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCG 360
LE + L+PDVAT+VT+LP+C+G+G+V++GMVIHG+A+KLGL +ELMV NAL+DMYSKCG
Sbjct: 301 LEGEESLVPDVATLVTILPLCAGKGEVNIGMVIHGVAVKLGLNQELMVNNALMDMYSKCG 360
Query: 361 YLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNL 420
YL++A +LF K + KNVVSWNS++G YSREG V+ TF+L +KM MEEE +KVNEVT+LN+
Sbjct: 361 YLAEAQVLFDKNDKKNVVSWNSIIGGYSREGDVWGTFDLFQKMQMEEEKVKVNEVTVLNV 420
Query: 421 LPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSV 480
LPAC+EE+ELLSL++LHGYS RH F YDE + NAF++AYAKCGSL+SAE +F G+ TK+V
Sbjct: 421 LPACLEESELLSLKKLHGYSFRHGFLYDELVANAFVSAYAKCGSLTSAERVFHGIETKTV 480
Query: 481 SSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMHGF 540
SSWNA+IGGYA NGDP+KA D Y +M+ SG D FSI +LLLACA L+ LQ+G+++HGF
Sbjct: 481 SSWNAVIGGYAQNGDPKKALDLYLQMKYSGLDPDWFSIGSLLLACAHLKLLQHGRQIHGF 540
Query: 541 VLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEA 600
VLR+G E DSF+ +SLLS YI C K AR F+R++ K+ V WNAM++GY+Q+ L +EA
Sbjct: 541 VLRDGSETDSFIGISLLSFYIQCGKLSSARVLFDRMEAKSRVSWNAMITGYTQSGLADEA 600
Query: 601 ISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLMDM 660
++LFRQMLS+ P EI SV ACS+LS+L LG+E+HCF LK RL ED FV CSL+DM
Sbjct: 601 LNLFRQMLSDETLPCEIGTMSVFEACSQLSSLRLGKELHCFALKARLTEDLFVGCSLIDM 660
Query: 661 YAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTF 720
YAKSGC+ S R+F+ L +K+ SWNV+I G+GVHG G+KA+ELF EM L ++PD FTF
Sbjct: 661 YAKSGCIEESHRVFDWLVKKDVPSWNVIIAGYGVHGHGSKALELFGEMVSLGQKPDGFTF 720
Query: 721 LGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMP 780
+GVL AC HAGLV EGL Y QMQSLY ++P+LEHYACV+DMLGRAG+L EALNLI+EMP
Sbjct: 721 IGVLTACSHAGLVKEGLKYFNQMQSLYGIDPKLEHYACVVDMLGRAGQLEEALNLIHEMP 780
Query: 781 EEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLVRM 840
EEPD ++WSSLLSS R + +L MG+K +EKL+ LE KA+SY+LLSNLYA +GKWD VR
Sbjct: 781 EEPDTRMWSSLLSSCRLHNNLDMGQKISEKLIELEPEKAESYVLLSNLYAASGKWDDVRR 840
Query: 841 VRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTP 900
VRQ+MK++ LQK AG SWI++GG+ YSF+AG D S+ +S EI+KMW+RLE++I + GY P
Sbjct: 841 VRQRMKEMGLQKDAGHSWIDVGGQVYSFVAG-DTSLPESGEIKKMWSRLEEKISKFGYRP 900
Query: 901 DSSCVLHEL-EEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFI 960
++ VLHEL EEEEKI+IL+ HSEKLAISFG L +G TLRICKNLRIC DCHNAAK I
Sbjct: 901 NTGSVLHELEEEEEKIEILRRHSEKLAISFGLLKMSKGATLRICKNLRICVDCHNAAKLI 960
Query: 961 SKAAKREIIIRDNKRFHHFKNGICSCGDYW 982
SK +REI++RDNKRFHHFK+G+CSCGDYW
Sbjct: 961 SKVVEREIVVRDNKRFHHFKHGLCSCGDYW 978
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022921451.1 | 0.0e+00 | 99.29 | pentatricopeptide repeat-containing protein At1g18485 [Cucurbita moschata] | [more] |
XP_022987922.1 | 0.0e+00 | 96.94 | pentatricopeptide repeat-containing protein At1g18485 [Cucurbita maxima] | [more] |
XP_023516931.1 | 0.0e+00 | 96.33 | pentatricopeptide repeat-containing protein At1g18485 [Cucurbita pepo subsp. pep... | [more] |
XP_008453326.1 | 0.0e+00 | 81.97 | PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo] | [more] |
XP_004138328.1 | 0.0e+00 | 81.63 | PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativu... | [more] |
Match Name | E-value | Identity | Description | |
AT1G18485.1 | 1.2e-295 | 52.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G57430.1 | 1.6e-178 | 39.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 9.5e-160 | 36.42 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 9.2e-155 | 37.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G03580.1 | 1.1e-152 | 34.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |