Carg17877 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCTTCCAGCAAGATATTGCTGATTTCCATGGCGATTCTCCTAGTCGTTGAGGCGCTAAACCTTAATGTGACTCGGATTCAGTTCTACATGCATGATATTGTGAGTGGTCCGAACGCCACCGGGATTCAAGTCGCCAGACGGCGGACGAACTACACGGGTTCGGACCCAATCGCCGCCATGTTTGGGTCTATTTTCATGATGGATTACCCGCTCACGGTGGCGCCCGGATTAGGGCTCGACGTTGATTGGGCGTGCTCAGGGGATTTATGTAATGTCGTCGCAACAAAAGGAGTTCAACCTTTTGATGACGCTAACCTTCGTAATGACCGGTGGACCGTACCACGGCAGCTCGTTCAGCGTCGTCGGCCGGAATCCCATCATGAACGAACTCCGGGAAATGCCAGTGGTCGGTGGGACGGGGATTTTCCGGCTTGTTCATGA ATGGCCGCTTCCAGCAAGATATTGCTGATTTCCATGGCGATTCTCCTAGTCGTTGAGGCGCTAAACCTTAATGTGACTCGGATTCAGTTCTACATGCATGATATTGTGAGTGGTCCGAACGCCACCGGGATTCAAGTCGCCAGACGGCGGACGAACTACACGGGTTCGGACCCAATCGCCGCCATGTTTGGGTCTATTTTCATGATGGATTACCCGCTCACGGTGGCGCCCGGATTAGGGCTCGACGTTGATTGGGCGTGCTCAGGGGATTTATGTAATGTCGTCGCAACAAAAGGAGTTCAACCTTTTGATGACGCTAACCTTCGTAATGACCGGTGGACCGTACCACGGCAGCTCGTTCAGCGTCGTCGGCCGGAATCCCATCATGAACGAACTCCGGGAAATGCCAGTGGTCGGTGGGACGGGGATTTTCCGGCTTGTTCATGA ATGGCCGCTTCCAGCAAGATATTGCTGATTTCCATGGCGATTCTCCTAGTCGTTGAGGCGCTAAACCTTAATGTGACTCGGATTCAGTTCTACATGCATGATATTGTGAGTGGTCCGAACGCCACCGGGATTCAAGTCGCCAGACGGCGGACGAACTACACGGGTTCGGACCCAATCGCCGCCATGTTTGGGTCTATTTTCATGATGGATTACCCGCTCACGGTGGCGCCCGGATTAGGGCTCGACGTTGATTGGGCGTGCTCAGGGGATTTATGTAATGTCGTCGCAACAAAAGGAGTTCAACCTTTTGATGACGCTAACCTTCGTAATGACCGGTGGACCGTACCACGGCAGCTCGTTCAGCGTCGTCGGCCGGAATCCCATCATGAACGAACTCCGGGAAATGCCAGTGGTCGGTGGGACGGGGATTTTCCGGCTTGTTCATGA MAASSKILLISMAILLVVEALNLNVTRIQFYMHDIVSGPNATGIQVARRRTNYTGSDPIAAMFGSIFMMDYPLTVAPGLGLDVDWACSGDLCNVVATKGVQPFDDANLRNDRWTVPRQLVQRRRPESHHERTPGNASGRWDGDFPACS
BLAST of Carg17877 vs. NCBI nr
Match: XP_022135557.1 (dirigent protein 22-like [Momordica charantia]) HSP 1 Score: 117.1 bits (292), Expect = 5.1e-23 Identity = 63/82 (76.83%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of Carg17877 vs. NCBI nr
Match: KGN63770.1 (hypothetical protein Csa_1G015640 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22 Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Carg17877 vs. NCBI nr
Match: XP_009339555.1 (PREDICTED: dirigent protein 23-like [Pyrus x bretschneideri]) HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Carg17877 vs. NCBI nr
Match: XP_018809852.1 (PREDICTED: dirigent protein 22-like [Juglans regia]) HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14 Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Carg17877 vs. NCBI nr
Match: XP_008393377.1 (PREDICTED: dirigent protein 23-like [Malus domestica]) HSP 1 Score: 88.2 bits (217), Expect = 2.6e-14 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Carg17877 vs. TAIR10
Match: AT4G38700.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 54.7 bits (130), Expect = 5.7e-08 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Carg17877 vs. TAIR10
Match: AT2G21110.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05 Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of Carg17877 vs. TAIR10
Match: AT2G21100.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 44.3 bits (103), Expect = 7.7e-05 Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of Carg17877 vs. TAIR10
Match: AT1G22900.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 21/55 (38.18%), Postives = 33/55 (60.00%), Query Frame = 0
BLAST of Carg17877 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 41.2 bits (95), Expect = 6.5e-04 Identity = 22/53 (41.51%), Postives = 30/53 (56.60%), Query Frame = 0
BLAST of Carg17877 vs. Swiss-Prot
Match: sp|F4JUF8|DIR15_ARATH (Dirigent protein 15 OS=Arabidopsis thaliana OX=3702 GN=DIR15 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Carg17877 vs. Swiss-Prot
Match: sp|Q9SKQ2|DIR4_ARATH (Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04 Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of Carg17877 vs. TrEMBL
Match: tr|A0A0A0LPF3|A0A0A0LPF3_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_1G015640 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22 Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Carg17877 vs. TrEMBL
Match: tr|A0A2I4DRT2|A0A2I4DRT2_9ROSI (Dirigent protein OS=Juglans regia OX=51240 GN=LOC108982846 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14 Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Carg17877 vs. TrEMBL
Match: tr|A0A2P4JBZ1|A0A2P4JBZ1_QUESU (Dirigent protein OS=Quercus suber OX=58331 GN=CFP56_62653 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.2e-14 Identity = 49/82 (59.76%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of Carg17877 vs. TrEMBL
Match: tr|A0A2N9J8S7|A0A2N9J8S7_FAGSY (Dirigent protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60741 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of Carg17877 vs. TrEMBL
Match: tr|B9RLI8|B9RLI8_RICCO (Dirigent protein OS=Ricinus communis OX=3988 GN=RCOM_1467510 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |