Carg17875 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17875
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	squamosa promoter-binding-like protein 6
Location	Cucurbita_argyrosperma_scaffold_114 : 48463 .. 51591 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGTAATTTGGTTGCTGTAATGGAGTCTTGGAGCTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAACTGAATTCGCCTACAAGTTCTCTTGCAAGGAACAAAGATTCTTTGTTGGGTTGGGAATTCAAACACCCCTGCAACTTTGGTAGCACCATGTTACCAACAGGTCAACATGTTGATAATCAAGGATTTGGGGAATTCATATTCCCTGAAATGATAGGGAAACAATTAGCAGACAATTCAGTTTGTGACATTTTGAGTAGCAAGGTCGTTGGTGGAAGATATCTAAATCCATCCAATGCATATCTGGGGGAGGATGAATCCACATCAAAGCTCTCTGGCTCTGTTGTGGACTCAACCAGCCGAGATTCTTCATTCATTGATTTAAAGCTAGGGAGATTTGCTGACCATAGGGAGGCTCATGGCTACAAATTCTTTAAGGGAGCCCCCATTTTGGCATCATCTGAGTCGTCGATGCCTTCGAAACGAGTTCGAGCTTCCGGGTTGAATTCTCAAACTTATTTCTGCCAGGTTTATGGGTGTAACAAGGATCTTAGCTCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGCATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTCGTTAATTTTCATCACTCATATTAGTTTTGGTTGATCTTTTAAATGTACGTTTAGATCGTTCACACTGGAGATCCACATGGATTCACGAAAAAATGATATTAATGCTGATTAACATCATCATTAACTGTATACTCGTGCTGCCCCGAAGCTCCATCGACAGAGCAAATCATTAGTATTATTGCTGCTCTAATATGGTCTTGCTTTTGACTTCCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCATAACGAACGTCGGAGAAAGCCTCAGGTGGCTATCAATTCTGGCAGGGCTGGAAGGTTTCTCCAGTCATATAATGGTACTAAATTTGTTTCATGTTCACAAACTTACGTACGGCATCGATATACAGCTTTCGAATTCACGATTTTTGTTTTAGTTTGTGTTTCAGTCATCAATTTTGTAAACTCTACAGGTAGCAGGCTTCAAGGAACGGCATTAACAGCAACATCCTTCATCTGCCAAGGGATATTACCAAATGGTATTTTGAATACAGAGAAATATGGAGCAAGTGATTGGTGTAGAACTGTGAAAATTGAAGACAAGAATGAATCTATGCCTTTGTCTGCTGTTCATGCACCTAGTGCCCATTTGCATTCGAAATCTCTCTTCTCTCCGTACGATATCGATACCCAAGTTCCCCCTTTCCATGACAACGAACCGAATCCAAGCGCCACAAATATGTTCAAGGAGAACAGTAATCAATATCCTCTTAGTGTAGGAGGCGTGAATTCGAGTTCTCGTTCATACTTTCACAACCCCTCGTTAGACAGTGAATACTTCAGCGTTTATAGTGCAGCATCAACCGATCGACTATCAGGATTATCAGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCAGGGATTCCCATTGGTCGTCCTATGGTCTTGCTTGATGGCCAAAATCATTACAGTATGAGTCAACTTTCTGAAAAGCTCATGGGAGTAAGCTCCCAGGTTTCTGTGAATGGCGTGTCGAATAAATTCGATTCGTCAGGGTTGAATGCTTCGGAAGGTTGTACTCTTGGTCCCATATCGACACCTGAAACAAGTGATGCTGTGAACTTAGAAATTACGAATCGGATTTTCCATGAATCGAATTTGGCAGATCCGTGTGAAGGTGGCCCGACCATTGACTTGTTGCAGCTTTCATCACAACTCCATCGTGTCGAGCACCAGAGACAAGCTATGCAGGTGAAGCAAGAAAGTAATGCTTTCTGCTGCCTCCGGATTACTTAAATTTTATGAATAACAGGTACCTAAAAAATGTGTTTCTTGTCACTGATTTACTATATTCCTGAAATATGTACTTGAATTGTGATGGCTTTTGAGAAGCATTTGGTTTTAGCTGTTTAAATTTGCTTCTTAACCTGCTCGAGTACATCGTTCCCTTTCTCCAATCTATGTGAGACCCTCCAATCCACCCCCCTACGGGGCACACCGCCTCGTGTCCACCCCACTTCGGGGCTCAGCCTCCTCGCTGGCACATCGCCTGGTGTCAGACTCTGATACCATTTGTAACAGTCTAAGTCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCCTTCAAGGTTTTTTAAATGCGTCTTTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCGATCTGGGATCTCACAATGTCTCTTAGGGTTTGTGATGACATTACCTTCACTAGAAGAGATACTGACAACCCTTGCACCATCTTTACCATCTTTCGGCCATGATATCGGTCTTGTCTTTGGTGTATTAATTTTCAAGTTTCTTAGATAGGGTTAGTGAGTATACGGTCATTTTGTGTAATGTCGATTCCATCGTACTAAATGATGCATGGAATGCATCTTCGAAGTCTGGACTTGTCGTGTTTGCTAGGCGAAGCCCAATGCTCGGGAAGCTGAACGACCATACTTTTCCTTTTCCTTTCTACACTTAAACAATATGAACTGTGAATGAACAATGTGTTATTGCAACTCTGATAATTCTGTTATGTCATAAATGATGGCATATATTCAGATCCTTGAGCAGCATCGACTCGGACGGTTTTGACAACTGATTCGTATCGGAAAAGGCGACAGGACAGGACAAAGCGTGTGCTGAGTGTGAAGAATGCAGTGGATTTTGATGCACTGCTGCTGGGAGTGCTGTTGGTAGGCTGAGGAGAAGTTCAAAATAAAGTAGCATGATTTGTTCTTTCTTATAAGAACTAACATTGATATGTTGGTGCAATTCTTGGACCATTCTTGAAGTATTCTATTATTGACTTGTAAACTTTTATATGTAGCTTTCAGATCTGGGATTTCTTGTTTGATGTAGTAGTACCTTCTGATGATTTTTTTTTTT

mRNA sequence

TGGGTAATTTGGTTGCTGTAATGGAGTCTTGGAGCTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAACTGAATTCGCCTACAAGTTCTCTTGCAAGGAACAAAGATTCTTTGTTGGGTTGGGAATTCAAACACCCCTGCAACTTTGGTAGCACCATGTTACCAACAGGTCAACATGTTGATAATCAAGGATTTGGGGAATTCATATTCCCTGAAATGATAGGGAAACAATTAGCAGACAATTCAGTTTGTGACATTTTGAGTAGCAAGGTCGTTGGTGGAAGATATCTAAATCCATCCAATGCATATCTGGGGGAGGATGAATCCACATCAAAGCTCTCTGGCTCTGTTGTGGACTCAACCAGCCGAGATTCTTCATTCATTGATTTAAAGCTAGGGAGATTTGCTGACCATAGGGAGGCTCATGGCTACAAATTCTTTAAGGGAGCCCCCATTTTGGCATCATCTGAGTCGTCGATGCCTTCGAAACGAGTTCGAGCTTCCGGGTTGAATTCTCAAACTTATTTCTGCCAGGTTTATGGGTGTAACAAGGATCTTAGCTCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGCATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCATAACGAACGTCGGAGAAAGCCTCAGGTGGCTATCAATTCTGGCAGGGCTGGAAGGTTTCTCCAGTCATATAATGGTAGCAGGCTTCAAGGAACGGCATTAACAGCAACATCCTTCATCTGCCAAGGGATATTACCAAATGGTATTTTGAATACAGAGAAATATGGAGCAAGTGATTGGTGTAGAACTGTGAAAATTGAAGACAAGAATGAATCTATGCCTTTGTCTGCTGTTCATGCACCTAGTGCCCATTTGCATTCGAAATCTCTCTTCTCTCCGTACGATATCGATACCCAAGTTCCCCCTTTCCATGACAACGAACCGAATCCAAGCGCCACAAATATGTTCAAGGAGAACAGTAATCAATATCCTCTTAGTGTAGGAGGCGTGAATTCGAGTTCTCGTTCATACTTTCACAACCCCTCGTTAGACAGTGAATACTTCAGCGTTTATAGTGCAGCATCAACCGATCGACTATCAGGATTATCAGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCAGGGATTCCCATTGGTCGTCCTATGGTCTTGCTTGATGGCCAAAATCATTACAGTATGAGTCAACTTTCTGAAAAGCTCATGGGAGTAAGCTCCCAGGTTTCTGTGAATGGCGTGTCGAATAAATTCGATTCGTCAGGGTTGAATGCTTCGGAAGGTTGTACTCTTGGTCCCATATCGACACCTGAAACAAGTGATGCTGTGAACTTAGAAATTACGAATCGGATTTTCCATGAATCGAATTTGGCAGATCCGTGTGAAGGTGGCCCGACCATTGACTTGTTGCAGCTTTCATCACAACTCCATCGTGTCGAGCACCAGAGACAAGCTATGCAGGTGAAGCAAGAAAGTAATGCTTTCTGCTGCCTCCGGATTACTTAAATTTTATGAATAACAGATCCTTGAGCAGCATCGACTCGGACGGTTTTGACAACTGATTCGTATCGGAAAAGGCGACAGGACAGGACAAAGCGTGTGCTGAGTGTGAAGAATGCAGTGGATTTTGATGCACTGCTGCTGGGAGTGCTGTTGGTAGGCTGAGGAGAAGTTCAAAATAAAGTAGCATGATTTGTTCTTTCTTATAAGAACTAACATTGATATGTTGGTGCAATTCTTGGACCATTCTTGAAGTATTCTATTATTGACTTGTAAACTTTTATATGTAGCTTTCAGATCTGGGATTTCTTGTTTGATGTAGTAGTACCTTCTGATGATTTTTTTTTTT

Coding sequence (CDS)

ATGGAGTCTTGGAGCTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAACTGAATTCGCCTACAAGTTCTCTTGCAAGGAACAAAGATTCTTTGTTGGGTTGGGAATTCAAACACCCCTGCAACTTTGGTAGCACCATGTTACCAACAGGTCAACATGTTGATAATCAAGGATTTGGGGAATTCATATTCCCTGAAATGATAGGGAAACAATTAGCAGACAATTCAGTTTGTGACATTTTGAGTAGCAAGGTCGTTGGTGGAAGATATCTAAATCCATCCAATGCATATCTGGGGGAGGATGAATCCACATCAAAGCTCTCTGGCTCTGTTGTGGACTCAACCAGCCGAGATTCTTCATTCATTGATTTAAAGCTAGGGAGATTTGCTGACCATAGGGAGGCTCATGGCTACAAATTCTTTAAGGGAGCCCCCATTTTGGCATCATCTGAGTCGTCGATGCCTTCGAAACGAGTTCGAGCTTCCGGGTTGAATTCTCAAACTTATTTCTGCCAGGTTTATGGGTGTAACAAGGATCTTAGCTCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGCATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCATAACGAACGTCGGAGAAAGCCTCAGGTGGCTATCAATTCTGGCAGGGCTGGAAGGTTTCTCCAGTCATATAATGGTAGCAGGCTTCAAGGAACGGCATTAACAGCAACATCCTTCATCTGCCAAGGGATATTACCAAATGGTATTTTGAATACAGAGAAATATGGAGCAAGTGATTGGTGTAGAACTGTGAAAATTGAAGACAAGAATGAATCTATGCCTTTGTCTGCTGTTCATGCACCTAGTGCCCATTTGCATTCGAAATCTCTCTTCTCTCCGTACGATATCGATACCCAAGTTCCCCCTTTCCATGACAACGAACCGAATCCAAGCGCCACAAATATGTTCAAGGAGAACAGTAATCAATATCCTCTTAGTGTAGGAGGCGTGAATTCGAGTTCTCGTTCATACTTTCACAACCCCTCGTTAGACAGTGAATACTTCAGCGTTTATAGTGCAGCATCAACCGATCGACTATCAGGATTATCAGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCAGGGATTCCCATTGGTCGTCCTATGGTCTTGCTTGATGGCCAAAATCATTACAGTATGAGTCAACTTTCTGAAAAGCTCATGGGAGTAAGCTCCCAGGTTTCTGTGAATGGCGTGTCGAATAAATTCGATTCGTCAGGGTTGAATGCTTCGGAAGGTTGTACTCTTGGTCCCATATCGACACCTGAAACAAGTGATGCTGTGAACTTAGAAATTACGAATCGGATTTTCCATGAATCGAATTTGGCAGATCCGTGTGAAGGTGGCCCGACCATTGACTTGTTGCAGCTTTCATCACAACTCCATCGTGTCGAGCACCAGAGACAAGCTATGCAGGTGAAGCAAGAAAGTAATGCTTTCTGCTGCCTCCGGATTACTTAA

Protein sequence

MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFGEFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPSNAYLGEDESTSKLSGSVVDSTSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKENSNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTLGPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAFCCLRIT

Homology

[Close]

BLAST of Carg17875 vs. NCBI nr
Match: XP_022921956.1 (squamosa promoter-binding-like protein 6 [Cucurbita moschata] >XP_022921957.1 squamosa promoter-binding-like protein 6 [Cucurbita moschata])

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 543/546 (99.45%), Postives = 543/546 (99.45%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG
Sbjct: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPSNAYLGEDESTSKLSGSVVDSTSRDSS 120
           EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPSNAYLGEDESTSKLSGSVVDSTSRDSS
Sbjct: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPSNAYLGEDESTSKLSGSVVDSTSRDSS 120

Query: 121 FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL 180
           FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL
Sbjct: 121 FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL 180

Query: 181 SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 240
           SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE
Sbjct: 181 SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 240

Query: 241 RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASDWCRT 300
           RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASDWCRT
Sbjct: 241 RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASDWCRT 300

Query: 301 VKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKENSNQY 360
           VKIEDKNE MPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKENSNQY
Sbjct: 301 VKIEDKNEYMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKENSNQY 360

Query: 361 PLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS 420
           PLSVGGVNSSSRSYFHNPSL SEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS
Sbjct: 361 PLSVGGVNSSSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS 420

Query: 421 SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTLGPIS 480
           SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSS VSVNGVSNKFDSSGLNASEGCTLGPIS
Sbjct: 421 SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSHVSVNGVSNKFDSSGLNASEGCTLGPIS 480

Query: 481 TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF 540
           TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF
Sbjct: 481 TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF 540

Query: 541 CCLRIT 547
           CCLRIT
Sbjct: 541 CCLRIT 546

[Close]

BLAST of Carg17875 vs. NCBI nr
Match: XP_023515466.1 (squamosa promoter-binding-like protein 6 [Cucurbita pepo subsp. pepo] >XP_023515467.1 squamosa promoter-binding-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1073.5 bits (2775), Expect = 1.7e-310
Identity = 533/546 (97.62%), Postives = 538/546 (98.53%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSL RNKDSLLGWEFKHPCNFGSTMLPTGQHV+NQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLGRNKDSLLGWEFKHPCNFGSTMLPTGQHVENQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPSNAYLGEDESTSKLSGSVVDSTSRDSS 120
           EFIFPEMIGKQLADNSVCDILSSKVVGGRYL PSNAYLGEDESTSKLSGSVVDSTSRDSS
Sbjct: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLTPSNAYLGEDESTSKLSGSVVDSTSRDSS 120

Query: 121 FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL 180
           FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL
Sbjct: 121 FIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNKDL 180

Query: 181 SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 240
           SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE
Sbjct: 181 SSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 240

Query: 241 RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASDWCRT 300
           RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILN EKYG SDWCRT
Sbjct: 241 RRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNPEKYGTSDWCRT 300

Query: 301 VKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKENSNQY 360
           VKIED NE MPL+AVHAP+AHLHSKSLF PYDIDTQVPPFHDNEPNPSATNMFK+NSNQY
Sbjct: 301 VKIEDNNEYMPLAAVHAPTAHLHSKSLFDPYDIDTQVPPFHDNEPNPSATNMFKDNSNQY 360

Query: 361 PLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS 420
           PLSVGGVNSSSRSYFHNPSL SEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS
Sbjct: 361 PLSVGGVNSSSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNSSTHS 420

Query: 421 SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTLGPIS 480
           SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTLGPIS
Sbjct: 421 SGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTLGPIS 480

Query: 481 TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF 540
           TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF
Sbjct: 481 TPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQESNAF 540

Query: 541 CCLRIT 547
           CCLRIT
Sbjct: 541 CCLRIT 546

[Close]

BLAST of Carg17875 vs. NCBI nr
Match: XP_022987111.1 (squamosa promoter-binding-like protein 6 [Cucurbita maxima] >XP_022987112.1 squamosa promoter-binding-like protein 6 [Cucurbita maxima])

HSP 1 Score: 1062.8 bits (2747), Expect = 4.0e-307
Identity = 532/550 (96.73%), Postives = 538/550 (97.82%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFK+PCNFGSTMLPT QHV+NQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGSTMLPTAQHVENQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDSTS 120
           EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP    SNAYLGEDESTSKLSGSVVDSTS
Sbjct: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPAMNSSNAYLGEDESTSKLSGSVVDSTS 120

Query: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMP+KRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPTKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASD 300
           GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILN EKYGASD
Sbjct: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNPEKYGASD 300

Query: 301 WCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKEN 360
           WCRTVKIEDKNE MPLSAVHAPSAHLHSKSLFSPYDID QVPPFHDNEPNPSATNMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHAPSAHLHSKSLFSPYDIDAQVPPFHDNEPNPSATNMFKEN 360

Query: 361 SNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420
           SNQYPL  GGVNSS RSYFHNPSL SEYFSVYSAASTDRLSGLSDSGCALSLLSSQT+NS
Sbjct: 361 SNQYPLIAGGVNSSPRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTRNS 420

Query: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTL 480
           STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKF+SSGLNASEGCTL
Sbjct: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFNSSGLNASEGCTL 480

Query: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540
           GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE
Sbjct: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 547
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of Carg17875 vs. NCBI nr
Match: XP_004138332.1 (PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis sativus] >XP_011648639.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis sativus] >XP_011648643.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis sativus] >KGN63774.1 hypothetical protein Csa_1G015680 [Cucumis sativus])

HSP 1 Score: 1006.9 bits (2602), Expect = 2.6e-290
Identity = 504/550 (91.64%), Postives = 523/550 (95.09%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFK+PC+FGSTMLPT Q VDNQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQVDNQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDSTS 120
           E +FPEMIGKQL DNSVCDILSSKVVGGR+LNP    S A+LGEDESTSKLS S+VDS+S
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFAD R+AHGYKFFKGAPIL+SSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASD 300
           GHNERRRKPQVAINSGR GRFLQSYNGSRLQGTALTATSFICQ ILPNG+L+ EKYG SD
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKEN 360
           WCRTVKIEDKNE MPLSAVH PS HLHSKSLFSPYDI+TQVPPFHDN PN SATN+FKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNIFKEN 360

Query: 361 SNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420
           SNQYPLSVGGVNS+SRSYFHNPSL SEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTL 480
           STHSSGIPIGRP+VLLDGQNHYSMSQLSEKLMGVSSQVSV+GVSNKF+SSGLN SEGCTL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLNTSEGCTL 480

Query: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540
           GPISTPETSDAVN EI+NRIFH SNLADP EGGPTIDLLQLSSQL RVEHQRQAMQVKQE
Sbjct: 481 GPISTPETSDAVNFEISNRIFHGSNLADPGEGGPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 547
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of Carg17875 vs. NCBI nr
Match: XP_008453304.1 (PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453305.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453306.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo])

HSP 1 Score: 993.0 bits (2566), Expect = 3.9e-286
Identity = 499/550 (90.73%), Postives = 516/550 (93.82%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKHPC+F STMLPT Q VDNQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPTSQQVDNQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDSTS 120
           E +FPEMIGKQL DNSVCDILSSKVVGGR+LNP    S A+LGEDESTSKLS S+VDS+S
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RD  FIDLKLGRFAD R+ HGYKFFKGAPIL+SSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASD 300
           GHNERRRKPQVAINSGR GRFLQSYNGSRLQGTALTATSFICQ ILPNG+L+ EKYG SD
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKEN 360
           WCRTVKIEDKNE MPLSAVH PS HLHSKSLFSPYDI+TQVPPFHDN PN SATNMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420
           SNQYPLSVGGVNS+SRSYFHNPSL SEYF+VYSAASTDRLSGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTL 480
           STHSSGIPIGRP+VLLDGQNHYSMSQLSEKLMGVSSQVSV+GVSNKF SSGLN SEGCTL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLNTSEGCTL 480

Query: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540
           GPI TPETSDAVN EI+NRIFH SNLADP EG PTIDLLQLSSQL RVEHQRQAMQVKQE
Sbjct: 481 GPIPTPETSDAVNFEISNRIFHGSNLADPGEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 547
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 549

[Close]

BLAST of Carg17875 vs. TAIR10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-42
Identity = 164/499 (32.87%), Postives = 219/499 (43.89%), Query Frame = 0


Query: 46  TMLPTGQHVDNQGFGEFIFPEMIGKQLADNSVCDILSSKVVG---GRYLNPSNAYLGEDE 105
           T+LP      N+ F +         +L++N   D+L S + G   G         + E+E
Sbjct: 16  TLLPCDTFAKNRRFEQ---------RLSNND--DVLISDMAGNSNGFSAVSITKVVPEEE 75

Query: 106 STSKLSGSVVDSTSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRAS 165
               +S S   S S++ + ID KL  F D                +S   ++PSK+ RAS
Sbjct: 76  DEENISSSSKFS-SQELNRIDFKLRSFLD--------LGNDDDDTSSRGFALPSKKSRAS 135

Query: 166 GLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 225
            L SQ   CQVYGC+KDLSSSKDYHKRH+VCE HSKT+ VIVNG+EQRFCQQCSRFH L+
Sbjct: 136 NLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLS 195

Query: 226 EFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGIL 285
           EFDDGKRSCR+RLAGHNERRRKP      G+  + L+            T+   +    L
Sbjct: 196 EFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLR------------TSQDVVGNKFL 255

Query: 286 PN-GILNTEKYGASDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFH 345
            N  ++  E +  S   R +  +D   S  +S    P+  +                 F 
Sbjct: 256 ENSSLVLPESFPGSLLYRVIDEDDHRTSRLVSFKDEPTCSM-----------------FP 315

Query: 346 DNEPNPSATNMFKENSNQYPLSVGGVNSSSRSYFHNPSL-DSEYFSVYSAASTDRLSGLS 405
            NE N                       SSR+Y   P++  +E  S++    T      S
Sbjct: 316 TNEQN-----------------------SSRTYESKPAIYSTEVSSIWDLHET----AAS 375

Query: 406 DSGCALSLLSSQTQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVS 465
            S  ALSLLS+Q+Q    H S  P     +    QN    S      M     +      
Sbjct: 376 RSTRALSLLSAQSQQ---HLSKFPNTTFSITQPNQNLNHSSSTDYHQMEQPLWID----P 398

Query: 466 NKFDSSGLNASEGCTLGPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQ 525
            K +S+G ++ +G                                 +G  T+DLLQLSS 
Sbjct: 436 GKTNSAGSSSCKG---------------------------------KGTSTVDLLQLSSH 398

Query: 526 LHRVEHQRQ-AMQVKQESN 539
           L R+E QR     VKQE N
Sbjct: 496 LQRIEQQRNYTGDVKQEYN 398

[Close]

BLAST of Carg17875 vs. TAIR10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 142.5 bits (358), Expect = 7.6e-34
Identity = 86/189 (45.50%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 94  SNAYLG---EDESTSKLSGSVV---DSTSRDSSFIDLKLGR--------FADHREAHGYK 153
           S+ YL    ++   S + GS+     S S+     DLKLGR        F D  +     
Sbjct: 8   SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLS 67

Query: 154 FFKGAPILASSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHS 213
            +K + +     S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHS
Sbjct: 68  KWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHS 127

Query: 214 KTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRF 267
           KT  V +NG +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F
Sbjct: 128 KTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANF 187

[Close]

BLAST of Carg17875 vs. TAIR10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 142.5 bits (358), Expect = 7.6e-34
Identity = 86/189 (45.50%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 94  SNAYLG---EDESTSKLSGSVV---DSTSRDSSFIDLKLGR--------FADHREAHGYK 153
           S+ YL    ++   S + GS+     S S+     DLKLGR        F D  +     
Sbjct: 8   SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLS 67

Query: 154 FFKGAPILASSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHS 213
            +K + +     S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHS
Sbjct: 68  KWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHS 127

Query: 214 KTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRF 267
           KT  V +NG +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F
Sbjct: 128 KTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANF 187

[Close]

BLAST of Carg17875 vs. TAIR10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-32
Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 122 IDLKLGR---FADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGCNK 181
           + LKLG+   F D  E    K   G P+  +S S  P K+ ++     QT  CQV GCN 
Sbjct: 118 LGLKLGKRTYFEDFWEVENAKGL-GLPVTLASSSVSPVKKSKSIPQRLQTPHCQVEGCNL 177

Query: 182 DLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGH 241
           DLSS+KDYH++H++CE HSK  KV+V+G+E+RFCQQCSRFH L+EFD+ KRSCR+RL+ H
Sbjct: 178 DLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDH 237

Query: 242 NERRRKPQVAINSGR 254
           N RRRKP    N GR
Sbjct: 238 NARRRKP----NPGR 247

[Close]

BLAST of Carg17875 vs. TAIR10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10)

HSP 1 Score: 129.4 bits (324), Expect = 6.7e-30
Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 152 SSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRF 211
           S +  K+ ++ G + Q   CQ+ GC  DLSSSKDYH++H+VCE HSK  KV+V+G+E+RF
Sbjct: 157 SVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRF 216

Query: 212 CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 247
           CQQCSRFH ++EFD+ KRSCRKRL+ HN RRRKPQ
Sbjct: 217 CQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ 251

[Close]

BLAST of Carg17875 vs. Swiss-Prot
Match: sp|Q94JW8|SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6 PE=1 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 2.1e-41
Identity = 164/499 (32.87%), Postives = 219/499 (43.89%), Query Frame = 0


Query: 46  TMLPTGQHVDNQGFGEFIFPEMIGKQLADNSVCDILSSKVVG---GRYLNPSNAYLGEDE 105
           T+LP      N+ F +         +L++N   D+L S + G   G         + E+E
Sbjct: 16  TLLPCDTFAKNRRFEQ---------RLSNND--DVLISDMAGNSNGFSAVSITKVVPEEE 75

Query: 106 STSKLSGSVVDSTSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRAS 165
               +S S   S S++ + ID KL  F D                +S   ++PSK+ RAS
Sbjct: 76  DEENISSSSKFS-SQELNRIDFKLRSFLD--------LGNDDDDTSSRGFALPSKKSRAS 135

Query: 166 GLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 225
            L SQ   CQVYGC+KDLSSSKDYHKRH+VCE HSKT+ VIVNG+EQRFCQQCSRFH L+
Sbjct: 136 NLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLS 195

Query: 226 EFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGIL 285
           EFDDGKRSCR+RLAGHNERRRKP      G+  + L+            T+   +    L
Sbjct: 196 EFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLR------------TSQDVVGNKFL 255

Query: 286 PN-GILNTEKYGASDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFH 345
            N  ++  E +  S   R +  +D   S  +S    P+  +                 F 
Sbjct: 256 ENSSLVLPESFPGSLLYRVIDEDDHRTSRLVSFKDEPTCSM-----------------FP 315

Query: 346 DNEPNPSATNMFKENSNQYPLSVGGVNSSSRSYFHNPSL-DSEYFSVYSAASTDRLSGLS 405
            NE N                       SSR+Y   P++  +E  S++    T      S
Sbjct: 316 TNEQN-----------------------SSRTYESKPAIYSTEVSSIWDLHET----AAS 375

Query: 406 DSGCALSLLSSQTQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVS 465
            S  ALSLLS+Q+Q    H S  P     +    QN    S      M     +      
Sbjct: 376 RSTRALSLLSAQSQQ---HLSKFPNTTFSITQPNQNLNHSSSTDYHQMEQPLWID----P 398

Query: 466 NKFDSSGLNASEGCTLGPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQ 525
            K +S+G ++ +G                                 +G  T+DLLQLSS 
Sbjct: 436 GKTNSAGSSSCKG---------------------------------KGTSTVDLLQLSSH 398

Query: 526 LHRVEHQRQ-AMQVKQESN 539
           L R+E QR     VKQE N
Sbjct: 496 LQRIEQQRNYTGDVKQEYN 398

[Close]

BLAST of Carg17875 vs. Swiss-Prot
Match: sp|B9DI20|SP13A_ARATH (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-32
Identity = 86/189 (45.50%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 94  SNAYLG---EDESTSKLSGSVV---DSTSRDSSFIDLKLGR--------FADHREAHGYK 153
           S+ YL    ++   S + GS+     S S+     DLKLGR        F D  +     
Sbjct: 8   SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLS 67

Query: 154 FFKGAPILASSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHS 213
            +K + +     S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHS
Sbjct: 68  KWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHS 127

Query: 214 KTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRF 267
           KT  V +NG +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F
Sbjct: 128 KTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANF 187

[Close]

BLAST of Carg17875 vs. Swiss-Prot
Match: sp|P0DI11|SP13B_ARATH (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-32
Identity = 86/189 (45.50%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 94  SNAYLG---EDESTSKLSGSVV---DSTSRDSSFIDLKLGR--------FADHREAHGYK 153
           S+ YL    ++   S + GS+     S S+     DLKLGR        F D  +     
Sbjct: 8   SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLS 67

Query: 154 FFKGAPILASSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHS 213
            +K + +     S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHS
Sbjct: 68  KWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHS 127

Query: 214 KTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVAINSGRAGRF 267
           KT  V +NG +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F
Sbjct: 128 KTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANF 187

[Close]

BLAST of Carg17875 vs. Swiss-Prot
Match: sp|A2X0Q6|SPL3_ORYSI (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=SPL3 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-32
Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 100 EDESTSKLSGSVVDSTSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMP--SK 159
           +D  TS+   S V + +R    I LKLG+     +  G +  K +P   S  +  P  +K
Sbjct: 112 DDTGTSR---SPVVAANRVEPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAK 171

Query: 160 RVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 219
           +V+ +  N+Q   CQV GCN DLSS+K YH++H+VCE HSKT KVIV G+E+RFCQQCSR
Sbjct: 172 KVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSR 231

Query: 220 FHLLAEFDDGKRSCRKRLAGHNERRRKPQ---VAINSGRAGRFLQSYNGSRLQGTAL 272
           FH LAEFD  KRSCR+RL  HN RRRKPQ   ++++S R    L  Y  +R Q + L
Sbjct: 232 FHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLSTLL--YGDARQQASFL 283

[Close]

BLAST of Carg17875 vs. Swiss-Prot
Match: sp|A3A2Z8|SPL3_ORYSJ (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL3 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-32
Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 100 EDESTSKLSGSVVDSTSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMP--SK 159
           +D  TS+   S V + +R    I LKLG+     +  G +  K +P   S  +  P  +K
Sbjct: 112 DDTGTSR---SPVVAANRVEPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAK 171

Query: 160 RVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 219
           +V+ +  N+Q   CQV GCN DLSS+K YH++H+VCE HSKT KVIV G+E+RFCQQCSR
Sbjct: 172 KVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSR 231

Query: 220 FHLLAEFDDGKRSCRKRLAGHNERRRKPQ---VAINSGRAGRFLQSYNGSRLQGTAL 272
           FH LAEFD  KRSCR+RL  HN RRRKPQ   ++++S R    L  Y  +R Q + L
Sbjct: 232 FHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLSTLL--YGDARQQASFL 283

[Close]

BLAST of Carg17875 vs. TrEMBL
Match: tr|A0A0A0LRX6|A0A0A0LRX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE=4 SV=1)

HSP 1 Score: 1006.9 bits (2602), Expect = 1.7e-290
Identity = 504/550 (91.64%), Postives = 523/550 (95.09%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFK+PC+FGSTMLPT Q VDNQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQVDNQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDSTS 120
           E +FPEMIGKQL DNSVCDILSSKVVGGR+LNP    S A+LGEDESTSKLS S+VDS+S
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFAD R+AHGYKFFKGAPIL+SSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASD 300
           GHNERRRKPQVAINSGR GRFLQSYNGSRLQGTALTATSFICQ ILPNG+L+ EKYG SD
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKEN 360
           WCRTVKIEDKNE MPLSAVH PS HLHSKSLFSPYDI+TQVPPFHDN PN SATN+FKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNIFKEN 360

Query: 361 SNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420
           SNQYPLSVGGVNS+SRSYFHNPSL SEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTL 480
           STHSSGIPIGRP+VLLDGQNHYSMSQLSEKLMGVSSQVSV+GVSNKF+SSGLN SEGCTL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLNTSEGCTL 480

Query: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540
           GPISTPETSDAVN EI+NRIFH SNLADP EGGPTIDLLQLSSQL RVEHQRQAMQVKQE
Sbjct: 481 GPISTPETSDAVNFEISNRIFHGSNLADPGEGGPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 547
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of Carg17875 vs. TrEMBL
Match: tr|A0A1S3BVC8|A0A1S3BVC8_CUCME (squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063 PE=4 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 2.6e-286
Identity = 499/550 (90.73%), Postives = 516/550 (93.82%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQHVDNQGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKHPC+F STMLPT Q VDNQGFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPTSQQVDNQGFG 60

Query: 61  EFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDSTS 120
           E +FPEMIGKQL DNSVCDILSSKVVGGR+LNP    S A+LGEDESTSKLS S+VDS+S
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RD  FIDLKLGRFAD R+ HGYKFFKGAPIL+SSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGASD 300
           GHNERRRKPQVAINSGR GRFLQSYNGSRLQGTALTATSFICQ ILPNG+L+ EKYG SD
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFKEN 360
           WCRTVKIEDKNE MPLSAVH PS HLHSKSLFSPYDI+TQVPPFHDN PN SATNMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420
           SNQYPLSVGGVNS+SRSYFHNPSL SEYF+VYSAASTDRLSGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASEGCTL 480
           STHSSGIPIGRP+VLLDGQNHYSMSQLSEKLMGVSSQVSV+GVSNKF SSGLN SEGCTL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLNTSEGCTL 480

Query: 481 GPISTPETSDAVNLEITNRIFHESNLADPCEGGPTIDLLQLSSQLHRVEHQRQAMQVKQE 540
           GPI TPETSDAVN EI+NRIFH SNLADP EG PTIDLLQLSSQL RVEHQRQAMQVKQE
Sbjct: 481 GPIPTPETSDAVNFEISNRIFHGSNLADPGEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 547
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 549

[Close]

BLAST of Carg17875 vs. TrEMBL
Match: tr|A0A2N9ITQ8|A0A2N9ITQ8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56689 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 9.5e-188
Identity = 357/559 (63.86%), Postives = 439/559 (78.53%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPT-SSLARNKDSLLGWEFKHPCNFGSTMLPTGQH-VDNQG 60
           MESW+ VSEGKG +SDE   P+ +SL+R+K+SLLGWE + PC+FG+ +L +GQ  V+NQ 
Sbjct: 1   MESWNCVSEGKGFVSDETILPSNNSLSRSKNSLLGWELRTPCSFGNDLLVSGQQGVENQR 60

Query: 61  FGEFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDS 120
           FGE  F +M GKQLA NS  +++S+KV G +++NP     NA+ GEDESTSKLS SV+DS
Sbjct: 61  FGELGFQDMFGKQLAHNSTSEVVSNKVGGEKFVNPVMSMPNAFSGEDESTSKLSSSVMDS 120

Query: 121 TSRDSSFIDLKLGRFADHRE-AHGYKFFKGAPI-LASSESSMPSKRVRASGLNSQTYFCQ 180
            SRDSSFIDLKLGR AD R+ AH  KF KG PI L+SSESS P+KRVRASG++SQT FCQ
Sbjct: 121 NSRDSSFIDLKLGRLADIRDAAHNSKFSKGVPILLSSSESSTPAKRVRASGVHSQTAFCQ 180

Query: 181 VYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCR 240
           VYGCNKDLSSSKDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL+EFDDGKRSCR
Sbjct: 181 VYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCR 240

Query: 241 KRLAGHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKY 300
           KRLAGHNERRRKPQ  I++GRAGRF+QSYNGSR QG+ LT TSF+CQ I P+G  + EKY
Sbjct: 241 KRLAGHNERRRKPQ-GIHAGRAGRFMQSYNGSRYQGSPLT-TSFVCQEIPPSGFFHPEKY 300

Query: 301 GASDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNM 360
           G SDWCR +K+E   +  P+S++   + + HSKSLF PY+I+ Q P FHD+  N +  ++
Sbjct: 301 GTSDWCRHIKVEGGTDYRPMSSIPITNGNQHSKSLFPPYNIEKQFPHFHDSGANTATGSI 360

Query: 361 FKENSNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAAST-DRLSGLSDSGCALSLLSS 420
           F +N++QY   +GG NSSSRS+F + SL SE FSV+ AAST   LSG+SDSGCALSLLSS
Sbjct: 361 FSDNASQYTHDIGGQNSSSRSFFQSASLGSEDFSVFDAASTVQGLSGISDSGCALSLLSS 420

Query: 421 QTQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNAS 480
           Q+QNSS+HSSGI + RP+++     HY MS++ EK +G+SSQ S +G SNKF SS +N++
Sbjct: 421 QSQNSSSHSSGIHMTRPLIMPGSNPHYGMSRVPEKFIGLSSQASPSGASNKFLSSEMNSA 480

Query: 481 EGCTLGPISTPETSDAVNLEITNRIFHES---NLAD--PCEGGPTIDLLQLSSQLHRVEH 540
           E   LG +   ++SDAVNLEI + IF  S   N +D   CE GPTIDLLQLSSQL RVEH
Sbjct: 481 EENHLGQVLISDSSDAVNLEIADGIFQGSEFLNSSDRHSCENGPTIDLLQLSSQLQRVEH 540

Query: 541 QRQAMQVKQESNAFCCLRI 546
           QRQ+MQ K+E++AFCCLRI
Sbjct: 541 QRQSMQSKKENDAFCCLRI 557

[Close]

BLAST of Carg17875 vs. TrEMBL
Match: tr|A0A061G524|A0A061G524_THECC (LIGULELESS1 protein, putative OS=Theobroma cacao OX=3641 GN=TCM_014330 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 7.8e-182
Identity = 339/560 (60.54%), Postives = 410/560 (73.21%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQH-VDNQGF 60
           MESWSYVS  KG +SD   SP+ S ARN+ +L+ WE K P +F + ML +GQ  ++N  F
Sbjct: 1   MESWSYVSGEKGSVSDAAISPSDSYARNRSALMNWELKGPYSFSNNMLVSGQQAIENHAF 60

Query: 61  GEFIFPEMIGKQLADNSVCDILSSKVVGGRYLNP----SNAYLGEDESTSKLSGSVVDST 120
           GE  + E IGKQL ++S+ D+LSSKV  GR +NP     NA+ GEDESTSK S SVVDS 
Sbjct: 61  GELGYGEFIGKQLPNDSIGDVLSSKVSRGRTVNPIMATLNAFSGEDESTSKFSSSVVDSN 120

Query: 121 SRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVYG 180
           SR+SS IDLKLGRF DHR+     F  GAP+L+SSESS P KRVRA+G+NS T +CQVYG
Sbjct: 121 SRESSLIDLKLGRFPDHRDGRNSSFSIGAPMLSSSESSTPPKRVRAAGVNSHTTYCQVYG 180

Query: 181 CNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRL 240
           CNKDL+S+KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRL
Sbjct: 181 CNKDLTSAKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRL 240

Query: 241 AGHNERRRKPQVAINSGRAGRFLQSYN---GSRLQGTALTATSFICQGILPNGILNTEKY 300
           AGHNERRRKPQ+ I+SGR+GR LQ YN   G R  GT LT  SFICQ ILP+G+L+ +KY
Sbjct: 241 AGHNERRRKPQIGIHSGRSGRLLQQYNGFAGGRFHGTMLTTASFICQDILPSGLLHPDKY 300

Query: 301 GASDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNM 360
             ++W + +K+ED  +  PL A+     H H KS + P  I+   P FH NE N +   +
Sbjct: 301 VTNEWGKRIKVEDGTDYSPLPAIPIMDGHFHLKSPYHPSSIEKLFPSFHGNEDNAATGGI 360

Query: 361 FKENSNQYPLSVGGVNSSSRSYFHNPSLDSEYFSVYSAAST-DRLSGLSDSGCALSLLSS 420
              N+ +YP   GG NS SR  F + SL SE  +V+ AAST   LSG+SDSGCALSLLSS
Sbjct: 361 LSVNNARYPHGFGGPNSVSRPLFQDTSLGSEDINVFDAASTIQGLSGISDSGCALSLLSS 420

Query: 421 QTQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNAS 480
           Q+QNSS+HSSGIP+ R +V+     HY+MSQ+S KL+GVSSQ S  GVSNKF SSG+N++
Sbjct: 421 QSQNSSSHSSGIPMSRSLVIPGSHTHYNMSQVSGKLIGVSSQTSTTGVSNKFSSSGMNST 480

Query: 481 EGCTLGPISTPETSDAVNLEITNRIFHESNLAD-----PCEGGPTIDLLQLSSQLHRVEH 540
           EG  LGP+   + S+A N +I+  I+ +S   +      CE GPTIDLLQLSSQL RVEH
Sbjct: 481 EGSHLGPLLISDGSEAANFDISGGIYQDSEFMNTKDRLSCEDGPTIDLLQLSSQLQRVEH 540

Query: 541 QRQAMQVKQESNAFCCLRIT 547
           QRQ+MQVKQE+ AFCCLRIT
Sbjct: 541 QRQSMQVKQENEAFCCLRIT 560

[Close]

BLAST of Carg17875 vs. TrEMBL
Match: tr|M5W9A5|M5W9A5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G208300 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.0e-181
Identity = 345/559 (61.72%), Postives = 408/559 (72.99%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDELNSPTSSLARNKDSLLGWEFKHPCNFGSTMLPTGQH-VDNQGF 60
           MESWS +SEGKG +S+E  S T S +R++++L+GWE K PC FGS +L +GQ  +++QGF
Sbjct: 1   MESWSRISEGKGFVSEETISHTDSFSRSRNTLMGWELKIPCTFGSNVLVSGQQAIESQGF 60

Query: 61  GEFIFPEMIGKQLADNSVCDILSSKVVGGRYLNPS-----NAYLGEDESTSKLSGSVVDS 120
           GE  FPEM+GK  ++N + D+LS KV G R  N +     N + GEDES+SKLS S+VDS
Sbjct: 61  GELGFPEMMGKHFSNNPIRDVLSGKVYGERSTNTTSMATPNLFSGEDESSSKLSSSIVDS 120

Query: 121 TSRDSSFIDLKLGRFADHREAHGYKFFKGAPILASSESSMPSKRVRASGLNSQTYFCQVY 180
            SRDSS IDLKLGR AD+R+ H  KF KG PIL+SSESS P KR+R SGL SQT +CQVY
Sbjct: 121 NSRDSSLIDLKLGRLADNRDFHDSKFSKGHPILSSSESSTPPKRMRVSGLYSQTAYCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCE HSKTAKVIVNG EQRFCQQCSRFHLLAEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGREQRFCQQCSRFHLLAEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQGILPNGILNTEKYGA 300
           LAGHNERRRKPQV I+SGRAGR LQSYNGSR Q   LT  SFICQ ILP+GIL+ E YG 
Sbjct: 241 LAGHNERRRKPQVGIHSGRAGRLLQSYNGSRFQDNMLTTASFICQEILPSGILDAENYGT 300

Query: 301 SDWCRTVKIEDKNESMPLSAVHAPSAHLHSKSLFSPYDIDTQVPPFHDNEPNPSATNMFK 360
           +DWCR +K+ED     PLS V   + HL  K  F  YDI  + PPFHDN  NP   N+  
Sbjct: 301 NDWCRHLKVEDATHYRPLSGVPVTNGHLPLKPAFPSYDIGKRYPPFHDNGTNPLTGNIII 360

Query: 361 ENSNQYPLSVGGVNSSSRSYFH-NPSLDSEYFSVYSAAST-DRLSGLSDSGCALSLLSSQ 420
           EN +QY   + G+NS S S FH   +L SE F+V++ AST   LSG+SDSGCALSLLSSQ
Sbjct: 361 ENGSQYSHDMRGLNSGSHSMFHETTTLGSEDFNVFNTASTVHGLSGISDSGCALSLLSSQ 420

Query: 421 TQNSSTHSSGIPIGRPMVLLDGQNHYSMSQLSEKLMGVSSQVSVNGVSNKFDSSGLNASE 480
           +Q SS+H SGIP+  P+V+ D   +Y + Q SE L+G  S  S +GVSNKF SSG+N+  
Sbjct: 421 SQKSSSHLSGIPMASPLVMPDRHTNYRLVQGSENLIGGCSHASSSGVSNKFPSSGMNSGA 480

Query: 481 GCTLGPISTPETSDAVNLEITNRIFHESNLAD-----PCEGGPTIDLLQLSSQLHRVEHQ 540
           G  LGPI     SD  +  I++ IF  S+  +      CE G TIDLLQLSSQL RVE Q
Sbjct: 481 GTHLGPILLCNGSDTDDFGISDGIFQGSDFVNAKDRLSCEDGTTIDLLQLSSQLQRVEDQ 540

Query: 541 RQAMQVKQESNAFCCLRIT 547
           RQ+MQVKQES+AFCCLRIT
Sbjct: 541 RQSMQVKQESDAFCCLRIT 559

The following BLAST results are available for this feature:

BLAST of Carg17875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921956.1	0.0e+00	99.45	squamosa promoter-binding-like protein 6 [Cucurbita moschata] >XP_022921957.1 sq...	[more]
XP_023515466.1	1.7e-310	97.62	squamosa promoter-binding-like protein 6 [Cucurbita pepo subsp. pepo] >XP_023515...	[more]
XP_022987111.1	4.0e-307	96.73	squamosa promoter-binding-like protein 6 [Cucurbita maxima] >XP_022987112.1 squa...	[more]
XP_004138332.1	2.6e-290	91.64	PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis sativus] >XP_011648...	[more]
XP_008453304.1	3.9e-286	90.73	PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453305...	[more]

BLAST of Carg17875 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69170.1	1.2e-42	32.87	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.1	7.6e-34	45.50	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	7.6e-34	45.50	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G43270.2	1.9e-32	53.33	squamosa promoter binding protein-like 2	[more]
AT1G27370.1	6.7e-30	61.05	squamosa promoter binding protein-like 10	[more]

BLAST of Carg17875 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94JW8\|SPL6_ARATH	2.1e-41	32.87	Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6...	[more]
sp\|B9DI20\|SP13A_ARATH	1.4e-32	45.50	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
sp\|P0DI11\|SP13B_ARATH	1.4e-32	45.50	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
sp\|A2X0Q6\|SPL3_ORYSI	1.4e-32	47.46	Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica OX=39946 ...	[more]
sp\|A3A2Z8\|SPL3_ORYSJ	1.4e-32	47.46	Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of Carg17875 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRX6\|A0A0A0LRX6_CUCSA	1.7e-290	91.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE=4 SV=1	[more]
tr\|A0A1S3BVC8\|A0A1S3BVC8_CUCME	2.6e-286	90.73	squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063...	[more]
tr\|A0A2N9ITQ8\|A0A2N9ITQ8_FAGSY	9.5e-188	63.86	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56689 PE=4 SV=1	[more]
tr\|A0A061G524\|A0A061G524_THECC	7.8e-182	60.54	LIGULELESS1 protein, putative OS=Theobroma cacao OX=3641 GN=TCM_014330 PE=4 SV=1	[more]
tr\|M5W9A5\|M5W9A5_PRUPE	1.0e-181	61.72	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G208300 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom
IPR036893	SBP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17875-RA	Carg17875-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 161..232 e-value: 2.4E-34 score: 119.1
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 169..248
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 171..244 e-value: 5.2E-32 score: 109.8
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 168..245 score: 32.342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 1..527
None	No IPR available	PANTHER	PTHR31251:SF22	SUBFAMILY NOT NAMED	coord: 1..527

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17875	Cla018546	Watermelon (97103) v1	carwmB0459
Carg17875	Cla019041	Watermelon (97103) v1	carwmB0461
Carg17875	Csa1G015680	Cucumber (Chinese Long) v2	carcuB0494
Carg17875	Csa1G039890	Cucumber (Chinese Long) v2	carcuB0492
Carg17875	MELO3C017245	Melon (DHL92) v3.5.1	carmeB0469
Carg17875	MELO3C002048	Melon (DHL92) v3.5.1	carmeB0467
Carg17875	ClCG06G015490	Watermelon (Charleston Gray)	carwcgB0451
Carg17875	ClCG04G011620	Watermelon (Charleston Gray)	carwcgB0449
Carg17875	CSPI01G06330	Wild cucumber (PI 183967)	carcpiB0498
Carg17875	CSPI01G03340	Wild cucumber (PI 183967)	carcpiB0500
Carg17875	Cucsa.198630	Cucumber (Gy14) v1	carcgyB0534
Carg17875	Cucsa.113410	Cucumber (Gy14) v1	carcgyB0530
Carg17875	CmaCh10G002860	Cucurbita maxima (Rimu)	carcmaB0640
Carg17875	CmaCh11G002230	Cucurbita maxima (Rimu)	carcmaB0641
Carg17875	CmaCh13G010590	Cucurbita maxima (Rimu)	carcmaB0645
Carg17875	CmoCh10G003040	Cucurbita moschata (Rifu)	carcmoB0622
Carg17875	CmoCh13G011040	Cucurbita moschata (Rifu)	carcmoB0626
Carg17875	CmoCh11G002260	Cucurbita moschata (Rifu)	carcmoB0623
Carg17875	Lsi02G001370	Bottle gourd (USVL1VR-Ls)	carlsiB417
Carg17875	Lsi06G013980	Bottle gourd (USVL1VR-Ls)	carlsiB420
Carg17875	Cp4.1LG04g14340	Cucurbita pepo (Zucchini)	carcpeB0651
Carg17875	Cp4.1LG20g00920	Cucurbita pepo (Zucchini)	carcpeB0647
Carg17875	Cp4.1LG18g07180	Cucurbita pepo (Zucchini)	carcpeB0646
Carg17875	CsGy1G006020	Cucumber (Gy14) v2	carcgybB0469
Carg17875	CsGy1G003300	Cucumber (Gy14) v2	carcgybB0471
Carg17875	MELO3C017245.2	Melon (DHL92) v3.6.1	carmedB0472
Carg17875	MELO3C002048.2	Melon (DHL92) v3.6.1	carmedB0470
Carg17875	CsaV3_1G003380	Cucumber (Chinese Long) v3	carcucB0497
Carg17875	CsaV3_1G006200	Cucumber (Chinese Long) v3	carcucB0495
Carg17875	Cla97C04G078460	Watermelon (97103) v2	carwmbB0484
Carg17875	Cla97C06G125010	Watermelon (97103) v2	carwmbB0487
Carg17875	Bhi08G000893	Wax gourd	carwgoB0560
Carg17875	Bhi02G000046	Wax gourd	carwgoB0563

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17875	Carg04776	Silver-seed gourd	carcarB410
Carg17875	Carg09190	Silver-seed gourd	carcarB459

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17875	Cucumber (Gy14) v2	carcgybB0468
Carg17875	Cucumber (Gy14) v1	carcgyB0532
Carg17875	Wild cucumber (PI 183967)	carcpiB0497
Carg17875	Cucumber (Chinese Long) v2	carcuB0491
Carg17875	Cucumber (Chinese Long) v3	carcucB0494