Carg17788 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17788
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Proteinaceous RNase P 1, chloroplastic/mitochondrial
Location	Cucurbita_argyrosperma_scaffold_070 : 25990 .. 34659 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACCTTAAGAAGTTCACTTATGCCTTCACTTGTAAAGACTTCTCCTTTCTTTTCATACTTCACTAAAATTCCATGGATATTTCCCGGCCAGAATACTTTTCAAGCTAGCCTCCAAGTCCATAGCCATCGGTCGACTGTATTTTCAAAAACTATACTGAAATGTAGTTGCAACAGTTACTTCTCTATACACGCAGCTAGATATTTTTGTTCTGTTGCTTTAGCTGCCACTTCGTCTGTTCACAAATCCTCAGCATCTTCTACCGATAAAATCTCGAACAGATCAAGGAAAAAAGCCCTCAAGGAATCGCCTGATAGAGTGCTTAAACATAAATTAGATATGTGCTCAAAGAATGGACAAGTTGTTGAAGCACTGAAGCTTTACGACGAGGCACGGAGTAATGGCATCCAACTTCAACAACATCATTATAATGTATTGCTGTATTTGTGTTCTTCGTCGAGCTCGCTTGAAACAAGTGAGGATATCGATGTATTAAGCGTGGGCTTGAGTAGGGGTTTCGAGATTTTTCAGCAAATGATGACTGATAAAGTATACCCAAATGAGGCGACATTTACTAGTGTTGCAAGATTGGCAACTGCAAGGGATGATCCAGAAATGGCTTTTTCTTTGGTGAAGCAGATGAAGGATTATGATATTGCACCAAGATTGAGGTCATATGGACCAGCACTTTTTGGTTTCTGTAGGAAGCTAATGCCTCAAGAAGCTTATGAAGTTGATTCCCACATGGCTGCAGCTGAGGTGCAACCCGAAGAACCTGAGCTTTCTGCTCTTCTAAAACTCAGTTCTGATGTGAAGAAGGCCGATAAGGTCTACGAGTTGCTGCTTCGGTTAAGAAGAACAGTGAGGCAGGTCTCTGAACCTACTGCTAAAGTTATTGAAGATTGGTTTAATTCTGAATGTGCAGCAGAAGTTGGTGTTAAACGTTGGGATGTGAACGAGGTTAGGGAAGGAATCGTTAAACGAGGTGGAGGGTGGCATGGACAAGGCTGGCTCGGTAGTGGGAAGTGGAGGCTCGTGAGAACTGTGATGGACGATAGTGGCGTTTGTCAGTTGTGTGGTCAGAAACTTGTTTGCATCGATATTGATCCGAAAGAAACTGAAAACTTTGCTGCCTCGTTGACCAAGTTGGCTTGCGAACGAGAAGTTAAAGCTGAATTTAATAGATTCCAGGTATGATAGTTCTTCTGTCATCCCCAGATTCTATGATTTGAAGTCTTAATTGTTCGTGGAGTGATAAGCTCACAACGTAAGTTTCCCATATTGCATCTCCTCTTGTTTGTTGTTGCTGCATACCCCTTCGTAGGGGCTTTTGTTATGATGGTCTCTCTCTTTTTTTCCCTTCATTCGTGACTATCCAAGCTGACTTGTGCACATCTCGACTATTCTCACGGGACAATCTTATGACCTTACTACATTTGGTTGCCAATGAAATCCATAAGATATTAAATCCTAGATAGGTTGTGTGAGATCCCACCTTGGTTGGGGAGGAGAACCAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGTTTTAAAAACCTTGAGGGGAAGCACGAAAGGATAAGCCGAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCCAAATATCAAGCGATGTGCCAGTGAGGAGGCTGAGCCTTAAAGGGGGGGGGGGGGGGGGGGAGAGGTGTCAACAAGAACGCTGGGCCTCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAATCTCTCCCTAGCAGATGCCATTTTAAAAACCTTGAGGGGAAGCTCGAAAAGGAAAGCCGAAAGAGGATAATATCTGCTAGCAGTTGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCAGGCGATGTGCCAGTGAGGAGGTTGAGCCCTGAAGGGGGGTGGACATGTGGCGGTGTGCCAGTAATGACGTTGGGACCCGAGGGGGGGGGGGCGGGGGTGGATTGTGAGATCACACATCAGTTGGGGAGTGGTAGGCTTGGGCTGTTATAAACCTTGAGGGGAAGCCCGAAGGAGAAAGCCGAAAGAGGATAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAAATGGTATTAGAACCAGACACCAAGCAATGTGCCAGCGAGGAGACTGAGCCCTGAAGGGGTGTGGACATGTGGCAGTGTGCCAGTAAGGATGCTGGGACCCAAAGGGGGGTGGATTGTGAGATCTCACATTGGTTGGGGTGGATTGTGAGATCTCACATTGGTTGGGGTGGATTGTGAGATCTCACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGGAAAACCGGGAAAACCCAAAAATGACAATATTGGCTAGTGGTGGGCTTGAGCCGTTACAGGTGGCCACCACGGCTTAAACCTATTCCATCCTAAGCCCTTTATTATTTCCATGGCTCTTATGGTTCACTTAGTCAATCTACAGTGGTTCTCTATCTGTTTTACATCTTTTCTTTAGAAAAGTAACATGTTAATTTATGTTGGCAAAAATCTGACTAGTTTGAAGGTGAAATACTTCAGGAGTGGCTTGAAAGGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAACGTTGGTCTTATTAATCAACATCATTTCAGCTTTATCCAGGTGATATATCTTTAGGTCTTACATTTTCTGTGTTTATTGTGATTGGTACTGAAATATACTATCTTCTAATTGCAGCTCAAAAGGGTTGTATATCAAATGCGTCAACTGAGCCCTACAAAGAGAATGCCACTCATAATTTTACATAGAAGTCGTGTTACTGGAGGTCCTGCACTGAATCCTAATAACAAGAGATTAATAGAGTCATGGAAAGATTGTGGTGCGCTCTATGCTACCCCTCATGGCTCCAATGATGACTGGTATTCATCTTTCTCGTTATTTAATTAATATTTGAAAACATCTATGTGAGATCTCACATCGGTAGGAGAGGGAAACGAAACATTTCTTATAAGGAAGTGGAAACCTTTCCATAATAGACGCGTTTTAAAACTGTGAGTCTGATGGTGATACGTAATGAGACAAAGTGGACAATATTTGCTAGTGGTGAGCTTGGGCTGTTTACAAACGGTATCAAAGCCGGATACTGGGCGGTGTGCCAGCGAGGACGTTGGACCCTCAAGGGGGGTGGATTGTGAGATCCCATATCGGTTGGAGTGGAAAACGAAACATTCCTTATAAGGGTGTGGAAGCCTCTTCGTGAGTCTGACGGGCAATATGTAATGGGATAAAGCGGACAATATCTGCTGGCGGTGGGCCTGGGGTGTTACAAGCGGTATTAGAGCCAAATACCGGGCCGTGTGTCAGTGAGGACGTTGGGTCTTCAAGGAGGGTGGATTGTGAGATCCTACGTTAGTTGGAGAGGGAAACTAAACATTCCTTATAAGGACGTGGAAACCTCTCCATAGTAGACGTGTTTTAAAATTGTGAGTCTAATAGCAATACTTAACGAGACAAAGCGGACAATATTTGCTAGTGATGGGACTGGGCTGTTACAAATGGTATCAGAGCCGGATACTGGGCAATGTGCAGCGAGAACGTTGGGCCCTCAAGGGGGGTGGATTGTGAGATCCCATATCGATTGGAGCGGAAAATGAAATATTCCTTGTAAGGGTCTGGAAGCCTCTTCCTAGTAGACGCGTTTTAAAATAGTGAGTCTGAGGCGATATGTAATGGGACAAAGCGGACAATATCTACTAACGGTGGGTTTGGAGCGGTACTAGCGGTATCAGAGCCAGATACCGGGTGGTGTGTCAGTGAGGACGTTGGGTCCTTAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGAAACTAAACATTCCTTATAAGGGGTGGAAACCTCTCCGTAGTAGACGTGTTCTAAAATCGTGAGTCTGACGGTGATATGTAATGGGACTAGCGGTGAGCTTGAACGGTTACATTTCACCAACCGTATGAGCTCAAGTTCTTTGTTTGTGTGCATGACATTGGAAAGCTGAGTACCCTTTATGAATGCTGATTACTAGGAATTCAAACCAGTCTATTCTATGTGTGCTACAGGTACTGGCTATATGCTGCTGTACGCTTTAAATGTTTTCTGCTGACGAACGATGAAATGAGAGACCACTTGTTCCAACTGCTTGGCAACAACTTTTTCCCGCAATGGAAGGAAAAGCATCAGGTATTTTTCATTACTTTTGGGATGTGAAATCCGACGTCGATTGGGGAAGAGAACAAAACATTCTTTATAAAAATGTGGAAACCTTTCCGTAACAGACGTAGTTTAAAAACTTTGAGAGGAAGCCTGAAAGGGAAAGCCTAAATGGGACAATATCTCCTAGCGGTGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAGACACCGGGAGATGTGCCAGCGAGGAGCAGCCCCGAAGGGGGAGTGGACACGAGGCGGTGTGTCAGAAAGGACGCTGGATCCCGAATGGGGTGGACTGGGGGGTCCCATATCGATTGGAGAAGGGAACAAGTGTCAGTGAGGACGCTGGCTCTCAAAGGAGGGTGGATTGTGAAATCCCACGTTGGTTGGAGAGGAGAACAAAACATTCTTTATAAGGGCGTGGAAACCTCTCACTAGCAGATGTGTTTTTAAAACTTTGAGGGGAATCCCAAAAGAGAAAACCTAAAGAGGATAATATATGCTAGCGGTGGATTTAGGCTGTTACATTTTTATTAAGAAGTTTCATAAAATACTTAATAACTCGTGATATCCGTGATTTTTCTCTCAATTAGTTGTTCATGTCTAAATATCAATCCATATATTGGTAAGTTCAAACCCATATTTTCTTCATTGATTCAAAGTAGTGTCGTTTTAATACTTCGTCCAATGATTGGCAGATTCGAATGTCGGTATCGCGAGATGGACTAAAACTCCACATGCCTCCGCCTTATTCAGTTGTCATTCAGGTGCAACGATTAACGTGTAAATCTTTAAAATATGAACATTCATCGTTCGTGTTTTAGATATTTGATGAATGTTGAATCTATTCCAGGAGTGTGAAAATGGAAGTTGGCACATTCCAACGGCCACAGGTGATGATCTAGAGACCCCAAAGCAATGGCTGTGTGCCACCAGAGCGAACTGATATTTGAATTTGATAGCATTTTGGTGTCTCGTAAGTCTTATATTATTGTAGCTAGCCTCCACCAACACACGACTCCGTCAGTGTCACTGTCGCCATTACCTCGTTTCATATATGAGACGAGGGAGGAGCTTCCCTTTGTCTCATTTCTGAGAGGGGAGAGAACGACAAGGGAGAAAGATGAGAGATAGAGCTCGACGCTATTTTTTTTCTAGAACTTCTTTTGTTTAACGACATTGTAACTAAGTATTCTTAATCATTGTCATTATCTTCATTCATTTCATAATCATGACAATCTTTTCATTCCATTCAATTCACTTATGAACTAAAATTCTTTTGAGATTCAGTAATAACATCAATGTCCTAAAACGATAAGATATTTATATTCGTATGTTTTGATCACGAATCTTTTGATGGTTTAGTCTGAAAAAATAGTTACAAATTCGAAAATGTAAGGACTAAATTATTACTGATCAAAGCTCAAGGATTCATTCTTCTGCATTTCTCGAAAACTACCTCATTAACATGTTTTGTCCTCACTCATATATCGTAAGAAAATTAACGGGAGGTCACCAACATAAAAAGCACCCTTAACTATGAAGTTTCTATGATTGAGCAACAAAAAAAGAAGATACACCATATCATAAGATCACTTTCATTTAAATGTAGTTTTCTTCGTAGTCTCTCCTCGTGTCCAACGGGAGAGAATTAGCCATTTGAGGGTCCAAAACTTGGGTCAGGAAGGAAAAGGATCGAGTGGACACACAGACCAACAAGCTCACTCACTTTTTCACTTTAAATCTCTACCGTCCCTAGTCGAAGTTCCGCTTTTCCCCCTTTAATGGCTCTGCTTTTTTCTCTCCATAAACAAGGCGAAGAAGACATGTAATGAGAGAATCTCTGTTCTACTGCGACCTCCGATAACCCACAATCCCATAAAAACAAAACCCCCATCTGCCGCTACTTCCTATCTCGCTTCATTTCCACTCGTAAGTCTCTATTTCTCATTCTATGTTCTGTGTTATGTACCATTATCTCATCGATGGTCTTGTTTAGGCAAATGGGGTTTTACTAAAATTGATTCTTCTGGCTGTTTTTGGAGTTCTAGTGAAATTGGTTCGTTTCTCAGTGATGAACAGGAACTGGGTTTTTGGTAAATCGATTCCGTTTCCCTGTATGAGGGTTTTCTGGGTTTGTTCTTCATTAGCAGCCCAGAAATGGGTTTCTTCTTTCTCTCCTTCTAAGTCGCTTGATTGGCATGCTCTGTTGTTCTTATTCTTGGTGATTCTTTGCTTAAACCCTTCCCACTCAGTGGACCTTAACCCTCAAGATGGGGCCTCTCTTTTAGCGTTCAAATCATCGATTCAAGACCCTAATAAGAATTTATCAAGCTGGATTGGTTCTAACTGTTCAGATTGGACTGGAATCGCTTGTGAAAACAAGACTGGTAGAGTGGTTTCCATTAAACTCTCTGATATGAACTTGTCTGGCCAAATTAACCCTGGATTATGTAACCTTTCATTTCTTGAGCATCTGATTTTATCCCAGAACAACTTTTCTTGCTCAATACCGACGTGTTTCGGTAATTTGATCCGTCTTCGAACTGTTGATTTGAGTGGTAATCGGTTTCAAGGTGTTGTGCCTGAGACATTGATGAAGCTAGAGAACTTGGAAGAGCTTGTTTTGGTTGGGAACCAATACTTAAAGGGTCCTATTCCTTCTTGGATTGGGAACTTTTCAACAAAGCTGCAGAAACTTGATCTGGGTTTCAATTCTTTTAGTGGTGAACTGCCTGAGAGTTTGTCGAACTCGACGTCCCTTAAGTATTTGGATCTTCGAAATAACTATTTGAAAGGAAATGTGTTCGATTTCCAGCAGCCTTTGGTTTTGCTGAATCTCATGTCGAATCGATTTTCTGGAACGCTACCTTGTTTTTCAGCTTGCAAGCAGTCACTCACAGTTTTGAATTTGGCTAACAATTCTATTTTTGGAGGCGTACCAACGTGTATCGCATCGCTTCGTGCTTTGGTTCAGTTGAATCTATCGTCGAATCATTTAACTTACAAGATGTCTCCTAGACTCCTGTTTTCGGAGCAGCTACTCGTGTTGGACTTGAGTAACAATGATATATATGGCCCTCTTCCGAGCAGGATCGTGGAGACGATAGAGAAATCAGGGCTTGTTCTTCTTGACTTGTCTCACAATCGATTTTCGGGTGGAATTCCATCGAAGATCACGGAACTGAGAAGTTTGCAGGCGTTGTTTCTTTCGCACAATCTCCTTGTCGGGGAAATTCCTGCAAGGATTGGGAATCTGACATATCTCCAAGTCATTGATCTCTCGTATAACTTCTTATCGGGCTCGATTCCATTGAACATTGTTGGATGCTTTCAATTACTTGCTTTGATACTCAACAACAATAATCTTTCTGGTGAGATTCAACCTGAGCTCGATGCATTGGATAGTCTGAAGATATTAGACATTAGCAACAACATGATTTCTGGTGAAGTACCACTGACTTTGGCAGGATGTAAATCGTTGGAGATCGTTGATTTCAGCTCCAACAATCTGTCGGGAAATTTGAACGATGCGATAACGAAATGGTCGAACCTGAGATATCTCTCCCTCGCTCGCAACAAGTTCATAGGTAACCTTCCCAGTTGGTTGTTTGCATTTGAAGTAATTCAGCTGATGGACTTCTCAAGCAACAAATTTTCTGGCTCCATACCTGATGTCAACTTCAACATATGCTCGAATTTTAACAGCGGCGACATTAGTAGGCCATCGAAAGATCCATTCGCAGCAAAGAAAGTTGTGAATTTTAAAGTTTCTACCGTTGTAGATGTCGGTAGCGAATTACGATTCAATTATGATCTGTCTTCAGCTGTTGGAATCGATTTGTCGAATAATCTGTTACACGGGTCGATCCCGGAAGGTCTATTTTCACTAGAGGGTCTGCAATACTTGAACTTATCATATAACTCTCTTGAAGGACAGCTTCCTGGGTTAGAGAACATGCAGAGTGTAAGAGCCTTAGATTTGTCCCACAATTATCTGTCTGGTGAAATCCCAGGAAATATATCCATACTCGAGGATTTGACTCTTCTCGATCTGTCGTATAACTGCTTCTCGGGTTTGGTTTCAGAGAAGCAGGGATTCAAGTGGTTCCCAGGTGCATTTGCTGGGAATCCAGAACTGTGTGTGGAGTCTTCGGGCGAAGGGTGTCGTTCCACTGGGTATCCAACTGTTCCGGGGAAGATATCAGATTCGGAATCGGAGGGGCCGATATCGGTTTGGGTTTTCTGTTTGAGTGCATTTGTTAGTTTCTACTTGGGTACTGTTTCCCTGTTGTGTTCTGCTAGAGCAAGAAACTACTTTCTCCACACAAAAGCTTAA

mRNA sequence

ATGACAACCTTAAGAAGTTCACTTATGCCTTCACTTGTAAAGACTTCTCCTTTCTTTTCATACTTCACTAAAATTCCATGGATATTTCCCGGCCAGAATACTTTTCAAGCTAGCCTCCAAGTCCATAGCCATCGGTCGACTGTATTTTCAAAAACTATACTGAAATGTAGTTGCAACAGTTACTTCTCTATACACGCAGCTAGATATTTTTGTTCTGTTGCTTTAGCTGCCACTTCGTCTGTTCACAAATCCTCAGCATCTTCTACCGATAAAATCTCGAACAGATCAAGGAAAAAAGCCCTCAAGGAATCGCCTGATAGAGTGCTTAAACATAAATTAGATATGTGCTCAAAGAATGGACAAGTTGTTGAAGCACTGAAGCTTTACGACGAGGCACGGAGTAATGGCATCCAACTTCAACAACATCATTATAATGTATTGCTGTATTTGTGTTCTTCGTCGAGCTCGCTTGAAACAAGTGAGGATATCGATGTATTAAGCGTGGGCTTGAGTAGGGGTTTCGAGATTTTTCAGCAAATGATGACTGATAAAGTATACCCAAATGAGGCGACATTTACTAGTGTTGCAAGATTGGCAACTGCAAGGGATGATCCAGAAATGGCTTTTTCTTTGGTGAAGCAGATGAAGGATTATGATATTGCACCAAGATTGAGGTCATATGGACCAGCACTTTTTGGTTTCTGTAGGAAGCTAATGCCTCAAGAAGCTTATGAAGTTGATTCCCACATGGCTGCAGCTGAGGTGCAACCCGAAGAACCTGAGCTTTCTGCTCTTCTAAAACTCAGTTCTGATGTGAAGAAGGCCGATAAGGTCTACGAGTTGCTGCTTCGGTTAAGAAGAACAGTGAGGCAGGTCTCTGAACCTACTGCTAAAGTTATTGAAGATTGGTTTAATTCTGAATGTGCAGCAGAAGTTGGTGTTAAACGTTGGGATGTGAACGAGGTTAGGGAAGGAATCGTTAAACGAGGTGGAGGGTGGCATGGACAAGGCTGGCTCGGTAGTGGGAAGTGGAGGCTCGTGAGAACTGTGATGGACGATAGTGGCGTTTGTCAGTTGTGTGGTCAGAAACTTGTTTGCATCGATATTGATCCGAAAGAAACTGAAAACTTTGCTGCCTCGTTGACCAAGTTGGCTTGCGAACGAGAAGTTAAAGCTGAATTTAATAGATTCCAGGAGTGGCTTGAAAGGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAACGTTGGTCTTATTAATCAACATCATTTCAGCTTTATCCAGATTCGAATGTCGGTATCGCGAGATGGACTAAAACTCCACATGCCTCCGCCTTATTCAGTTGTCATTCAGGCAAATGGGGTTTTACTAAAATTGATTCTTCTGGCTGTTTTTGGAGTTCTAGTGAAATTGGTTCGTTTCTCAGTGATGAACAGGAACTGGGTTTTTGGTAAATCGATTCCGTTTCCCTGTATGAGGGTTTTCTGGGTTTGTTCTTCATTAGCAGCCCAGAAATGGGTTTCTTCTTTCTCTCCTTCTAAGTCGCTTGATTGGCATGCTCTGTTGTTCTTATTCTTGGTGATTCTTTGCTTAAACCCTTCCCACTCAGTGGACCTTAACCCTCAAGATGGGGCCTCTCTTTTAGCGTTCAAATCATCGATTCAAGACCCTAATAAGAATTTATCAAGCTGGATTGGTTCTAACTGTTCAGATTGGACTGGAATCGCTTGTGAAAACAAGACTGGTAGAGTGGTTTCCATTAAACTCTCTGATATGAACTTGTCTGGCCAAATTAACCCTGGATTATGTAACCTTTCATTTCTTGAGCATCTGATTTTATCCCAGAACAACTTTTCTTGCTCAATACCGACGTGTTTCGGTAATTTGATCCGTCTTCGAACTGTTGATTTGAGTGGTAATCGGTTTCAAGGTGTTGTGCCTGAGACATTGATGAAGCTAGAGAACTTGGAAGAGCTTGTTTTGGTTGGGAACCAATACTTAAAGGGTCCTATTCCTTCTTGGATTGGGAACTTTTCAACAAAGCTGCAGAAACTTGATCTGGGTTTCAATTCTTTTAGTGGTGAACTGCCTGAGAGTTTGTCGAACTCGACGTCCCTTAAGTATTTGGATCTTCGAAATAACTATTTGAAAGGAAATGTGTTCGATTTCCAGCAGCCTTTGGTTTTGCTGAATCTCATGTCGAATCGATTTTCTGGAACGCTACCTTGTTTTTCAGCTTGCAAGCAGTCACTCACAGTTTTGAATTTGGCTAACAATTCTATTTTTGGAGGCGTACCAACGTGTATCGCATCGCTTCGTGCTTTGGTTCAGTTGAATCTATCGTCGAATCATTTAACTTACAAGATGTCTCCTAGACTCCTGTTTTCGGAGCAGCTACTCGTGTTGGACTTGAGTAACAATGATATATATGGCCCTCTTCCGAGCAGGATCGTGGAGACGATAGAGAAATCAGGGCTTGTTCTTCTTGACTTGTCTCACAATCGATTTTCGGGTGGAATTCCATCGAAGATCACGGAACTGAGAAGTTTGCAGGCGTTGTTTCTTTCGCACAATCTCCTTGTCGGGGAAATTCCTGCAAGGATTGGGAATCTGACATATCTCCAAGTCATTGATCTCTCGTATAACTTCTTATCGGGCTCGATTCCATTGAACATTGTTGGATGCTTTCAATTACTTGCTTTGATACTCAACAACAATAATCTTTCTGGTGAGATTCAACCTGAGCTCGATGCATTGGATAGTCTGAAGATATTAGACATTAGCAACAACATGATTTCTGGTGAAGTACCACTGACTTTGGCAGGATGTAAATCGTTGGAGATCGTTGATTTCAGCTCCAACAATCTGTCGGGAAATTTGAACGATGCGATAACGAAATGGTCGAACCTGAGATATCTCTCCCTCGCTCGCAACAAGTTCATAGGTAACCTTCCCAGTTGGTTGTTTGCATTTGAAGTAATTCAGCTGATGGACTTCTCAAGCAACAAATTTTCTGGCTCCATACCTGATGTCAACTTCAACATATGCTCGAATTTTAACAGCGGCGACATTAGTAGGCCATCGAAAGATCCATTCGCAGCAAAGAAAGTTGTGAATTTTAAAGTTTCTACCGTTGTAGATGTCGGTAGCGAATTACGATTCAATTATGATCTGTCTTCAGCTGTTGGAATCGATTTGTCGAATAATCTGTTACACGGGTCGATCCCGGAAGGTCTATTTTCACTAGAGGGTCTGCAATACTTGAACTTATCATATAACTCTCTTGAAGGACAGCTTCCTGGGTTAGAGAACATGCAGAGTGTAAGAGCCTTAGATTTGTCCCACAATTATCTGTCTGGTGAAATCCCAGGAAATATATCCATACTCGAGGATTTGACTCTTCTCGATCTGTCGTATAACTGCTTCTCGGGTTTGGTTTCAGAGAAGCAGGGATTCAAGTGGTTCCCAGGTGCATTTGCTGGGAATCCAGAACTGTGTGTGGAGTCTTCGGGCGAAGGGTGTCGTTCCACTGGGTATCCAACTGTTCCGGGGAAGATATCAGATTCGGAATCGGAGGGGCCGATATCGGTTTGGGTTTTCTGTTTGAGTGCATTTGTTAGTTTCTACTTGGGTACTGTTTCCCTGTTGTGTTCTGCTAGAGCAAGAAACTACTTTCTCCACACAAAAGCTTAA

Coding sequence (CDS)

ATGACAACCTTAAGAAGTTCACTTATGCCTTCACTTGTAAAGACTTCTCCTTTCTTTTCATACTTCACTAAAATTCCATGGATATTTCCCGGCCAGAATACTTTTCAAGCTAGCCTCCAAGTCCATAGCCATCGGTCGACTGTATTTTCAAAAACTATACTGAAATGTAGTTGCAACAGTTACTTCTCTATACACGCAGCTAGATATTTTTGTTCTGTTGCTTTAGCTGCCACTTCGTCTGTTCACAAATCCTCAGCATCTTCTACCGATAAAATCTCGAACAGATCAAGGAAAAAAGCCCTCAAGGAATCGCCTGATAGAGTGCTTAAACATAAATTAGATATGTGCTCAAAGAATGGACAAGTTGTTGAAGCACTGAAGCTTTACGACGAGGCACGGAGTAATGGCATCCAACTTCAACAACATCATTATAATGTATTGCTGTATTTGTGTTCTTCGTCGAGCTCGCTTGAAACAAGTGAGGATATCGATGTATTAAGCGTGGGCTTGAGTAGGGGTTTCGAGATTTTTCAGCAAATGATGACTGATAAAGTATACCCAAATGAGGCGACATTTACTAGTGTTGCAAGATTGGCAACTGCAAGGGATGATCCAGAAATGGCTTTTTCTTTGGTGAAGCAGATGAAGGATTATGATATTGCACCAAGATTGAGGTCATATGGACCAGCACTTTTTGGTTTCTGTAGGAAGCTAATGCCTCAAGAAGCTTATGAAGTTGATTCCCACATGGCTGCAGCTGAGGTGCAACCCGAAGAACCTGAGCTTTCTGCTCTTCTAAAACTCAGTTCTGATGTGAAGAAGGCCGATAAGGTCTACGAGTTGCTGCTTCGGTTAAGAAGAACAGTGAGGCAGGTCTCTGAACCTACTGCTAAAGTTATTGAAGATTGGTTTAATTCTGAATGTGCAGCAGAAGTTGGTGTTAAACGTTGGGATGTGAACGAGGTTAGGGAAGGAATCGTTAAACGAGGTGGAGGGTGGCATGGACAAGGCTGGCTCGGTAGTGGGAAGTGGAGGCTCGTGAGAACTGTGATGGACGATAGTGGCGTTTGTCAGTTGTGTGGTCAGAAACTTGTTTGCATCGATATTGATCCGAAAGAAACTGAAAACTTTGCTGCCTCGTTGACCAAGTTGGCTTGCGAACGAGAAGTTAAAGCTGAATTTAATAGATTCCAGGAGTGGCTTGAAAGGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAACGTTGGTCTTATTAATCAACATCATTTCAGCTTTATCCAGATTCGAATGTCGGTATCGCGAGATGGACTAAAACTCCACATGCCTCCGCCTTATTCAGTTGTCATTCAGGCAAATGGGGTTTTACTAAAATTGATTCTTCTGGCTGTTTTTGGAGTTCTAGTGAAATTGGTTCGTTTCTCAGTGATGAACAGGAACTGGGTTTTTGGTAAATCGATTCCGTTTCCCTGTATGAGGGTTTTCTGGGTTTGTTCTTCATTAGCAGCCCAGAAATGGGTTTCTTCTTTCTCTCCTTCTAAGTCGCTTGATTGGCATGCTCTGTTGTTCTTATTCTTGGTGATTCTTTGCTTAAACCCTTCCCACTCAGTGGACCTTAACCCTCAAGATGGGGCCTCTCTTTTAGCGTTCAAATCATCGATTCAAGACCCTAATAAGAATTTATCAAGCTGGATTGGTTCTAACTGTTCAGATTGGACTGGAATCGCTTGTGAAAACAAGACTGGTAGAGTGGTTTCCATTAAACTCTCTGATATGAACTTGTCTGGCCAAATTAACCCTGGATTATGTAACCTTTCATTTCTTGAGCATCTGATTTTATCCCAGAACAACTTTTCTTGCTCAATACCGACGTGTTTCGGTAATTTGATCCGTCTTCGAACTGTTGATTTGAGTGGTAATCGGTTTCAAGGTGTTGTGCCTGAGACATTGATGAAGCTAGAGAACTTGGAAGAGCTTGTTTTGGTTGGGAACCAATACTTAAAGGGTCCTATTCCTTCTTGGATTGGGAACTTTTCAACAAAGCTGCAGAAACTTGATCTGGGTTTCAATTCTTTTAGTGGTGAACTGCCTGAGAGTTTGTCGAACTCGACGTCCCTTAAGTATTTGGATCTTCGAAATAACTATTTGAAAGGAAATGTGTTCGATTTCCAGCAGCCTTTGGTTTTGCTGAATCTCATGTCGAATCGATTTTCTGGAACGCTACCTTGTTTTTCAGCTTGCAAGCAGTCACTCACAGTTTTGAATTTGGCTAACAATTCTATTTTTGGAGGCGTACCAACGTGTATCGCATCGCTTCGTGCTTTGGTTCAGTTGAATCTATCGTCGAATCATTTAACTTACAAGATGTCTCCTAGACTCCTGTTTTCGGAGCAGCTACTCGTGTTGGACTTGAGTAACAATGATATATATGGCCCTCTTCCGAGCAGGATCGTGGAGACGATAGAGAAATCAGGGCTTGTTCTTCTTGACTTGTCTCACAATCGATTTTCGGGTGGAATTCCATCGAAGATCACGGAACTGAGAAGTTTGCAGGCGTTGTTTCTTTCGCACAATCTCCTTGTCGGGGAAATTCCTGCAAGGATTGGGAATCTGACATATCTCCAAGTCATTGATCTCTCGTATAACTTCTTATCGGGCTCGATTCCATTGAACATTGTTGGATGCTTTCAATTACTTGCTTTGATACTCAACAACAATAATCTTTCTGGTGAGATTCAACCTGAGCTCGATGCATTGGATAGTCTGAAGATATTAGACATTAGCAACAACATGATTTCTGGTGAAGTACCACTGACTTTGGCAGGATGTAAATCGTTGGAGATCGTTGATTTCAGCTCCAACAATCTGTCGGGAAATTTGAACGATGCGATAACGAAATGGTCGAACCTGAGATATCTCTCCCTCGCTCGCAACAAGTTCATAGGTAACCTTCCCAGTTGGTTGTTTGCATTTGAAGTAATTCAGCTGATGGACTTCTCAAGCAACAAATTTTCTGGCTCCATACCTGATGTCAACTTCAACATATGCTCGAATTTTAACAGCGGCGACATTAGTAGGCCATCGAAAGATCCATTCGCAGCAAAGAAAGTTGTGAATTTTAAAGTTTCTACCGTTGTAGATGTCGGTAGCGAATTACGATTCAATTATGATCTGTCTTCAGCTGTTGGAATCGATTTGTCGAATAATCTGTTACACGGGTCGATCCCGGAAGGTCTATTTTCACTAGAGGGTCTGCAATACTTGAACTTATCATATAACTCTCTTGAAGGACAGCTTCCTGGGTTAGAGAACATGCAGAGTGTAAGAGCCTTAGATTTGTCCCACAATTATCTGTCTGGTGAAATCCCAGGAAATATATCCATACTCGAGGATTTGACTCTTCTCGATCTGTCGTATAACTGCTTCTCGGGTTTGGTTTCAGAGAAGCAGGGATTCAAGTGGTTCCCAGGTGCATTTGCTGGGAATCCAGAACTGTGTGTGGAGTCTTCGGGCGAAGGGTGTCGTTCCACTGGGTATCCAACTGTTCCGGGGAAGATATCAGATTCGGAATCGGAGGGGCCGATATCGGTTTGGGTTTTCTGTTTGAGTGCATTTGTTAGTTTCTACTTGGGTACTGTTTCCCTGTTGTGTTCTGCTAGAGCAAGAAACTACTTTCTCCACACAAAAGCTTAA

Protein sequence

MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNSYFSIHAARYFCSVALAATSSVHKSSASSTDKISNRSRKKALKESPDRVLKHKLDMCSKNGQVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIEDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLINQHHFSFIQIRMSVSRDGLKLHMPPPYSVVIQANGVLLKLILLAVFGVLVKLVRFSVMNRNWVFGKSIPFPCMRVFWVCSSLAAQKWVSSFSPSKSLDWHALLFLFLVILCLNPSHSVDLNPQDGASLLAFKSSIQDPNKNLSSWIGSNCSDWTGIACENKTGRVVSIKLSDMNLSGQINPGLCNLSFLEHLILSQNNFSCSIPTCFGNLIRLRTVDLSGNRFQGVVPETLMKLENLEELVLVGNQYLKGPIPSWIGNFSTKLQKLDLGFNSFSGELPESLSNSTSLKYLDLRNNYLKGNVFDFQQPLVLLNLMSNRFSGTLPCFSACKQSLTVLNLANNSIFGGVPTCIASLRALVQLNLSSNHLTYKMSPRLLFSEQLLVLDLSNNDIYGPLPSRIVETIEKSGLVLLDLSHNRFSGGIPSKITELRSLQALFLSHNLLVGEIPARIGNLTYLQVIDLSYNFLSGSIPLNIVGCFQLLALILNNNNLSGEIQPELDALDSLKILDISNNMISGEVPLTLAGCKSLEIVDFSSNNLSGNLNDAITKWSNLRYLSLARNKFIGNLPSWLFAFEVIQLMDFSSNKFSGSIPDVNFNICSNFNSGDISRPSKDPFAAKKVVNFKVSTVVDVGSELRFNYDLSSAVGIDLSNNLLHGSIPEGLFSLEGLQYLNLSYNSLEGQLPGLENMQSVRALDLSHNYLSGEIPGNISILEDLTLLDLSYNCFSGLVSEKQGFKWFPGAFAGNPELCVESSGEGCRSTGYPTVPGKISDSESEGPISVWVFCLSAFVSFYLGTVSLLCSARARNYFLHTKA

Homology

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BLAST of Carg17788 vs. NCBI nr
Match: XP_022960768.1 (proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 769.6 bits (1986), Expect = 1.6e-218
Identity = 429/433 (99.08%), Postives = 431/433 (99.54%), Query Frame = 0


Query: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60
           MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS
Sbjct: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60

Query: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120
           YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG
Sbjct: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120

Query: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180
           QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM
Sbjct: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180

Query: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240
           MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP
Sbjct: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240

Query: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300
           QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI
Sbjct: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300

Query: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360
           EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC
Sbjct: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360

Query: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420
           GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN
Sbjct: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420

Query: 421 QHHFSFIQIRMSV 434
           QHHFSFIQ++  V
Sbjct: 421 QHHFSFIQLKRVV 433

[Close]

BLAST of Carg17788 vs. NCBI nr
Match: XP_022988265.1 (proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 748.4 bits (1931), Expect = 3.8e-212
Identity = 378/433 (87.30%), Postives = 386/433 (89.15%), Query Frame = 0


Query: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60
           MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTF+ASLQVHS RSTVFSK ILKCSCNS
Sbjct: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFRASLQVHSRRSTVFSKNILKCSCNS 60

Query: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120
           YFSIHAARY C+VA                                        MCSKNG
Sbjct: 61  YFSIHAARYLCTVALASTSSVHESSASSTDKISNRSRKKALKESPERVLKHKLDMCSKNG 120

Query: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180
           QVVEAL+LYDEARSNGI+L+QHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM
Sbjct: 121 QVVEALQLYDEARSNGIKLEQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180

Query: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240
           MTDKV PNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP
Sbjct: 181 MTDKVSPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240

Query: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300
           QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI
Sbjct: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300

Query: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360
           EDWFNSECAA+VGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQ C
Sbjct: 301 EDWFNSECAADVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQSC 360

Query: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420
           GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN
Sbjct: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420

Query: 421 QHHFSFIQIRMSV 434
           QHHFSFIQ++  V
Sbjct: 421 QHHFSFIQLKRVV 433

[Close]

BLAST of Carg17788 vs. NCBI nr
Match: XP_023516015.1 (proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 747.7 bits (1929), Expect = 6.4e-212
Identity = 399/552 (72.28%), Postives = 405/552 (73.37%), Query Frame = 0


Query: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60
           MTTLRSSLMPSLVKTSPFFSYFTKIPWIF GQNTF+ASLQVHSHRSTVFSKTILKCSCNS
Sbjct: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFSGQNTFRASLQVHSHRSTVFSKTILKCSCNS 60

Query: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120
           YFSIHAARY C+VA                                        MCSKNG
Sbjct: 61  YFSIHAARYLCTVALASTSSVHESSASSTDKISNRSRKKALKESPERVLKHKLDMCSKNG 120

Query: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180
           QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSS SLETSEDIDVLSVGLSRGFEIFQQM
Sbjct: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSGSLETSEDIDVLSVGLSRGFEIFQQM 180

Query: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240
           MTDKV PNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP
Sbjct: 181 MTDKVSPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240

Query: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300
           QEAYEVDSHMAA+EVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI
Sbjct: 241 QEAYEVDSHMAASEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300

Query: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360
           EDWFNS CAAEVGVKRWD+N+VREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQ C
Sbjct: 301 EDWFNSACAAEVGVKRWDMNDVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQSC 360

Query: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420
           GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWL+RHGPFDAVIDGANVGLIN
Sbjct: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLDRHGPFDAVIDGANVGLIN 420

Query: 421 QHHFSFI----------------------------------------------------- 452
           QHHFSFI                                                     
Sbjct: 421 QHHFSFIQLKRIVYQMRQLSPTKRMPLIILHRSRVTGGPALNPNNKRLIESWKDCGALYA 480

[Close]

BLAST of Carg17788 vs. NCBI nr
Match: XP_022159393.1 (proteinaceous RNase P 1, chloroplastic/mitochondrial-like, partial [Momordica charantia])

HSP 1 Score: 615.5 bits (1586), Expect = 3.8e-172
Identity = 311/433 (71.82%), Postives = 343/433 (79.21%), Query Frame = 0


Query: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60
           M T  SSLMPSLVKTS FFS FTKIP IF GQNT +ASLQV++  ST++SK+ILK SCNS
Sbjct: 1   MLTRGSSLMPSLVKTSLFFSLFTKIPCIFSGQNTLRASLQVYTCHSTIYSKSILKYSCNS 60

Query: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120
           Y SIH   Y C+VA                                        MCS+NG
Sbjct: 61  YLSIHKVGYLCTVALSATSSVHESSASSTNKVSNRLRKKALRESPDRVLKHKLDMCSRNG 120

Query: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180
            V+EALKLYDEARSNGIQL +HHYNVLLYLCSSSSSLETS DID+LSVGL+RGFEIFQQM
Sbjct: 121 NVIEALKLYDEARSNGIQLNEHHYNVLLYLCSSSSSLETSGDIDILSVGLTRGFEIFQQM 180

Query: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240
           M DKV PNEATFTS AR+A A+DDPEMAF+LVK MKDY IAPRLRSY PALFGFCRKLM 
Sbjct: 181 MIDKVSPNEATFTSAARIAAAKDDPEMAFALVKHMKDYGIAPRLRSYAPALFGFCRKLMS 240

Query: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300
           +EAYEVDSHM A++VQ EEPELSALLKLSSDVKK DKVYE L RLR+TVRQVSEPT K++
Sbjct: 241 KEAYEVDSHMVASQVQAEEPELSALLKLSSDVKKTDKVYEFLHRLRKTVRQVSEPTVKIV 300

Query: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360
           EDWF SE AAEVG KRWD ++VRE I +RGGGWHGQGWLGSG WRLVRT MDD+GVC  C
Sbjct: 301 EDWFKSESAAEVGKKRWDASKVREAITRRGGGWHGQGWLGSGNWRLVRTQMDDNGVCHSC 360

Query: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420
            +KLVCIDIDPKETE+FAASLTKLAC+RE KA FN+FQEWLE+HGPFDAVIDGANVGL N
Sbjct: 361 ARKLVCIDIDPKETESFAASLTKLACQREAKAGFNQFQEWLEKHGPFDAVIDGANVGLGN 420

Query: 421 QHHFSFIQIRMSV 434
           QH FSFIQ++  V
Sbjct: 421 QHQFSFIQLKRVV 433

[Close]

BLAST of Carg17788 vs. NCBI nr
Match: XP_004142562.1 (PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 2.2e-167
Identity = 338/433 (78.06%), Postives = 371/433 (85.68%), Query Frame = 0


Query: 1   MTTLRSSLMPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNS 60
           MTTL SSLM S  KTSPFF YFTKIP +FP QN  +ASL+ +S RS VFSK ILK SCNS
Sbjct: 1   MTTLASSLMSSFAKTSPFFLYFTKIP-VFPCQNPLRASLRTYSCRSIVFSKNILKYSCNS 60

Query: 61  YFSIHAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNG 120
           YFSIH  RY C+VA    XXXXXXXXXXXXXXXXXXXXXXXXXX          MCSK G
Sbjct: 61  YFSIHTVRYLCNVASAATXXXXXXXXXXXXXXXXXXXXXXXXXXPESVLKYNLDMCSKYG 120

Query: 121 QVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQM 180
           QVV+AL+LYDEARSNGIQL QHHYNVLLYLCSS S LETS   ++ SV LSRGFEIFQQM
Sbjct: 121 QVVKALELYDEARSNGIQLNQHHYNVLLYLCSSPSLLETSGANNLSSVVLSRGFEIFQQM 180

Query: 181 MTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMP 240
           MTDKV PNEATFTS+AR+A ARDDPEMAFSLVKQMKDY IAPRLRSYGPALFGFCRKLMP
Sbjct: 181 MTDKVSPNEATFTSLARIAAARDDPEMAFSLVKQMKDYHIAPRLRSYGPALFGFCRKLMP 240

Query: 241 QEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVI 300
           +EAYEVDSHM A+ V+PEE ELSALLKLSSDVKKADKVYELL RLRRTVRQVSEPTAKVI
Sbjct: 241 KEAYEVDSHMLASAVEPEELELSALLKLSSDVKKADKVYELLHRLRRTVRQVSEPTAKVI 300

Query: 301 EDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLC 360
           EDWFNSE A+EVG K WDV++VRE IV+RGGGWHG+GWLGSGKW+LVRT +DD+GVC  C
Sbjct: 301 EDWFNSESASEVGKKHWDVDKVRECIVRRGGGWHGEGWLGSGKWKLVRTGIDDNGVCHSC 360

Query: 361 GQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLIN 420
            QKLVCIDIDPKETE+FA+SLTKLA +R VKA+FN FQ WLE+HGPFDAVIDGANVGL+N
Sbjct: 361 AQKLVCIDIDPKETEDFASSLTKLANQR-VKADFNNFQGWLEKHGPFDAVIDGANVGLVN 420

Query: 421 QHHFSFIQIRMSV 434
           +  F+FIQ++ +V
Sbjct: 421 ERQFNFIQLKRAV 431

[Close]

BLAST of Carg17788 vs. TAIR10
Match: AT2G32230.1 (proteinaceous RNase P 1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.5e-125
Identity = 215/321 (66.98%), Postives = 258/321 (80.37%), Query Frame = 0


Query: 115 MCSKNGQVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 174
           MCSK G V+EAL+LYDEAR NG+QL Q+HYNVLLY+CS + +   S      + GLSRGF
Sbjct: 106 MCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSP----NPGLSRGF 165

Query: 175 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGF 234
           +IF+QM+ DKV PNEATFT+ ARLA A+DDPEMAF +VKQMK + I PRLRSYGPALFGF
Sbjct: 166 DIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGF 225

Query: 235 CRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSE 294
           CRK    +AYEVD+HM  +EV PEEPEL+ALLK+S D K ADKVY+ L RLR  VRQVS+
Sbjct: 226 CRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 285

Query: 295 PTAKVIEDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDS 354
            T  +IE+WF SE A + GVK+WDV ++R+ +V  GGGWHGQGWLG+GKW + RT MD++
Sbjct: 286 STFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDEN 345

Query: 355 GVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGA 414
           GVC+ C +KLVCIDI+P ETE FAASLT+LACEREVKA FN+FQEWLERHGPFDAVIDGA
Sbjct: 346 GVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGA 405

Query: 415 NVGLINQHHFSFIQIRMSVSR 436
           N+GL+NQ  FSF Q+  +V R
Sbjct: 406 NMGLVNQRSFSFFQLNNTVQR 422

[Close]

BLAST of Carg17788 vs. TAIR10
Match: AT2G16650.1 (proteinaceous RNase P 2)

HSP 1 Score: 264.6 bits (675), Expect = 3.0e-70
Identity = 141/319 (44.20%), Postives = 199/319 (62.38%), Query Frame = 0


Query: 116 CSKNGQVVEALKLYDEA-RSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 175
           CSK+  +  AL LYD A  S+ ++L Q H+  LLYLCS+S +     DI +  + + RGF
Sbjct: 40  CSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLCSASIT-----DISLQYLAIDRGF 99

Query: 176 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYD--IAPRLRSYGPALF 235
           EIF +M++  + PNEA+ TSVARLA A+ + + AF +VK+         PRLR+Y PAL 
Sbjct: 100 EIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIPRLRTYAPALL 159

Query: 236 GFCRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQV 295
            FC KL  ++ YEV+ HM AA +  EE E+SALLK+S+   + +KVY  L +LR  V  V
Sbjct: 160 CFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGRENKVYRYLHKLREYVGCV 219

Query: 296 SEPTAKVIEDWFNSECAAEVGVK--RWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTV 355
           SE T K+IE+WF  E A EVG      DV  +RE ++  GGGWHG GW+G GKW + +  
Sbjct: 220 SEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGHGWVGEGKWTVKKGN 279

Query: 356 MDDSGVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVKAE-------FNRFQEWLER 415
           +  +G C  C ++L C+D +  ET+ F  SL  LA +R+ K         F+ FQ+WLE+
Sbjct: 280 VSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVFSEFQDWLEK 339

Query: 416 HGPFDAVIDGANVGLINQH 423
           HG ++A++DGAN+GL  Q+
Sbjct: 340 HGDYEAIVDGANIGLYQQN 353

[Close]

BLAST of Carg17788 vs. TAIR10
Match: AT4G21900.1 (proteinaceous RNase P 3)

HSP 1 Score: 256.5 bits (654), Expect = 8.2e-68
Identity = 141/320 (44.06%), Postives = 199/320 (62.19%), Query Frame = 0


Query: 116 CSKNGQVVEALKLYDEA-RSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 175
           CSK   +  AL LYD A  S+ I+L Q H+  LLYLCS+  S     D  + +V + RGF
Sbjct: 99  CSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFIS-----DPSLQTVAIDRGF 158

Query: 176 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYD--IAPRLRSYGPALF 235
           +IF +M++  + PNE++ T+VARLA A+ D + AF LVK +        PRLR+Y PAL 
Sbjct: 159 QIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTYAPALL 218

Query: 236 GFCRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQV 295
            FC  L  ++ YEV+ HM A+ +  EE E+SALLK+S+   + +KVY  L +LR  V  V
Sbjct: 219 CFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRECVGCV 278

Query: 296 SEPTAKVIEDWFNSECAAEV---GVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRT 355
           SE T+K IE+WF    A+EV   G+   D+  +R  ++K GGGWHG GW+G GKW + + 
Sbjct: 279 SEETSKAIEEWFYGVKASEVSDNGIGS-DIELLRAAVLKNGGGWHGLGWVGEGKWIVKKG 338

Query: 356 VMDDSGVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVK-------AEFNRFQEWLE 415
            +  +G C  C + L C+D +  ETE+F  SL  LA ER+ K       A+F+ FQEWLE
Sbjct: 339 NVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQEWLE 398

Query: 416 RHGPFDAVIDGANVGLINQH 423
           +HG ++A++DGAN+GL  Q+
Sbjct: 399 KHGDYEAILDGANIGLYQQN 412

[Close]

BLAST of Carg17788 vs. TAIR10
Match: AT1G65380.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-35
Identity = 123/194 (63.40%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 1038 VNFKVSTVVDVGSELRFNYDLSSAVGIDLSNNLLHGSIPEGLFSLEGLQYLNLSYNSLEG 1097
            V  K+S  V    EL F+Y+L S VGIDLS+NLLHG IPE LF  + ++YLNLSYN LEG
Sbjct: 527  VEIKISAAVVAKDELSFSYNLLSMVGIDLSDNLLHGEIPEALFRQKNIEYLNLSYNFLEG 586

Query: 1098 QLPGLENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKQGFKWFPG 1157
            QLP LE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +G   FPG
Sbjct: 587  QLPRLEKLPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLGKFPG 646

Query: 1158 AFAGNPELCVESSGEGCRSTGYPTVPGKISDSE-SEGPISVWVFCLSAFVSFYLGTVSLL 1217
            A AGNPELCVE+ G  C          +I  +E  EGPIS+W+FCLSAF+SF  G + + 
Sbjct: 647  ALAGNPELCVETPGSKCDPANIDASQEEIYQNELVEGPISIWIFCLSAFISFDFGVLGIF 706

Query: 1218 CSARARNYFLHTKA 1231
            CSARAR+Y L TKA
Sbjct: 707  CSARARSYILQTKA 720

[Close]

BLAST of Carg17788 vs. TAIR10
Match: AT5G60430.1 (drug transmembrane transporters;antiporters)

HSP 1 Score: 114.0 bits (284), Expect = 6.6e-25
Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 0


Query: 322 VREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCGQKLVCIDIDPKETENFAASL 381
           +RE ++K GGGWHG GW+G GKW + +  +  +G C  C ++L C+D +  ET+ F  SL
Sbjct: 2   LREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSL 61

Query: 382 TKLACEREVKAE-------FNRFQEWLERHGPFDAVIDGANVGLINQH----HFSFIQIR 434
             LA ER+ K         F+ FQ+WLE+HG ++A++DGAN+GL  Q+     FS  Q+ 
Sbjct: 62  VALAMERKAKMNSCESDVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQVL 121

[Close]

BLAST of Carg17788 vs. Swiss-Prot
Match: sp|Q66GI4|PRRP1_ARATH (Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.5e-124
Identity = 215/321 (66.98%), Postives = 258/321 (80.37%), Query Frame = 0


Query: 115 MCSKNGQVVEALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 174
           MCSK G V+EAL+LYDEAR NG+QL Q+HYNVLLY+CS + +   S      + GLSRGF
Sbjct: 106 MCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSP----NPGLSRGF 165

Query: 175 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGF 234
           +IF+QM+ DKV PNEATFT+ ARLA A+DDPEMAF +VKQMK + I PRLRSYGPALFGF
Sbjct: 166 DIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGF 225

Query: 235 CRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSE 294
           CRK    +AYEVD+HM  +EV PEEPEL+ALLK+S D K ADKVY+ L RLR  VRQVS+
Sbjct: 226 CRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 285

Query: 295 PTAKVIEDWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDS 354
            T  +IE+WF SE A + GVK+WDV ++R+ +V  GGGWHGQGWLG+GKW + RT MD++
Sbjct: 286 STFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDEN 345

Query: 355 GVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGA 414
           GVC+ C +KLVCIDI+P ETE FAASLT+LACEREVKA FN+FQEWLERHGPFDAVIDGA
Sbjct: 346 GVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGA 405

Query: 415 NVGLINQHHFSFIQIRMSVSR 436
           N+GL+NQ  FSF Q+  +V R
Sbjct: 406 NMGLVNQRSFSFFQLNNTVQR 422

[Close]

BLAST of Carg17788 vs. Swiss-Prot
Match: sp|Q680B9|PRRP2_ARATH (Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.4e-69
Identity = 141/319 (44.20%), Postives = 199/319 (62.38%), Query Frame = 0


Query: 116 CSKNGQVVEALKLYDEA-RSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 175
           CSK+  +  AL LYD A  S+ ++L Q H+  LLYLCS+S +     DI +  + + RGF
Sbjct: 40  CSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLCSASIT-----DISLQYLAIDRGF 99

Query: 176 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYD--IAPRLRSYGPALF 235
           EIF +M++  + PNEA+ TSVARLA A+ + + AF +VK+         PRLR+Y PAL 
Sbjct: 100 EIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIPRLRTYAPALL 159

Query: 236 GFCRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQV 295
            FC KL  ++ YEV+ HM AA +  EE E+SALLK+S+   + +KVY  L +LR  V  V
Sbjct: 160 CFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGRENKVYRYLHKLREYVGCV 219

Query: 296 SEPTAKVIEDWFNSECAAEVGVK--RWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTV 355
           SE T K+IE+WF  E A EVG      DV  +RE ++  GGGWHG GW+G GKW + +  
Sbjct: 220 SEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGHGWVGEGKWTVKKGN 279

Query: 356 MDDSGVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVKAE-------FNRFQEWLER 415
           +  +G C  C ++L C+D +  ET+ F  SL  LA +R+ K         F+ FQ+WLE+
Sbjct: 280 VSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVFSEFQDWLEK 339

Query: 416 HGPFDAVIDGANVGLINQH 423
           HG ++A++DGAN+GL  Q+
Sbjct: 340 HGDYEAIVDGANIGLYQQN 353

[Close]

BLAST of Carg17788 vs. Swiss-Prot
Match: sp|F4JKB6|PRRP3_ARATH (Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-66
Identity = 141/320 (44.06%), Postives = 199/320 (62.19%), Query Frame = 0


Query: 116 CSKNGQVVEALKLYDEA-RSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGF 175
           CSK   +  AL LYD A  S+ I+L Q H+  LLYLCS+  S     D  + +V + RGF
Sbjct: 99  CSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFIS-----DPSLQTVAIDRGF 158

Query: 176 EIFQQMMTDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYD--IAPRLRSYGPALF 235
           +IF +M++  + PNE++ T+VARLA A+ D + AF LVK +        PRLR+Y PAL 
Sbjct: 159 QIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTYAPALL 218

Query: 236 GFCRKLMPQEAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQV 295
            FC  L  ++ YEV+ HM A+ +  EE E+SALLK+S+   + +KVY  L +LR  V  V
Sbjct: 219 CFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRECVGCV 278

Query: 296 SEPTAKVIEDWFNSECAAEV---GVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRT 355
           SE T+K IE+WF    A+EV   G+   D+  +R  ++K GGGWHG GW+G GKW + + 
Sbjct: 279 SEETSKAIEEWFYGVKASEVSDNGIGS-DIELLRAAVLKNGGGWHGLGWVGEGKWIVKKG 338

Query: 356 VMDDSGVCQLCGQKLVCIDIDPKETENFAASLTKLACEREVK-------AEFNRFQEWLE 415
            +  +G C  C + L C+D +  ETE+F  SL  LA ER+ K       A+F+ FQEWLE
Sbjct: 339 NVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQEWLE 398

Query: 416 RHGPFDAVIDGANVGLINQH 423
           +HG ++A++DGAN+GL  Q+
Sbjct: 399 KHGDYEAILDGANIGLYQQN 412

[Close]

BLAST of Carg17788 vs. Swiss-Prot
Match: sp|O80809|CLV2_ARATH (Receptor-like protein CLAVATA2 OS=Arabidopsis thaliana OX=3702 GN=CLV2 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-34
Identity = 123/194 (63.40%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 1038 VNFKVSTVVDVGSELRFNYDLSSAVGIDLSNNLLHGSIPEGLFSLEGLQYLNLSYNSLEG 1097
            V  K+S  V    EL F+Y+L S VGIDLS+NLLHG IPE LF  + ++YLNLSYN LEG
Sbjct: 527  VEIKISAAVVAKDELSFSYNLLSMVGIDLSDNLLHGEIPEALFRQKNIEYLNLSYNFLEG 586

Query: 1098 QLPGLENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKQGFKWFPG 1157
            QLP LE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +G   FPG
Sbjct: 587  QLPRLEKLPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLGKFPG 646

Query: 1158 AFAGNPELCVESSGEGCRSTGYPTVPGKISDSE-SEGPISVWVFCLSAFVSFYLGTVSLL 1217
            A AGNPELCVE+ G  C          +I  +E  EGPIS+W+FCLSAF+SF  G + + 
Sbjct: 647  ALAGNPELCVETPGSKCDPANIDASQEEIYQNELVEGPISIWIFCLSAFISFDFGVLGIF 706

Query: 1218 CSARARNYFLHTKA 1231
            CSARAR+Y L TKA
Sbjct: 707  CSARARSYILQTKA 720

[Close]

BLAST of Carg17788 vs. Swiss-Prot
Match: sp|Q940E8|FEA2_MAIZE (Leucine-rich repeat receptor-like protein FASCIATED EAR2 OS=Zea mays OX=4577 GN=FEA2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-07
Identity = 101/223 (45.29%), Postives = 118/223 (52.91%), Query Frame = 0


Query: 1013 FNICSNFN-SGDISRPSKDPFAAKKVVNFKVSTVVDVGSELRFNYDLSSAVGIDLSNNLL 1072
            FN+    N  G    PS+     +  V+  V T   V  +L   YD+ +  GIDLS N L
Sbjct: 392  FNVSEVLNGGGGQGTPSESVLPPQLFVSASVDT---VSWQLDLGYDVQATTGIDLSGNEL 451

Query: 1073 HGSIPEGLFSLEGLQYLNLSYNSLEGQLPGLENXXXXXXXXXXXXXXXXXXXXXXXXXXX 1132
             G IPEGL  +                      XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 452  CGEIPEGLVDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 511

Query: 1133 XXXXXXXXXXXXXXXSEKQGFKWFPGAFAGNPELCVESSGEGCRSTGYPTVPGKISDSES 1192
            XXXXXXXXXXXXXXX        FPGA AGNP +C   SG+GC S    T  GK+  S  
Sbjct: 512  XXXXXXXXXXXXXXXXXXTK---FPGALAGNPGIC---SGKGC-SENARTPEGKMEGSNH 571

Query: 1193 EGPISVW----------VFCLSAFVSFYLGTVSLLCSARARNY 1225
             G +  W           FC+S   SFY+   +LLCS+ ARN+
Sbjct: 572  RGWLGGWHGENGWVSLGAFCISTMTSFYVSLATLLCSSNARNF 604

[Close]

BLAST of Carg17788 vs. TrEMBL
Match: tr|A0A1S3B8R1|A0A1S3B8R1_CUCME (LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103487238 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 2.5e-159
Identity = 300/431 (69.61%), Postives = 336/431 (77.96%), Query Frame = 0


Query: 9   MPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNSYFSIHAAR 68
           M SLVKTSPFF YFTKIPW+FP QNT +ASLQ +S RS VFSK ILK SCNSYF IH  R
Sbjct: 1   MSSLVKTSPFFLYFTKIPWVFPCQNTLRASLQTYSCRSIVFSKNILKYSCNSYFPIHTVR 60

Query: 69  YFCSVA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNGQVVE 128
           Y C+VA                                            MCSK GQVV+
Sbjct: 61  YLCNVASAATSSVHASSTPSSNKGSYKLRKKLMKKDSRDAPENVLRYKLDMCSKYGQVVK 120

Query: 129 ALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQMMTDK 188
           AL+LYDEARS+G+QL  HHYNVLLYLCSS S LETS   ++LSV LSRG EI+QQM+TDK
Sbjct: 121 ALELYDEARSDGVQLILHHYNVLLYLCSSPSLLETSGANNLLSVVLSRGLEIYQQMITDK 180

Query: 189 VYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQEAY 248
           V PNEATFTS+AR+A A DDPEMAFSLVKQM+DY IAPRLRSYGPALFGFCRKLMP+ AY
Sbjct: 181 VSPNEATFTSLARIAGAMDDPEMAFSLVKQMEDYHIAPRLRSYGPALFGFCRKLMPEGAY 240

Query: 249 EVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIEDWF 308
           EVDSHM A+ V+PEEPELSALLKLSSDVK+ADKVYELL RLRRTVRQVSEPTAKVIEDWF
Sbjct: 241 EVDSHMLASAVEPEEPELSALLKLSSDVKRADKVYELLHRLRRTVRQVSEPTAKVIEDWF 300

Query: 309 NSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCGQKL 368
           NSE A+EVG K WDV++VREGIV+RGGGWHG+  LGSGKWRLVRT +DD+GVC  C QKL
Sbjct: 301 NSESASEVGKKHWDVDKVREGIVRRGGGWHGEXXLGSGKWRLVRTGIDDNGVCHSCAQKL 360

Query: 369 VCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLINQHHF 428
           VCIDIDPKETE+FA+SLTKLA +R VK  F +F+ WLE+HGPFDAVIDGANVG+ N  HF
Sbjct: 361 VCIDIDPKETEDFASSLTKLANQR-VKDNFGKFRVWLEKHGPFDAVIDGANVGIEND-HF 420

Query: 429 SFIQIRMSVSR 436
           SFIQ++ +V R
Sbjct: 421 SFIQLKRAVYR 429

[Close]

BLAST of Carg17788 vs. TrEMBL
Match: tr|A0A0A0LY34|A0A0A0LY34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659050 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 1.7e-147
Identity = 307/390 (78.72%), Postives = 333/390 (85.38%), Query Frame = 0


Query: 9   MPSLVKTSPFFSYFTKIPWIFPGQNTFQASLQVHSHRSTVFSKTILKCSCNSYFSIHAAR 68
           M S  KTSPFF YFTKIP +FP QN  +ASL+ +S RS VFSK ILK SCNSYFSIH  R
Sbjct: 1   MSSFAKTSPFFLYFTKIP-VFPCQNPLRASLRTYSCRSIVFSKNILKYSCNSYFSIHTVR 60

Query: 69  YFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNGQVVEALKL 128
           Y C+VA    XXXXXXXXXXXXXXXXXXXXXXXXXX          MCSK GQVV+AL+L
Sbjct: 61  YLCNVASAATXXXXXXXXXXXXXXXXXXXXXXXXXXPESVLKYNLDMCSKYGQVVKALEL 120

Query: 129 YDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDIDVLSVGLSRGFEIFQQMMTDKVYPN 188
           YDEARSNGIQL QHHYNVLLYLCSS S LETS   ++ SV LSRGFEIFQQMMTDKV PN
Sbjct: 121 YDEARSNGIQLNQHHYNVLLYLCSSPSLLETSGANNLSSVVLSRGFEIFQQMMTDKVSPN 180

Query: 189 EATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQEAYEVDS 248
           EATFTS+AR+A ARDDPEMAFSLVKQMKDY IAPRLRSYGPALFGFCRKLMP+EAYEVDS
Sbjct: 181 EATFTSLARIAAARDDPEMAFSLVKQMKDYHIAPRLRSYGPALFGFCRKLMPKEAYEVDS 240

Query: 249 HMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIEDWFNSEC 308
           HM A+ V+PEE ELSALLKLSSDVKKADKVYELL RLRRTVRQVSEPTAKVIEDWFNSE 
Sbjct: 241 HMLASAVEPEELELSALLKLSSDVKKADKVYELLHRLRRTVRQVSEPTAKVIEDWFNSES 300

Query: 309 AAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCGQKLVCID 368
           A+EVG K WDV++VRE IV+RGGGWHG+GWLGSGKW+LVRT +DD+GVC  C QKLVCID
Sbjct: 301 ASEVGKKHWDVDKVRECIVRRGGGWHGEGWLGSGKWKLVRTGIDDNGVCHSCAQKLVCID 360

Query: 369 IDPKETENFAASLTKLACEREVKAEFNRFQ 399
           IDPKETE+FA+SLTKLA +R VKA+FN FQ
Sbjct: 361 IDPKETEDFASSLTKLANQR-VKADFNNFQ 388

[Close]

BLAST of Carg17788 vs. TrEMBL
Match: tr|V4TLQ9|V4TLQ9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031025mg PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 2.4e-130
Identity = 251/434 (57.83%), Postives = 303/434 (69.82%), Query Frame = 0


Query: 8   LMPSLVKTSPFFSYFTKIPWIFPGQ---NTFQASLQVHSHRSTVFSKTILKCSCNSYFSI 67
           L PSL++TSPF ++ +KI      Q   +T++  L  H H    F+K I     N  FS 
Sbjct: 7   LTPSLIRTSPFLTFLSKISLPLMHQSNCHTYRPLLCWHMHS---FTKPITDIKQNR-FSA 66

Query: 68  HAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNGQVVE 127
                 C++A                                        MCSK G V E
Sbjct: 67  DLTTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFE 126

Query: 128 ALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDID---VLSVGLSRGFEIFQQMM 187
           AL+LYD+ARSNGI L QHHYNVLLY+CS     E+SE+ D    L++GL RGFEIFQQM+
Sbjct: 127 ALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRETDLNLGLKRGFEIFQQMI 186

Query: 188 TDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQ 247
           TDKV PNEATFTSVARLA A++DPEMAF LVKQMK + I P+LRSYGPALFGFC+     
Sbjct: 187 TDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTD 246

Query: 248 EAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIE 307
           +AYEVD+HM  + V PEEPELSALLKLS D KK DKVYE+L RLR  VRQVSE T K+IE
Sbjct: 247 KAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIE 306

Query: 308 DWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCG 367
           DWF+S  AAE+GV  WDV++VREGIV+ GGGWHGQGWLGSGKWR+ RT +D++GVC  C 
Sbjct: 307 DWFDSVDAAEIGVLNWDVSKVREGIVRGGGGWHGQGWLGSGKWRVERTQIDENGVCCSCN 366

Query: 368 QKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLINQ 427
           ++LVCIDIDP+ETENFA+SL+ LAC+REV+++FN+FQEWL RHGPFDAVIDGANVGL+NQ
Sbjct: 367 ERLVCIDIDPRETENFASSLSNLACQREVRSDFNKFQEWLGRHGPFDAVIDGANVGLVNQ 426

Query: 428 HHFSFIQIRMSVSR 436
           H+FSF Q+   V+R
Sbjct: 427 HNFSFYQLNTVVNR 436

[Close]

BLAST of Carg17788 vs. TrEMBL
Match: tr|A0A2H5NTK9|A0A2H5NTK9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073520 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 2.4e-130
Identity = 251/434 (57.83%), Postives = 303/434 (69.82%), Query Frame = 0


Query: 8   LMPSLVKTSPFFSYFTKIPWIFPGQ---NTFQASLQVHSHRSTVFSKTILKCSCNSYFSI 67
           L PSL++TSPF ++ +KI      Q   +T++  L  H H    F+K I     N  FS 
Sbjct: 7   LTPSLIRTSPFLTFLSKISLPLMHQSNCHTYRPLLCWHMHS---FTKPITDIKQNR-FSA 66

Query: 68  HAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNGQVVE 127
                 C++A                                        MCSK G V E
Sbjct: 67  DLTTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFE 126

Query: 128 ALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDID---VLSVGLSRGFEIFQQMM 187
           AL+LYD+ARSNGI L QHHYNVLLY+CS     E+SE+ D    L++GL RGFEIFQQM+
Sbjct: 127 ALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDLNLGLKRGFEIFQQMI 186

Query: 188 TDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQ 247
           TDKV PNEATFTSVARLA A++DPEMAF LVKQMK + I P+LRSYGPALFGFC+     
Sbjct: 187 TDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTD 246

Query: 248 EAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIE 307
           +AYEVD+HM  + V PEEPELSALLKLS D KK DKVYE+L RLR  VRQVSE T K+IE
Sbjct: 247 KAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIE 306

Query: 308 DWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCG 367
           DWF+S  AAE+GV  WDV++VREGIV+ GGGWHGQGWLGSGKWR+ RT +D++GVC  C 
Sbjct: 307 DWFDSVDAAEIGVLNWDVSKVREGIVRGGGGWHGQGWLGSGKWRVERTQIDENGVCCSCN 366

Query: 368 QKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLINQ 427
           ++LVCIDIDP+ETENFA+SL+ LAC+REV+++FN+FQEWL RHGPFDAVIDGANVGL+NQ
Sbjct: 367 ERLVCIDIDPRETENFASSLSNLACQREVRSDFNKFQEWLGRHGPFDAVIDGANVGLVNQ 426

Query: 428 HHFSFIQIRMSVSR 436
           H+FSF Q+   V+R
Sbjct: 427 HNFSFYQLNTVVNR 436

[Close]

BLAST of Carg17788 vs. TrEMBL
Match: tr|A0A067EQ41|A0A067EQ41_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g007684mg PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 7.0e-130
Identity = 250/434 (57.60%), Postives = 303/434 (69.82%), Query Frame = 0


Query: 8   LMPSLVKTSPFFSYFTKIPWIFPGQ---NTFQASLQVHSHRSTVFSKTILKCSCNSYFSI 67
           L PSL++TSPF ++ +KI      Q   +T+++ L  H H    F+K I     N  FS 
Sbjct: 7   LTPSLIRTSPFLTFLSKISLPLMHQSNCHTYRSLLCWHMHS---FTKPITDIKQNR-FSA 66

Query: 68  HAARYFCSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSKNGQVVE 127
                 C++A                                        MCSK G V E
Sbjct: 67  DLTTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFE 126

Query: 128 ALKLYDEARSNGIQLQQHHYNVLLYLCSSSSSLETSEDID---VLSVGLSRGFEIFQQMM 187
           AL+LYD+ARSNGI L QHHYNVLLY+CS     E+SE+ D     ++GL RGFEIFQQM+
Sbjct: 127 ALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQMI 186

Query: 188 TDKVYPNEATFTSVARLATARDDPEMAFSLVKQMKDYDIAPRLRSYGPALFGFCRKLMPQ 247
           TDKV PNEATFTSVARLA A++DPEMAF LVKQMK + I P+LRSYGPALFGFC+     
Sbjct: 187 TDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTD 246

Query: 248 EAYEVDSHMAAAEVQPEEPELSALLKLSSDVKKADKVYELLLRLRRTVRQVSEPTAKVIE 307
           +AYEVD+HM  + V PEEPELSALLKLS D KK DKVYE+L RLR  VRQVSE T K+IE
Sbjct: 247 KAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIE 306

Query: 308 DWFNSECAAEVGVKRWDVNEVREGIVKRGGGWHGQGWLGSGKWRLVRTVMDDSGVCQLCG 367
           DWF+S  AAE+GV  WDV++VREGIV+ GGGWHGQGWLGSGKWR+ RT +D++GVC  C 
Sbjct: 307 DWFDSVDAAEIGVLNWDVSKVREGIVRGGGGWHGQGWLGSGKWRVERTQIDENGVCCSCN 366

Query: 368 QKLVCIDIDPKETENFAASLTKLACEREVKAEFNRFQEWLERHGPFDAVIDGANVGLINQ 427
           ++LVCIDIDP+ETENFA+SL+ LAC+REV+++FN+FQEWL RHGPFDAVIDGANVGL+NQ
Sbjct: 367 ERLVCIDIDPRETENFASSLSNLACQREVRSDFNKFQEWLGRHGPFDAVIDGANVGLVNQ 426

Query: 428 HHFSFIQIRMSVSR 436
           H+FSF Q+   V+R
Sbjct: 427 HNFSFYQLNTVVNR 436

The following BLAST results are available for this feature:

BLAST of Carg17788 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960768.1	1.6e-218	99.08	proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita moschata]	[more]
XP_022988265.1	3.8e-212	87.30	proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita maxima]	[more]
XP_023516015.1	6.4e-212	72.28	proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo...	[more]
XP_022159393.1	3.8e-172	71.82	proteinaceous RNase P 1, chloroplastic/mitochondrial-like, partial [Momordica ch...	[more]
XP_004142562.1	2.2e-167	78.06	PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus...	[more]

BLAST of Carg17788 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32230.1	2.5e-125	66.98	proteinaceous RNase P 1	[more]
AT2G16650.1	3.0e-70	44.20	proteinaceous RNase P 2	[more]
AT4G21900.1	8.2e-68	44.06	proteinaceous RNase P 3	[more]
AT1G65380.1	1.1e-35	63.40	Leucine-rich repeat (LRR) family protein	[more]
AT5G60430.1	6.6e-25	41.46	drug transmembrane transporters;antiporters	[more]

BLAST of Carg17788 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q66GI4\|PRRP1_ARATH	4.5e-124	66.98	Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=...	[more]
sp\|Q680B9\|PRRP2_ARATH	5.4e-69	44.20	Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1	[more]
sp\|F4JKB6\|PRRP3_ARATH	1.5e-66	44.06	Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1	[more]
sp\|O80809\|CLV2_ARATH	1.9e-34	63.40	Receptor-like protein CLAVATA2 OS=Arabidopsis thaliana OX=3702 GN=CLV2 PE=1 SV=1	[more]
sp\|Q940E8\|FEA2_MAIZE	4.5e-07	45.29	Leucine-rich repeat receptor-like protein FASCIATED EAR2 OS=Zea mays OX=4577 GN=...	[more]

BLAST of Carg17788 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B8R1\|A0A1S3B8R1_CUCME	2.5e-159	69.61	LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial-like O...	[more]
tr\|A0A0A0LY34\|A0A0A0LY34_CUCSA	1.7e-147	78.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659050 PE=4 SV=1	[more]
tr\|V4TLQ9\|V4TLQ9_9ROSI	2.4e-130	57.83	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031025mg PE=4 ...	[more]
tr\|A0A2H5NTK9\|A0A2H5NTK9_CITUN	2.4e-130	57.83	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073520 PE=4 SV=1	[more]
tr\|A0A067EQ41\|A0A067EQ41_CITSI	7.0e-130	57.60	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g007684mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013210	LRR_N_plant-typ
IPR031595	PRORP_C
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat
IPR033443	PPR_long
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf
IPR003591	Leu-rich_rpt_typical-subtyp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17788-RA	Carg17788-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 847..871 e-value: 21.0 score: 10.6 coord: 605..628 e-value: 46.0 score: 7.9 coord: 772..797 e-value: 51.0 score: 7.5 coord: 629..652 e-value: 30.0 score: 9.4 coord: 1129..1161 e-value: 260.0 score: 1.6 coord: 1082..1105 e-value: 88.0 score: 5.5 coord: 919..942 e-value: 150.0 score: 3.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 725..1176 e-value: 3.1E-105 score: 354.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 543..654 e-value: 2.0E-31 score: 110.4 coord: 655..724 e-value: 4.5E-15 score: 57.6
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 608..665 e-value: 5.9E-8 score: 32.3
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 681..702 e-value: 1.1 score: 9.9
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 825..847 score: 5.232
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 681..703 score: 5.394
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 607..629 score: 4.955
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 1131..1150 score: 5.009
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 750..761 score: 5.101
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 798..820 score: 5.171
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 849..872 score: 5.302
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 705..727 score: 5.356
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 774..795 score: 5.225
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 969..991 score: 5.725
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 631..652 score: 5.61
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 1084..1106 score: 7.435
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 1107..1129 score: 5.91
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 897..920 score: 5.217
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 921..942 score: 6.056
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 873..894 score: 4.793
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 97..311 e-value: 1.1E-76 score: 256.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 113..138 e-value: 0.0028 score: 15.7
None	No IPR available	GENE3D	G3DSA:3.40.50.11980		coord: 373..435 e-value: 1.0E-17 score: 66.2
None	No IPR available	PANTHER	PTHR43887	FAMILY NOT NAMED	coord: 825..1011 coord: 528..720 coord: 1058..1169 coord: 655..889
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 1058..1145 coord: 796..1014
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 541..815
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 105..372 e-value: 1.1E-58 score: 201.2
IPR031595	Protein-only RNase P, C-terminal	PFAM	PF16953	PRORP	coord: 351..430 e-value: 2.6E-20 score: 72.9
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 541..577 e-value: 6.2E-8 score: 32.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17788	Cla009578	Watermelon (97103) v1	carwmB0970
Carg17788	Csa1G659050	Cucumber (Chinese Long) v2	carcuB0982
Carg17788	MELO3C010071	Melon (DHL92) v3.5.1	carmeB0946
Carg17788	ClCG03G010870	Watermelon (Charleston Gray)	carwcgB0945
Carg17788	CSPI01G32430	Wild cucumber (PI 183967)	carcpiB1005
Carg17788	Cucsa.356810	Cucumber (Gy14) v1	carcgyB1085
Carg17788	CmaCh11G009450	Cucurbita maxima (Rimu)	carcmaB1336
Carg17788	CmaCh10G008260	Cucurbita maxima (Rimu)	carcmaB1335
Carg17788	CmoCh10G008530	Cucurbita moschata (Rifu)	carcmoB1297
Carg17788	Lsi06G007100	Bottle gourd (USVL1VR-Ls)	carlsiB886
Carg17788	Cp4.1LG18g02620	Cucurbita pepo (Zucchini)	carcpeB1341
Carg17788	CsGy1G031320	Cucumber (Gy14) v2	carcgybB0955
Carg17788	MELO3C010072.2	Melon (DHL92) v3.6.1	carmedB0952
Carg17788	CsaV3_1G044620	Cucumber (Chinese Long) v3	carcucB1010
Carg17788	Cla97C03G061430	Watermelon (97103) v2	carwmbB1021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17788	Cucurbita moschata (Rifu)	carcmoB1298
Carg17788	Cucurbita pepo (Zucchini)	carcpeB1340