Carg17736 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17736
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein EARLY RESPONSIVE TO DEHYDRATION 15-like
Location	Cucurbita_argyrosperma_scaffold_082 : 275268 .. 276187 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGATCAAACTCTGTTTTTTTAAGTGTGTTTGTTAATTAACTATTAAGAACTTACTATACTGCGATTTATACACTTTCCTTCGAAGTTCATCAAGCTTAGAGTTCCCCTTAAGAGGGAGATTGTAATATTCTTTGATAGTGTTTTGGAGCTTTATGTCTATTGAACTTTAGTATAATTCTGTAACCAGTTATATCAATTAAACTTGCTTTGCATAGCTTAATCACTGCTCTACTTTGGTGGATATCTCATACGGTTTACTCAATCAAGTATTATGCATCCGAAAAATTCCAGGTTTGTGGTCTGTTAAGGCTTGTAGAGCTTCTGTTGGTTGAAAGAATTGGATGATTTAGAGTAAGAATGACATTATTATCTGGAAGAAGTTTTTCGTTGAACCCCAATGCTCCAATCTTCGTTCCTTTTGCTTTTCGCAACGTCGAGGATTTCTCTCCAGAATGGTGGGAACTAGTCAAGACATCACCGTGGTTCCGGGATTATTGGCTAAGCCAACATCAGGAAGATGATTTCGATAGCGTTTCCGATGAGATAGTCACTACAGAAGAGTTCCTTGATCTGGAAGAAATGGAGTTTGAGGCTATGGTTCTATCAAATGAAGCTGATCAGAAGCCTGAAGTCAAACCAACGGCTCATAAGAACCACATTAAAGGTATGCCCTTCATCTTATAAGTTTATTAAAGGAGTATAAATTGAGTACAAGAACCTGACCCTTTCATAATTGGACTTTGATAGTTGCAAGTAATGAAATGTCTGCCAAAAAAGTATTGGAGGATCTAATCATTCAGAATTCTCCGAAGAAGAATGGTCCAAAGTCTCCAGTTAGTCCTGCAAAGTTCAATGAGAAGCCAGCCAAGTGTGTGAGCCCGAAGCACGCTCCAAGGTTCATTCACCAGCCTCGTTGA

mRNA sequence

TAAAGATCAAACTCTGTTTTTTTAAGTGTGTTTGTTAATTAACTATTAAGAACTTACTATACTGCGATTTATACACTTTCCTTCGAAGTTCATCAAGCTTAGAGTTCCCCTTAAGAGGGAGATTGTAATATTCTTTGATAGTGTTTTGGAGCTTTATGTCTATTGAACTTTAGTATAATTCTGTAACCAGTTATATCAATTAAACTTGCTTTGCATAGCTTAATCACTGCTCTACTTTGGTGGATATCTCATACGGTTTACTCAATCAAGTATTATGCATCCGAAAAATTCCAGGTTTGTGGTCTGTTAAGGCTTGTAGAGCTTCTGTTGGTTGAAAGAATTGGATGATTTAGAGTAAGAATGACATTATTATCTGGAAGAAGTTTTTCGTTGAACCCCAATGCTCCAATCTTCGTTCCTTTTGCTTTTCGCAACGTCGAGGATTTCTCTCCAGAATGGTGGGAACTAGTCAAGACATCACCGTGGTTCCGGGATTATTGGCTAAGCCAACATCAGGAAGATGATTTCGATAGCGTTTCCGATGAGATAGTCACTACAGAAGAGTTCCTTGATCTGGAAGAAATGGAGTTTGAGGCTATGGTTCTATCAAATGAAGCTGATCAGAAGCCTGAAGTCAAACCAACGGCTCATAAGAACCACATTAAAGTTGCAAGTAATGAAATGTCTGCCAAAAAAGTATTGGAGGATCTAATCATTCAGAATTCTCCGAAGAAGAATGGTCCAAAGTCTCCAGTTAGTCCTGCAAAGTTCAATGAGAAGCCAGCCAAGTGTGTGAGCCCGAAGCACGCTCCAAGGTTCATTCACCAGCCTCGTTGA

Coding sequence (CDS)

ATGACATTATTATCTGGAAGAAGTTTTTCGTTGAACCCCAATGCTCCAATCTTCGTTCCTTTTGCTTTTCGCAACGTCGAGGATTTCTCTCCAGAATGGTGGGAACTAGTCAAGACATCACCGTGGTTCCGGGATTATTGGCTAAGCCAACATCAGGAAGATGATTTCGATAGCGTTTCCGATGAGATAGTCACTACAGAAGAGTTCCTTGATCTGGAAGAAATGGAGTTTGAGGCTATGGTTCTATCAAATGAAGCTGATCAGAAGCCTGAAGTCAAACCAACGGCTCATAAGAACCACATTAAAGTTGCAAGTAATGAAATGTCTGCCAAAAAAGTATTGGAGGATCTAATCATTCAGAATTCTCCGAAGAAGAATGGTCCAAAGTCTCCAGTTAGTCCTGCAAAGTTCAATGAGAAGCCAGCCAAGTGTGTGAGCCCGAAGCACGCTCCAAGGTTCATTCACCAGCCTCGTTGA

Protein sequence

MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVSDEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR

Homology

[Close]

BLAST of Carg17736 vs. NCBI nr
Match: XP_023525761.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo] >XP_023525772.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.0 bits (811), Expect = 3.6e-83
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           DEIV TEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIK ASNEMSAKKVLEDLIIQ
Sbjct: 61  DEIVATEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKAASNEMSAKKVLEDLIIQ 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR
Sbjct: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 158

[Close]

BLAST of Carg17736 vs. NCBI nr
Match: XP_022963214.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_022963222.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 1.4e-82
Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           DEIV TEEFLDLEEMEFEAMVL NEADQKPEVKPTAHKNHIK ASNEMSAKKVLEDLIIQ
Sbjct: 61  DEIVATEEFLDLEEMEFEAMVLPNEADQKPEVKPTAHKNHIKAASNEMSAKKVLEDLIIQ 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR
Sbjct: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 158

[Close]

BLAST of Carg17736 vs. NCBI nr
Match: XP_022990671.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022990672.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 307.4 bits (786), Expect = 2.9e-80
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTS WF+DYWLSQHQEDDFDSVS
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSLWFQDYWLSQHQEDDFDSVS 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIK ASNEMSAKKVLEDLIIQ
Sbjct: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKAASNEMSAKKVLEDLIIQ 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPKKNGPKSP +PAKFNEKPAKCV PKHAPRFIHQPR
Sbjct: 121 NSPKKNGPKSPGNPAKFNEKPAKCVIPKHAPRFIHQPR 158

[Close]

BLAST of Carg17736 vs. NCBI nr
Match: XP_008465752.1 (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 7.1e-63
Identity = 122/158 (77.22%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGR+F+LNPNAPIF+PFA RNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRNFTLNPNAPIFIPFALRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSIT 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           D++VTTEEFL       EAM L  EAD++PEVKPTAHK   K ASNEM AKK+L+DL+I 
Sbjct: 61  DDLVTTEEFL-------EAMAL-YEADEEPEVKPTAHKILTKGASNEMDAKKLLKDLVIP 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPK  GPKSP+ PAK+NEKPAKC+SPKH PRFIHQPR
Sbjct: 121 NSPKNKGPKSPIGPAKYNEKPAKCMSPKHTPRFIHQPR 150

[Close]

BLAST of Carg17736 vs. NCBI nr
Match: XP_004140285.1 (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >KGN51100.1 hypothetical protein Csa_5G440140 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 120/158 (75.95%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGR+F+LNPNAPIF+PFA RNVEDFSPEWWELVKTS WFRDYWLSQHQEDDF+S++
Sbjct: 1   MTLLSGRNFTLNPNAPIFIPFAIRNVEDFSPEWWELVKTSSWFRDYWLSQHQEDDFESIN 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           D++ TTEEFL       EAM L  EAD+KPEVKPTAHKN  K ASNEM AKK+L+DL+I 
Sbjct: 61  DDLDTTEEFL-------EAMAL-YEADEKPEVKPTAHKNLTKGASNEMDAKKLLKDLVIP 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPK  GPKSP+ PAK++EKPAKC+SPKH PRFIHQPR
Sbjct: 121 NSPKNKGPKSPIGPAKYSEKPAKCMSPKHTPRFIHQPR 150

[Close]

BLAST of Carg17736 vs. TAIR10
Match: AT2G41430.1 (dehydration-induced protein (ERD15))

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-19
Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQE--DDF-- 60
           M ++SGR  +LNP+AP+F+P A R VEDFSPEWW+LV TS W+ DYW+SQ Q+  D F  
Sbjct: 1   MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 61  ----------DSVSDEIVTTEEFLDLEE-MEFEAMVLSNEADQKPEVKPTAHKNHIKVAS 120
                       V+D +  + +F D+E+  + +A       D +   +          A 
Sbjct: 61  NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQ----------AP 120

Query: 121 NEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPK--HAPRFIHQPR 159
           +E    K  E  +++ S     P+S V PAK+ EKPAK  + +   APR IHQPR
Sbjct: 121 SEFGFGKNGE--MVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Carg17736 vs. TAIR10
Match: AT4G14270.1 (Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.)

HSP 1 Score: 84.3 bits (207), Expect = 7.1e-17
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 7   RSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVSDEIVTT 66
           R  +LNPNAP+F P  FR VEDFSP+WW+LV TS WFRD+WLS + E++F       +  
Sbjct: 8   RLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEF-------LGG 67

Query: 67  EEFLDLEEMEFEAMVLSNEADQKPEVKPTAH-KNHIKVASN--EMSAKKVLEDLIIQNSP 126
           ++F  +EE EFE M+ S++     +    A   +++K+  N  E + +K+    +   SP
Sbjct: 68  DDFSVMEE-EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSP 125

Query: 127 KKNGPK 130
           K N  K
Sbjct: 128 KYNQKK 125

[Close]

BLAST of Carg17736 vs. Swiss-Prot
Match: sp|Q39096|ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-18
Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQE--DDF-- 60
           M ++SGR  +LNP+AP+F+P A R VEDFSPEWW+LV TS W+ DYW+SQ Q+  D F  
Sbjct: 1   MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60

Query: 61  ----------DSVSDEIVTTEEFLDLEE-MEFEAMVLSNEADQKPEVKPTAHKNHIKVAS 120
                       V+D +  + +F D+E+  + +A       D +   +          A 
Sbjct: 61  NGENENGGGHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQ----------AP 120

Query: 121 NEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPK--HAPRFIHQPR 159
           +E    K  E  +++ S     P+S V PAK+ EKPAK  + +   APR IHQPR
Sbjct: 121 SEFGFGKNGE--MVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Carg17736 vs. Swiss-Prot
Match: sp|Q94AR4|CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 7   RSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVSDEIVTT 66
           R  +LNPNAP+F P  FR VEDFSP+WW+LV TS WFRD+WLS + E++F       +  
Sbjct: 8   RLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEF-------LGG 67

Query: 67  EEFLDLEEMEFEAMVLSNEADQKPEVKPTAH-KNHIKVASN--EMSAKKVLEDLIIQNSP 126
           ++F  +EE EFE M+ S++     +    A   +++K+  N  E + +K+    +   SP
Sbjct: 68  DDFSVMEE-EFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSP 125

Query: 127 KKNGPK 130
           K N  K
Sbjct: 128 KYNQKK 125

[Close]

BLAST of Carg17736 vs. TrEMBL
Match: tr|A0A1S3CR22|A0A1S3CR22_CUCME (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucumis melo OX=3656 GN=LOC103503358 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.7e-63
Identity = 122/158 (77.22%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGR+F+LNPNAPIF+PFA RNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRNFTLNPNAPIFIPFALRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSIT 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           D++VTTEEFL       EAM L  EAD++PEVKPTAHK   K ASNEM AKK+L+DL+I 
Sbjct: 61  DDLVTTEEFL-------EAMAL-YEADEEPEVKPTAHKILTKGASNEMDAKKLLKDLVIP 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPK  GPKSP+ PAK+NEKPAKC+SPKH PRFIHQPR
Sbjct: 121 NSPKNKGPKSPIGPAKYNEKPAKCMSPKHTPRFIHQPR 150

[Close]

BLAST of Carg17736 vs. TrEMBL
Match: tr|A0A0A0KN93|A0A0A0KN93_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440140 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.8e-62
Identity = 120/158 (75.95%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           MTLLSGR+F+LNPNAPIF+PFA RNVEDFSPEWWELVKTS WFRDYWLSQHQEDDF+S++
Sbjct: 1   MTLLSGRNFTLNPNAPIFIPFAIRNVEDFSPEWWELVKTSSWFRDYWLSQHQEDDFESIN 60

Query: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIKVASNEMSAKKVLEDLIIQ 120
           D++ TTEEFL       EAM L  EAD+KPEVKPTAHKN  K ASNEM AKK+L+DL+I 
Sbjct: 61  DDLDTTEEFL-------EAMAL-YEADEKPEVKPTAHKNLTKGASNEMDAKKLLKDLVIP 120

Query: 121 NSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           NSPK  GPKSP+ PAK++EKPAKC+SPKH PRFIHQPR
Sbjct: 121 NSPKNKGPKSPIGPAKYSEKPAKCMSPKHTPRFIHQPR 150

[Close]

BLAST of Carg17736 vs. TrEMBL
Match: tr|D7SQ18|D7SQ18_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g01660 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 81/173 (46.82%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60
           M L+SG   +LNPNAP+F+P AFR VEDFSPEWW+LVKTS WFRDYWLSQHQ+D+   V+
Sbjct: 1   MALVSGGRSTLNPNAPLFIPAAFRQVEDFSPEWWKLVKTSTWFRDYWLSQHQDDENFEVN 60

Query: 61  D--------------EIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHKNHIK-VAS 120
           D              ++   EE LDL E++ E ++  +E  +  E   T  K   K V  
Sbjct: 61  DGADDDVLNLLPETFDLGIDEESLDL-EVQMEELIQLSETKEGTESASTVSKTGRKPVNG 120

Query: 121 NEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
            ++  + ++++L + NSPK   PK+PV PAK++EK A+C+SPK+ PR I+QPR
Sbjct: 121 LKLETEALMKNLNLGNSPKGKSPKTPVGPAKYHEKAAQCMSPKYGPRRINQPR 172

[Close]

BLAST of Carg17736 vs. TrEMBL
Match: tr|A0A2P4HIL1|A0A2P4HIL1_QUESU (Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_77658 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 80/168 (47.62%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFD-SV 60
           M L+SG+  +LNPNAP F+P  F  VEDFS EWWELVKTS WFRD+WLSQHQ+DDF+ ++
Sbjct: 1   MALVSGQRSTLNPNAPPFIPATFYQVEDFSSEWWELVKTSTWFRDFWLSQHQDDDFEGNI 60

Query: 61  SDEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVK--------PTAHKNHIKVASN-EMSA 120
             +    E+  D+   E +   LS   +  P  K        PTA KN     +  E   
Sbjct: 61  EVDTADAEDNDDVSIDEAQLTELSQLEEIYPSYKDIGNTGLFPTAPKNESTPLNGIEEDT 120

Query: 121 KKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           K  L+ L +  SPK+ GPKSP  PAK+ +KP + VSPK  PR IHQPR
Sbjct: 121 KAFLKKLSVSKSPKERGPKSPAGPAKYQQKPVRYVSPKCTPRLIHQPR 168

[Close]

BLAST of Carg17736 vs. TrEMBL
Match: tr|A0A2P4MEF3|A0A2P4MEF3_QUESU (Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_42754 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 80/168 (47.62%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFD-SV 60
           M L+SG+  +LNPNAP F+P  F  VEDFS EWWELVKTS WFRD+WLSQHQ+DDF+ ++
Sbjct: 1   MALVSGQRSTLNPNAPPFIPATFYQVEDFSSEWWELVKTSTWFRDFWLSQHQDDDFEGNI 60

Query: 61  SDEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVK--------PTAHKNHIKVASN-EMSA 120
             +    E+  D+   E +   LS   +  P  K        PTA KN     +  E   
Sbjct: 61  EVDTADAEDNDDVSIDEAQLTELSQLEEIYPSYKDIGNTGLFPTAPKNESTPLNGFEEDT 120

Query: 121 KKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQPR 159
           K  L+ L +  SPK+ GPKSP  PAK+ +KP + VSPK  PR IHQPR
Sbjct: 121 KAFLKKLSVSKSPKERGPKSPAGPAKYQQKPVRYVSPKCTPRLIHQPR 168

The following BLAST results are available for this feature:

BLAST of Carg17736 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525761.1	3.6e-83	98.73	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022963214.1	1.4e-82	98.10	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_0229632...	[more]
XP_022990671.1	2.9e-80	96.20	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022990672...	[more]
XP_008465752.1	7.1e-63	77.22	PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis melo]	[more]
XP_004140285.1	1.3e-61	75.95	PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >KG...	[more]

BLAST of Carg17736 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41430.1	3.4e-19	37.71	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	7.1e-17	39.68	Protein containing PAM2 motif which mediates interaction with the PABC domain of...	[more]

BLAST of Carg17736 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39096\|ERD15_ARATH	6.2e-18	37.71	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
sp\|Q94AR4\|CID2_ARATH	1.3e-15	39.68	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Carg17736 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CR22\|A0A1S3CR22_CUCME	4.7e-63	77.22	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KN93\|A0A0A0KN93_CUCSA	8.8e-62	75.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440140 PE=4 SV=1	[more]
tr\|D7SQ18\|D7SQ18_VITVI	3.3e-32	46.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g01660 PE=4 SV=...	[more]
tr\|A0A2P4HIL1\|A0A2P4HIL1_QUESU	1.8e-30	47.62	Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_77...	[more]
tr\|A0A2P4MEF3\|A0A2P4MEF3_QUESU	1.8e-30	47.62	Protein early responsive to dehydration 15 OS=Quercus suber OX=58331 GN=CFP56_42...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17736-RA	Carg17736-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..158
None	No IPR available	PANTHER	PTHR33790	FAMILY NOT NAMED	coord: 1..158
None	No IPR available	PANTHER	PTHR33790:SF1	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2-RELATED	coord: 1..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17736	Cla005902	Watermelon (97103) v1	carwmB0472
Carg17736	Csa5G440140	Cucumber (Chinese Long) v2	carcuB0510
Carg17736	MELO3C005136	Melon (DHL92) v3.5.1	carmeB0483
Carg17736	ClCG01G007600	Watermelon (Charleston Gray)	carwcgB0462
Carg17736	CSPI05G15570	Wild cucumber (PI 183967)	carcpiB0515
Carg17736	CmaCh15G008270	Cucurbita maxima (Rimu)	carcmaB0664
Carg17736	CmaCh04G022040	Cucurbita maxima (Rimu)	carcmaB0665
Carg17736	CmoCh04G023060	Cucurbita moschata (Rifu)	carcmoB0648
Carg17736	CmoCh15G008560	Cucurbita moschata (Rifu)	carcmoB0647
Carg17736	Lsi09G008050	Bottle gourd (USVL1VR-Ls)	carlsiB433
Carg17736	Cp4.1LG01g19080	Cucurbita pepo (Zucchini)	carcpeB0670
Carg17736	CsGy5G015360	Cucumber (Gy14) v2	carcgybB0485
Carg17736	MELO3C005136.2	Melon (DHL92) v3.6.1	carmedB0487
Carg17736	CsaV3_5G024610	Cucumber (Chinese Long) v3	carcucB0514
Carg17736	Cla97C01G007940	Watermelon (97103) v2	carwmbB0501
Carg17736	Bhi12G000975	Wax gourd	carwgoB0581

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17736	Carg01378	Silver-seed gourd	carcarB469

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17736	Wax gourd	carwgoB0579
Carg17736	Cucurbita pepo (Zucchini)	carcpeB0669