Carg17666 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17666
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Peptidylprolyl isomerase
Location	Cucurbita_argyrosperma_scaffold_119 : 725949 .. 727517 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGAGATGAGATAACATATGATGTTAGTTTGAAGATTGAAGATAATGCCGTCGGAATAAGAGGAAAACGGCCATGCCATAGCGTTTTCCGCCATTGTATTTGCAGAAGATATGCTTATTCCTTGCTCAACGCCCTCTCTTACCTCCGCCCAATCTCTACCTTGTAAGTCCCCATTCCACTCCCCATCTTCTTCTATTTGCGCTGGAATGTACACAGATTTATACTCGCATTCTGGGTGTTTTCTATTTTTATATATTCACAATGAACCTTGCTATTACTTGATGGAGTTTGCTTGCGATGGATAGAACTCAGATTATCAATTTTCATGCGAATTTGCTTCGTATCATCTTGTTTTCTTTGCTTAAGAGTCGCTTGTAGAAGAGGACTGCGATTTATCGCCTTTATTGATCTCTCCTCCCCGTCTCCTCATTATTTCCTCATCTGCAAGTTCATTTTTCCGTAGTTTAGCTGCTCTAACCTATTCATTTACCAGAATATATATATATATATGTCTGCTTAAATTTTTAAGCTAGCCCAACAGATTAAACTCTTAAGTTCTGCGGTGATTTAATAAGAGTTCTTGTGTTTGAACTTGTAATTGTAATTTACTATCTAATCAAGGTTGACTTTCACTTTATGGATAAATTTTCAAACTCACAAATGAAGGGTGTGTTAAAATATTTATTTTATTATATGTACCACAATTGATTAGATTAAGTTTCTGGGTTAGTGGTGATTGTACAAGATAAAGTAGCAAGTTGACTGTTTGCCTCGTTGAATTGGGGAATATTGTATTGCTTCATCTCTACCTGTACCTTTGGTTTAATCAGTCAGTTGACGCCCTAGCAGACGTGGTGTTTTCAGCATGTCCAAAATCAAGAGCCTTCATAACTCAAATCAAGCAAGTACAGCGCTGCTGCTCATGTCATAGTTTCAATCACAGCAGGTTAGACTTTGAATATTGGTTGATGATTGTGTTCTGTATTTCACAGTGAAGAAGGTATTTTGAATTAGATAAGTGCTGACCAGAAAATTTTCCGTGCATGCTCAGTGGAGAGAATTCTTATATATCATCATCCAATGAGAATTCCAGGCGAAAGATTCTGCTATTTTTCTTATCAACTACAGGTTTATTTCCAACTCGGGATTCTTCTGCCAAGACAAAGCTCAAGAATCCATATGATGAAAGACGCTTACTAGAACAAAACAAAAGGAGGCAAAGAGAAAACAATGCACCTGATGACTTCCCAAGCTTTGTCCGAGAAGGTTCGTATCATGCTTCTATTCCTTAGCTGTATCAGGGTATCTTCAACGCATTGCCTTTCCAAATGTACCTGAAAAGAAAAGAGAGTAGAATTAAGCCAAATGTATATAAAAGATTACAGGTTTTCTAATGTGTGGCTCAGGTTTTGAGGTTAAGGTAATAGCACCGGAGACCTATGTAAAACGCGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTTGTGCTCTTTTCTTCACAATTCCAATATCTTTTCTCCAATTGTCTAG

mRNA sequence

ATAAGAGATGAGATAACATATGATGTTAGTTTGAAGATTGAAGATAATGCCGTCGGAATAAGAGGAAAACGGCCATGCCATAGCGTTTTCCGCCATTGTATTTGCAGAAGATATGCTTATTCCTTGCTCAACGCCCTCTCTTACCTCCGCCCAATCTCTACCTTTTGACGCCCTAGCAGACGTGGTGTTTTCAGCATGTCCAAAATCAAGAGCCTTCATAACTCAAATCAAGCAAGTACAGCGCTGCTGCTCATGTCATAGTTTCAATCACAGCAGTGGAGAGAATTCTTATATATCATCATCCAATGAGAATTCCAGGCGAAAGATTCTGCTATTTTTCTTATCAACTACAGGTTTATTTCCAACTCGGGATTCTTCTGCCAAGACAAAGCTCAAGAATCCATATGATGAAAGACGCTTACTAGAACAAAACAAAAGGAGGCAAAGAGAAAACAATGCACCTGATGACTTCCCAAGCTTTGTCCGAGAAGGTTTTGAGGTTAAGGTAATAGCACCGGAGACCTATGTAAAACGCGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTTGTGCTCTTTTCTTCACAATTCCAATATCTTTTCTCCAATTGTCTAG

Coding sequence (CDS)

ATGCTTATTCCTTGCTCAACGCCCTCTCTTACCTCCGCCCAATCTCTACCTTTTGACGCCCTAGCAGACGTGGTGTTTTCAGCATGTCCAAAATCAAGAGCCTTCATAACTCAAATCAAGCAAGTACAGCGCTGCTGCTCATGTCATAGTTTCAATCACAGCAGTGGAGAGAATTCTTATATATCATCATCCAATGAGAATTCCAGGCGAAAGATTCTGCTATTTTTCTTATCAACTACAGGTTTATTTCCAACTCGGGATTCTTCTGCCAAGACAAAGCTCAAGAATCCATATGATGAAAGACGCTTACTAGAACAAAACAAAAGGAGGCAAAGAGAAAACAATGCACCTGATGACTTCCCAAGCTTTGTCCGAGAAGGTTTTGAGGTTAAGGTAATAGCACCGGAGACCTATGTAAAACGCGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTTGTGCTCTTTTCTTCACAATTCCAATATCTTTTCTCCAATTGTCTAG

Protein sequence

MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSYISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDFPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFLHNSNIFSPIV

Homology

[Close]

BLAST of Carg17666 vs. NCBI nr
Match: XP_023529045.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 5.9e-82
Identity = 156/164 (95.12%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60
           MLIPCSTPSLTSAQSLP+     V FSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY
Sbjct: 1   MLIPCSTPSLTSAQSLPY-----VAFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60

Query: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120
           +SSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF
Sbjct: 61  VSSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120

Query: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 165
           PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV
Sbjct: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 159

[Close]

BLAST of Carg17666 vs. NCBI nr
Match: XP_022979534.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60
           ML+PCSTPSLTSAQSLP+     V FSACPKSRAFITQIKQVQRCCSCHSFNH+SGENSY
Sbjct: 1   MLVPCSTPSLTSAQSLPY-----VAFSACPKSRAFITQIKQVQRCCSCHSFNHTSGENSY 60

Query: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120
           ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF
Sbjct: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120

Query: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 165
           PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV
Sbjct: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 159

[Close]

BLAST of Carg17666 vs. NCBI nr
Match: XP_022924401.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 2.5e-80
Identity = 155/164 (94.51%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60
           MLIPCSTPSLTSAQSLP+     V FSACPKSRAFITQIKQVQRCCSCHSFNH SGENSY
Sbjct: 1   MLIPCSTPSLTSAQSLPY-----VAFSACPKSRAFITQIKQVQRCCSCHSFNHGSGENSY 60

Query: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120
           ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF
Sbjct: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120

Query: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 165
           PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGD PKDGQQV
Sbjct: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDFPKDGQQV 159

[Close]

BLAST of Carg17666 vs. NCBI nr
Match: XP_004133781.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus] >KGN56374.1 hypothetical protein Csa_3G118090 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 8.3e-68
Identity = 140/170 (82.35%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MLIPCSTPSLT-SAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENS 60
           MLI CSTPSLT SA SL + A     FS C  SRAFITQ KQVQR CSC SFNHSS ENS
Sbjct: 1   MLITCSTPSLTSSAHSLSYRA-----FSGCATSRAFITQTKQVQRYCSCQSFNHSSEENS 60

Query: 61  YISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDD 120
           YIS SNENSRRKILLFFLSTT LFPTR SSAKTK KNPYDERRLLEQNKRRQ+ENNAP D
Sbjct: 61  YISLSNENSRRKILLFFLSTTALFPTRHSSAKTKNKNPYDERRLLEQNKRRQKENNAPVD 120

Query: 121 FPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           FPSFVREGFEVKVIAPE+YVKRDSGLIYWDIEVGNGDCPKDGQQV+  ++
Sbjct: 121 FPSFVREGFEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYV 165

[Close]

BLAST of Carg17666 vs. NCBI nr
Match: XP_022153538.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 127/169 (75.15%), Postives = 137/169 (81.07%), Query Frame = 0


Query: 1   MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60
           ML+ CSTPSLTS Q LP  A+     S    SR F+ Q KQV+R CSCHSFNHS GENS+
Sbjct: 1   MLVTCSTPSLTSGQYLPHRAV-----STWTTSRDFMIQNKQVRRYCSCHSFNHSRGENSH 60

Query: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120
           IS S++N RRKIL FFLSTT LFPT  SSAKTK KNPYDERRLLEQNKR QRENNAPDDF
Sbjct: 61  ISFSDQNYRRKILQFFLSTTVLFPTWHSSAKTKSKNPYDERRLLEQNKRIQRENNAPDDF 120

Query: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           PSFVREGFEVKV+APETYVK DSGLIYWDIEVGNGD PKDGQQV   ++
Sbjct: 121 PSFVREGFEVKVVAPETYVKGDSGLIYWDIEVGNGDFPKDGQQVTFHYI 164

[Close]

BLAST of Carg17666 vs. TAIR10
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-31
Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 68  SRRKIL-LFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDFPSFVRE 127
           SRR ++ +   S   L P   SSAKTK K+PYDERRLLEQNKR QRENNAPD+FP+FVRE
Sbjct: 44  SRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQNKRIQRENNAPDEFPNFVRE 103

Query: 128 GFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           GFEVKV+A + Y+K DSGLIY D  VG GD PKDGQQV   ++
Sbjct: 104 GFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTFHYI 146

[Close]

BLAST of Carg17666 vs. Swiss-Prot
Match: sp|Q0WRJ7|FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-30
Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 68  SRRKIL-LFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDFPSFVRE 127
           SRR ++ +   S   L P   SSAKTK K+PYDERRLLEQNKR QRENNAPD+FP+FVRE
Sbjct: 44  SRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQNKRIQRENNAPDEFPNFVRE 103

Query: 128 GFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           GFEVKV+A + Y+K DSGLIY D  VG GD PKDGQQV   ++
Sbjct: 104 GFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTFHYI 146

[Close]

BLAST of Carg17666 vs. TrEMBL
Match: tr|A0A0A0L5Q7|A0A0A0L5Q7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G118090 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 5.5e-68
Identity = 140/170 (82.35%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MLIPCSTPSLT-SAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENS 60
           MLI CSTPSLT SA SL + A     FS C  SRAFITQ KQVQR CSC SFNHSS ENS
Sbjct: 1   MLITCSTPSLTSSAHSLSYRA-----FSGCATSRAFITQTKQVQRYCSCQSFNHSSEENS 60

Query: 61  YISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDD 120
           YIS SNENSRRKILLFFLSTT LFPTR SSAKTK KNPYDERRLLEQNKRRQ+ENNAP D
Sbjct: 61  YISLSNENSRRKILLFFLSTTALFPTRHSSAKTKNKNPYDERRLLEQNKRRQKENNAPVD 120

Query: 121 FPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           FPSFVREGFEVKVIAPE+YVKRDSGLIYWDIEVGNGDCPKDGQQV+  ++
Sbjct: 121 FPSFVREGFEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYV 165

[Close]

BLAST of Carg17666 vs. TrEMBL
Match: tr|A0A2I4EJQ9|A0A2I4EJQ9_9ROSI (Peptidylprolyl isomerase OS=Juglans regia OX=51240 GN=LOC108990198 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.2e-42
Identity = 94/164 (57.32%), Postives = 110/164 (67.07%), Query Frame = 0


Query: 1   MLIPCSTPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSY 60
           ML+ CS PS  S  + P   L     SA      F TQ KQ+  C S H     S + SY
Sbjct: 1   MLLTCSAPSFMSKPTFPHRTL-----SAGNVLGTFHTQKKQIVHCFSIHRLKDQSAKTSY 60

Query: 61  ISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDF 120
           +S  +EN RR++LLF   TT LFP   SS KTK KNPYDE+RLLEQNKR Q+ENNAP+DF
Sbjct: 61  LSYCDENLRRRLLLFVSVTTALFPALSSSGKTKSKNPYDEKRLLEQNKRVQKENNAPEDF 120

Query: 121 PSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQV 165
           P+F+REGF+V V+ PE Y+K DSGLIY D EVG GDCPKDGQQV
Sbjct: 121 PAFIREGFQVNVVTPENYIKSDSGLIYRDFEVGKGDCPKDGQQV 159

[Close]

BLAST of Carg17666 vs. TrEMBL
Match: tr|A0A061E2C8|A0A061E2C8_THECC (Peptidylprolyl isomerase OS=Theobroma cacao OX=3641 GN=TCM_005693 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.1e-39
Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 35  FITQIKQVQRCCSCHSFNHSSGENSYISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKL 94
           F TQ K+   CC  HS   +  +N Y+S    NS R+ LLF L ++GL PT  SS KTK 
Sbjct: 63  FSTQKKKNAFCCLSHSLKDNGVQNRYVSHQEGNSSRRFLLFLLVSSGLSPTLSSSGKTKS 122

Query: 95  KNPYDERRLLEQNKRRQRENNAPDDFPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGN 154
           KNPYDE+RLLEQNKRRQ+ENNAPDDFP+F+REGFEVKV+A E Y K DSGL+Y D EVG 
Sbjct: 123 KNPYDEKRLLEQNKRRQKENNAPDDFPNFIREGFEVKVVASEDYKKSDSGLVYRDYEVGK 182

Query: 155 GDCPKDGQQVLCSFL 170
           GDCPK GQQV   ++
Sbjct: 183 GDCPKAGQQVTFHYI 197

[Close]

BLAST of Carg17666 vs. TrEMBL
Match: tr|A0A061DUG5|A0A061DUG5_THECC (Peptidylprolyl isomerase OS=Theobroma cacao OX=3641 GN=TCM_005693 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.1e-39
Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 35  FITQIKQVQRCCSCHSFNHSSGENSYISSSNENSRRKILLFFLSTTGLFPTRDSSAKTKL 94
           F TQ K+   CC  HS   +  +N Y+S    NS R+ LLF L ++GL PT  SS KTK 
Sbjct: 24  FSTQKKKNAFCCLSHSLKDNGVQNRYVSHQEGNSSRRFLLFLLVSSGLSPTLSSSGKTKS 83

Query: 95  KNPYDERRLLEQNKRRQRENNAPDDFPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGN 154
           KNPYDE+RLLEQNKRRQ+ENNAPDDFP+F+REGFEVKV+A E Y K DSGL+Y D EVG 
Sbjct: 84  KNPYDEKRLLEQNKRRQKENNAPDDFPNFIREGFEVKVVASEDYKKSDSGLVYRDYEVGK 143

Query: 155 GDCPKDGQQVLCSFL 170
           GDCPK GQQV   ++
Sbjct: 144 GDCPKAGQQVTFHYI 158

[Close]

BLAST of Carg17666 vs. TrEMBL
Match: tr|A0A067JY72|A0A067JY72_JATCU (Peptidylprolyl isomerase OS=Jatropha curcas OX=180498 GN=JCGZ_14598 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.1e-39
Identity = 90/163 (55.21%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 7   TPSLTSAQSLPFDALADVVFSACPKSRAFITQIKQVQRCCSCHSFNHSSGENSYISSSNE 66
           T   +S   LP  +L     SA P S  F      + RC  CHSFN +S +N Y+    E
Sbjct: 4   TSQSSSPPPLPNLSLPHRTLSAFPTSGNFFASKGHIVRC--CHSFNDNSVQNGYVLHCEE 63

Query: 67  NSRRKILLFFLSTTGLFPTRDSSAKTKLKNPYDERRLLEQNKRRQRENNAPDDFPSFVRE 126
             RR+ LL F ++ GLF T  S  KTK KNPYDE+RLLEQN+R Q+ENNAP+DFPSF+RE
Sbjct: 64  KWRRRFLLLFSASLGLFQTLPSWGKTKNKNPYDEKRLLEQNRRIQKENNAPEDFPSFIRE 123

Query: 127 GFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVLCSFL 170
           GFEVKV+  E YVKRDSGLIY D EVG GDCPK GQQV   ++
Sbjct: 124 GFEVKVVTTENYVKRDSGLIYRDFEVGKGDCPKAGQQVTFHYI 164

The following BLAST results are available for this feature:

BLAST of Carg17666 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529045.1	5.9e-82	95.12	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita pepo subs...	[more]
XP_022979534.1	1.3e-81	94.51	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita maxima]	[more]
XP_022924401.1	2.5e-80	94.51	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita moschata]	[more]
XP_004133781.1	8.3e-68	82.35	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis ...	[more]
XP_022153538.1	2.2e-60	75.15	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Momordic...	[more]

BLAST of Carg17666 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60370.1	3.4e-31	65.05	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of Carg17666 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WRJ7\|FK202_ARATH	6.1e-30	65.05	Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of Carg17666 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5Q7\|A0A0A0L5Q7_CUCSA	5.5e-68	82.35	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G118090 PE=4 SV=1	[more]
tr\|A0A2I4EJQ9\|A0A2I4EJQ9_9ROSI	5.2e-42	57.32	Peptidylprolyl isomerase OS=Juglans regia OX=51240 GN=LOC108990198 PE=4 SV=1	[more]
tr\|A0A061E2C8\|A0A061E2C8_THECC	9.1e-39	61.48	Peptidylprolyl isomerase OS=Theobroma cacao OX=3641 GN=TCM_005693 PE=4 SV=1	[more]
tr\|A0A061DUG5\|A0A061DUG5_THECC	9.1e-39	61.48	Peptidylprolyl isomerase OS=Theobroma cacao OX=3641 GN=TCM_005693 PE=4 SV=1	[more]
tr\|A0A067JY72\|A0A067JY72_JATCU	9.1e-39	55.21	Peptidylprolyl isomerase OS=Jatropha curcas OX=180498 GN=JCGZ_14598 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023566	PPIase_FKBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17666-RA	Carg17666-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 38..167
None	No IPR available	PANTHER	PTHR10516:SF387	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC	coord: 38..167
None	No IPR available	SUPERFAMILY	SSF54534	FKBP-like	coord: 83..168

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17666	Lsi05G021810	Bottle gourd (USVL1VR-Ls)	carlsiB119
Carg17666	CsGy3G007570	Cucumber (Gy14) v2	carcgybB0143

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17666	Wax gourd	carwgoB0166
Carg17666	Cucumber (Gy14) v1	carcgyB0165
Carg17666	Cucurbita maxima (Rimu)	carcmaB0173
Carg17666	Cucurbita maxima (Rimu)	carcmaB0176
Carg17666	Cucurbita maxima (Rimu)	carcmaB0177
Carg17666	Cucurbita moschata (Rifu)	carcmoB0182
Carg17666	Cucurbita moschata (Rifu)	carcmoB0185
Carg17666	Cucurbita pepo (Zucchini)	carcpeB0192
Carg17666	Cucurbita pepo (Zucchini)	carcpeB0194
Carg17666	Wild cucumber (PI 183967)	carcpiB0149
Carg17666	Cucumber (Chinese Long) v2	carcuB0145
Carg17666	Cucumber (Chinese Long) v3	carcucB0153
Carg17666	Melon (DHL92) v3.5.1	carmeB0138
Carg17666	Melon (DHL92) v3.6.1	carmedB0142
Carg17666	Watermelon (Charleston Gray)	carwcgB0128
Carg17666	Watermelon (97103) v1	carwmB0130
Carg17666	Watermelon (97103) v2	carwmbB0138