Carg17610 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17610
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat
Location	Cucurbita_argyrosperma_scaffold_119 : 92724 .. 94247 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACATTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTCCGTCTGATGCAGCTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGCTGATGGATATGTATGCAAAATGTGGACATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAGGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCAGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACATTACGGGTGCATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATTCAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTTTGGGGAATCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGTGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACCTCCAAATTGGTGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTGTATTTCTAA

mRNA sequence

ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACATTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTCCGTCTGATGCAGCTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGCTGATGGATATGTATGCAAAATGTGGACATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAGGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCAGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACATTACGGGTGCATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATTCAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTTTGGGGAATCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGTGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACCTCCAAATTGGTGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTGTATTTCTAA

Coding sequence (CDS)

ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACATTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTCCGTCTGATGCAGCTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGCTGATGGATATGTATGCAAAATGTGGACATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAGGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCAGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACATTACGGGTGCATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATTCAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTTTGGGGAATCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGTGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACCTCCAAATTGGTGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTGTATTTCTAA

Protein sequence

MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELERHSGAYVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTHLQIGDIHLVLEELNKQISQPDLLYF

Homology

[Close]

BLAST of Carg17610 vs. NCBI nr
Match: XP_022951910.1 (pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita moschata])

HSP 1 Score: 731.1 bits (1886), Expect = 2.6e-207
Identity = 479/507 (94.48%), Postives = 482/507 (95.07%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPY+LKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX
Sbjct: 138 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGAL+LFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAE  
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEXX 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           XXXXXXXXX                 RVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK
Sbjct: 438 XXXXXXXXXXXXXXXXXXXXXXXXXXRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDLLYF 508
           TH+QI DIHLVLEELNKQISQPDLLYF
Sbjct: 498 THIQIDDIHLVLEELNKQISQPDLLYF 524

[Close]

BLAST of Carg17610 vs. NCBI nr
Match: XP_022973287.1 (pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 2.0e-196
Identity = 460/507 (90.73%), Postives = 473/507 (93.29%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MKQLKQAHAQVLTSGLGSNSFALSR+LDFCAEPRHGSLSHALKL++HIQHPTICICNTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KAFLLRGEFLNAIV+YSAMRRN IAPDSYTHPY+LKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78  KAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           +DVFVGNSLLVMYCAFGNM+DAGQ+FDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX
Sbjct: 138 MDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALD+GI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDVGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTR+LFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGAL+LFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKM TIHK        
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMSTIHKXXXXXXXX 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           XXXXXXXXX                 RVRKMMKLKGVEKVPGCSSIK+NGVVTEFIAGDK
Sbjct: 438 XXXXXXXXXXXXXXXXXXXXXXXXXXRVRKMMKLKGVEKVPGCSSIKVNGVVTEFIAGDK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDLLYF 508
           THLQIGDIHLVLE L+KQISQPD LYF
Sbjct: 498 THLQIGDIHLVLEVLSKQISQPDRLYF 524

[Close]

BLAST of Carg17610 vs. NCBI nr
Match: XP_016903441.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis melo])

HSP 1 Score: 620.9 bits (1600), Expect = 3.8e-174
Identity = 351/504 (69.64%), Postives = 388/504 (76.98%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M  LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAIV++SAM RN I PD+YT PY+LKA AR+   HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELSAVSWTVMI   XXXXXXXXXXXXXXXX
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA++LF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GC+ID                                                       
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSNMYAALG H DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDL 505
           TH  IG+IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521

[Close]

BLAST of Carg17610 vs. NCBI nr
Match: XP_004143828.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X1 [Cucumis sativus] >KGN51188.1 hypothetical protein Csa_5G485180 [Cucumis sativus])

HSP 1 Score: 616.3 bits (1588), Expect = 9.2e-173
Identity = 350/504 (69.44%), Postives = 389/504 (77.18%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M QLKQAHAQVL SGL +++F LSRLL+FCAE R+GSLSHA KL++HIQHPTICI NTMI
Sbjct: 18  MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAI ++SA+ RN I PD+YT PY+LKA AR+   HLGES+HAC +KLG  
Sbjct: 78  KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           ++ FVGNSLLVMY +F NMR A QVFDEMPELSAVSWTVMI  XXXXXXXXXXXXXXXXX
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGXXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA++LF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M T+HKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GC+ID                                                       
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSNMYAALG H DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDL 505
           TH  I +IHLVLEELNKQI + DL
Sbjct: 498 THRHIDNIHLVLEELNKQIVEADL 521

[Close]

BLAST of Carg17610 vs. NCBI nr
Match: XP_023537919.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 9.0e-152
Identity = 368/507 (72.58%), Postives = 372/507 (73.37%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKL++HIQHPTICICNTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KAFLL                                                       
Sbjct: 78  KAFLL------------------------------------------------------- 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
                              RDAGQVFDEMPELSAVSWTVMI                   
Sbjct: 138 -------------------RDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
                            NNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGAL+LFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAE  
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEXX 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           XXXXXXXXX                 RVRKMMKLKGVEKVPGCSSIK+NGVVTEFIAGDK
Sbjct: 438 XXXXXXXXXXXXXXXXXXXXXXXXXXRVRKMMKLKGVEKVPGCSSIKVNGVVTEFIAGDK 450

Query: 481 THLQIGDIHLVLEELNKQISQPDLLYF 508
           THLQIGDIHLVLEELNKQIS PDLLYF
Sbjct: 498 THLQIGDIHLVLEELNKQISHPDLLYF 450

[Close]

BLAST of Carg17610 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 245.4 bits (625), Expect = 7.8e-65
Identity = 150/509 (29.47%), Postives = 247/509 (48.53%), Query Frame = 0


Query: 3   QLKQAHAQVLTSGL-GSNSFALSRLLDFCAEPR-HGSLSHALKLYRHIQHPTICICNTMI 62
           + KQ HA+ +   L  S+SF+ S +L  CA      S+++A  ++R I  P     NTMI
Sbjct: 45  EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMI 104

Query: 63  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 122
           + ++    F  A+  Y+ M +    PD++T+P +LKAC R+K    G+ +H    KLG  
Sbjct: 105 RGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164

Query: 123 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 182
            DVFV NSL+ MY   G M  +  VF+++   +A SW+ M+                   
Sbjct: 165 ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM------------- 224

Query: 183 XXXXXXXXXXXXXXXXXNNCFKEGLHMFR-LMQLTEVEPDEAIIVTILCACAHMGALDIG 242
                               + E L +FR +   T ++ +E+ +V+ L ACA+ GAL++G
Sbjct: 225 ------------------GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 284

Query: 243 IWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMH 302
           + IH +L      L + V T L+DMY KCG LD   H+F +M +R+ + ++ MISG+A+H
Sbjct: 285 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 344

Query: 303 GDGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEH 362
           G+GE ALR+F +M K  ++PD + ++++L ACS+SG+  EG ++  +M    K+EP AEH
Sbjct: 345 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 404

Query: 363 YGCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 422
           YGC++D                                                      
Sbjct: 405 YGCLVD---LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELL 464

Query: 423 XXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 482
                     +L+SN+Y+      D  R R  + +KG+++ PG S ++L G    F++ D
Sbjct: 465 KLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQD 519

Query: 483 KTHLQIGDIHLVLEELNKQIS----QPDL 505
           ++H +  +I+ +L ++  Q+      PDL
Sbjct: 525 RSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519

[Close]

BLAST of Carg17610 vs. TAIR10
Match: AT2G20540.1 (mitochondrial editing factor 21)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-64
Identity = 178/490 (36.33%), Postives = 266/490 (54.29%), Query Frame = 0


Query: 5   KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
           K+ +A ++  GL  +SF +++++DFC   +   + +A +L+  + +P + + N++I+A+ 
Sbjct: 27  KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86

Query: 65  LRGEFLNAIVIYSAMRRNEI-APDSYTHPYILKACARIKKFHLGESVHACAVKLGFVLDV 124
               + + I IY  + R     PD +T P++ K+CA +   +LG+ VH    K G    V
Sbjct: 87  HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146

Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXXXXX 184
              N+L+ MY  F ++ DA +VFDEM E          XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206

Query: 185 XXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
           XXXXXXXXXXXXXX             MQL  +EPDE  ++++L +CA +G+L++G WIH
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXEMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266

Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
            Y           V   L++MY+KCG +     LF +M  +D I W+ MISG A HG+  
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326

Query: 305 GALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
           GA+  F EM++A++KP+ ITF+ +L+ACS+ GM  EGL+  + M   ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386

Query: 365 IDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           ID                                                          
Sbjct: 387 ID---VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP 446

Query: 425 XXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTHL 484
                 VLL+N+YA LG   D  R+RKM++ + ++K PG S I++N +V EF++GD +  
Sbjct: 447 EDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 506

Query: 485 QIGDIHLVLE 494
              +I +VL+
Sbjct: 507 FWTEISIVLQ 511

[Close]

BLAST of Carg17610 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-64
Identity = 166/599 (27.71%), Postives = 254/599 (42.40%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
           ++ L+  HAQ++  GL + ++ALS+L++FC   P    L +A+ +++ IQ P + I NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGF 120
            +   L  + ++A+ +Y  M    + P+SYT P++LK+CA+ K F  G+ +H   +KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPE---------------------------- 180
            LD++V  SL+ MY   G + DA +VFD+ P                             
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 225

Query: 181 --------------------------------------------LSAVS----------- 240
                                                       ++ VS           
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 -----W-------------TVMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 300
                W               +I                                     
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 NCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
           N +KE L +F+ M  +   P++  +++IL ACAH+GA+DIG WIH Y+      +T   S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALRLFKEMEKAR 420
             T L+DMYAKCG ++    +F+ +  +    WN MI G AMHG  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDXXXXXXXXXXX 480
           I+PDDITF+ +L+ACS+SGM + G  I   M   +K+ PK EHYGC+ID           
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID---LLGHSGLF 525

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLSNMY 496
                                                                VLLSN+Y
Sbjct: 526 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 585

[Close]

BLAST of Carg17610 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-59
Identity = 155/516 (30.04%), Postives = 234/516 (45.35%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGL---GSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICN 60
           M QLKQ HA  L +      +  F   ++L   +      +++A +++  I++ +  + N
Sbjct: 61  MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSS--FSDVNYAFRVFDSIENHSSFMWN 120

Query: 61  TMIKAF---LLRGEFLNAIVIYSAM-RRNEIAPDSYTHPYILKACARIKKFHLGESVHAC 120
           T+I+A    + R E   A ++Y  M  R E +PD +T P++LKACA I  F  G+ VH  
Sbjct: 121 TLIRACAHDVSRKE--EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 180

Query: 121 AVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXX 180
            VK GF  DV+V N L+ +Y + G +  A +VFDEMPE S VSW  MI            
Sbjct: 181 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE---- 240

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHM 240
                                      +   L +FR MQ    EPD   + ++L ACA +
Sbjct: 241 ---------------------------YDSALQLFREMQ-RSFEPDGYTMQSVLSACAGL 300

Query: 241 GALDIGIWIHRYL---SHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWN 300
           G+L +G W H +L     +++ + + V   L++MY KCG L M   +F  M +RD   WN
Sbjct: 301 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 360

Query: 301 VMISGMAMHGDGEGALRLFKEM--EKARIKPDDITFIAILAACSNSGMANEGLKILNKMC 360
            MI G A HG  E A+  F  M  ++  ++P+ +TF+ +L AC++ G  N+G +  + M 
Sbjct: 361 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 420

Query: 361 TIHKIEPKAEHYGCIID-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
             + IEP  EHYGCI+D                                           
Sbjct: 421 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 480

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGC 480
                                     VLLS +YA+     D   VRK+M   G+ K PGC
Sbjct: 481 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 540

Query: 481 SSIKLNGVVTEFIAGDKTHLQIGDIHLVLEELNKQI 500
           SSI++NG+  EF AGD +H Q   I+  L+ ++ ++
Sbjct: 541 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRL 540

[Close]

BLAST of Carg17610 vs. TAIR10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-59
Identity = 152/504 (30.16%), Postives = 244/504 (48.41%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           +K LKQ+H  ++ +GL  ++  +++ ++ C+   H  L +A  ++ H   P   + NTMI
Sbjct: 28  LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87

Query: 61  KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKL 120
           +A  L  E      AI +Y  +      PD++T P++LK   R+     G  +H   V  
Sbjct: 88  RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147

Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMI--XXXXXXXXXXXXXX 180
           GF   V V   L+ MY + G + DA ++FDEM       W  ++                
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207

Query: 181 XXXXXXXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
                      XXXXXXXXXXX          F+ M +  VEPDE  ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVXXXXXXXXXXXXXXXXXXXXXFQRMLMENVEPDEVTLLAVLSACADLGS 267

Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
           L++G  I  Y+ H  +   + ++  ++DMYAK G++     +F+ + +R+ + W  +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327

Query: 301 MAMHGDGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
           +A HG G  AL +F  M KA ++P+D+TFIAIL+ACS+ G  + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387

Query: 361 KAEHYGCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
             EHYGC+ID                                                  
Sbjct: 388 NIEHYGCMID---LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 447

Query: 421 XXXXXXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEF 480
                         +LL+N+Y+ LG   +++ +R MMK  GV+K+ G SSI++   V +F
Sbjct: 448 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 507

Query: 481 IAGDKTHLQIGDIHLVLEELNKQI 500
           I+GD TH Q+  IH +L+E++ QI
Sbjct: 508 ISGDLTHPQVERIHEILQEMDLQI 526

[Close]

BLAST of Carg17610 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-63
Identity = 150/509 (29.47%), Postives = 247/509 (48.53%), Query Frame = 0


Query: 3   QLKQAHAQVLTSGL-GSNSFALSRLLDFCAEPR-HGSLSHALKLYRHIQHPTICICNTMI 62
           + KQ HA+ +   L  S+SF+ S +L  CA      S+++A  ++R I  P     NTMI
Sbjct: 45  EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMI 104

Query: 63  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 122
           + ++    F  A+  Y+ M +    PD++T+P +LKAC R+K    G+ +H    KLG  
Sbjct: 105 RGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164

Query: 123 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 182
            DVFV NSL+ MY   G M  +  VF+++   +A SW+ M+                   
Sbjct: 165 ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM------------- 224

Query: 183 XXXXXXXXXXXXXXXXXNNCFKEGLHMFR-LMQLTEVEPDEAIIVTILCACAHMGALDIG 242
                               + E L +FR +   T ++ +E+ +V+ L ACA+ GAL++G
Sbjct: 225 ------------------GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 284

Query: 243 IWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMH 302
           + IH +L      L + V T L+DMY KCG LD   H+F +M +R+ + ++ MISG+A+H
Sbjct: 285 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 344

Query: 303 GDGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEH 362
           G+GE ALR+F +M K  ++PD + ++++L ACS+SG+  EG ++  +M    K+EP AEH
Sbjct: 345 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 404

Query: 363 YGCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 422
           YGC++D                                                      
Sbjct: 405 YGCLVD---LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELL 464

Query: 423 XXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 482
                     +L+SN+Y+      D  R R  + +KG+++ PG S ++L G    F++ D
Sbjct: 465 KLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQD 519

Query: 483 KTHLQIGDIHLVLEELNKQIS----QPDL 505
           ++H +  +I+ +L ++  Q+      PDL
Sbjct: 525 RSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519

[Close]

BLAST of Carg17610 vs. Swiss-Prot
Match: sp|Q9SIL5|PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.4e-63
Identity = 178/490 (36.33%), Postives = 266/490 (54.29%), Query Frame = 0


Query: 5   KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
           K+ +A ++  GL  +SF +++++DFC   +   + +A +L+  + +P + + N++I+A+ 
Sbjct: 27  KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86

Query: 65  LRGEFLNAIVIYSAMRRNEI-APDSYTHPYILKACARIKKFHLGESVHACAVKLGFVLDV 124
               + + I IY  + R     PD +T P++ K+CA +   +LG+ VH    K G    V
Sbjct: 87  HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146

Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXXXXX 184
              N+L+ MY  F ++ DA +VFDEM E          XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206

Query: 185 XXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
           XXXXXXXXXXXXXX             MQL  +EPDE  ++++L +CA +G+L++G WIH
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXEMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266

Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
            Y           V   L++MY+KCG +     LF +M  +D I W+ MISG A HG+  
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326

Query: 305 GALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
           GA+  F EM++A++KP+ ITF+ +L+ACS+ GM  EGL+  + M   ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386

Query: 365 IDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           ID                                                          
Sbjct: 387 ID---VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP 446

Query: 425 XXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTHL 484
                 VLL+N+YA LG   D  R+RKM++ + ++K PG S I++N +V EF++GD +  
Sbjct: 447 EDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 506

Query: 485 QIGDIHLVLE 494
              +I +VL+
Sbjct: 507 FWTEISIVLQ 511

[Close]

BLAST of Carg17610 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.0e-63
Identity = 166/599 (27.71%), Postives = 254/599 (42.40%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
           ++ L+  HAQ++  GL + ++ALS+L++FC   P    L +A+ +++ IQ P + I NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGF 120
            +   L  + ++A+ +Y  M    + P+SYT P++LK+CA+ K F  G+ +H   +KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPE---------------------------- 180
            LD++V  SL+ MY   G + DA +VFD+ P                             
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 225

Query: 181 --------------------------------------------LSAVS----------- 240
                                                       ++ VS           
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 -----W-------------TVMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 300
                W               +I                                     
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 NCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
           N +KE L +F+ M  +   P++  +++IL ACAH+GA+DIG WIH Y+      +T   S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALRLFKEMEKAR 420
             T L+DMYAKCG ++    +F+ +  +    WN MI G AMHG  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDXXXXXXXXXXX 480
           I+PDDITF+ +L+ACS+SGM + G  I   M   +K+ PK EHYGC+ID           
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID---LLGHSGLF 525

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLSNMY 496
                                                                VLLSN+Y
Sbjct: 526 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 585

[Close]

BLAST of Carg17610 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 3.9e-58
Identity = 155/516 (30.04%), Postives = 234/516 (45.35%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGL---GSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICN 60
           M QLKQ HA  L +      +  F   ++L   +      +++A +++  I++ +  + N
Sbjct: 61  MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSS--FSDVNYAFRVFDSIENHSSFMWN 120

Query: 61  TMIKAF---LLRGEFLNAIVIYSAM-RRNEIAPDSYTHPYILKACARIKKFHLGESVHAC 120
           T+I+A    + R E   A ++Y  M  R E +PD +T P++LKACA I  F  G+ VH  
Sbjct: 121 TLIRACAHDVSRKE--EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 180

Query: 121 AVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXX 180
            VK GF  DV+V N L+ +Y + G +  A +VFDEMPE S VSW  MI            
Sbjct: 181 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE---- 240

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHM 240
                                      +   L +FR MQ    EPD   + ++L ACA +
Sbjct: 241 ---------------------------YDSALQLFREMQ-RSFEPDGYTMQSVLSACAGL 300

Query: 241 GALDIGIWIHRYL---SHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWN 300
           G+L +G W H +L     +++ + + V   L++MY KCG L M   +F  M +RD   WN
Sbjct: 301 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 360

Query: 301 VMISGMAMHGDGEGALRLFKEM--EKARIKPDDITFIAILAACSNSGMANEGLKILNKMC 360
            MI G A HG  E A+  F  M  ++  ++P+ +TF+ +L AC++ G  N+G +  + M 
Sbjct: 361 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 420

Query: 361 TIHKIEPKAEHYGCIID-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
             + IEP  EHYGCI+D                                           
Sbjct: 421 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 480

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGC 480
                                     VLLS +YA+     D   VRK+M   G+ K PGC
Sbjct: 481 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 540

Query: 481 SSIKLNGVVTEFIAGDKTHLQIGDIHLVLEELNKQI 500
           SSI++NG+  EF AGD +H Q   I+  L+ ++ ++
Sbjct: 541 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRL 540

[Close]

BLAST of Carg17610 vs. Swiss-Prot
Match: sp|Q9FMA1|PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.7e-58
Identity = 152/504 (30.16%), Postives = 244/504 (48.41%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           +K LKQ+H  ++ +GL  ++  +++ ++ C+   H  L +A  ++ H   P   + NTMI
Sbjct: 28  LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87

Query: 61  KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKL 120
           +A  L  E      AI +Y  +      PD++T P++LK   R+     G  +H   V  
Sbjct: 88  RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147

Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMI--XXXXXXXXXXXXXX 180
           GF   V V   L+ MY + G + DA ++FDEM       W  ++                
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207

Query: 181 XXXXXXXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
                      XXXXXXXXXXX          F+ M +  VEPDE  ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVXXXXXXXXXXXXXXXXXXXXXFQRMLMENVEPDEVTLLAVLSACADLGS 267

Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
           L++G  I  Y+ H  +   + ++  ++DMYAK G++     +F+ + +R+ + W  +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327

Query: 301 MAMHGDGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
           +A HG G  AL +F  M KA ++P+D+TFIAIL+ACS+ G  + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387

Query: 361 KAEHYGCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
             EHYGC+ID                                                  
Sbjct: 388 NIEHYGCMID---LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 447

Query: 421 XXXXXXXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEF 480
                         +LL+N+Y+ LG   +++ +R MMK  GV+K+ G SSI++   V +F
Sbjct: 448 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 507

Query: 481 IAGDKTHLQIGDIHLVLEELNKQI 500
           I+GD TH Q+  IH +L+E++ QI
Sbjct: 508 ISGDLTHPQVERIHEILQEMDLQI 526

[Close]

BLAST of Carg17610 vs. TrEMBL
Match: tr|A0A1S4E5C9|A0A1S4E5C9_CUCME (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=3656 GN=LOC103503327 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.5e-174
Identity = 351/504 (69.64%), Postives = 388/504 (76.98%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M  LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAIV++SAM RN I PD+YT PY+LKA AR+   HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELSAVSWTVMI   XXXXXXXXXXXXXXXX
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA++LF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GC+ID                                                       
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSNMYAALG H DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDL 505
           TH  IG+IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521

[Close]

BLAST of Carg17610 vs. TrEMBL
Match: tr|A0A0A0KNK8|A0A0A0KNK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 6.1e-173
Identity = 350/504 (69.44%), Postives = 389/504 (77.18%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M QLKQAHAQVL SGL +++F LSRLL+FCAE R+GSLSHA KL++HIQHPTICI NTMI
Sbjct: 18  MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAI ++SA+ RN I PD+YT PY+LKA AR+   HLGES+HAC +KLG  
Sbjct: 78  KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
           ++ FVGNSLLVMY +F NMR A QVFDEMPELSAVSWTVMI  XXXXXXXXXXXXXXXXX
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGXXXXXXXXXXXXXXXXX 197

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA++LF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M T+HKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GC+ID                                                       
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSNMYAALG H DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THLQIGDIHLVLEELNKQISQPDL 505
           TH  I +IHLVLEELNKQI + DL
Sbjct: 498 THRHIDNIHLVLEELNKQIVEADL 521

[Close]

BLAST of Carg17610 vs. TrEMBL
Match: tr|M5XCC5|M5XCC5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G282900 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 295/499 (59.12%), Postives = 363/499 (72.75%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MK L+QAHAQV T GLG++SFALSR+L FC++P HGSLSHA KL++HI  PTICI NTM+
Sbjct: 22  MKHLQQAHAQVFTCGLGNSSFALSRVLAFCSDPNHGSLSHAWKLFQHIPQPTICIYNTML 81

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KA LLR + +  I +++ M +N + PD+YT PY+LKACAR++   LGE VH C++KLGFV
Sbjct: 82  KALLLRNDLILTINVFTKMLQNGMYPDNYTLPYVLKACARLQSSCLGELVHGCSLKLGFV 141

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
            D+FVGNSL+VMYCAF +M+ A  +FDE+P LSAVSWTVMI     XXXXXXXXXXXXXX
Sbjct: 142 SDIFVGNSLIVMYCAFDDMKAARHIFDEIPSLSAVSWTVMISGHSKXXXXXXXXXXXXXX 201

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXX NNCFKEGL+MFRLMQLTE+EPDEAI V++LCACAH+GALD GI
Sbjct: 202 XXXXXXXXXXXXXXXXQNNCFKEGLYMFRLMQLTEIEPDEAIFVSVLCACAHLGALDTGI 261

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIH YL+ L LPL++R+STGL+DMYAKCG LD+ R LF +MP+RDT+CWN MISGMA HG
Sbjct: 262 WIHSYLNRLRLPLSVRLSTGLIDMYAKCGKLDLARGLFYQMPKRDTVCWNAMISGMATHG 321

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGAL LF+EME A ++PDDITFIA+  ACS SGMA+EG+K+ +KMC I+ IEPK+EHY
Sbjct: 322 DGEGALELFREMEAAWVRPDDITFIAVFTACSYSGMAHEGMKVFDKMCRIYNIEPKSEHY 381

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GCI+D                                                       
Sbjct: 382 GCIVDLLSRAGLFEEAKEIIQRMPSSSKPSEEAVAWRAFLSACCNQGQAQLAEFAAEKLF 441

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSN+Y A G HG A+R+R +M+ +GVEK PGCSS+++N  V EFIAG+K
Sbjct: 442 QLERHSGVYVLLSNLYVAGGKHGAARRMRHLMRNRGVEKAPGCSSVEVNRAVHEFIAGEK 501

Query: 481 THLQIGDIHLVLEELNKQI 500
           TH Q+ +I LVL  ++KQ+
Sbjct: 502 THRQMEEIQLVLGTISKQL 520

[Close]

BLAST of Carg17610 vs. TrEMBL
Match: tr|A0A2P5AUL7|A0A2P5AUL7_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_341000 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144
Identity = 288/497 (57.95%), Postives = 357/497 (71.83%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M+ LKQAHA ++TSGLGSNSFALSR+LDFC+ P  GS +HA K+++HIQ PTICI NT++
Sbjct: 21  MQDLKQAHALIVTSGLGSNSFALSRVLDFCSNPNQGSPAHAWKVFQHIQKPTICIWNTIL 80

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KAFLL  E    + +Y  + +  IAPD+YT PY+ KAC+R+K   LGESVH   +KLG V
Sbjct: 81  KAFLLNNELFETVSVYKNLLQCGIAPDNYTLPYVFKACSRLKSVPLGESVHGYGLKLGLV 140

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
            D+FVGNSL+ MYC F NM+ A  +FDEMP LSAVSWTVMI XXXXXXXXXXXXXXXXXX
Sbjct: 141 FDIFVGNSLIFMYCEFRNMKGARYMFDEMPSLSAVSWTVMISXXXXXXXXXXXXXXXXXX 200

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXXXN CFKEGL++FRLMQ T++EPDEAI V+ILC CAH+GALD+GI
Sbjct: 201 XXXXXXXXXXXXXXXXXNACFKEGLYLFRLMQFTDIEPDEAIFVSILCGCAHLGALDVGI 260

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL H+  PL++R+STGL+DMYAKCG+LD+ + +F EMP +DT+CWN MIS MA+HG
Sbjct: 261 WIHRYLDHIGFPLSIRLSTGLIDMYAKCGNLDLAKRIFYEMPLKDTVCWNAMISAMAIHG 320

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGE  L LF+EMEK  ++PDDITFIA+  ACS SGM  EGL++ ++MCT++KI+PK+EHY
Sbjct: 321 DGETVLELFREMEKIGVRPDDITFIAVFTACSYSGMTYEGLRMFDRMCTVYKIQPKSEHY 380

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GCI+D                                                       
Sbjct: 381 GCIVDLLSRGGLFEEAKEIVQRVIISSNPSEEELVWRAFLSACCTHGQAQLAELASGKLF 440

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSN+YAA G  GDA +VRK+MK +GVEKVPGCSS++++G V EFIAG+K
Sbjct: 441 QLERESGFYVLLSNLYAAAGKDGDALKVRKLMKNRGVEKVPGCSSVEIDGGVHEFIAGEK 500

Query: 481 THLQIGDIHLVLEELNK 498
            H  + +IH VL+ LN+
Sbjct: 501 IHPHMEEIHSVLDMLNR 517

[Close]

BLAST of Carg17610 vs. TrEMBL
Match: tr|A0A2P5E273|A0A2P5E273_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_008740 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144
Identity = 286/497 (57.55%), Postives = 355/497 (71.43%), Query Frame = 0


Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M+ LKQAHA ++TSGLGSNSFALSR+LDFC+ P  GS +HA K+++HIQ+PTICI NT++
Sbjct: 21  MQDLKQAHALIVTSGLGSNSFALSRVLDFCSNPNQGSPAHAWKVFQHIQNPTICIWNTIL 80

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYILKACARIKKFHLGESVHACAVKLGFV 120
           KAFLL  +    + +Y  + +  IAPD+YT PY+ KAC+R+K   LGESVH   +KLG V
Sbjct: 81  KAFLLNNKLFETVSVYKNLLQCGIAPDNYTLPYVFKACSRLKSVPLGESVHGYGLKLGLV 140

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIXXXXXXXXXXXXXXXXXXX 180
            D+FVGNS++VMYC F NM+ A   FDEMP LSAVSWTVMI  XXXXXXXXXXXXXXXXX
Sbjct: 141 FDIFVGNSVIVMYCEFRNMKGARYTFDEMPRLSAVSWTVMISGXXXXXXXXXXXXXXXXX 200

Query: 181 XXXXXXXXXXXXXXXXXNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           XXXXXXXXXXXXXXXX N CFKEGLH+FRLMQ +++EPDE I V+ILC CAH+GALD+GI
Sbjct: 201 XXXXXXXXXXXXXXXXQNACFKEGLHLFRLMQFSDIEPDETIFVSILCGCAHLGALDVGI 260

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL H+  PL++R+STGL+DMYAKCG+LD+ + +F EMP +DT+CWN MIS MA+HG
Sbjct: 261 WIHRYLDHIGFPLSIRLSTGLIDMYAKCGNLDLAKRIFFEMPLKDTVCWNAMISAMAIHG 320

Query: 301 DGEGALRLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGE AL LF+EMEK  ++PDDITFIAI  ACS SGM  EGL++ ++MCT++KI+PK+EHY
Sbjct: 321 DGETALELFQEMEKIGVRPDDITFIAIFTACSYSGMTYEGLRMFDRMCTVYKIQPKSEHY 380

Query: 361 GCIIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           GCI+D                                                       
Sbjct: 381 GCIVDLLSRAGLFEEAKEIVQRVTISSNPSEEELVWRAFLSACCTHGQAQLSELASGKLF 440

Query: 421 XXXXXXXXXVLLSNMYAALGNHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
                    VLLSN+YAA G  GDA +VRK+MK +GVEKVPGCS ++++G V EFIAG+K
Sbjct: 441 QLERESGFYVLLSNLYAAAGKDGDALKVRKLMKNRGVEKVPGCSCVEIDGGVHEFIAGEK 500

Query: 481 THLQIGDIHLVLEELNK 498
            H  + +IH VL+ LNK
Sbjct: 501 IHPHMEEIHSVLDTLNK 517

The following BLAST results are available for this feature:

BLAST of Carg17610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951910.1	2.6e-207	94.48	pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita moschata]	[more]
XP_022973287.1	2.0e-196	90.73	pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita maxima]	[more]
XP_016903441.1	3.8e-174	69.64	PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis m...	[more]
XP_004143828.1	9.2e-173	69.44	PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X1...	[more]
XP_023537919.1	9.0e-152	72.58	pentatricopeptide repeat-containing protein ELI1, chloroplastic-like [Cucurbita ...	[more]

BLAST of Carg17610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31920.1	7.8e-65	29.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	1.3e-64	36.33	mitochondrial editing factor 21	[more]
AT1G08070.1	3.9e-64	27.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G59720.1	2.2e-59	30.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G56310.1	3.7e-59	30.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg17610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C6T2\|PPR68_ARATH	1.4e-63	29.47	Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SIL5\|PP165_ARATH	2.4e-63	36.33	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LN01\|PPR21_ARATH	7.0e-63	27.71	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
sp\|Q0WQW5\|PPR85_ARATH	3.9e-58	30.04	Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
sp\|Q9FMA1\|PP433_ARATH	6.7e-58	30.16	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg17610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E5C9\|A0A1S4E5C9_CUCME	2.5e-174	69.64	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0KNK8\|A0A0A0KNK8_CUCSA	6.1e-173	69.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1	[more]
tr\|M5XCC5\|M5XCC5_PRUPE	2.1e-149	59.12	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G282900 PE=4 SV=1	[more]
tr\|A0A2P5AUL7\|A0A2P5AUL7_9ROSA	7.8e-144	57.95	Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_341000 PE=4 ...	[more]
tr\|A0A2P5E273\|A0A2P5E273_PARAD	7.8e-144	57.55	Tetratricopeptide-like helical domain containing protein OS=Parasponia andersoni...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17610-RA	Carg17610-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 285..332 e-value: 6.4E-12 score: 45.4 coord: 51..100 e-value: 6.5E-9 score: 35.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 287..320 e-value: 8.1E-9 score: 33.1 coord: 55..88 e-value: 3.2E-4 score: 18.7 coord: 188..220 e-value: 2.3E-6 score: 25.4 coord: 155..179 e-value: 3.4E-4 score: 18.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 127..151 e-value: 0.011 score: 15.8 coord: 359..382 e-value: 0.031 score: 14.4 coord: 394..413 e-value: 0.28 score: 11.4 coord: 155..179 e-value: 1.5E-4 score: 21.7 coord: 187..212 e-value: 3.6E-4 score: 20.5 coord: 259..284 e-value: 0.039 score: 14.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 356..390 score: 7.465
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..422 score: 6.84
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 184..218 score: 9.525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 52..86 score: 8.385
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 219..253 score: 5.185
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 122..156 score: 8.627
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 254..284 score: 7.388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..459 score: 7.191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 19..51 score: 5.185
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 11.948
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..355 score: 7.158
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 87..121 score: 6.401
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..152 e-value: 4.5E-23 score: 84.1 coord: 257..469 e-value: 2.4E-39 score: 137.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 153..251 e-value: 4.0E-17 score: 64.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 157..188 coord: 370..448
None	No IPR available	PANTHER	PTHR24015:SF827	SUBFAMILY NOT NAMED	coord: 10..481
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 10..481

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17610	Cucurbita moschata (Rifu)	carcmoB0181
Carg17610	Cucurbita pepo (Zucchini)	carcpeB0193