Carg17609 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17609
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Leucine-rich repeat (LRR) family protein
Location	Cucurbita_argyrosperma_scaffold_119 : 87460 .. 92164 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCGAACTCCATTGCCAGACTTCCCAGTCTCTCAAATCCACAAGAACACTCACTACCCATTGCCAGGCCAGTGGGAGAATTGGAAACCCACACCACAAATTCGAACTTCGCAGCAACTAGAATGCGGCACAGATTTTCATTTACAGCATTCTCCATAATCTTCTTCGTTTTTGTTTTTGCTCACCAATCCGTTCTCTGCAAAACCTTGAAACGAGATGGTATCTTCTCCTGTTCTTCTTTGCGATCTTTCTCAAGGTTTATTTGGTTGAGTTTTACTCTAGGGTTTTATTGTTCTTTCTCTTACAGTGAAAGCATTGAATGAGATCAAGGCCTCTCTCGGTTGGAGAGTGGTGTATTCCTGGGTTGGAGATGATCCCTGTGGTGATGGCCACCTTCCACCTTGGTCCGGCGTTACCTGTTCCACTCAAGGGGATTACAGAGTCGTCACTGAATTGTATGCCTATCTTCAAGCGAAACTTCGATTTCTTTTCTCGTTCCCTGTAATTGTTGCTTTATCATAAATTTACAGCTACTTCATGAGACGGTTTGCTTTGGGAAGTGCGATTTTCATATTTATTTCTGATCATTTCTTTGCAGAGAAGTCTATGCGGTTTCAATCGTTGGACCTTTTCCTGTCGCGGTTACCAATCTCTTGGATCTTACTAGGCTGTGAGATTTCTTCTTTCGCTGATTTTTGTCGTAATTTATTCTTTTTTTTTTTACTCTAACCATGGGGATTATGAACTGGGAGATTGAAACGTGGATATGCTTTCTTGACAATTCATCAATTGTTTTTATCCTCGTGCTATACTCTTACTCTTGTACATTGTTTCCGTCTTCTGATAACGAGGATCCAATTTCTAACAATTTCATATTCGACATTTAGACTTCTGTGTTACGAATTTTGTTTATGGTTGTATTTTTGAAAATTAAACTTTAAAAACTACATATACCATTTTTTTTCATCAAGATTTTTACTCTTAGAACACTTCTCATTTTAGCCGAATTTGTAGGATAAAAACAAGTTTTTGAAAACTATGGTCTGTTTGCTAACAGTCTGGTTTTTGGTTTTGAAATTTGGGTTTGTTTTCTTATTATTTCTGGCTTCATCTTTCTTAAGAGAACATTTGAATTCTAAGTCAAATTATCTTAGTTTCAAACAAACCCCCATAAGTGGACGATGTGCCGGCCTTCTCGCTGTTCCCCGAAGGGGGGTGGATTGTGATATCCCACATTGGTTGGGAAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCTCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAACCTAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCATGCCCTAAAACTTAGTCGTGCCAATAGATTGATAAATCCTCAAATATCGAACAAAGAACTCTTAAAGAAAAAGGAGCCAAGCCCCCCTCCTCGAAGGCAGTCAAAAATGACTAAGACTACAAAGAACTCTTAAAGAAAAAGGAGCCAAGCCCCTCCTCGAAGGCAGAAAAAGGAGCCAAGCCCCTCTACAAAGAACTCTTAAAGAAAAAGGAGAAAAAGGAGCCAAGCCCCTCCTCGAAGGCAGTAAAAAATGACTAAGACTCCAAAGGGAGTAAGGGGAGGCGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAGGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGTATTGACAAACTTGATTTTCAAAAACCAAATGAAAAATCAAACATGTCCTACATTTTTTTTATATAGATTTTGGCTATGATTCTAAAGAATTTTGAAAGTAGATCAAAACACAGAAACGGTAGTAAATAAGCATAATTTTTTAAAACAGAAAGGTTATTAAAATGGGCCGTTATGATTTACTAAGTAGTTTTGGTAGTAGCCAACTCTTGCATTTTCACATCCCGGTGATTCACTAATCCATATATAATTATTGCTGGATACAGACATTCTCTTGCTTCGAATGGCATCTAGTGTTATTTTCTTTATTGTAGATTCGTTAACCCTTTTTATAATTTAGATGGAAAATTGCACAATGTGAATTATGAAGTTTGTTACAATAATACCCTTGAACTTTTAATTTGATTAATCAACCTCATGTACGTTTTTAAGCGTTGCAATTACACCCATGTATTTTTAACTTGATCTGTTAGCCCCTTTACTTTATTAAGTACTGCAATAAGACTCCTTTGCAACACTTAACAAAGTGGAAGAGGCTGATTGATCAAATTAATAATCATGGGTATGATTACAACATTTAAAAACCAATACTTAACAAAGTACAGGGACTGGTTGATCAAATTAAAAGTTTTAGAGTGTGATTGCAACAAACCTTATAGTTCAAGTGTGGTTTGTGCAATTTTTCCTAATTTAAATAAAAGGGGTTAAGAGGAGTATGTATTTGCACCTCTTCAAGATAGTTATGATTTGTATGCCTGCGTTTGTTCTTATAACAGGGATCTTCATAATAACAAGTTGACTGGACCAATTCCTCCTCAAATTGGACGGTTAAGACGCCTCAAAATACTGTATGTCCATGTGCATTTTTTAAAAATCATTTATCTGATTCAACTATGTATGTGATATGTACATGTGGTGGTTCATGATTCAGTTGCTGAAATCTCACGTTTTGTGTTTTTTTTCTAATCTGCCTAGTTGATTTATAGTTTTATGTCTTCCCTTTCTCAGTAATTTAAGGTGGAATAAACTTCAAGATGTCATCCCTCCCGAGATTGGTGCGCTAAAGAGTCTAACTCATTTGTGAGTAATTTTAGTTTCTACTACACATAATGTTATCTATATCTTTATCTTTTCATTTTCATCTATTCACATCTGTTGCCATTTTGAGATTATGCAGATATTTGGGTTTTAATAATTTCAAAGGCGAAATCCCCAAGGAGCTTGCTAATCTTCGGGAGCTTCGCTATCTCCATTTAAATGAAAATCGCCTTTCAGGAAGAATTCCTGCTGAACTGAGCACCCTCCCCAATCTTCGTCACCTGTAAACTTCTGTTATTTGGATCATTTTGTTTTGGAAAACAATAGAATATAGATGTTTATATTTGACTTGACATTTTGATTTTGTAAGGGATGTTGGTAACAATCATTTAGTAGGAACCATCAGGGAACTTATTCGCATCGAAGGTTGTTTTCCATCGCTCCGAAACCTGTAAGCCGTGTGAAGACAGAAACCGTCTTAGTTAATTTTGTTTGAAATACTTCTTGTCATTAGTTTATTTTTATTTTTGTATGTAGGTACATAAACAATAATTATTTTACGGGAGGAGTTCCATCACAGCTTGCAAACCTGACTAATTTGGAAATCCTGTAATCTACTGACTTTTAGCTCTCTATCTCCTTCCTATCATCAGTTTTTTCTGACCATTTGTTTTGTCGGGTGTAGGTACCTCTCCTACAATAAGATGTCTGGAATCATACCACCTGGGGTAGCTCAGATTTCCAAGTTGACTTATCTGTAAGTCTGTTCTTGATCCTTCTTCAATTTTCATATTTAATATTTGGTTGAATCTGAATATATGTTACGCTTGTAACTGTTAAGAAATTAGTAATTGCAAAATTTTCCCTTCCTAACGGGCAATAATTATATAAAAAACTCTCTTAATAAATTTGTTATAATTTTCGTGAAAATTACTATTTTTAAAATCACGTATGGGCTTGTTTGGGAATAATTAAGACTGTGATTATAGCACGATTAATTTGTTTATCATTAATTTATTATAAGTAATTTTCATATAATCATTTTGATGTTTGGGTTTGACATTTTTAATATCTTAGGACATGTTTAAGCTAAGTGATTGAATTATAATTAGTCTTATGCAAGTGTTTAGTTACAATTAATTATGAGAATCCACAGACTAGTTGTTTTGTTAGGACAGGGGAGTGGTTTTGGAATAGACAAATTCATTTCTTTTTTCCTTCATATGATGATTTGTATCCTTCAGTGTCCTTTTATGAACTGCGAAGGTTTTAATTCTAGGTACTTGGATCACAACCAATTTAGTGGAAGAATCCCTGATGCCTTCTATAAACACCCGTTCTTAAAAGAGATGTGAGTGTCTTCTGTATCCTCAATTCTGAACTTAAATTTCATATCAATTGCTAGTTAGGCTGTTAGTTATTTTTCTAAGGCCATGTTCTTCATAGGTACATTGAAGGAAATGCGTTTCGGCAAGGCGTGAAGCCGATCGGTATCCATAAGGTTCTTGAAGTCTCTGATGCAGAATTCCTTGCTTGATCGGTAAGTCGAATCGAGACTATATAGCTATCTTGTTTAAATTTAGTGTGTTGGCAAAATTTGGCTCTGGATGTTGGCCATTATAATATATCTATCTATATGGAAGTAGGTAAAGGCTGTGCAATGTATATATAGGAGAATGATACATTTGTTGGAACTAAACCATATTTGTCCTAATAGAATGTAAAGTGAATTTATCCACTTGTTCTAATTGAGCATTATTCAAAGCTGAGGAATCAGGATTTGCTGAAAATG

mRNA sequence

CACTCGAACTCCATTGCCAGACTTCCCAGTCTCTCAAATCCACAAGAACACTCACTACCCATTGCCAGGCCAGTGGGAGAATTGGAAACCCACACCACAAATTCGAACTTCGCAGCAACTAGAATGCGGCACAGATTTTCATTTACAGCATTCTCCATAATCTTCTTCGTTTTTGTTTTTGCTCACCAATCCGTTCTCTGCAAAACCTTGAAACGAGATGTGAAAGCATTGAATGAGATCAAGGCCTCTCTCGGTTGGAGAGTGGTGTATTCCTGGGTTGGAGATGATCCCTGTGGTGATGGCCACCTTCCACCTTGGTCCGGCGTTACCTGTTCCACTCAAGGGGATTACAGAGTCGTCACTGAATTAGAAGTCTATGCGGTTTCAATCGTTGGACCTTTTCCTGTCGCGGTTACCAATCTCTTGGATCTTACTAGGCTGGATCTTCATAATAACAAGTTGACTGGACCAATTCCTCCTCAAATTGGACGGTTAAGACGCCTCAAAATACTTAATTTAAGGTGGAATAAACTTCAAGATGTCATCCCTCCCGAGATTGGTGCGCTAAAGAGTCTAACTCATTTATATTTGGGTTTTAATAATTTCAAAGGCGAAATCCCCAAGGAGCTTGCTAATCTTCGGGAGCTTCGCTATCTCCATTTAAATGAAAATCGCCTTTCAGGAAGAATTCCTGCTGAACTGAGCACCCTCCCCAATCTTCGTCACCTGGATGTTGGTAACAATCATTTAGTAGGAACCATCAGGGAACTTATTCGCATCGAAGGTTGTTTTCCATCGCTCCGAAACCTGTACATAAACAATAATTATTTTACGGGAGGAGTTCCATCACAGCTTGCAAACCTGACTAATTTGGAAATCCTGTACCTCTCCTACAATAAGATGTCTGGAATCATACCACCTGGGGTAGCTCAGATTTCCAAGTTGACTTATCTGTACTTGGATCACAACCAATTTAGTGGAAGAATCCCTGATGCCTTCTATAAACACCCGTTCTTAAAAGAGATGTACATTGAAGGAAATGCGTTTCGGCAAGGCGTGAAGCCGATCGGTATCCATAAGGTTCTTGAAGTCTCTGATGCAGAATTCCTTGCTTGATCGGTAAGTCGAATCGAGACTATATAGCTATCTTGTTTAAATTTAGTGTGTTGGCAAAATTTGGCTCTGGATGTTGGCCATTATAATATATCTATCTATATGGAAGTAGGTAAAGGCTGTGCAATGTATATATAGGAGAATGATACATTTGTTGGAACTAAACCATATTTGTCCTAATAGAATGTAAAGTGAATTTATCCACTTGTTCTAATTGAGCATTATTCAAAGCTGAGGAATCAGGATTTGCTGAAAATG

Coding sequence (CDS)

CACTCGAACTCCATTGCCAGACTTCCCAGTCTCTCAAATCCACAAGAACACTCACTACCCATTGCCAGGCCAGTGGGAGAATTGGAAACCCACACCACAAATTCGAACTTCGCAGCAACTAGAATGCGGCACAGATTTTCATTTACAGCATTCTCCATAATCTTCTTCGTTTTTGTTTTTGCTCACCAATCCGTTCTCTGCAAAACCTTGAAACGAGATGTGAAAGCATTGAATGAGATCAAGGCCTCTCTCGGTTGGAGAGTGGTGTATTCCTGGGTTGGAGATGATCCCTGTGGTGATGGCCACCTTCCACCTTGGTCCGGCGTTACCTGTTCCACTCAAGGGGATTACAGAGTCGTCACTGAATTAGAAGTCTATGCGGTTTCAATCGTTGGACCTTTTCCTGTCGCGGTTACCAATCTCTTGGATCTTACTAGGCTGGATCTTCATAATAACAAGTTGACTGGACCAATTCCTCCTCAAATTGGACGGTTAAGACGCCTCAAAATACTTAATTTAAGGTGGAATAAACTTCAAGATGTCATCCCTCCCGAGATTGGTGCGCTAAAGAGTCTAACTCATTTATATTTGGGTTTTAATAATTTCAAAGGCGAAATCCCCAAGGAGCTTGCTAATCTTCGGGAGCTTCGCTATCTCCATTTAAATGAAAATCGCCTTTCAGGAAGAATTCCTGCTGAACTGAGCACCCTCCCCAATCTTCGTCACCTGGATGTTGGTAACAATCATTTAGTAGGAACCATCAGGGAACTTATTCGCATCGAAGGTTGTTTTCCATCGCTCCGAAACCTGTACATAAACAATAATTATTTTACGGGAGGAGTTCCATCACAGCTTGCAAACCTGACTAATTTGGAAATCCTGTACCTCTCCTACAATAAGATGTCTGGAATCATACCACCTGGGGTAGCTCAGATTTCCAAGTTGACTTATCTGTACTTGGATCACAACCAATTTAGTGGAAGAATCCCTGATGCCTTCTATAAACACCCGTTCTTAAAAGAGATGTACATTGAAGGAAATGCGTTTCGGCAAGGCGTGAAGCCGATCGGTATCCATAAGGTTCTTGAAGTCTCTGATGCAGAATTCCTTGCTTGA

Protein sequence

HSNSIARLPSLSNPQEHSLPIARPVGELETHTTNSNFAATRMRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGHLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDLTRLDLHNNKLTGPIPPQIGRLRRLKILNLRWNKLQDVIPPEIGALKSLTHLYLGFNNFKGEIPKELANLRELRYLHLNENRLSGRIPAELSTLPNLRHLDVGNNHLVGTIRELIRIEGCFPSLRNLYINNNYFTGGVPSQLANLTNLEILYLSYNKMSGIIPPGVAQISKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNAFRQGVKPIGIHKVLEVSDAEFLA

Homology

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BLAST of Carg17609 vs. NCBI nr
Match: XP_022973271.1 (probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita maxima])

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54
Identity = 314/330 (95.15%), Postives = 314/330 (95.15%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 161
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 120

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCF               GV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFPLLRNLYINNNYFTGGV 240

Query: 282 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           PSQLANLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PSQLANLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 342 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 372
           XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA
Sbjct: 301 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 330

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BLAST of Carg17609 vs. NCBI nr
Match: XP_023536713.1 (probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 3.7e-54
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           MRHRFSFT FSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MRHRFSFTVFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 161
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 120

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 240

Query: 282 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 342 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 372
           XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA
Sbjct: 301 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 330

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BLAST of Carg17609 vs. NCBI nr
Match: XP_022952031.1 (leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 [Cucurbita moschata])

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 161
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVG FPVAVTNLLDXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGSFPVAVTNLLDXXXXXXXXXXXXXXXXXX 120

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 240

Query: 282 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 342 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 372
           XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA
Sbjct: 301 XXXXXXXXXQGVKPIGIHKVLEVSDAEFLA 330

[Close]

BLAST of Carg17609 vs. NCBI nr
Match: XP_022150335.1 (probable leucine-rich repeat receptor-like protein kinase At1g35710 [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 93/102 (91.18%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M HRFSFTAFSII FVF FA +S LCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGD 
Sbjct: 15  MAHRFSFTAFSIILFVFTFAPESALCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDA 74

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
            LPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFP AVTNLLD
Sbjct: 75  VLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPAAVTNLLD 116

[Close]

BLAST of Carg17609 vs. NCBI nr
Match: XP_004143790.1 (PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucumis sativus] >KGN51189.1 hypothetical protein Csa_5G485190 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 5.9e-44
Identity = 312/329 (94.83%), Postives = 315/329 (95.74%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M H+F F  FS I F+F   HQSVLCKTLKRDVKAL EIKASLGWRVVYSWVGDDPCG  
Sbjct: 1   MGHQFPFIPFSFILFLFALPHQSVLCKTLKRDVKALTEIKASLGWRVVYSWVGDDPCGAS 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 161
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 120

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIR+EGC XXXXXXXXXXXXXXXGV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRLEGCXXXXXXXXXXXXXXXXGV 240

Query: 282 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 342 XXXXXXXXXQGVKPIGIHKVLEVSDAEFL 371
           XXXXXXXXXQGVKPIG HKVLEVSDAEFL
Sbjct: 301 XXXXXXXXXQGVKPIGFHKVLEVSDAEFL 329

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BLAST of Carg17609 vs. TAIR10
Match: AT5G61240.2 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 161.8 bits (408), Expect = 8.3e-40
Identity = 79/102 (77.45%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M  R       +   +  FAH     KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MASRCELLLICVFSLLIAFAHS----KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
            LPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFP+AVTNLLD
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLD 98

[Close]

BLAST of Carg17609 vs. TAIR10
Match: AT1G13910.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 68  KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGHLPPWSGVTCSTQGDYRVVTELEVYA 127
           KTLKRD+KALNEIK  +GWR+VYSWVGDDPCGDG LPPWSGVTCS  GDYRVV +LEVY+
Sbjct: 27  KTLKRDMKALNEIKKLVGWRLVYSWVGDDPCGDGVLPPWSGVTCSKVGDYRVVVKLEVYS 86

Query: 128 VSIVGPFPVAVTNLLD 144
           +SIVG FP A+T LLD
Sbjct: 87  MSIVGNFPKAITKLLD 102

[Close]

BLAST of Carg17609 vs. TrEMBL
Match: tr|A0A0A0KQM3|A0A0A0KQM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485190 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.9e-44
Identity = 312/329 (94.83%), Postives = 315/329 (95.74%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M H+F F  FS I F+F   HQSVLCKTLKRDVKAL EIKASLGWRVVYSWVGDDPCG  
Sbjct: 1   MGHQFPFIPFSFILFLFALPHQSVLCKTLKRDVKALTEIKASLGWRVVYSWVGDDPCGAS 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 161
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLDXXXXXXXXXXXXXXXXXX 120

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRIEGCFXXXXXXXXXXXXXXXGV 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIR+EGC XXXXXXXXXXXXXXXGV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELIRLEGCXXXXXXXXXXXXXXXXGV 240

Query: 282 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PSQLANLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 342 XXXXXXXXXQGVKPIGIHKVLEVSDAEFL 371
           XXXXXXXXXQGVKPIG HKVLEVSDAEFL
Sbjct: 301 XXXXXXXXXQGVKPIGFHKVLEVSDAEFL 329

[Close]

BLAST of Carg17609 vs. TrEMBL
Match: tr|A0A1S3CPF5|A0A1S3CPF5_CUCME (probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis melo OX=3656 GN=LOC103503326 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 5.7e-43
Identity = 87/102 (85.29%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M H+F F  FS+IFF+F   HQ V CKTLKRDVKAL EIKASLGWRVVYSWVGDDPCG  
Sbjct: 1   MGHQFPFIPFSLIFFLFALPHQFVHCKTLKRDVKALTEIKASLGWRVVYSWVGDDPCGGS 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
           HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD
Sbjct: 61  HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 102

[Close]

BLAST of Carg17609 vs. TrEMBL
Match: tr|A0A2R6PBL4|A0A2R6PBL4_ACTCH (Leucine-rich repeat receptor-like protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31479 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 84/102 (82.35%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M +R+  TAF++I F++V     V CKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MANRYPSTAFAVILFLYVIV--VVHCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
            LPPWSGVTC TQGDYRVVTELEVYAVSIVGPFPVAVTNLLD
Sbjct: 61  DLPPWSGVTCLTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 100

[Close]

BLAST of Carg17609 vs. TrEMBL
Match: tr|A0A1S3BF09|A0A1S3BF09_CUCME (probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis melo OX=3656 GN=LOC103489171 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 81/102 (79.41%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 42  MRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 101
           M  R S  AF + F  F   +  +LCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCLFFLSFSLLNDLILCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 102 HLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
            LPPWSGVTC+TQGDYRVVT+LEVYAVSIVGPFP AVTNLLD
Sbjct: 61  DLPPWSGVTCTTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLD 102

[Close]

BLAST of Carg17609 vs. TrEMBL
Match: tr|A0A2R6RFK8|A0A2R6RFK8_ACTCH (Leucine-rich repeat receptor-like protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc06377 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 5.0e-39
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 41  RMRHRFSFTAFSIIFFVFVFAHQSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGD 100
           +M + ++ TAF++I F+ +  +  V CKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGD
Sbjct: 22  QMANHYASTAFAVILFLSL--NVVVHCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGD 81

Query: 101 GHLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 144
           G LPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD
Sbjct: 82  GDLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPVAVTNLLD 122

The following BLAST results are available for this feature:

BLAST of Carg17609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973271.1	1.3e-54	95.15	probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita m...	[more]
XP_023536713.1	3.7e-54	99.70	probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita p...	[more]
XP_022952031.1	1.1e-53	99.70	leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 [Cuc...	[more]
XP_022150335.1	1.1e-45	91.18	probable leucine-rich repeat receptor-like protein kinase At1g35710 [Momordica c...	[more]
XP_004143790.1	5.9e-44	94.83	PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [...	[more]

BLAST of Carg17609 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61240.2	8.3e-40	77.45	Leucine-rich repeat (LRR) family protein	[more]
AT1G13910.1	1.8e-31	78.95	Leucine-rich repeat (LRR) family protein	[more]

BLAST of Carg17609 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg17609 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQM3\|A0A0A0KQM3_CUCSA	3.9e-44	94.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485190 PE=4 SV=1	[more]
tr\|A0A1S3CPF5\|A0A1S3CPF5_CUCME	5.7e-43	85.29	probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis m...	[more]
tr\|A0A2R6PBL4\|A0A2R6PBL4_ACTCH	1.7e-39	82.35	Leucine-rich repeat receptor-like protein kinase OS=Actinidia chinensis var. chi...	[more]
tr\|A0A1S3BF09\|A0A1S3BF09_CUCME	2.9e-39	79.41	probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis m...	[more]
tr\|A0A2R6RFK8\|A0A2R6RFK8_ACTCH	5.0e-39	80.58	Leucine-rich repeat receptor-like protein kinase OS=Actinidia chinensis var. chi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf
IPR013210	LRR_N_plant-typ
IPR025875	Leu-rich_rpt_4
IPR003591	Leu-rich_rpt_typical-subtyp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17609-RA	Carg17609-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 141..165 e-value: 20.0 score: 10.7 coord: 312..336 e-value: 150.0 score: 3.5 coord: 189..212 e-value: 84.0 score: 5.7 coord: 288..311 e-value: 67.0 score: 6.5 coord: 213..237 e-value: 19.0 score: 11.0
IPR025875	Leucine rich repeat 4	PFAM	PF12799	LRR_4	coord: 215..257 e-value: 2.2E-7 score: 30.9
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 71..112 e-value: 1.9E-4 score: 21.5
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 72..229 e-value: 2.5E-41 score: 143.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 230..366 e-value: 2.8E-33 score: 116.9
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 265..325 e-value: 2.5E-12 score: 46.2 coord: 144..202 e-value: 1.5E-8 score: 34.1
None	No IPR available	PANTHER	PTHR45269	FAMILY NOT NAMED	coord: 46..370
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 73..350

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17609	Cucurbita pepo (Zucchini)	carcpeB0193
Carg17609	Cucurbita moschata (Rifu)	carcmoB0181