Carg17566 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAAGATTCAAATATGGAGGCAGAGTCAACTCTGCCTGAATGCGAAGAGAAGGACGTAGGTAGTTCTGATGTACAGACGGACCACGGAAATGTAGAAAATTTCTCAACAGAACATGAAGGTAAGAGAAAAGACGCTCCTACAGAACAAGTAGATGACATGAAAGAAGATGCGACTGAAGTCGGTAACACGTCTGAAACTGGAAAGTCTAATGAAAAATGCATTGCAAAAGGGTCGCGTAAAACGAAAACTGTAAAAGTTTTGAAGGTAAAGCGAAAAATTGTAAAGAAATCCCCTGCTAGCAATGCATTGAGGACCAGAAAGGCACAGGTTGAACAGGAAGATAACAAAAAGGAAAAAGAGGTTCATGTAGCCCAAGAAGTGGGAGAAACTCCTGAAGCTCGGAATTCCAAAAAGGACGATGAGGTTTCTGTCGACCAAGAAGCGGGAGAAACTCTCGAAGCTCCGATTTCCAACAAGGACGAAGAGGTTTCTGTAGACCAAGCAGTGGGAGAAACTCTTGAAGCTCAGAATTCCAATAAGGACAAAGAGGTTTCTGTTGACCAAGAAGTGGGAGAAACTCTTGAAGCTCAGAATCCCACTGAAAATTCCAGCAAACCAGAGTCAAAGACGAAGAAGATTACTAAAGCTTTGAAGGTGAAAAGAAAAATCGTAAAGAAATCTCGAGCGAGCAGCCAAATGAAGACTAATAAAAATGGGAAAGGTAATGAAAAGAACGTAGAAGATACCGTGAAGCCTGACGAAAAGGAAAATGCTAATGAAAGTATCTCAAAAGCGGAGCATATCGAGAAGGGTGAAGAGACATCTGCTAGCGATAGAAACAATTCCGAGTTCAAAAGTAGCATCAAGGAACAGAACAATATTGAGAAGGTTGGCTCTTCAGATAAGAGATTAAAGAATCACAAAAGGAAAGAAAAGGATAGAGCTCAAACGAGTCGAATAGAAGATAAGAACAAAGAAAATCTCGGCGGATTGATTTTCATGTGCAGTGCGAAAACGAAGCCAGATTGTTTTCACTACAGCGTAATGGGCGTTTCTGCTGGCAGAAAGGATACCGTCTTAGCAATCAAACCCGGGCTAAACCTATTCCTTTATGATTTTGATCTCAGGCTTCTATATGGGATTTACAAGGCATCTTCTTCCGGTGGCATGAAACTCGAGCCGAAGGCTTTCAATGGAGCTTTCCCTGCTCAGGTTTCAGCTTCATTACTTATATAAACTATTCAGAAGATAGTCTTTTCATCTGATTATGATATTGTTTCAATTCCAAACTAAAATTTCAGGTACGATTCAATGTTTACAAGGATTGTTTTCCACTACCTGAGAGCATTTTCAAGAATGCCATCCAAGAGAATTATTTTGAGAAGCACAAGTTCAAAGTTGAACTCTCTGTTAAACAGGTGGATGTGTCAGGTTCTTACTGCTAGCTTGGCTTATTCATAGCACTGTTTTATTGTATTTTTCCCTTGATTACATTGTAGGATTTCGTATCTCAGGTTCGGAAGCTCTCAGCTCTTTTCCGTCCAGTAGGACTCCTCTCGAGTTCGGCTTCTATTGGGTTCCTTCCAAAGGTGCCAATTAGGGATAGGAAAGTTGGAAGGAAAGTCGAAGACACTCGGATTAGGAATTCTAAGTCCAAGGGTGATGCCAGGAATGATCAATCGTCATCTCATGGATGGGACCGACACCGAGAGGAGGCACCTAGACATAGAGAGGAAGTTCCTCGCGAATTGTACGTAAGCGAAAAGGACTATCGAACTTATGGTCTTCAGGTAGAAAGAAGAAATTTAGATCCTGTGCCTTTGCCACTGCCTTATTTAGAAACATACCACAGAGATCATGATAGGGACTATCAACTAAGATATCTAGAGCAGCCACAGAGAGAAGTGGTTCGATCGGATAACGTACACTTTAACGGAAAAGATTATCCAGTTTACAGTATTGATTCTAGATCTCAAATATCACGGGCAATATCTGGTAGCGGTTCGGAACGACCTGCCTATGATCCAATTTACACTCATCAATATGGCCTTTCATCGATCGTCCCGTATCTGCTTCCATCAAGGAGAGATGAAGCTGCTGCTCCAACGTATTCAAGAAGTTACGTCGCTGATACTGAGCCCATGCGTCATGCTGCTCATGCTCTACCGTATTACAATCAGGCGCATCACGTAAATGTGGAGAGCGATATAATGCCAGTTTCGTCGAGATACTCCTTTCCCGGTCCATCGTTCTCATATCGCTAACTGTGATTACCATTTTTAAGGTTCGGGTTGAGTTTCACTTGCAGACGTCGTCTCGAGTATCAAATTATTGAGTCTTAAGAGACTCTCTCTGTGCAGTTGGAGTTTTTATATTAGCTTCATGTAATGGTAAATTATTATTACTCATATAATTTACTGCATACACACACAAACACATTATGGTTGTGTGGGAATAGTGAGGAAGATAATTTTTTAAATTTTACTTTCTAGTCCTTTTGTTTTTAGAAATTATTTAAAATGACTTATTTTGAAGGATTGTTTCACAAATGTTAATTTTTATGACACTCCGAAATTAATATGATTTAACGGGAGAGGTAGTCAATAGAAATTTCTTCGGGTTGGCTAAATGAGGTTTAGGTCGAGTATTAAATTCTTGTCTCCGTCCCTTACATGTACATATTTATGTATGTATGTATATATA ATGAAGCAAGATTCAAATATGGAGGCAGAGTCAACTCTGCCTGAATGCGAAGAGAAGGACGTAGGTAGTTCTGATGTACAGACGGACCACGGAAATGTAGAAAATTTCTCAACAGAACATGAAGGTAAGAGAAAAGACGCTCCTACAGAACAAGTAGATGACATGAAAGAAGATGCGACTGAAGTCGGTAACACGTCTGAAACTGGAAAGTCTAATGAAAAATGCATTGCAAAAGGGTCGCGTAAAACGAAAACTGTAAAAGTTTTGAAGGTAAAGCGAAAAATTGTAAAGAAATCCCCTGCTAGCAATGCATTGAGGACCAGAAAGGCACAGGTTGAACAGGAAGATAACAAAAAGGAAAAAGAGGTTCATGTAGCCCAAGAAGTGGGAGAAACTCCTGAAGCTCGGAATTCCAAAAAGGACGATGAGGTTTCTGTCGACCAAGAAGCGGGAGAAACTCTCGAAGCTCCGATTTCCAACAAGGACGAAGAGGTTTCTGTAGACCAAGCAGTGGGAGAAACTCTTGAAGCTCAGAATTCCAATAAGGACAAAGAGGTTTCTGTTGACCAAGAAGTGGGAGAAACTCTTGAAGCTCAGAATCCCACTGAAAATTCCAGCAAACCAGAGTCAAAGACGAAGAAGATTACTAAAGCTTTGAAGGTGAAAAGAAAAATCGTAAAGAAATCTCGAGCGAGCAGCCAAATGAAGACTAATAAAAATGGGAAAGGTAATGAAAAGAACGTAGAAGATACCGTGAAGCCTGACGAAAAGGAAAATGCTAATGAAAGTATCTCAAAAGCGGAGCATATCGAGAAGGGTGAAGAGACATCTGCTAGCGATAGAAACAATTCCGAGTTCAAAAGTAGCATCAAGGAACAGAACAATATTGAGAAGGTTGGCTCTTCAGATAAGAGATTAAAGAATCACAAAAGGAAAGAAAAGGATAGAGCTCAAACGAGTCGAATAGAAGATAAGAACAAAGAAAATCTCGGCGGATTGATTTTCATGTGCAGTGCGAAAACGAAGCCAGATTGTTTTCACTACAGCGTAATGGGCGTTTCTGCTGGCAGAAAGGATACCGTCTTAGCAATCAAACCCGGGCTAAACCTATTCCTTTATGATTTTGATCTCAGGCTTCTATATGGGATTTACAAGGCATCTTCTTCCGGTGGCATGAAACTCGAGCCGAAGGCTTTCAATGGAGCTTTCCCTGCTCAGGTACGATTCAATGTTTACAAGGATTGTTTTCCACTACCTGAGAGCATTTTCAAGAATGCCATCCAAGAGAATTATTTTGAGAAGCACAAGTTCAAAGTTGAACTCTCTGTTAAACAGGTTCGGAAGCTCTCAGCTCTTTTCCGTCCAGTAGGACTCCTCTCGAGTTCGGCTTCTATTGGGTTCCTTCCAAAGGTGCCAATTAGGGATAGGAAAGTTGGAAGGAAAGTCGAAGACACTCGGATTAGGAATTCTAAGTCCAAGGGTGATGCCAGGAATGATCAATCGTCATCTCATGGATGGGACCGACACCGAGAGGAGGCACCTAGACATAGAGAGGAAGTTCCTCGCGAATTGTACGTAAGCGAAAAGGACTATCGAACTTATGGTCTTCAGGTAGAAAGAAGAAATTTAGATCCTGTGCCTTTGCCACTGCCTTATTTAGAAACATACCACAGAGATCATGATAGGGACTATCAACTAAGATATCTAGAGCAGCCACAGAGAGAAGTGGTTCGATCGGATAACGTACACTTTAACGGAAAAGATTATCCAGTTTACAGTATTGATTCTAGATCTCAAATATCACGGGCAATATCTGGTAGCGGTTCGGAACGACCTGCCTATGATCCAATTTACACTCATCAATATGGCCTTTCATCGATCGTCCCGTATCTGCTTCCATCAAGGAGAGATGAAGCTGCTGCTCCAACGTATTCAAGAAGTTACGTCGCTGATACTGAGCCCATGCGTCATGCTGCTCATGCTCTACCGTATTACAATCAGGCGCATCACGTAAATGTGGAGAGCGATATAATGCCAGTTTCGTCGAGATACTCCTTTCCCGGTCCATCGTTCTCATATCGCTAACTGTGATTACCATTTTTAAGGTTCGGGTTGAGTTTCACTTGCAGACGTCGTCTCGAGTATCAAATTATTGAGTCTTAAGAGACTCTCTCTGTGCAGTTGGAGTTTTTATATTAGCTTCATGTAATGGTAAATTATTATTACTCATATAATTTACTGCATACACACACAAACACATTATGGTTGTGTGGGAATAGTGAGGAAGATAATTTTTTAAATTTTACTTTCTAGTCCTTTTGTTTTTAGAAATTATTTAAAATGACTTATTTTGAAGGATTGTTTCACAAATGTTAATTTTTATGACACTCCGAAATTAATATGATTTAACGGGAGAGGTAGTCAATAGAAATTTCTTCGGGTTGGCTAAATGAGGTTTAGGTCGAGTATTAAATTCTTGTCTCCGTCCCTTACATGTACATATTTATGTATGTATGTATATATA ATGAAGCAAGATTCAAATATGGAGGCAGAGTCAACTCTGCCTGAATGCGAAGAGAAGGACGTAGGTAGTTCTGATGTACAGACGGACCACGGAAATGTAGAAAATTTCTCAACAGAACATGAAGGTAAGAGAAAAGACGCTCCTACAGAACAAGTAGATGACATGAAAGAAGATGCGACTGAAGTCGGTAACACGTCTGAAACTGGAAAGTCTAATGAAAAATGCATTGCAAAAGGGTCGCGTAAAACGAAAACTGTAAAAGTTTTGAAGGTAAAGCGAAAAATTGTAAAGAAATCCCCTGCTAGCAATGCATTGAGGACCAGAAAGGCACAGGTTGAACAGGAAGATAACAAAAAGGAAAAAGAGGTTCATGTAGCCCAAGAAGTGGGAGAAACTCCTGAAGCTCGGAATTCCAAAAAGGACGATGAGGTTTCTGTCGACCAAGAAGCGGGAGAAACTCTCGAAGCTCCGATTTCCAACAAGGACGAAGAGGTTTCTGTAGACCAAGCAGTGGGAGAAACTCTTGAAGCTCAGAATTCCAATAAGGACAAAGAGGTTTCTGTTGACCAAGAAGTGGGAGAAACTCTTGAAGCTCAGAATCCCACTGAAAATTCCAGCAAACCAGAGTCAAAGACGAAGAAGATTACTAAAGCTTTGAAGGTGAAAAGAAAAATCGTAAAGAAATCTCGAGCGAGCAGCCAAATGAAGACTAATAAAAATGGGAAAGGTAATGAAAAGAACGTAGAAGATACCGTGAAGCCTGACGAAAAGGAAAATGCTAATGAAAGTATCTCAAAAGCGGAGCATATCGAGAAGGGTGAAGAGACATCTGCTAGCGATAGAAACAATTCCGAGTTCAAAAGTAGCATCAAGGAACAGAACAATATTGAGAAGGTTGGCTCTTCAGATAAGAGATTAAAGAATCACAAAAGGAAAGAAAAGGATAGAGCTCAAACGAGTCGAATAGAAGATAAGAACAAAGAAAATCTCGGCGGATTGATTTTCATGTGCAGTGCGAAAACGAAGCCAGATTGTTTTCACTACAGCGTAATGGGCGTTTCTGCTGGCAGAAAGGATACCGTCTTAGCAATCAAACCCGGGCTAAACCTATTCCTTTATGATTTTGATCTCAGGCTTCTATATGGGATTTACAAGGCATCTTCTTCCGGTGGCATGAAACTCGAGCCGAAGGCTTTCAATGGAGCTTTCCCTGCTCAGGTACGATTCAATGTTTACAAGGATTGTTTTCCACTACCTGAGAGCATTTTCAAGAATGCCATCCAAGAGAATTATTTTGAGAAGCACAAGTTCAAAGTTGAACTCTCTGTTAAACAGGTTCGGAAGCTCTCAGCTCTTTTCCGTCCAGTAGGACTCCTCTCGAGTTCGGCTTCTATTGGGTTCCTTCCAAAGGTGCCAATTAGGGATAGGAAAGTTGGAAGGAAAGTCGAAGACACTCGGATTAGGAATTCTAAGTCCAAGGGTGATGCCAGGAATGATCAATCGTCATCTCATGGATGGGACCGACACCGAGAGGAGGCACCTAGACATAGAGAGGAAGTTCCTCGCGAATTGTACGTAAGCGAAAAGGACTATCGAACTTATGGTCTTCAGGTAGAAAGAAGAAATTTAGATCCTGTGCCTTTGCCACTGCCTTATTTAGAAACATACCACAGAGATCATGATAGGGACTATCAACTAAGATATCTAGAGCAGCCACAGAGAGAAGTGGTTCGATCGGATAACGTACACTTTAACGGAAAAGATTATCCAGTTTACAGTATTGATTCTAGATCTCAAATATCACGGGCAATATCTGGTAGCGGTTCGGAACGACCTGCCTATGATCCAATTTACACTCATCAATATGGCCTTTCATCGATCGTCCCGTATCTGCTTCCATCAAGGAGAGATGAAGCTGCTGCTCCAACGTATTCAAGAAGTTACGTCGCTGATACTGAGCCCATGCGTCATGCTGCTCATGCTCTACCGTATTACAATCAGGCGCATCACGTAAATGTGGAGAGCGATATAATGCCAGTTTCGTCGAGATACTCCTTTCCCGGTCCATCGTTCTCATATCGCTAA MKQDSNMEAESTLPECEEKDVGSSDVQTDHGNVENFSTEHEGKRKDAPTEQVDDMKEDATEVGNTSETGKSNEKCIAKGSRKTKTVKVLKVKRKIVKKSPASNALRTRKAQVEQEDNKKEKEVHVAQEVGETPEARNSKKDDEVSVDQEAGETLEAPISNKDEEVSVDQAVGETLEAQNSNKDKEVSVDQEVGETLEAQNPTENSSKPESKTKKITKALKVKRKIVKKSRASSQMKTNKNGKGNEKNVEDTVKPDEKENANESISKAEHIEKGEETSASDRNNSEFKSSIKEQNNIEKVGSSDKRLKNHKRKEKDRAQTSRIEDKNKENLGGLIFMCSAKTKPDCFHYSVMGVSAGRKDTVLAIKPGLNLFLYDFDLRLLYGIYKASSSGGMKLEPKAFNGAFPAQVRFNVYKDCFPLPESIFKNAIQENYFEKHKFKVELSVKQVRKLSALFRPVGLLSSSASIGFLPKVPIRDRKVGRKVEDTRIRNSKSKGDARNDQSSSHGWDRHREEAPRHREEVPRELYVSEKDYRTYGLQVERRNLDPVPLPLPYLETYHRDHDRDYQLRYLEQPQREVVRSDNVHFNGKDYPVYSIDSRSQISRAISGSGSERPAYDPIYTHQYGLSSIVPYLLPSRRDEAAAPTYSRSYVADTEPMRHAAHALPYYNQAHHVNVESDIMPVSSRYSFPGPSFSYR
BLAST of Carg17566 vs. NCBI nr
Match: XP_022938143.1 (uncharacterized protein LOC111444319 [Cucurbita moschata]) HSP 1 Score: 894.4 bits (2310), Expect = 2.4e-256 Identity = 675/694 (97.26%), Postives = 683/694 (98.41%), Query Frame = 0
BLAST of Carg17566 vs. NCBI nr
Match: XP_023537261.1 (uncharacterized protein LOC111798389 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 855.5 bits (2209), Expect = 1.2e-244 Identity = 661/695 (95.11%), Postives = 674/695 (96.98%), Query Frame = 0
BLAST of Carg17566 vs. NCBI nr
Match: XP_022965623.1 (uncharacterized protein LOC111465465 [Cucurbita maxima]) HSP 1 Score: 793.1 bits (2047), Expect = 7.5e-226 Identity = 628/694 (90.49%), Postives = 643/694 (92.65%), Query Frame = 0
BLAST of Carg17566 vs. NCBI nr
Match: XP_022150770.1 (uncharacterized protein LOC111018835 [Momordica charantia] >XP_022150771.1 uncharacterized protein LOC111018835 [Momordica charantia]) HSP 1 Score: 562.8 bits (1449), Expect = 1.7e-156 Identity = 431/720 (59.86%), Postives = 471/720 (65.42%), Query Frame = 0
BLAST of Carg17566 vs. NCBI nr
Match: XP_011659868.1 (PREDICTED: uncharacterized protein LOC101215107 [Cucumis sativus]) HSP 1 Score: 524.6 bits (1350), Expect = 5.0e-145 Identity = 283/384 (73.70%), Postives = 312/384 (81.25%), Query Frame = 0
BLAST of Carg17566 vs. TAIR10
Match: AT2G32910.1 (DCD (Development and Cell Death) domain protein) HSP 1 Score: 203.8 bits (517), Expect = 3.5e-52 Identity = 154/394 (39.09%), Postives = 207/394 (52.54%), Query Frame = 0
BLAST of Carg17566 vs. TAIR10
Match: AT5G61910.1 (DCD (Development and Cell Death) domain protein) HSP 1 Score: 141.0 bits (354), Expect = 2.8e-33 Identity = 125/383 (32.64%), Postives = 172/383 (44.91%), Query Frame = 0
BLAST of Carg17566 vs. TAIR10
Match: AT2G35140.1 (DCD (Development and Cell Death) domain protein) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-20 Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Carg17566 vs. TAIR10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein) HSP 1 Score: 90.5 bits (223), Expect = 4.4e-18 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of Carg17566 vs. TAIR10
Match: AT5G01660.1 (Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915)) HSP 1 Score: 87.8 bits (216), Expect = 2.8e-17 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of Carg17566 vs. Swiss-Prot
Match: sp|P37707|B2_DAUCA (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 4.3e-15 Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of Carg17566 vs. TrEMBL
Match: tr|A0A1S4E0R4|A0A1S4E0R4_CUCME (uncharacterized protein LOC103499546 OS=Cucumis melo OX=3656 GN=LOC103499546 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 1.3e-141 Identity = 272/370 (73.51%), Postives = 300/370 (81.08%), Query Frame = 0
BLAST of Carg17566 vs. TrEMBL
Match: tr|A0A2N9EMR4|A0A2N9EMR4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3726 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 2.4e-87 Identity = 193/428 (45.09%), Postives = 265/428 (61.92%), Query Frame = 0
BLAST of Carg17566 vs. TrEMBL
Match: tr|A0A2N9GME5|A0A2N9GME5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28471 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 4.6e-86 Identity = 190/410 (46.34%), Postives = 257/410 (62.68%), Query Frame = 0
BLAST of Carg17566 vs. TrEMBL
Match: tr|A0A2N9EMG1|A0A2N9EMG1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3732 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 4.6e-86 Identity = 190/410 (46.34%), Postives = 257/410 (62.68%), Query Frame = 0
BLAST of Carg17566 vs. TrEMBL
Match: tr|A0A2P6R6H2|A0A2P6R6H2_ROSCH (Putative development/cell death domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0453261 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 9.8e-81 Identity = 178/356 (50.00%), Postives = 230/356 (64.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|