Carg17477 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17477
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	phosphate transporter 4;5
Location	Cucurbita_argyrosperma_scaffold_084 : 350128 .. 358386 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCGGTCTCCGTGTCGATGAATCGGGGCGAATTGGGTCTATTACGAAATCCGAAAACGATTCAAGCTATGGAAATGGATTGGATGAAGTGGGGTTTGATTCGGATTGGCCGCCCGTGGAAGAATGTTCCTGATGGATATAAATTGATTGGAACCCCGGCGCTTGCCTTCATTATTTGCAACATGGATAAGGTTCGTTCCTCTGTTTTTTTTTTTTTTTGTAAGTTTTGGATTTGATCGAATGAAATGTTGATCGGTTTTGACTTTCGTTATGATTTGTTCTGTTTTGAGATGTTTTTGTGTGCATTTGGGCTTTTTTTGTTGTTAGATCATTGGTTGCTAGAATTCAAATGTCGCGCCTGTTTGGGTGGAATTCTTCTGTGGCTGGATTGGTTATGCCTTGTGCCAGTTGCCTGGTCGGTGGCTTGCCAAGATATTTGGAGGGAGGTCAGTATTTAACTATCATTGTTAGCTGGTTTATTGTTTCTTTAGTGAACCCATTGTTTTCTGGTGTTTTACTTGATCATTGAATTCATTGGCTGAATATTAAGAACTATCAACCATTTTGCAGCTGGGCTTCTTCATAGGTTTCCTATAAATAGATTTTGTGATAGAAATTTTGAAGTGTTTGTTCGAGATGACTTGGTTCCTTTGCTTTTTTATAATGATTTTATTCTTTGTTTTTCACTTCTTAAAATTTGGCTATGGTTTCATCGTGGTTCATAGCAGCTGTTGATAATTTATCCTCTTTCTTACAACTAGAAACCATTCAAATTTAGGATTCTATCCTCCCACCCCAGGCTTGAATCATGGCGCTCTGTATCTGGAAGGTCTTGGTAGGCTGCAGGGGATCTCCCCTGATTTTGGGAAAGTTGGTGGCCGCGAGGGAAAGAGTTTGAGTTTGATGCGCCTGAACCAGGAACCATCCTTGTTGGCCGTTGTTCTGGTCGAGCACTCTCTTTTCAAGAAAGCCTTTATCAAACCAAAAGAACAATCTAATGATTGTCATCTTTAGAACTTCTCGAACGAGGAAAATGATCATCACTCTTGGTTAGGAACTCTTAGTCGAACTGATGGCGAGATCGGAGCTTCATTCTACAAGCATTCCTCTATTTGAATGAATTTTTTGAGTGACGAGCATTGCATCGCAGTTGACCGATAACTTGATTTCCAATGGGGTCGACGACAGTGTGGAAAGATGACACCCCAACAGTTTCTTTTCAAGAAACATTCCATTCATAATTTGTGTGATCCTCTTCTGTTTTCCTCCATGTAGGTAAGAAAGATTTCCCCAACACTTGCCTTTGTGTCCCCTGCAGTTTGCATGACTTGTACTCTTTTGATTTAGGATTACCTCCCTGTAGGAATATTAACCAGTGACTTGGCCCTCTCTAGTTTTGTGTTATCTGGTGACAGTCTCACGTCGACACGTTCAGTTCTCGGATTCTTTTTCGAAGTATTTGGATTGAAATTCCCATTTTCCATAAGGTACCAAGAGACTTTACTGTACTCATCAAGATACTGTCCTTCTCGTAAGTAAGCTCTATAATATCTCAATTCGTATTAACCTTAGTAGTTCATGAGGCCAATCTTAGTACGTCTCACCTTCAAAATTATCTTCAGGGCATTACGAACACCATCGAAGCAATACTCGGGATTGTATGAGTTGCTTTCACTGGCTTTCTTCTTGATTCAACTCATGGAGTTTTAAGTTGGCAACCTTTTTGTTCTATACCACGTTTTATATTCCTTTCGTATTCGTGGGCTTCTTTTAAGCAAATCATCAAAATTTCCCCTTTGTAATGTGTAGATCTCATTGACTGCATCTCCTCCCGCCAAAAACATCACAATAGAAAAAGTGGTTCTTGCATGATTTCGGTTTCGATGAGAATGAAAATAATTCAGCAACCCCAAACATCCCGTCAAGCGAAAGATGGAATTCCATAAAAGAATTTGAACTAGCCCAAGACCCGAATATTCGGAGGTCTTCGCTCTTTCTTCTGACCATCAATCTTTTCTTCTCCGGAGAATCTTGTCCACCTTCTTGATTTACTAGTGGAAACTAGGGATTCGTAAGAATGGCAAAAGAAGCGCTTTCACTGAAAATTACTCTTTGTCAAGACCGGAATAATCTTGCAAAAGGTGGATTATTCCCCGCCCCAAAACTGACCTGTTTGTATCTTTTGCTTATCATGCTACCAACAGAATGATTTTCCATTAGTAAATGTATTTGTTCACCTAGAAAAAGTTAACCAAATATGACAATTGTTTTCTCTTATTAGAAAATCACCAATCTGGAACTGATTTTCAGTTCCATACATCGCCTTCTATTCTATCTGCAAGCAGGGAGAACAATATTTGGCATGTGAATGAATACAATTGAAAAGGGAGCCACCATTATTGGTTCAGATGAATTTACATACTGAGGTTCCAATGAAGGTATGTTCCCTGATGAGTTTACAGACAAAATCTTTCCATTTAGCAGCATAGTTTGACTATGCAGGTTCCCATCCTTAGCTGTTAGATGATATTCCTCTCTGAACACTTCGCCTTCAATACCATGAGGTCGAGGTATTCGAATGACCTTCGGTTTATGGTTATAGGATCTGCGTTTATGGTGCAACCGTCTCGTTCTGTTGTATGAAATTGCAGCATGAACTGTGGTATTACTGTCTAGGTTGAGCAGTAATAACGTGAATCCTTTCTGTAAGATTGAAAAGTTGAATCAGAGTCTAGAAACTCGTGTCATTTACTCGTTTTCTTGTTTTTGCATTCGGTTATATGGATTTCCACTTACAGACTGCTTAGAACAATGTGCATACGCTCGTATTTTCTTCGTCCCGTTAAAGCTTGTGGACAGAACATTTCTTCCCATCAAGCGATGCCATAGGAGTGCACTGAAATGAAGAAAGGGAAAGAAACAGGCAACGCTAATCGTTATGATCGTTGTCTAATAGCAACGGGGAAGAAATGAAGCATTTGAGGTCGGAAATATTGCTTCTGGTTGAAGCAACCTTCAGTACAGAAATTCCAATAGTACTCACCTGTAATAGTCTGGATTTGGTTCGAAGGTGGTCGTGTTCAGTAAACCATAGTTTCCACCGATCAATGTTTGCCTGCAGTACGTTTTCGTATCGAAGGCAGCCGACATACCCAGCTGGTCCAAGTACCTGAATAAAGTACACACATAAAAGAGCTATTTAGAATGAAAAGGTCTTAAAACAACCACACATGGATGGTTTCCAGAATCTAGATTACCAGAAACTAAAGACAAATGCATTTGTGACCAGATTATGGCCACTGTTGTAAGCCCCTCCCGCTTCCCCAACCCATGCTTTAGCTGAAGTAGGCGAGTTTCTTAGGATCTCATGGAGCTTGTAGAATGTATCGGCCATACCGTCGAGATAGGATGGGTCAAGAATCCTTTCGACAAGATGCTCATCGACTCCTGTTGACAAGAAATAGGTTCGGTGTGAACACACTTTGGACATGAAACTTCATAAAACTCTTATTTGGCCAATGGATGATACCTGGTCCTAGATTGTATATATGGTGTGTGACAACATCTAGTGATTGAGTTGTTTTGTCAATGAATTCCTTGAACCAATTTTCATCAAAGAATCCTCCAGGAGATATGATTAACGGCTTATATTCAATATCCTTGTAGATACTTTGGACCATGTTCTGAAGAGCAATTGTATCAGACGCATACTGCTCTGCGGTGACTCTTGTTCCAACTCCATTCCCACTCAATTCATTTCCTAAGCATAAGGAAACGGATAATCAATCATAAATTGGAACATATGAATCCTTATGAGTTATATGAGATGAACTAACAAGAATCCAATTCTCTATTTCTGTTTACGTGAGATCCCACAATCCCACATTGGTTGGAGAGGAGAACAAAACACCCTTTATATATAAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAAATTTTAAGGGGAAGCTCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAATGGTGGGCTTGGGTCGTTACAAATGGTATTAGAGCCAGACTCCGGGCGATGTGCCAACGAGGAGGCTATTCCCTGAAGGGGGGTAGTAGACATAAGGTGGTGTGCCAGTAAGGACGTTGGGCCCCGAAAGGGGGTGGATCTGGTGGGTCTCGATTGGAGAAAGGAATGAGTGTCAACAAGGACGTTTGGTCCTGAATGGGGGTGGATTGTGAGATCCCACAATCCCACATTGGTTGGGGAGGAGAACGAAACACCTTTTATAAGGATGTAGAAACCTTCCCTTAGCAGACTCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGGGTCGTTACAGTTTAGTACAACCATAATAGGATATGATATCGAGCATCAAGAGAACAAGTAGCAGTTCTTACCGAGCTCCCAACCATGAATTGTGTAGTTCTTTTTGACAGTATAGCGTATGAACAATTCAGCATTCGTGTGATCCCAAGCTCCTACAGCAGACCCATCCGACGCAATTTGTCGTCCATTGAGAGCGTTTAATCCAAAGATAACCTTCACTCTGAATCGACTCAAATAGCTTCAGCATTCAACTTTTGTGAAATCCAACATTATAAGAGCAAAATAGGATGAAACTTTCATTACCCTCCTTTCTTGAAGAACTCATTCAGTTCATCCCATCTTTTAGTTGATAAGCAACCTTGACTGTAACCAAATAATTCTGTGGTGTTTCTTGATAAATAAACACATGACTGCTGGTGATCTTCAGTTTCATATATGATCTTATCTTGCAAAGTACCACCCAATCTAAGCTTGAGGGGTTTAAATTCTGCACCATTCATGAAAAGCTATTAGTTCTAGTTCGAGAAGACTTGACCCGTGTTCGAATCGAACTTGTGAAACCTACCTTTTATGTTAGAATGTTAAATATGAACTTTTCGAACTCGTAAACGTACGAATCTGACACAGATTATATAAACATAGATCTTTGTAGTCCATCTAGACTTATTAGGCATAAAAAAATCCAAACCTTTGACTGCATTTAATAGAACGTTGTTGCCCAGATCCTGCAATTGAAAGACAAACAACAGGAACTTAAATATTTTAAGTACAGCTCTAGATAGATCATAGGAAGACATTAAATAGTCAAGACCTTATAAGAATGATACACGAAATGCAAGAACATCAAAGAACCTTCACTTTTCATAAGCAATAAATACACAAATCATGAACACTTCAGATGCCAAAACTTGAAAGTACCACAAAAAAGACATCAACCTTTCATAAGAACAGACGTAGATCGATATGAATGAGCTTGAGAATCATTAGAAGTGTTTGAAAAGGTTACCAGATTGAGCAGAGAAGCTCGTCCCCAGCTGCAGGTTCCATAATCGCATTTCTCAGGAGGCCACCAATCAAGCGTAGCACAAACGAAATCTTCATCGATACCTCCAATGGCGGATTTCCCATCGATCAAAACCCTCCCTCGCACAAACCCATCTTCTTCCAAACCCAAACCCTTGGAGTTCACAGAGCCACAAAACAAGAAACAGACCCAAAAACAAAACCCCACGAGCCAAACACGAAAACCCATTACCAAAAACTGGCTGAAATGGCGGACAAAGCTCAAAGGACAGAGGAGAATCCCATTAATAAAGGGAAGAAGAGGGAGTGTGAGGAAAGGAAGAAACGAATATAGAGTGAAGAGAACTTATAGAGACTTGGAAACTAAGAAATGAAGAAGAAATTAATGGAGCATTTAACGACATGGATGGCAGATCTGCATTAAAGAAATGGCAGAAATGAAACCCATCTGTGATTTTCTTTTGCTTTTGTGCCTCTTCTAGTGAAGGTAATGCTCTGTTCTTCTTTTCTTTGATGGAGAGATTATGAAGAATGCTTAGAAAATGGGGGAATTTGGTAGTGATTTTGACAAGCTTTTGGTTTCTTTTTGGCTTTGAACTCACTCTATGTGCTTTTATGAGCTCTGCCATTTCAACTAATTTCTCTTCTTTCACTGTTCTTGTTTCCATCTTTCTAAATTTTGAACTAATTCCAATGTTAGCTATCTTTAATGGATGAATTTAATTCATTTTTTATGCATATATATTAAACTATTTCTGTATTTAGTTCGGAAACGCGAACGTTGTGACATGGGTCTTTCACGGTTTTGAAATTTTAAGTTGGTTCGGTAAGTCCCAGAACACCTAAGACAAGTATGTCAAACTAAAGATAATGAAACTTATCGTCCACTGAAGCTTTGTACCTAACTAAACCAAATACATGCTAGACCAAATTCTCTCTCAGTCACTCTTCATTCCCTAATTCTTTCGAAAAACAAGGCATCTCATCTCGCTCGAGAACGAAAAGGGTGCTTTTTTACTCAAATTCTTAGGCTCGAGAACGAAAGATATTTTATGCCATTAGATTAGGGTTTTTTTGGGTTAGATTGTGACCTTAGAGGAGATATGTTGAGCCATGCACCTCCACCCAAAAAGAAAAAGTTGATCACAGGTCATATTAGAGTGCATAAAATAAAAATTTTGAAAAAAGCTTTTTTTAGAAGAAAATTTGGATAATAATTGAATAAAGTAACCAAACATGTGATCTTTGTATAAATCATGACCAAACAGATCAAGTTGGACAGCTACCCAGATTTTTTTTATTAAAAAGTTTGTTCTTTTTGCCCTTTTTTTAATTATTATTATTGTTTCTTTTAATCGAATGATCGAGGTTCAAGAGCTTAGAACATTAAAATATTGTGCTAAGAAATTCACTAGGGACACCCTTTTGATCTTAAAATATTAGTTTACGGAGAAGTAAAATTGTTTTTTTTTTTTTTTTAAATTCATTACCCTAAACCTTAAACCCTAAACCCGAGATTAAATAGTTTATTGAGGATCATAGGTACATTCAATTTAGGGTTTTATTGTAATGTTTTTATAAAAAGAAGAGTTCGAAAAATTCAAAATATAATTTCTCAATCTTCCACTCGACCAATTATTTTGATGATATGGTTGAAAGATAGGGTGGGTGACCTAACTCGGGTCAAACTTTGGGTAGTTATTTAGGCATCTATGTTTCTCCGACCTAATTTTATCCACTAAATTTTTTAGAATTCTTTAAAGCTACTCCATTCTTAGACCGTGCTCCAAAAGTCGGGGATAATTATTCTTCAATAACACTTACAATGGTACATCGGCTTAGTAACGTAGCCCTCAACCAAGCTGAGTATATGACTTAGTAGCTTACTCTCTCAACCAGGGAGTAGCTTCTTCGGTCGAGTGGTTAGAGGTTACAGTATATGATTTGTAACTTAAAGTTGATGTCTTAAGAACACTTAACCCTTTATACGATAAGGGCATAGGAGTCGTATCTAAAATATCTGTGATATCCCACATTAGTTGGAGAGGAGAACGGAACCCCCTTTATAAGGGTGTGGAAACCTTCCCTTAGCAGACGGGTTTTAAAGCTTTGAGTGGAAGCCTGAAGGGTGTGAAAACCTTCCCAAAGAGGACAATGTCTGCTAACGGTAGATCTGGGTCGTTACAATATCAAATCTCGAGAACAATTTTAACAAGATTACGACCTTGTTTGGAACAACTTTTATGTGTTATAATGTTCTTAAACAGTAAAAAGGTTATTTTAAACCTAGTCTACAAAAATCGACAACATTACATTATTTATGTTCGTGAGATCACATTTTAATGTATCTTTTACTTAATAGCCTGGTACGTTATTCAATAAATGTTTAGTATGTATGTACTATATCATTTATTAGGCAATAGATCTGACATGGCATTTATGATCGAGGAATGGGAAACATATCATACCTTGTTTTCTTCATTTATGTCGGGCTTTTCATATTTTCTATCTTTTAAGATATTTATTTATTTTTATCTTAGATTTCGATGCTTATTCAATTTAAAACAACTAAGATCATTAAAAGAAAATTTCGTGTTTCAGTTGGTTGCAGGTTACAGTACCGAGAGCCTTCAGTAAAGGTAGTCATGTATATCTCGATAGTAGCTAATAGAGTATGAACAATTACACGAAAGATGTTCAATATCGATTCTTACTTATCTTTCTATCTTCGATAAAAAGAATTATTTTCTTCGGTGAAAGAAGAAGGATGGACGGTTGCTGCGGGGAAGCTTAACTCACAATCAGGCACGGGATGATCTATAG

mRNA sequence

ATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCGGTCTCCGTGTCGATGAATCGGGGCGAATTGGGTCTATTACGAAATCCGAAAACGATTCAAGCTATGGAAATGGATTGGATGAAGTGGGGTTTGATTCGGATTGGCCGCCCGTGGAAGAATGTTCCTGATGGATATAAATTGATTGGAACCCCGGCGCTTGCCTTCATTATTTGCAACATGGATAAGAATTCAAATGTCGCGCCTGTTTGGGTGGAATTCTTCTGTGGCTGGATTGGTTATGCCTTGTGCCAGTTGCCTGGTCGGTGGCTTGCCAAGATATTTGGAGGGAGGTTACAGTACCGAGAGCCTTCAGTAAAGAAGAAGGATGGACGGTTGCTGCGGGGAAGCTTAACTCACAATCAGGCACGGGATGATCTATAG

Coding sequence (CDS)

ATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCGGTCTCCGTGTCGATGAATCGGGGCGAATTGGGTCTATTACGAAATCCGAAAACGATTCAAGCTATGGAAATGGATTGGATGAAGTGGGGTTTGATTCGGATTGGCCGCCCGTGGAAGAATGTTCCTGATGGATATAAATTGATTGGAACCCCGGCGCTTGCCTTCATTATTTGCAACATGGATAAGAATTCAAATGTCGCGCCTGTTTGGGTGGAATTCTTCTGTGGCTGGATTGGTTATGCCTTGTGCCAGTTGCCTGGTCGGTGGCTTGCCAAGATATTTGGAGGGAGGTTACAGTACCGAGAGCCTTCAGTAAAGAAGAAGGATGGACGGTTGCTGCGGGGAAGCTTAACTCACAATCAGGCACGGGATGATCTATAG

Protein sequence

MSRSTKRFPLFFSVSVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDKNSNVAPVWVEFFCGWIGYALCQLPGRWLAKIFGGRLQYREPSVKKKDGRLLRGSLTHNQARDDL

Homology

[Close]

BLAST of Carg17477 vs. NCBI nr
Match: XP_018856006.1 (PREDICTED: probable anion transporter 1, chloroplastic [Juglans regia])

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PWKN+PD YKLIGT +LAF+ICNMDK N ++A + +    GW              GYAL
Sbjct: 103 PWKNIPDRYKLIGTTSLAFVICNMDKVNLSIAIIPMSHQFGWNSSVAGLVQSSFFWGYAL 162

Query: 110 CQLPGRWLAKIFGGRL 112
            QLPG WLAKIFGGRL
Sbjct: 163 SQLPGGWLAKIFGGRL 178

[Close]

BLAST of Carg17477 vs. NCBI nr
Match: XP_022143031.1 (probable anion transporter 6, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 43  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW------ 102
           G++ +G      PWKNVP+ YKLIGT ALAF+ICNMDK N +VA + +    GW      
Sbjct: 93  GVVEVGSDANWPPWKNVPERYKLIGTTALAFVICNMDKVNLSVAIIPMSHQFGWNSSVAG 152

Query: 103 -------IGYALCQLPGRWLAKIFGGR 111
                   GYAL QLPG WLAKIFGGR
Sbjct: 153 LVQSSFFWGYALSQLPGGWLAKIFGGR 179

[Close]

BLAST of Carg17477 vs. NCBI nr
Match: XP_022143032.1 (probable anion transporter 6, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 43  GLIRIGR-----PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW------ 102
           G++ +G      PWKNVP+ YKLIGT ALAF+ICNMDK N +VA + +    GW      
Sbjct: 93  GVVEVGSDANWPPWKNVPERYKLIGTTALAFVICNMDKVNLSVAIIPMSHQFGWNSSVAG 152

Query: 103 -------IGYALCQLPGRWLAKIFGGR 111
                   GYAL QLPG WLAKIFGGR
Sbjct: 153 LVQSSFFWGYALSQLPGGWLAKIFGGR 179

[Close]

BLAST of Carg17477 vs. NCBI nr
Match: XP_022946155.1 (probable anion transporter 6, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-13
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PWKNVPD YK+IGT ALAF+ICNMDK N +VA + +    GW              GYAL
Sbjct: 104 PWKNVPDRYKMIGTTALAFVICNMDKVNLSVAIIPMSHQFGWNSSVAGLVQSSFFWGYAL 163

Query: 110 CQLPGRWLAKIFGGR 111
            QLPG WLAKIFGGR
Sbjct: 164 SQLPGGWLAKIFGGR 178

[Close]

BLAST of Carg17477 vs. NCBI nr
Match: XP_022946154.1 (probable anion transporter 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-13
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PWKNVPD YK+IGT ALAF+ICNMDK N +VA + +    GW              GYAL
Sbjct: 104 PWKNVPDRYKMIGTTALAFVICNMDKVNLSVAIIPMSHQFGWNSSVAGLVQSSFFWGYAL 163

Query: 110 CQLPGRWLAKIFGGR 111
            QLPG WLAKIFGGR
Sbjct: 164 SQLPGGWLAKIFGGR 178

[Close]

BLAST of Carg17477 vs. TAIR10
Match: AT5G20380.1 (phosphate transporter 4;5)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYAL 109
           PWKN+P  YKLIG  +LAF+ICNMDK N ++A + +    GW              GYAL
Sbjct: 91  PWKNIPQRYKLIGATSLAFVICNMDKVNLSIAIIPMSHQFGWSSSVAGLVQSSFFWGYAL 150

Query: 110 CQLPGRWLAKIFGGR 111
            QLPG WL+KIFGGR
Sbjct: 151 SQLPGGWLSKIFGGR 165

[Close]

BLAST of Carg17477 vs. Swiss-Prot
Match: sp|Q3E9A0|ANTR6_ARATH (Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ANTR6 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-14
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGWI-------------GYAL 109
           PWKN+P  YKLIG  +LAF+ICNMDK N ++A + +    GW              GYAL
Sbjct: 91  PWKNIPQRYKLIGATSLAFVICNMDKVNLSIAIIPMSHQFGWSSSVAGLVQSSFFWGYAL 150

Query: 110 CQLPGRWLAKIFGGR 111
            QLPG WL+KIFGGR
Sbjct: 151 SQLPGGWLSKIFGGR 165

[Close]

BLAST of Carg17477 vs. TrEMBL
Match: tr|A0A2I4HIL5|A0A2I4HIL5_9ROSI (probable anion transporter 1, chloroplastic OS=Juglans regia OX=51240 GN=LOC109018304 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-13
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PWKN+PD YKLIGT +LAF+ICNMDK N ++A + +    GW              GYAL
Sbjct: 103 PWKNIPDRYKLIGTTSLAFVICNMDKVNLSIAIIPMSHQFGWNSSVAGLVQSSFFWGYAL 162

Query: 110 CQLPGRWLAKIFGGRL 112
            QLPG WLAKIFGGRL
Sbjct: 163 SQLPGGWLAKIFGGRL 178

[Close]

BLAST of Carg17477 vs. TrEMBL
Match: tr|A0A2P6RIM1|A0A2P6RIM1_ROSCH (Putative major facilitator superfamily OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0087161 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13
Identity = 49/110 (44.55%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 15  SVSMNRGELGLLRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMD 74
           S S + GE GL      +   ++DW          PWKN+P  YKLIGT +LAF+ICNMD
Sbjct: 77  SGSDSEGESGLESGSGAV-GFDLDW---------PPWKNIPQRYKLIGTTSLAFVICNMD 136

Query: 75  K-NSNVAPVWVEFFCGWI-------------GYALCQLPGRWLAKIFGGR 111
           K N ++A + +    GW              GYAL QLPG WLAKIFGGR
Sbjct: 137 KVNLSIAIIPMSHQFGWSSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 176

[Close]

BLAST of Carg17477 vs. TrEMBL
Match: tr|A0A1S3C6C9|A0A1S3C6C9_CUCME (probable anion transporter 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496964 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PW+NVPD YKLIGT ALAF+ICNMDK N +VA + +    GW              GYAL
Sbjct: 102 PWRNVPDRYKLIGTTALAFVICNMDKVNLSVAIIPMSHQFGWNSSVAGLVQSSFFWGYAL 161

Query: 110 CQLPGRWLAKIFGGR 111
            QLPG WLAKIFGGR
Sbjct: 162 SQLPGGWLAKIFGGR 176

[Close]

BLAST of Carg17477 vs. TrEMBL
Match: tr|B9T601|B9T601_RICCO (Inner membrane transport protein yjjL, putative OS=Ricinus communis OX=3988 GN=RCOM_0667030 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.0e-13
Identity = 47/99 (47.47%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 26  LRNPKTIQAMEMDWMKWGLIRIGRPWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWV 85
           L N   +Q +  DW  W       PWKN+P  YKLIGT +LAF+ICNMDK N +VA + +
Sbjct: 86  LGNDSGLQEVGFDW-NW------PPWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPM 145

Query: 86  EFFCGW-------------IGYALCQLPGRWLAKIFGGR 111
               GW              GYAL QLPG WL+KIFGGR
Sbjct: 146 SHQFGWNASMAGLVQSSFFWGYALSQLPGGWLSKIFGGR 177

[Close]

BLAST of Carg17477 vs. TrEMBL
Match: tr|V4UJN4|V4UJN4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007933mg PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.9e-13
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 50  PWKNVPDGYKLIGTPALAFIICNMDK-NSNVAPVWVEFFCGW-------------IGYAL 109
           PWKN+P  YKLIGT +LAF+ICNMDK N +VA + +    GW              GYAL
Sbjct: 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYAL 164

Query: 110 CQLPGRWLAKIFGGRLQYREPSVKK 121
            QLPG WLAKIFGGR  + E  +KK
Sbjct: 165 SQLPGGWLAKIFGGRFVF-ETLIKK 188

The following BLAST results are available for this feature:

BLAST of Carg17477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_018856006.1	2.0e-13	56.58	PREDICTED: probable anion transporter 1, chloroplastic [Juglans regia]	[more]
XP_022143031.1	2.0e-13	52.87	probable anion transporter 6, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_022143032.1	2.0e-13	52.87	probable anion transporter 6, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022946155.1	2.7e-13	58.67	probable anion transporter 6, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_022946154.1	2.7e-13	58.67	probable anion transporter 6, chloroplastic isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg17477 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20380.1	3.4e-15	52.00	phosphate transporter 4;5	[more]

BLAST of Carg17477 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3E9A0\|ANTR6_ARATH	6.2e-14	52.00	Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Carg17477 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4HIL5\|A0A2I4HIL5_9ROSI	1.3e-13	56.58	probable anion transporter 1, chloroplastic OS=Juglans regia OX=51240 GN=LOC1090...	[more]
tr\|A0A2P6RIM1\|A0A2P6RIM1_ROSCH	1.8e-13	44.55	Putative major facilitator superfamily OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch...	[more]
tr\|A0A1S3C6C9\|A0A1S3C6C9_CUCME	2.3e-13	58.67	probable anion transporter 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|B9T601\|B9T601_RICCO	3.0e-13	47.47	Inner membrane transport protein yjjL, putative OS=Ricinus communis OX=3988 GN=R...	[more]
tr\|V4UJN4\|V4UJN4_9ROSI	3.9e-13	52.94	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007933mg PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17477-RA	Carg17477-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11662	SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS	coord: 34..110
None	No IPR available	PANTHER	PTHR11662:SF243	ANION TRANSPORTER 6, CHLOROPLASTIC-RELATED	coord: 34..110

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17477	Carg10933	Silver-seed gourd	carcarB296

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17477	Cucumber (Gy14) v2	carcgybB0269
Carg17477	Cucumber (Gy14) v1	carcgyB0300
Carg17477	Cucurbita maxima (Rimu)	carcmaB0356
Carg17477	Cucurbita maxima (Rimu)	carcmaB0355
Carg17477	Cucurbita moschata (Rifu)	carcmoB0356
Carg17477	Cucurbita moschata (Rifu)	carcmoB0357
Carg17477	Cucurbita pepo (Zucchini)	carcpeB0362
Carg17477	Cucurbita pepo (Zucchini)	carcpeB0357
Carg17477	Wild cucumber (PI 183967)	carcpiB0286
Carg17477	Cucumber (Chinese Long) v2	carcuB0282
Carg17477	Cucumber (Chinese Long) v3	carcucB0286
Carg17477	Bottle gourd (USVL1VR-Ls)	carlsiB226
Carg17477	Bottle gourd (USVL1VR-Ls)	carlsiB227
Carg17477	Melon (DHL92) v3.5.1	carmeB0258
Carg17477	Melon (DHL92) v3.5.1	carmeB0259
Carg17477	Melon (DHL92) v3.6.1	carmedB0268
Carg17477	Melon (DHL92) v3.6.1	carmedB0269
Carg17477	Watermelon (Charleston Gray)	carwcgB0244
Carg17477	Watermelon (Charleston Gray)	carwcgB0246
Carg17477	Watermelon (97103) v1	carwmB0241
Carg17477	Watermelon (97103) v1	carwmB0243
Carg17477	Watermelon (97103) v2	carwmbB0258
Carg17477	Wax gourd	carwgoB0331