Carg17435 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17435
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein At5g03970
Location	Cucurbita_argyrosperma_scaffold_084 : 51766 .. 56680 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAACGCAAAAAATTCTCCCATTGCGGCGGCTTCTACTTCTTCAAGCAATCGCCCATCAGGCAGAGGTGATCGCTTTCATAATCGCTATCAATAATTTTTGAAATCCATTTTTTGGGTTGATTCTTGTCAAATGCAGATGGGTTTCGATTCTCGTGTTCATCTTTGCATTCCAACATTCATTCGTGTTCATCTTTGGGTTTCTCGTTGATGTTTGATTTTCATGAGATTGTCTGTTTTTTGATCGTGTTTCTTCTGGGTGTAATGTGATTCTCAGGTTTGAGGTGTTATGGGTCTGTGATGATATATACATATATGTTTTTGCACGATTTCGAGGCGTTTAATGTTGCATTGTGTACTCTGTTCTTGGCTGGACAATATTATGTCATCTTCGTTAGATTTGTTCATTTTGGTGTTCAGCAGACGTATTGAACTGATACTCAACGTGGGATTGACACCAAATTAGTTCAAGAGATTGCATCCTATGTGAATTTGTACTATTAGTTTTGCTTTTAGTATTTTTTTTGAATAGCTAAGGTGTTGGGACCTCAGTTCTTGTATGTGTTAGGAACCACGACTCTCCATAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGTTTTGTTTATGGTTTTCTCAAAAGGTCTCGTACCGATAGAGATGTATTCCTTACTTATAAACTCATGATCAACCCCTTAATTAGCCGATATAGGACTCCTCAACGTTATGCTCATGGCCTATCCCACTAATCTCTGGGAAGCTTTGCTTGCCTGAGAGCGCCCTACAGAGAGGGAGGAGATTTCGTAGTGATTATGTTTTCAATTTGGAGCTTTGTAACAGTTCAAACCCACTAGCAAATATTGTCCGCTTTGACCCGTTAGGTATCACTTTCAGCCTCACAGTTTTAAAAACGTGTCTACTAAAGAGAGATTTCCATACTCTTATAAGGAATGTTTTGTTTCCCTCTCCAACTGATGTGGGATCTCACAGACTTGAACCTTGAACGTTGGACCCTTCTCTTTGATAACCATTTATAATGCTTGGATGAAGTTTTCTACTTACCCTTTAATCGTTCTCTTTGATGAGAGCTAGAAATGTCGAGTTGATTAACTCGACAATGAAGTAGGAATACTTTAGAAACGATGAGAGAACTTTCATGAAGCTGCCTTGACTTCCATTAGGAATCAGGATCTTTGTTCAAGGTGGAAACTAACTCCTTTGAAGGGATCAAATTTGTAGTTCATCCTTTTGGTTGAATCATGTGGCTCGGTTCAGTGTCATCCTTCATATTTGTTGGTAACAATTTGCTTGTTCTTATGGGTTATGATTCTTATAAGTTTTGGATGACTAAAGATGCAATAAAAGCTCATGATATTAAATGTTTTGATTCATGATGCAAGTATAATCATGGAATGCCATTTTGTTGGTCCCTAAGGGGTTCTAATGTTTAATCTGTCTCTTGTAGCTCTGTATTTAACTCTTTGTTATTCGGCGCTCGATACTAAAACGTTGCATTAATGGTTAAACAAGTTATGACAGTACTTTTATGATGATGAGGAAGCATACTCCCGTAAGCATCGTCGTTAAGAATATCGTCAATGTCAGATTTTTATTGTTCTGGTTGTGATTGATTTGCATTCCTGAAGTTTCATTAAGTAGCTTTTTGTTGTTCATCAGTATGTTGTGTTATAACAACTTGAGCTCATATATGAGTCTGTCATCATCGTAACAGCTGAAATCCATCACTAGCAAATATTGTCCTCGTTGAGCGTTTCCTTCAAGGTTTTAAAACGAGTCTGTTAGAGAGAGGTTTTGACACTCTTATAAGGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTTGCAATCCACCTCCTTTGGTGGCCCAACGTCCTTGCTAGCACACTGTCGGGTGTCTGGGTCTGATACCATTTGTAACAGCCCACATCGGTTGGAGAGGAGAACGAAGTAGAAATCTCTCCCTAACGGACGTGTTTTAAAACCTTGAGGGGAAATGCAGAAGGGAAAGGCCAAAGAGACAATATCTACTGGCGGTGTGCTTGGGCCTATGAACGTTTTAATCTTTTTGATCTTCTATTTATTACTGAACTTTCACATTCCAGTTGAATTCATTGCATATATCTGTGGCTGTCATATGTGAAATGCAGTACATCTTAACTTGATAGCAAATGAATATGTATAGGCTATAATGGACGCTTCTACAGATTTAGAGGGAGGAAAATGGTTAGTGATAGTATTCATTCAGCTTTGGCATGTGACGACATCCTCACCGAAATCCTCCTCCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGTCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTCGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATTGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCGAAACAGAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATTTATCGAAACTCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTGCCTTACTTTCAGAAGATATGGCCTTATTCCCCTTTCCCTCACCCCTCGAACACTTTTAATAATTGATATCAACCATGAGATGCCTGTTTCTTCTTTTGTTAATGATCATTGTGCTTGATTGCCATTTGTTTTGTAAGATTTTAAAAGTTCATCGCTATCAAGTATTGTCCGTTTTGGTCCGTTACGTATCGTCGTCCCGTCCCACGATTTTTAAAACGGGTCTGTTAGGGAGAAGCCTAGGCTAGTAGAGAGGCGTCCGTCTCGCAGTTTTTAAAATGCGTTTATTAGGGAGAGGCCTAAGCTAGGAGAGAAAGACGTTCATCTCACAGTTTTTAAAATACGTCTGTTAAGGAGCGTCCATCAAACGGTTTTTAAAATGCCTCTGTTAGGGAGAGGCCTAGGCTAGTAGGGAGAGGCGTCCATCACATAGTTTTTAAAATGCGTTTGTCTGTTAGGGGGTTTTTAAAACACGTTTGTTAGGGAGAGACCTAGGCTAGCAGAGAGAGGCGTCCATCACACGGTTTTTAAAATGCCTCTGTTAGGGAGAGGCCTAGGCTAGTTAGGGAGAGGCCTAGGCTAGTAGAGAGAGGCGTCCATCACATGGTTTTTAAAACACGTCTGTTAGGGAAAGACCTAGGCTAGCAGAGAGAGGTGTCCATCGTGTCCATCTCACGGTTTTTAAAACTCGTCTGTTAGGGAAAGGCCTAGGCTAGAAGAGAGAGGCGTCCTCTATTAGGGAGAGGCCTAGGCTAGTAGAGAGAGGCGTCCATCTCACGGTTTTTAAAACACGTCTGTTAGGGAGAGGCCTAGGCTAGCAGAGAGAGGCGTCGTCTTGGGCTAATAGAGAGAGGCGTCGTCTTGGGCTAGTAGAGAAAGGTTTCCACACCCTTATAAGAGCCCAGCGTCCTCGCGTGCTGAGACTCCCCATTGTAAAACCATAGTCTAACAACTCATGCCGGAGATTCGGAATTCAGATTTAGCACCTGATGGGCCTATCATTCCCTTACATCCTCTACGACATGGTCATATTACCTATTTCTCAATTCTTAAGAGTGAAAACTATCCCTATAGACCAACACGACCCCTTCCAGCATGTTTTGTTCTTACTCACATGCATCTTAGGAAAATTTTCAAGAAATCACCCAACATAGAATTGCTCCAAGTACGTTTAACTATGAAGTTCTTATGATCAAATAATCGAAAAGGAAGGTACATCTGGCTGATATAGGTAGTAACTTTCATTTCCTTTAAGACTTTCTTAGTCATTATATCCTCAAGATCACTCTCATTTGAATATAGTCTCGGTTTATTCATGTACCCTTCTTTTATACCCTTCTTTTATTTGGGTGTCACACATAGAGACCAAATTTGCAACTTAACCGATCTTTAACGATCAATAATATCCCTGGCTTGTATTTATTTGATCTCTAAATTGTTAAAAATATCTAGCAAGCCCGTTGAACGTTTTCAAGAAACGTCTAATATATCTTTCAAATTTTATGTCCATTAGGTTCCCGAACTCTAA

mRNA sequence

ATGCCTAACGCAAAAAATTCTCCCATTGCGGCGGCTTCTACTTCTTCAAGCAATCGCCCATCAGGCAGAGCTTTGGCATGTGACGACATCCTCACCGAAATCCTCCTCCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGTCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTCGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATTGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCGAAACAGAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATTTATCGAAACTCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTTCCCGAACTCTAA

Coding sequence (CDS)

ATGCCTAACGCAAAAAATTCTCCCATTGCGGCGGCTTCTACTTCTTCAAGCAATCGCCCATCAGGCAGAGCTTTGGCATGTGACGACATCCTCACCGAAATCCTCCTCCGTTTACCGGAGAAACATGTTTTCAAATTTATACTCGTGTCGAAAAAATGGCTATACCTGATCTGTGATTTACCTTTCCGACGTTGTTACGAGATGCAATGGGGCACACACACTCGTCTTTTTGGCTTTTTTGTATGCAATCTTCTTTACATTGACAGACCACAAGGCGGGTTGAGGCGCCCACGGTACGAGCCTGCTCTACCTCTACTTTCAACATGTAAAGAAGGTGATGATTTAATGTCATCTGGATTCTTAAGGAAGCTAGGCTATTTTATTGACTACTCTGATGGCCTTGTGCTCTGTGGTCGACATCCTAAGAATTATTATGTCTGGAATTCTGTCACGAAGTATCGATGCCTTCTTCCTCAACCTCGAAAGCATTATAAATGTCTATGTATCGCGTTCATCACTGAAAACCGTGGTGAAGCTGACGGAGATATGGTATATAGAATCGTTCGGGCGAGCTGTGAATGCAAAGTTGATGTTATTAACACCATCTCTATAGAGACTTTCTCCTCAATGACTTGGACATGGAAGCAATCAACTCTCGTTTGTTCTTCAGATTTTTCTTTGAGTCCATGGACGGTGGGAACCGTGATTGACCAAGTTATATACTGGTTCGGAACGTATCGAAGCTTAGCCATTTATGATCCGGGATTCAGAGAAAGGAGCATAAACTCGATCAAGCTACCGGTTGGTCAGCTGACTTATGACTATGAGGACTCCATTTTAGGTGAGTCATCTGATGGGCTTTTGCAGTATGGTCAAAGTGGAAAGATGGGGTTGGAGATATGGATTCTGTACAAGGAGCAAGCTACCGTTACCGATCGATACGAGTACCGGTGGACGTTACGACACAGACTGAGCAGCAAAGAGATGTCGAAACAGAACCCGAATTCAGGTATTCGTACTAAAGAACCTCAAGTATTATCGTTCATTTATCGAAACTCGGAATCTGTTTTCATTCGATTGGGATCGAACATCTACCTTTGTAATATCAGAAGCAAAACACTGGCTGTGATTCCTTACCACTGTGATGGTGTATCTATCCCATGGGATTCTTGTAAAGTGGTTCCCGAACTCTAA

Protein sequence

MPNAKNSPIAAASTSSSNRPSGRALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVPEL

Homology

[Close]

BLAST of Carg17435 vs. NCBI nr
Match: XP_022937924.1 (F-box protein At5g03970-like [Cucurbita moschata])

HSP 1 Score: 810.4 bits (2092), Expect = 2.6e-231
Identity = 393/416 (94.47%), Postives = 393/416 (94.47%), Query Frame = 0


Query: 1   MPNAKNSPIAAASTSSSNRPSGR---------------------ALACDDILTEILLRLP 60
           MPNAKNSPIAAASTSSSNRPSGR                     ALACDDILTEILLRLP
Sbjct: 1   MPNAKNSPIAAASTSSSNRPSGRGYNGRFSRYRGRKMVSDSIHSALACDDILTEILLRLP 60

Query: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY 120
           EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY
Sbjct: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY 120

Query: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ 180
           EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ
Sbjct: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ 180

Query: 181 PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL 240
           PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL
Sbjct: 181 PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL 240

Query: 241 VCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSI 300
           VCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSI
Sbjct: 241 VCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSI 300

Query: 301 LGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKQNPNSGIR 360
           LGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSK NPNSGIR
Sbjct: 301 LGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKHNPNSGIR 360

Query: 361 TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 396
           TKEPQVLSFIYRN ESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP
Sbjct: 361 TKEPQVLSFIYRNPESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 416

[Close]

BLAST of Carg17435 vs. NCBI nr
Match: XP_023536870.1 (F-box protein At5g03970-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.6 bits (2043), Expect = 1.3e-225
Identity = 385/416 (92.55%), Postives = 389/416 (93.51%), Query Frame = 0


Query: 1   MPNAKNSPIAAASTSSSNRPSGR---------------------ALACDDILTEILLRLP 60
           MPNAKNSPIAAAST SSNRPSGR                     ALACDDILTEILLRLP
Sbjct: 1   MPNAKNSPIAAASTPSSNRPSGRGYNGRFSRFRGRKMVSDSIHSALACDDILTEILLRLP 60

Query: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY 120
           EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY
Sbjct: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY 120

Query: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ 180
           EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSV+KYRCLLPQ
Sbjct: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVSKYRCLLPQ 180

Query: 181 PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL 240
           PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL
Sbjct: 181 PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL 240

Query: 241 VCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSI 300
           VCSS FSLSPW VGTVID+VIYWFGTYRSLAIYDPGF ERSINSIKLPVGQLTYDYEDSI
Sbjct: 241 VCSSYFSLSPWMVGTVIDRVIYWFGTYRSLAIYDPGFGERSINSIKLPVGQLTYDYEDSI 300

Query: 301 LGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKQNPNSGIR 360
           LGESSDGLLQYGQSGKMGLEIWIL+KEQATVTDRYEYRWTLRHRLS KEMSKQNPNSGIR
Sbjct: 301 LGESSDGLLQYGQSGKMGLEIWILHKEQATVTDRYEYRWTLRHRLSCKEMSKQNPNSGIR 360

Query: 361 TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 396
           TKEPQVLSFI R+SESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP
Sbjct: 361 TKEPQVLSFICRDSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 416

[Close]

BLAST of Carg17435 vs. NCBI nr
Match: XP_022965749.1 (F-box protein At5g03970-like [Cucurbita maxima])

HSP 1 Score: 785.0 bits (2026), Expect = 1.2e-223
Identity = 381/416 (91.59%), Postives = 386/416 (92.79%), Query Frame = 0


Query: 1   MPNAKNSPIAAASTSSSNRPSGR---------------------ALACDDILTEILLRLP 60
           M NAKNSPIA ASTS+SNRPSGR                     ALACDDILTEILLRLP
Sbjct: 1   MANAKNSPIAPASTSASNRPSGRGYNGRFSRFRGRKMVSDSIHSALACDDILTEILLRLP 60

Query: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLRRPRY 120
           EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTH+RLFGFFVCNLLYIDRPQGGLRRPRY
Sbjct: 61  EKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHSRLFGFFVCNLLYIDRPQGGLRRPRY 120

Query: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ 180
           EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ
Sbjct: 121 EPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQ 180

Query: 181 PRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTL 240
           PRKHYKCLCIAFITEN  EAD DMVYRI+RASCECKVDVINTISIETFSS+TWTWKQSTL
Sbjct: 181 PRKHYKCLCIAFITENHREADRDMVYRIIRASCECKVDVINTISIETFSSLTWTWKQSTL 240

Query: 241 VCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDYEDSI 300
           VCSSDFSLSPWTVGTVID+VIYWFGTYRSLAIYDPGF ERSINSIKLPVGQLTYDYEDSI
Sbjct: 241 VCSSDFSLSPWTVGTVIDRVIYWFGTYRSLAIYDPGFGERSINSIKLPVGQLTYDYEDSI 300

Query: 301 LGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRLSSKEMSKQNPNSGIR 360
           LGESSDGLLQYGQSGKMGLEIWIL  EQA VTDRYEYRWTLRHRLSSKEMSKQNPNSGIR
Sbjct: 301 LGESSDGLLQYGQSGKMGLEIWILLMEQAMVTDRYEYRWTLRHRLSSKEMSKQNPNSGIR 360

Query: 361 TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 396
           TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP
Sbjct: 361 TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIPWDSCKVVP 416

[Close]

BLAST of Carg17435 vs. NCBI nr
Match: XP_022999083.1 (F-box protein At5g03970-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 639.4 bits (1648), Expect = 8.0e-180
Identity = 304/376 (80.85%), Postives = 332/376 (88.30%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           ALA DDIL EILLRLPEK+VFKFILVSK+WLYLIC+  FRRCYE QWG H+RLFGFFVCN
Sbjct: 48  ALASDDILLEILLRLPEKYVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSRLFGFFVCN 107

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LYIDRPQ G+RRPRYEPALPLLSTCKE DDLMSSG LRKLGYFIDYSDGL+LCGRHPK+
Sbjct: 108 FLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLLLCGRHPKH 167

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTIS 203
           YYVW+SVTKYR  LPQP+KHYK LC AF+TE+  E  GD+VYR+VRA+CEC+VDVINTIS
Sbjct: 168 YYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECRVDVINTIS 227

Query: 204 IETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINS 263
           IETFSS+TWTWKQSTLVCSS+F+LSPWTVGTVI  VI+WFGTYRSLAIYDPGF ER I S
Sbjct: 228 IETFSSLTWTWKQSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPGFGERCITS 287

Query: 264 IKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ----ATVTDRYEYRWT 323
           IKLPVGQLT+DYEDSILGESSD LLQYGQSGK GLE W+LYKEQ    +    R EYRW 
Sbjct: 288 IKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEQNNSLSPFDTRCEYRWK 347

Query: 324 LRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPY 383
           LR +LS KE+ KQNPNSGIR+KEPQ+LSFI RNS+SVFIRLGSNIY CNIRSKTL VIPY
Sbjct: 348 LRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRSKTLEVIPY 407

Query: 384 HCDGVSIPWDSCKVVP 396
           HCD +SIPWD CKVVP
Sbjct: 408 HCDALSIPWDFCKVVP 423

[Close]

BLAST of Carg17435 vs. NCBI nr
Match: XP_022999082.1 (F-box protein At5g03970-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 639.4 bits (1648), Expect = 8.0e-180
Identity = 304/376 (80.85%), Postives = 332/376 (88.30%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           ALA DDIL EILLRLPEK+VFKFILVSK+WLYLIC+  FRRCYE QWG H+RLFGFFVCN
Sbjct: 57  ALASDDILLEILLRLPEKYVFKFILVSKRWLYLICNFSFRRCYEKQWGAHSRLFGFFVCN 116

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LYIDRPQ G+RRPRYEPALPLLSTCKE DDLMSSG LRKLGYFIDYSDGL+LCGRHPK+
Sbjct: 117 FLYIDRPQDGVRRPRYEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLLLCGRHPKH 176

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTIS 203
           YYVW+SVTKYR  LPQP+KHYK LC AF+TE+  E  GD+VYR+VRA+CEC+VDVINTIS
Sbjct: 177 YYVWDSVTKYRRQLPQPQKHYKYLCTAFMTEDPSEGRGDIVYRVVRANCECRVDVINTIS 236

Query: 204 IETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINS 263
           IETFSS+TWTWKQSTLVCSS+F+LSPWTVGTVI  VI+WFGTYRSLAIYDPGF ER I S
Sbjct: 237 IETFSSLTWTWKQSTLVCSSEFALSPWTVGTVIKGVIHWFGTYRSLAIYDPGFGERCITS 296

Query: 264 IKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ----ATVTDRYEYRWT 323
           IKLPVGQLT+DYEDSILGESSD LLQYGQSGK GLE W+LYKEQ    +    R EYRW 
Sbjct: 297 IKLPVGQLTHDYEDSILGESSDRLLQYGQSGKHGLETWVLYKEQNNSLSPFDTRCEYRWK 356

Query: 324 LRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPY 383
           LR +LS KE+ KQNPNSGIR+KEPQ+LSFI RNS+SVFIRLGSNIY CNIRSKTL VIPY
Sbjct: 357 LRCKLSYKELWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYQCNIRSKTLEVIPY 416

Query: 384 HCDGVSIPWDSCKVVP 396
           HCD +SIPWD CKVVP
Sbjct: 417 HCDALSIPWDFCKVVP 432

[Close]

BLAST of Carg17435 vs. TAIR10
Match: AT5G03970.1 (F-box associated ubiquitination effector family protein)

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-82
Identity = 160/375 (42.67%), Postives = 224/375 (59.73%), Query Frame = 0


Query: 25  LACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNL 84
           L  +D + EIL+ LP + ++K ILVSK+WL +I    FR  Y  +W  +  L GFFVC+ 
Sbjct: 23  LNSNDTMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGFFVCSS 82

Query: 85  LYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNY 144
           +Y+ R   G RRPR EP+LPLLST   GD++ SSG L+KLGY+ID +DGL+LCGRHPK Y
Sbjct: 83  MYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGRHPKAY 142

Query: 145 YVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISI 204
           Y+W+  T+ +  LP+PR H++ LC++ I+E+    D    Y++VRA C         + +
Sbjct: 143 YLWDPSTQKQQQLPRPRVHFEELCMSLISED--SPDQGFSYKVVRAECVAFPVNSTKVKV 202

Query: 205 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSI 264
           ETFSS T TW  S L+C    SLSPWT G VI  V+YW      +AIYD    E+ I+ I
Sbjct: 203 ETFSSKTSTWSYSELICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEKRIDVI 262

Query: 265 KLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRL 324
           KLP    TYDY++ +LGE+ DG LQYG S K  +E+W L K    +       W L  ++
Sbjct: 263 KLP---KTYDYDEQVLGETDDGSLQYGWSNKSVMEVWKLEKVGNVL------EWNLLFKV 322

Query: 325 SSKEMSKQNPNSGIR----TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYH 384
           + K M K N     R    TKE Q+L+   + S+ V+IR  + I++ +  +K + V+ Y 
Sbjct: 323 NFKAMWKMNQAVATRFSTWTKETQLLALFNQKSDLVYIRCDTQIFIYHTETKRVEVVQYQ 382

Query: 385 CDGVSIPWDSCKVVP 396
               ++ WD  KVVP
Sbjct: 383 GRKSTLVWDFNKVVP 386

[Close]

BLAST of Carg17435 vs. TAIR10
Match: AT1G47790.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-08
Identity = 86/364 (23.63%), Postives = 144/364 (39.56%), Query Frame = 0


Query: 29  DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGT-HTRLFGFFVCNLLYI 88
           D+ +EILLRLP K V +F  VSK W  +I D  F + YE Q  T  + LF F   + L++
Sbjct: 28  DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSDKLFV 87

Query: 89  DRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGY--FIDYSDGLVLCGRHPKNYY 148
                 + +  Y+      S+ +   D       ++  Y    +   GL+ C        
Sbjct: 88  ----FSIPKHHYDSN----SSSQAAIDRFQVKLPQEFSYPSPTESVHGLI-CFHVLATVI 147

Query: 149 VWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASC-ECKVDVINTISI 208
           VWN   +    LP+PRK +K L + F+  +  E    +V      +C EC+V        
Sbjct: 148 VWNPSMRQFLTLPKPRKSWKELTV-FLGYDPIEGKHKVVCLPRNRTCDECQV-------- 207

Query: 209 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTY---RSLAIYDPGFRERSI 268
            T  S   +W+  T+        +  T G  I  V+Y+       R   I     +    
Sbjct: 208 LTLGSAQKSWR--TVKTKHKHRSTNDTWGRCIKGVVYYIAYVYHTRVWCIMSFHVKSEKF 267

Query: 269 NSIKLPVGQLTYDYEDSILGESS--DGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 328
           + IKLP+  +  D   +  G  +  D L         G+ +WIL   +            
Sbjct: 268 DMIKLPLENIYRDVMINYEGRLACVDKLYTLNND---GIRLWILEDAE------------ 327

Query: 329 LRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIR---LGSNIYLCNIRSKTLAV 381
            +H+ SSK+   +  ++ +RT     L+ +    E V+I    L S +  C+ +      
Sbjct: 328 -KHKWSSKQFLARYVHNDLRTNTISKLTGVTHAGEFVYISTQYLKSFVLFCDPKKNRFRK 355

[Close]

BLAST of Carg17435 vs. TAIR10
Match: AT5G07610.1 (F-box family protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.9e-06
Identity = 57/242 (23.55%), Postives = 90/242 (37.19%), Query Frame = 0


Query: 28  DDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYI 87
           DD+L +IL  LP K + +F  VSK+WL LI +  F     ++      + GFF+ +   I
Sbjct: 35  DDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSN-RVIKSNHPLPISGFFLHSPREI 94

Query: 88  DRPQGGL----RRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLC------ 147
                 L       R   +LPL  T  + D ++           +  ++GL+LC      
Sbjct: 95  KYSFVSLDDDATNQRISSSLPLWFTDHQTDMII-----------MQSTNGLLLCKCSCAS 154

Query: 148 -GRHPKNYYVWNSVTKYRCLL--------------PQPRKHYKCLCIAFITENRGEADGD 207
                 NYYV+N  TK   LL              P    HYK  C+   + N   +  D
Sbjct: 155 SNHFNTNYYVYNPTTKQYTLLHQIAGHIALSLAFDPSRSPHYKVFCLRGRSNNSFSSASD 214

Query: 208 MVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYW 245
                                IE +SS    W++   V +S  +   ++     +  + W
Sbjct: 215 S----------------ELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 248

[Close]

BLAST of Carg17435 vs. TAIR10
Match: AT1G50870.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-05
Identity = 29/66 (43.94%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 16 SSNRPSGRALACD-DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHT 75
          SS+ P    L C  D++ EILLRLP K V +F  VSK WL    D  F   YE +  T  
Sbjct: 20 SSSIPKTTTLLCPLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRP 79

Query: 76 RLFGFF 81
           L  FF
Sbjct: 80 SLLMFF 85

[Close]

BLAST of Carg17435 vs. TAIR10
Match: AT1G70970.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 48/194 (24.74%), Postives = 76/194 (39.18%), Query Frame = 0


Query: 21  SGRALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFF 80
           S   L  +D+ TEI+  LP K + +F++VSKKW  +I    F+  Y  +  T  RL  F 
Sbjct: 5   SSETLHVEDLQTEIMSWLPLKSLLRFVIVSKKWASIIRGEQFKALYLRRSMTRPRLM-FM 64

Query: 81  VCNLLYIDRPQGGLRRPRYEPALPLLSTCKEG---------DDLMSSGFLRKLGYF---- 140
           V  +  +         P     +   S CKE          + L  S +  K+ YF    
Sbjct: 65  VRRIATL---------PPEPEMVWFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSGQ 124

Query: 141 -------------IDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITE 189
                        +    G ++C +    + + N  TK    LP  + H K    AFIT 
Sbjct: 125 QQLRVPPNTNYTSVSQPIGGLICLQSETKFALCNPGTKKSRALPDIQAHEK----AFITS 184

[Close]

BLAST of Carg17435 vs. Swiss-Prot
Match: sp|Q94A64|FB251_ARATH (F-box protein At5g03970 OS=Arabidopsis thaliana OX=3702 GN=At5g03970 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.6e-81
Identity = 160/375 (42.67%), Postives = 224/375 (59.73%), Query Frame = 0


Query: 25  LACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNL 84
           L  +D + EIL+ LP + ++K ILVSK+WL +I    FR  Y  +W  +  L GFFVC+ 
Sbjct: 23  LNSNDTMCEILILLPPETIYKLILVSKRWLEIIASPCFRHTYLAKWKPNFELIGFFVCSS 82

Query: 85  LYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNY 144
           +Y+ R   G RRPR EP+LPLLST   GD++ SSG L+KLGY+ID +DGL+LCGRHPK Y
Sbjct: 83  MYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIESSGILKKLGYYIDSADGLLLCGRHPKAY 142

Query: 145 YVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISI 204
           Y+W+  T+ +  LP+PR H++ LC++ I+E+    D    Y++VRA C         + +
Sbjct: 143 YLWDPSTQKQQQLPRPRVHFEELCMSLISED--SPDQGFSYKVVRAECVAFPVNSTKVKV 202

Query: 205 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSI 264
           ETFSS T TW  S L+C    SLSPWT G VI  V+YW      +AIYD    E+ I+ I
Sbjct: 203 ETFSSKTSTWSYSELICLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDSNSEEKRIDVI 262

Query: 265 KLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWTLRHRL 324
           KLP    TYDY++ +LGE+ DG LQYG S K  +E+W L K    +       W L  ++
Sbjct: 263 KLP---KTYDYDEQVLGETDDGSLQYGWSNKSVMEVWKLEKVGNVL------EWNLLFKV 322

Query: 325 SSKEMSKQNPNSGIR----TKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYH 384
           + K M K N     R    TKE Q+L+   + S+ V+IR  + I++ +  +K + V+ Y 
Sbjct: 323 NFKAMWKMNQAVATRFSTWTKETQLLALFNQKSDLVYIRCDTQIFIYHTETKRVEVVQYQ 382

Query: 385 CDGVSIPWDSCKVVP 396
               ++ WD  KVVP
Sbjct: 383 GRKSTLVWDFNKVVP 386

[Close]

BLAST of Carg17435 vs. Swiss-Prot
Match: sp|Q9FZF8|FB44_ARATH (Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07
Identity = 86/364 (23.63%), Postives = 144/364 (39.56%), Query Frame = 0


Query: 29  DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGT-HTRLFGFFVCNLLYI 88
           D+ +EILLRLP K V +F  VSK W  +I D  F + YE Q  T  + LF F   + L++
Sbjct: 28  DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSDKLFV 87

Query: 89  DRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGY--FIDYSDGLVLCGRHPKNYY 148
                 + +  Y+      S+ +   D       ++  Y    +   GL+ C        
Sbjct: 88  ----FSIPKHHYDSN----SSSQAAIDRFQVKLPQEFSYPSPTESVHGLI-CFHVLATVI 147

Query: 149 VWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASC-ECKVDVINTISI 208
           VWN   +    LP+PRK +K L + F+  +  E    +V      +C EC+V        
Sbjct: 148 VWNPSMRQFLTLPKPRKSWKELTV-FLGYDPIEGKHKVVCLPRNRTCDECQV-------- 207

Query: 209 ETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTY---RSLAIYDPGFRERSI 268
            T  S   +W+  T+        +  T G  I  V+Y+       R   I     +    
Sbjct: 208 LTLGSAQKSWR--TVKTKHKHRSTNDTWGRCIKGVVYYIAYVYHTRVWCIMSFHVKSEKF 267

Query: 269 NSIKLPVGQLTYDYEDSILGESS--DGLLQYGQSGKMGLEIWILYKEQATVTDRYEYRWT 328
           + IKLP+  +  D   +  G  +  D L         G+ +WIL   +            
Sbjct: 268 DMIKLPLENIYRDVMINYEGRLACVDKLYTLNND---GIRLWILEDAE------------ 327

Query: 329 LRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIR---LGSNIYLCNIRSKTLAV 381
            +H+ SSK+   +  ++ +RT     L+ +    E V+I    L S +  C+ +      
Sbjct: 328 -KHKWSSKQFLARYVHNDLRTNTISKLTGVTHAGEFVYISTQYLKSFVLFCDPKKNRFRK 355

[Close]

BLAST of Carg17435 vs. Swiss-Prot
Match: sp|Q9FLS0|FB253_ARATH (F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.8e-05
Identity = 57/242 (23.55%), Postives = 90/242 (37.19%), Query Frame = 0


Query: 28  DDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYI 87
           DD+L +IL  LP K + +F  VSK+WL LI +  F     ++      + GFF+ +   I
Sbjct: 35  DDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSN-RVIKSNHPLPISGFFLHSPREI 94

Query: 88  DRPQGGL----RRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLC------ 147
                 L       R   +LPL  T  + D ++           +  ++GL+LC      
Sbjct: 95  KYSFVSLDDDATNQRISSSLPLWFTDHQTDMII-----------MQSTNGLLLCKCSCAS 154

Query: 148 -GRHPKNYYVWNSVTKYRCLL--------------PQPRKHYKCLCIAFITENRGEADGD 207
                 NYYV+N  TK   LL              P    HYK  C+   + N   +  D
Sbjct: 155 SNHFNTNYYVYNPTTKQYTLLHQIAGHIALSLAFDPSRSPHYKVFCLRGRSNNSFSSASD 214

Query: 208 MVYRIVRASCECKVDVINTISIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYW 245
                                IE +SS    W++   V +S  +   ++     +  + W
Sbjct: 215 S----------------ELYHIEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 248

[Close]

BLAST of Carg17435 vs. Swiss-Prot
Match: sp|Q9C6J3|FB52_ARATH (Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.7e-04
Identity = 29/66 (43.94%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 16 SSNRPSGRALACD-DILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHT 75
          SS+ P    L C  D++ EILLRLP K V +F  VSK WL    D  F   YE +  T  
Sbjct: 20 SSSIPKTTTLLCPLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRP 79

Query: 76 RLFGFF 81
           L  FF
Sbjct: 80 SLLMFF 85

[Close]

BLAST of Carg17435 vs. Swiss-Prot
Match: sp|Q9SSK2|FB86_ARATH (Putative F-box protein At1g70970 OS=Arabidopsis thaliana OX=3702 GN=At1g70970 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-04
Identity = 48/194 (24.74%), Postives = 76/194 (39.18%), Query Frame = 0


Query: 21  SGRALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFF 80
           S   L  +D+ TEI+  LP K + +F++VSKKW  +I    F+  Y  +  T  RL  F 
Sbjct: 5   SSETLHVEDLQTEIMSWLPLKSLLRFVIVSKKWASIIRGEQFKALYLRRSMTRPRLM-FM 64

Query: 81  VCNLLYIDRPQGGLRRPRYEPALPLLSTCKEG---------DDLMSSGFLRKLGYF---- 140
           V  +  +         P     +   S CKE          + L  S +  K+ YF    
Sbjct: 65  VRRIATL---------PPEPEMVWFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSGQ 124

Query: 141 -------------IDYSDGLVLCGRHPKNYYVWNSVTKYRCLLPQPRKHYKCLCIAFITE 189
                        +    G ++C +    + + N  TK    LP  + H K    AFIT 
Sbjct: 125 QQLRVPPNTNYTSVSQPIGGLICLQSETKFALCNPGTKKSRALPDIQAHEK----AFITS 184

[Close]

BLAST of Carg17435 vs. TrEMBL
Match: tr|A0A1S3C2Y8|A0A1S3C2Y8_CUCME (F-box protein At5g03970 OS=Cucumis melo OX=3656 GN=LOC103496301 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 6.7e-175
Identity = 308/428 (71.96%), Postives = 342/428 (79.91%), Query Frame = 0


Query: 1   MPNAKNSPIAAASTSSSNRPSGR-------------------------ALACDDILTEIL 60
           M NAKNSP  AAS S+SNRPSG                          ALACDDILTEIL
Sbjct: 1   MDNAKNSP-RAASASASNRPSGNTGSSHSLESFPSHRGKRMVSDSIHSALACDDILTEIL 60

Query: 61  LRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCNLLYIDRPQGGLR 120
           LRLPEK +FK ILVSK+WL LIC+  FRR YE QWG HTRLFGFFVCN LYIDRPQ G+R
Sbjct: 61  LRLPEKSIFKLILVSKRWLSLICNFSFRRSYEKQWGAHTRLFGFFVCNFLYIDRPQDGVR 120

Query: 121 RPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKNYYVWNSVTKYRC 180
           RPR EPALPLLSTC+E DDL+SSG LRKLGYFIDYSDGL+LCGRHPK+YY+W+SVTKYR 
Sbjct: 121 RPRSEPALPLLSTCQESDDLVSSGILRKLGYFIDYSDGLLLCGRHPKHYYIWDSVTKYRR 180

Query: 181 LLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTISIETFSSMTWTWK 240
            LPQP+KHYK LC AFITE+ G   GD+VYR+VRA+CEC+VDVINTISIETFSS TWTWK
Sbjct: 181 QLPQPQKHYKYLCTAFITEDPGPDCGDIVYRVVRANCECRVDVINTISIETFSSRTWTWK 240

Query: 241 QSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINSIKLPVGQLTYDY 300
           QSTLVCSSDF+LSPWTVGTVI +VIYWFGTYRSLAIYDPGF ER I SIKLP G+LT DY
Sbjct: 241 QSTLVCSSDFALSPWTVGTVIKEVIYWFGTYRSLAIYDPGFGERRITSIKLPTGKLTQDY 300

Query: 301 EDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRY--------EYRWTLRHRLSSK 360
           EDSILG SSDGLLQYGQSGK+GLE W+L+KEQ   +  Y        EYRW LRH+LS K
Sbjct: 301 EDSILGVSSDGLLQYGQSGKLGLETWVLFKEQDDSSSSYTIEFDTHCEYRWMLRHKLSYK 360

Query: 361 EMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVIPYHCDGVSIP 396
           ++ KQNPNSG+R+KE Q+LSFI RNS+SVFIRLG++IY CNIRSK+L V PYH    SIP
Sbjct: 361 DLWKQNPNSGLRSKETQILSFIRRNSDSVFIRLGTSIYQCNIRSKSLEVTPYHHGDFSIP 420

[Close]

BLAST of Carg17435 vs. TrEMBL
Match: tr|A0A0A0LJ78|A0A0A0LJ78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010130 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 2.2e-170
Identity = 290/380 (76.32%), Postives = 321/380 (84.47%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           ALACDDILTEILLRLPEK +FK ILVSK+WL LIC+  F R YE QWG HTRLFGFFVCN
Sbjct: 63  ALACDDILTEILLRLPEKSIFKLILVSKRWLSLICNFSFHRSYEKQWGAHTRLFGFFVCN 122

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LYIDRPQ G+RRPR EPALPLLSTC+E DDL+SSG LRKLGYFIDYSDGL+LCGRHPK+
Sbjct: 123 FLYIDRPQDGVRRPRSEPALPLLSTCQESDDLVSSGILRKLGYFIDYSDGLLLCGRHPKH 182

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTIS 203
           YYVW+SVTKYR  LPQP+KHYK LC AFITE+ G   GD+VYR+VRA+CEC+VDVINTIS
Sbjct: 183 YYVWDSVTKYRRQLPQPQKHYKYLCTAFITEDPGLDCGDIVYRVVRANCECRVDVINTIS 242

Query: 204 IETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINS 263
           IETFSS TWTWKQSTLVCSSDF+LSPWTVGTVI  VI+WFGTYRSLAIYDPGF ER I S
Sbjct: 243 IETFSSRTWTWKQSTLVCSSDFALSPWTVGTVIKGVIHWFGTYRSLAIYDPGFGERRITS 302

Query: 264 IKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQ--------ATVTDRYE 323
           IKLP G+LT DYEDSILG SSDGLLQYGQSGK+GLE W+LYKE           +   YE
Sbjct: 303 IKLPTGKLTQDYEDSILGVSSDGLLQYGQSGKLGLETWVLYKEHDDSSSSYTMELDTHYE 362

Query: 324 YRWTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLA 383
           YRW LRH+LS K++ KQNPNSG+R+KE Q+LSFI RNS+SVFIRLG++IY CNI+SKTL 
Sbjct: 363 YRWMLRHKLSYKDLWKQNPNSGLRSKETQILSFIRRNSDSVFIRLGTSIYQCNIKSKTLE 422

Query: 384 VIPYHCDGVSIPWDSCKVVP 396
           V PYH    SIPWD CKVVP
Sbjct: 423 VTPYHHGDFSIPWDFCKVVP 442

[Close]

BLAST of Carg17435 vs. TrEMBL
Match: tr|A0A2I4FM66|A0A2I4FM66_9ROSI (F-box protein At5g03970 OS=Juglans regia OX=51240 GN=LOC109000367 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.3e-125
Identity = 219/378 (57.94%), Postives = 274/378 (72.49%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           AL CDD+L EILLRLPEK VF+ ILVS+KWL++IC   FR  Y  QW     L GFFVCN
Sbjct: 14  ALTCDDVLCEILLRLPEKSVFRLILVSRKWLHVICSNSFRSSYHSQWRESFHLLGFFVCN 73

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LY+ RP+ G RRP +EPALPLLSTCKEGDDL  SG L++LGYFID S+G +LCGRHP  
Sbjct: 74  FLYLGRPRDGFRRPPWEPALPLLSTCKEGDDLKFSGVLKQLGYFIDSSNGFLLCGRHPMT 133

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTIS 203
           YY+W+ +T+ +  LPQP+++Y+ LC+AFI E+    D  + Y+++RA C CK   +N +S
Sbjct: 134 YYIWSPITRKQYQLPQPQQYYRSLCMAFIVED--SHDDVICYKVIRAKCVCKPVEVNNVS 193

Query: 204 IETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINS 263
           IETFSS T  WKQSTL CSS F+L P +V TVI  V+YWF   + LAIYDP    R ++ 
Sbjct: 194 IETFSSKTGAWKQSTLTCSSSFALCPRSVATVIGGVVYWFAVQKHLAIYDPYLGVRRLSL 253

Query: 264 IKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRY------EYR 323
           IKLP G+L++DYE+S+LGES+DGLLQYGQS K+G+EIW+L KEQ+  +  Y      E R
Sbjct: 254 IKLPAGELSFDYEESVLGESTDGLLQYGQSSKLGIEIWVLEKEQSGYSSMYKSDTHWEKR 313

Query: 324 WTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVI 383
           W LR++L+ +EM KQNP    R  E Q+LSF+ RNSESVFIR GSNI+LC + SK L V+
Sbjct: 314 WNLRYKLNFREMWKQNPTFTDRFSESQILSFLPRNSESVFIRSGSNIFLCQLESKRLDVV 373

Query: 384 PYHCDGVSIPWDSCKVVP 396
            YH  G SI WDS KVVP
Sbjct: 374 RYHGRGSSISWDSSKVVP 389

[Close]

BLAST of Carg17435 vs. TrEMBL
Match: tr|A0A2N9FCV4|A0A2N9FCV4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12935 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.1e-124
Identity = 224/378 (59.26%), Postives = 279/378 (73.81%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           ALA DDIL+EILLRLPE +VF+ ILVSKKWL+LIC  PFR  Y  QW     L GFFVCN
Sbjct: 14  ALAIDDILSEILLRLPENYVFRLILVSKKWLHLICSNPFRSSYHSQWREKFHLLGFFVCN 73

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LY+ RP+ G+RRP +EPAL LLSTCKEGDDL  SG L++LG+FID S+GL+LCGR P  
Sbjct: 74  FLYLGRPRDGIRRPTWEPALTLLSTCKEGDDLKFSGILKRLGFFIDSSNGLLLCGRQPMT 133

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMV-YRIVRASCECKVDVINTI 203
           YYVWN +TK R  LPQP++ Y+ LC+AFI E   ++D D++ Y+++RA C CK   +NT+
Sbjct: 134 YYVWNPITKQRYELPQPQQFYRSLCMAFIVE---DSDDDVICYKVIRAKCVCKRVEVNTV 193

Query: 204 SIETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSIN 263
           SIETFSS T  WKQSTL CSS+F+L P +V TVI  V++WF   ++LAIYDP    R I+
Sbjct: 194 SIETFSSKTTAWKQSTLTCSSNFALCPRSVATVIKGVVHWFAVQKNLAIYDPYLGLRRIS 253

Query: 264 SIKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRY-----EYR 323
            IKLP GQL+YDYE+S+LGES DGLLQYGQS ++G+EIW+L KEQ++ +  Y     E R
Sbjct: 254 LIKLPAGQLSYDYEESVLGESFDGLLQYGQSSRLGIEIWVLEKEQSSNSSIYKSTHLENR 313

Query: 324 WTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVI 383
           W LR++L  KEM KQNP     +KE Q+LSF++RNSESVFIR GSNIYL +  S+ L V+
Sbjct: 314 WNLRYKLRFKEMWKQNPTFTGHSKETQILSFLHRNSESVFIRSGSNIYLYDFESRRLEVV 373

Query: 384 PYHCDGVSIPWDSCKVVP 396
            Y     SI WDS +VVP
Sbjct: 374 RYQGRASSIFWDSSRVVP 388

[Close]

BLAST of Carg17435 vs. TrEMBL
Match: tr|A0A0R0ESK5|A0A0R0ESK5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100810374 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114
Identity = 206/378 (54.50%), Postives = 266/378 (70.37%), Query Frame = 0


Query: 24  ALACDDILTEILLRLPEKHVFKFILVSKKWLYLICDLPFRRCYEMQWGTHTRLFGFFVCN 83
           AL CDDIL EILLR+P   + K I+VSK WL +IC   FR+CY  QWG   RL GFFVCN
Sbjct: 34  ALNCDDILHEILLRIPPPTISKLIIVSKIWLRVICSPSFRQCYLRQWGQSFRLLGFFVCN 93

Query: 84  LLYIDRPQGGLRRPRYEPALPLLSTCKEGDDLMSSGFLRKLGYFIDYSDGLVLCGRHPKN 143
            LY+ RP+ G RRPR+EPALP+LSTCK+GDDL  SG L+ LGYFID S G++L G HPK 
Sbjct: 94  FLYLGRPRDGYRRPRWEPALPILSTCKDGDDLKLSGILKHLGYFIDSSKGIILSGFHPKT 153

Query: 144 YYVWNSVTKYRCLLPQPRKHYKCLCIAFITENRGEADGDMVYRIVRASCECKVDVINTIS 203
           YYV+N+VTK +  LP+P++ YK LC+A I E     D D+ Y+++RA CECK+   NT+S
Sbjct: 154 YYVYNTVTKQKYELPEPQQFYKVLCMALIVEE--YLDSDICYKVIRARCECKLKERNTVS 213

Query: 204 IETFSSMTWTWKQSTLVCSSDFSLSPWTVGTVIDQVIYWFGTYRSLAIYDPGFRERSINS 263
           IET+SS T  WKQSTL+CS+ F+L P T   V+  V++WF  +  LAIYDP   +R I  
Sbjct: 214 IETYSSKTRQWKQSTLMCSTTFALCPRTAAMVVGGVVHWFAMWGKLAIYDPRLGDRYIAL 273

Query: 264 IKLPVGQLTYDYEDSILGESSDGLLQYGQSGKMGLEIWILYKEQATVTDRY------EYR 323
           IKLP G LT+++E+S+LGESSDGLLQYGQS  +GLEIWIL KE    +  Y      +Y+
Sbjct: 274 IKLPTGVLTHEHEESVLGESSDGLLQYGQSNNLGLEIWILEKESGANSSIYCNCTHLKYK 333

Query: 324 WTLRHRLSSKEMSKQNPNSGIRTKEPQVLSFIYRNSESVFIRLGSNIYLCNIRSKTLAVI 383
           W LR RL+ K + KQ P+    +KE Q+LSF+ +NS S+FIR G NI LC++ +KT+ ++
Sbjct: 334 WILRWRLNFKVLWKQMPSLSTHSKETQILSFLPQNSTSIFIRSGWNILLCDLETKTVEIV 393

Query: 384 PYHCDGVSIPWDSCKVVP 396
            Y   G +I W+S KVVP
Sbjct: 394 NYQGRGGTISWESSKVVP 409

The following BLAST results are available for this feature:

BLAST of Carg17435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937924.1	2.6e-231	94.47	F-box protein At5g03970-like [Cucurbita moschata]	[more]
XP_023536870.1	1.3e-225	92.55	F-box protein At5g03970-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965749.1	1.2e-223	91.59	F-box protein At5g03970-like [Cucurbita maxima]	[more]
XP_022999083.1	8.0e-180	80.85	F-box protein At5g03970-like isoform X2 [Cucurbita maxima]	[more]
XP_022999082.1	8.0e-180	80.85	F-box protein At5g03970-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg17435 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03970.1	1.4e-82	42.67	F-box associated ubiquitination effector family protein	[more]
AT1G47790.1	3.1e-08	23.63	F-box and associated interaction domains-containing protein	[more]
AT5G07610.1	4.9e-06	23.55	F-box family protein	[more]
AT1G50870.1	3.2e-05	43.94	F-box and associated interaction domains-containing protein	[more]
AT1G70970.1	4.1e-05	24.74	F-box and associated interaction domains-containing protein	[more]

BLAST of Carg17435 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94A64\|FB251_ARATH	2.6e-81	42.67	F-box protein At5g03970 OS=Arabidopsis thaliana OX=3702 GN=At5g03970 PE=2 SV=1	[more]
sp\|Q9FZF8\|FB44_ARATH	5.5e-07	23.63	Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE...	[more]
sp\|Q9FLS0\|FB253_ARATH	8.8e-05	23.55	F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1	[more]
sp\|Q9C6J3\|FB52_ARATH	5.7e-04	43.94	Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE...	[more]
sp\|Q9SSK2\|FB86_ARATH	7.5e-04	24.74	Putative F-box protein At1g70970 OS=Arabidopsis thaliana OX=3702 GN=At1g70970 PE...	[more]

BLAST of Carg17435 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2Y8\|A0A1S3C2Y8_CUCME	6.7e-175	71.96	F-box protein At5g03970 OS=Cucumis melo OX=3656 GN=LOC103496301 PE=4 SV=1	[more]
tr\|A0A0A0LJ78\|A0A0A0LJ78_CUCSA	2.2e-170	76.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010130 PE=4 SV=1	[more]
tr\|A0A2I4FM66\|A0A2I4FM66_9ROSI	6.3e-125	57.94	F-box protein At5g03970 OS=Juglans regia OX=51240 GN=LOC109000367 PE=4 SV=1	[more]
tr\|A0A2N9FCV4\|A0A2N9FCV4_FAGSY	3.1e-124	59.26	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12935 PE=4 SV=1	[more]
tr\|A0A0R0ESK5\|A0A0R0ESK5_SOYBN	1.0e-114	54.50	Uncharacterized protein OS=Glycine max OX=3847 GN=100810374 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17435-RA	Carg17435-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 28..63 e-value: 1.5E-5 score: 24.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31672	FAMILY NOT NAMED	coord: 20..395
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 28..79

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17435	Cla013629	Watermelon (97103) v1	carwmB0242
Carg17435	Csa2G010130	Cucumber (Chinese Long) v2	carcuB0282
Carg17435	MELO3C004412	Melon (DHL92) v3.5.1	carmeB0258
Carg17435	ClCG02G016930	Watermelon (Charleston Gray)	carwcgB0245
Carg17435	CSPI02G02670	Wild cucumber (PI 183967)	carcpiB0286
Carg17435	Cucsa.133010	Cucumber (Gy14) v1	carcgyB0300
Carg17435	CmaCh05G012260	Cucurbita maxima (Rimu)	carcmaB0356
Carg17435	CmaCh12G011420	Cucurbita maxima (Rimu)	carcmaB0355
Carg17435	CmoCh12G011630	Cucurbita moschata (Rifu)	carcmoB0356
Carg17435	Cp4.1LG07g09720	Cucurbita pepo (Zucchini)	carcpeB0361
Carg17435	Cp4.1LG11g10070	Cucurbita pepo (Zucchini)	carcpeB0357
Carg17435	MELO3C004412.2	Melon (DHL92) v3.6.1	carmedB0268
Carg17435	CsaV3_2G003840	Cucumber (Chinese Long) v3	carcucB0286

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17435	Carg23001	Silver-seed gourd	carcarB297

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17435	Cucumber (Gy14) v2	carcgybB0269
Carg17435	Cucurbita moschata (Rifu)	carcmoB0357
Carg17435	Bottle gourd (USVL1VR-Ls)	carlsiB226
Carg17435	Watermelon (97103) v2	carwmbB0259