Carg17420 (gene) Silver-seed gourd

Overview
NameCarg17420
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionlate embryogenesis abundant protein D-34
LocationCucurbita_argyrosperma_scaffold_092 : 535913 .. 536698 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCGGGAACAGCCACGTAGGGGTGAGGAACAGAGGCAGCCTCGCCGGAACGACGTCGACGAGGGGCAGGAAACCATCAAATACGGCGACGTTTTCAACGTCTCCGGCGACCTGGCTGCGAACCCCATCGCACCACAGGATGCTCGCATGATGGGCAGTGCCGAAACCAGGGTATTGGGGCAAGTGCCGCCGGCTGGTCCGGCCGATATCATGCGAGCCGCCGCTGCTTATAATGTCCGGGTCGGTCTTCTTGGTACCCGTGACGTTAGCTATGCTGCTAAAAACGAAGGCATCAACATTAGCGAGACCGATATTCCCGGAGCCCGTGTCGTAACCGAACGCGTCGCCGGACAGGTTCCCATCTTGAATTTCTCAGATCAATTTATCTCTTTCTTTACCTTTTGTTAAAATTACCAGTTGGGTTCCTTCATTTTTAGATTAAAACTTATTTTTACGTTCAAAAAAGTAATTCATTTGTTGGTGGGTGCTTGATTTTTGAAGGTCGTCGGCCAGTATTTGGACACCACGACGGCGATTGAAACAGAGACAACGGAGCAGAATGTAATAACGATCGGAGAAGCACTAGAAGCGGCGGGTCAAACTGCCGGAAACAAGCCGGTGGAACAGAGTGACGCTGCAGCAATTCAAGCCGCAGAGGGCAGAGCAACCGGCAGCAATGCCATATCTCCCGGTGGGCTCACAGCCACAGCTCAACAATCCAAACTTGATCACTCACCCAGGTGGGGTGGCGGCCTCCATCACCGCCGCCGCGAGGCTGAATGA

mRNA sequence

ATGAGTCGGGAACAGCCACGTAGGGGTGAGGAACAGAGGCAGCCTCGCCGGAACGACGTCGACGAGGGGCAGGAAACCATCAAATACGGCGACGTTTTCAACGTCTCCGGCGACCTGGCTGCGAACCCCATCGCACCACAGGATGCTCGCATGATGGGCAGTGCCGAAACCAGGGTATTGGGGCAAGTGCCGCCGGCTGGTCCGGCCGATATCATGCGAGCCGCCGCTGCTTATAATGTCCGGGTCGGTCTTCTTGGTACCCGTGACGTTAGCTATGCTGCTAAAAACGAAGGCATCAACATTAGCGAGACCGATATTCCCGGAGCCCGTGTCGTAACCGAACGCGTCGCCGGACAGGTCGTCGGCCAGTATTTGGACACCACGACGGCGATTGAAACAGAGACAACGGAGCAGAATGTAATAACGATCGGAGAAGCACTAGAAGCGGCGGGTCAAACTGCCGGAAACAAGCCGGTGGAACAGAGTGACGCTGCAGCAATTCAAGCCGCAGAGGGCAGAGCAACCGGCAGCAATGCCATATCTCCCGGTGGGCTCACAGCCACAGCTCAACAATCCAAACTTGATCACTCACCCAGGTGGGGTGGCGGCCTCCATCACCGCCGCCGCGAGGCTGAATGA

Coding sequence (CDS)

ATGAGTCGGGAACAGCCACGTAGGGGTGAGGAACAGAGGCAGCCTCGCCGGAACGACGTCGACGAGGGGCAGGAAACCATCAAATACGGCGACGTTTTCAACGTCTCCGGCGACCTGGCTGCGAACCCCATCGCACCACAGGATGCTCGCATGATGGGCAGTGCCGAAACCAGGGTATTGGGGCAAGTGCCGCCGGCTGGTCCGGCCGATATCATGCGAGCCGCCGCTGCTTATAATGTCCGGGTCGGTCTTCTTGGTACCCGTGACGTTAGCTATGCTGCTAAAAACGAAGGCATCAACATTAGCGAGACCGATATTCCCGGAGCCCGTGTCGTAACCGAACGCGTCGCCGGACAGGTCGTCGGCCAGTATTTGGACACCACGACGGCGATTGAAACAGAGACAACGGAGCAGAATGTAATAACGATCGGAGAAGCACTAGAAGCGGCGGGTCAAACTGCCGGAAACAAGCCGGTGGAACAGAGTGACGCTGCAGCAATTCAAGCCGCAGAGGGCAGAGCAACCGGCAGCAATGCCATATCTCCCGGTGGGCTCACAGCCACAGCTCAACAATCCAAACTTGATCACTCACCCAGGTGGGGTGGCGGCCTCCATCACCGCCGCCGCGAGGCTGAATGA

Protein sequence

MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVLGQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQVVGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISPGGLTATAQQSKLDHSPRWGGGLHHRRREAE
Homology
[Close]
BLAST of Carg17420 vs. NCBI nr
Match: XP_023539062.1 (late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL
Sbjct: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQVPPAGPADIMRAAAAYNVRVGLLG RDVSYAAKNEGINISETDIPGARVVTERVAGQV
Sbjct: 61  GQVPPAGPADIMRAAAAYNVRVGLLGNRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI
Sbjct: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180

Query: 181 SPGGLTATAQQS 193
           SPGGLTATAQ +
Sbjct: 181 SPGGLTATAQSA 192

[Close]
BLAST of Carg17420 vs. NCBI nr
Match: XP_022973774.1 (late embryogenesis abundant protein D-34-like [Cucurbita maxima])

HSP 1 Score: 347.4 bits (890), Expect = 3.3e-92
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS EQPRRGEEQRQPRRNDVDEG+ETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL
Sbjct: 79  MSWEQPRRGEEQRQPRRNDVDEGEETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 138

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQVPPAGPADIMRAAAAYNVRVGLLG RDVSYAAKNEGINISETDIPGARVVTERVAGQV
Sbjct: 139 GQVPPAGPADIMRAAAAYNVRVGLLGDRDVSYAAKNEGINISETDIPGARVVTERVAGQV 198

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI
Sbjct: 199 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 258

Query: 181 SPGGLTATAQQS 193
           SPGGLTATAQ +
Sbjct: 259 SPGGLTATAQSA 270

[Close]
BLAST of Carg17420 vs. NCBI nr
Match: XP_022949409.1 (late embryogenesis abundant protein D-34-like [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL
Sbjct: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV
Sbjct: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTTTAIETETTEQNVITIGEALEAA QTAGNKPVEQSDAAAIQAAE RA GSNAI
Sbjct: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAAQTAGNKPVEQSDAAAIQAAEARAIGSNAI 180

Query: 181 SPGGLTATAQQS 193
           SPGGLTATAQ +
Sbjct: 181 SPGGLTATAQSA 192

[Close]
BLAST of Carg17420 vs. NCBI nr
Match: XP_022974461.1 (late embryogenesis abundant protein D-34-like [Cucurbita maxima])

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS EQPRRGEEQRQPRRNDVDEG+ETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL
Sbjct: 1   MSWEQPRRGEEQRQPRRNDVDEGKETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQVPPAGPADIMRAAAAYNV+VGLLG RDVSYAAKNEGINISETDIPGARVVTERVAGQV
Sbjct: 61  GQVPPAGPADIMRAAAAYNVQVGLLGDRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI
Sbjct: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180

Query: 181 SPGGLTATAQQS 193
           SPGGLTATAQ +
Sbjct: 181 SPGGLTATAQSA 192

[Close]
BLAST of Carg17420 vs. NCBI nr
Match: XP_011650977.1 (PREDICTED: late embryogenesis abundant protein D-34 isoform X1 [Cucumis sativus] >KGN56981.1 hypothetical protein Csa_3G146660 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 146/194 (75.26%), Postives = 164/194 (84.54%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+EQPRR E+ +Q RRND DE  ETIKYGD+FNVSGDLAANPIAP+DARMM SAETRVL
Sbjct: 1   MSQEQPRRDEQLQQSRRND-DEQLETIKYGDIFNVSGDLAANPIAPEDARMMASAETRVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQ+   GPAD+MRAAAA NVRVGLL +RD+S  AK++GINISETD+PGARVVTE VAGQV
Sbjct: 61  GQMHETGPADVMRAAAARNVRVGLLSSRDISDVAKSQGINISETDVPGARVVTECVAGQV 120

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTT     E  EQ+VITIG+ALEAA Q  GNKPVEQSDAAAIQAAE  ATG+NAI
Sbjct: 121 VGQYLDTTMTSGVEMPEQDVITIGQALEAACQMIGNKPVEQSDAAAIQAAEVCATGNNAI 180

Query: 181 SPGGLTATAQQSKL 195
           +PGGL ATAQ + +
Sbjct: 181 NPGGLGATAQAAAI 193

[Close]
BLAST of Carg17420 vs. TAIR10
Match: AT3G22490.1 (Seed maturation protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 101/190 (53.16%), Postives = 129/190 (67.89%), Query Frame = 0 

Query: 11  EQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVLGQVPPAGPAD 70
           ++ QP+R      QE + YGDVF VSG+LA  PIAP+DA MM +AETRV G     G A 
Sbjct: 3   QEEQPKR-----PQEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAA 62

Query: 71  IMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQVVGQYLD---- 130
           +M++AA  N R G +   D +  A   G+ +++TD+PGARV TE V GQVVGQY++    
Sbjct: 63  VMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPV 122

Query: 131 -TTTAIETET---TEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISP 190
            T  A+E E    + Q+ ITIGEALEA  QTAGNKPV+QSDAAAIQAAE RA G+N I+P
Sbjct: 123 ATAAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAP 182

Query: 191 GGLTATAQQS 193
           GG+ A+AQ +
Sbjct: 183 GGIAASAQSA 187

[Close]
BLAST of Carg17420 vs. TAIR10
Match: AT3G22500.1 (Seed maturation protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 100/201 (49.75%), Postives = 128/201 (63.68%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+EQPRR      PR        E +KYGDVF VSG+LA  PIAP+DA+MM SAET V 
Sbjct: 1   MSQEQPRR------PR--------EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVF 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           G     GPA +M++AA  N+R G +   D +      G  + +T +P A V TE V GQV
Sbjct: 61  GHTQKGGPAAVMQSAATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQV 120

Query: 121 VGQYLDTTTAIETETTE----QNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATG 180
           VGQ+++    +    T+    Q+ ITIGEALEA  +TAGNKPV+QSDAAAIQAAE RA+G
Sbjct: 121 VGQHVEPRRVVAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASG 180

Query: 181 SNAISPGGLTATAQQSKLDHS 198
           +N I+  G+ A+A QS  DH+
Sbjct: 181 TNVIALAGVAASA-QSAADHN 185

[Close]
BLAST of Carg17420 vs. TAIR10
Match: AT5G27980.1 (Seed maturation protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 48/95 (50.53%), Postives = 57/95 (60.00%), Query Frame = 0 

Query: 98  GINISETDIPGARVVTERVAGQVVGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNK 157
           GI  +E    G  VV E    Q  G+ ++    +      +  ITIGEALEAA  TAGNK
Sbjct: 28  GIKAAEDKEKG--VVAEASGEQAEGE-VNQKKVVANPLKSEGTITIGEALEAAVLTAGNK 87

Query: 158 PVEQSDAAAIQAAEGRATGSNAISPGGLTATAQQS 193
           PVE SDAAAIQAAE RATG   I PGG+ A+AQ +
Sbjct: 88  PVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSA 119

[Close]
BLAST of Carg17420 vs. TAIR10
Match: AT1G03120.1 (responsive to abscisic acid 28)

HSP 1 Score: 55.5 bits (132), Expect = 4.8e-08
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 139 NVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISPGGLTATAQ 191
           + +TIGEALEA   + G+KPV++ DAAAIQAAE RATG +   PGGL   AQ
Sbjct: 56  DTVTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQ 107

[Close]
BLAST of Carg17420 vs. TAIR10
Match: AT5G53260.1 (Seed maturation protein)

HSP 1 Score: 45.8 bits (107), Expect = 3.8e-05
Identity = 32/75 (42.67%), Postives = 43/75 (57.33%), Query Frame = 0 

Query: 118 GQVVGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGS 177
           GQ VG   + +TA E        +T  EAL+AA    G+KPVE +D AAI+  E RA G 
Sbjct: 28  GQFVGPTEEISTAAEALIGRSTTLT--EALKAASMNVGHKPVETTDVAAIKEVETRAIGG 87

Query: 178 NAISPGGLTATAQQS 193
           +  S GG+TA A ++
Sbjct: 88  DIESEGGVTAVASKA 100

[Close]
BLAST of Carg17420 vs. Swiss-Prot
Match: sp|P09444|LEA34_GOSHI (Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.7e-47
Identity = 112/194 (57.73%), Postives = 140/194 (72.16%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+ QPRR    +QP      E QE IKYGDVFNVSG+LA  PIAPQDA MM +AET+VL
Sbjct: 1   MSQGQPRR---PQQPAGQ--GENQEPIKYGDVFNVSGELANKPIAPQDAAMMQTAETQVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQ    G A +M+AAA  N +VG++G  D++  A  +G+ ++ETD+ G R++TE VAGQV
Sbjct: 61  GQTQKGGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVAGRRIITEAVAGQV 120

Query: 121 VGQYLDTTTAIETE--TTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSN 180
           VGQY+  T  + ++     QN ITIGEALEA  +TAG+KPV+QSDAAA+QAAE RATGSN
Sbjct: 121 VGQYVQATPVMTSQVGVVLQNAITIGEALEATAKTAGDKPVDQSDAAAVQAAEVRATGSN 180

Query: 181 AISPGGLTATAQQS 193
            I PGGL ATAQ +
Sbjct: 181 VIIPGGLAATAQSA 189

[Close]
BLAST of Carg17420 vs. Swiss-Prot
Match: sp|Q9LJ97|LEA31_ARATH (Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-41
Identity = 101/190 (53.16%), Postives = 129/190 (67.89%), Query Frame = 0 

Query: 11  EQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVLGQVPPAGPAD 70
           ++ QP+R      QE + YGDVF VSG+LA  PIAP+DA MM +AETRV G     G A 
Sbjct: 3   QEEQPKR-----PQEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAA 62

Query: 71  IMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQVVGQYLD---- 130
           +M++AA  N R G +   D +  A   G+ +++TD+PGARV TE V GQVVGQY++    
Sbjct: 63  VMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPV 122

Query: 131 -TTTAIETET---TEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISP 190
            T  A+E E    + Q+ ITIGEALEA  QTAGNKPV+QSDAAAIQAAE RA G+N I+P
Sbjct: 123 ATAAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAP 182

Query: 191 GGLTATAQQS 193
           GG+ A+AQ +
Sbjct: 183 GGIAASAQSA 187

[Close]
BLAST of Carg17420 vs. Swiss-Prot
Match: sp|Q9LJ95|LEA32_ARATH (Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37
Identity = 100/201 (49.75%), Postives = 128/201 (63.68%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+EQPRR      PR        E +KYGDVF VSG+LA  PIAP+DA+MM SAET V 
Sbjct: 1   MSQEQPRR------PR--------EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVF 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           G     GPA +M++AA  N+R G +   D +      G  + +T +P A V TE V GQV
Sbjct: 61  GHTQKGGPAAVMQSAATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQV 120

Query: 121 VGQYLDTTTAIETETTE----QNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATG 180
           VGQ+++    +    T+    Q+ ITIGEALEA  +TAGNKPV+QSDAAAIQAAE RA+G
Sbjct: 121 VGQHVEPRRVVAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASG 180

Query: 181 SNAISPGGLTATAQQSKLDHS 198
           +N I+  G+ A+A QS  DH+
Sbjct: 181 TNVIALAGVAASA-QSAADHN 185

[Close]
BLAST of Carg17420 vs. Swiss-Prot
Match: sp|Q8GWT7|LEA47_ARATH (Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27980 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-10
Identity = 48/95 (50.53%), Postives = 57/95 (60.00%), Query Frame = 0 

Query: 98  GINISETDIPGARVVTERVAGQVVGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNK 157
           GI  +E    G  VV E    Q  G+ ++    +      +  ITIGEALEAA  TAGNK
Sbjct: 28  GIKAAEDKEKG--VVAEASGEQAEGE-VNQKKVVANPLKSEGTITIGEALEAAVLTAGNK 87

Query: 158 PVEQSDAAAIQAAEGRATGSNAISPGGLTATAQQS 193
           PVE SDAAAIQAAE RATG   I PGG+ A+AQ +
Sbjct: 88  PVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSA 119

[Close]
BLAST of Carg17420 vs. Swiss-Prot
Match: sp|Q9SA57|LEA3_ARATH (Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g03120 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.6e-07
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 139 NVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISPGGLTATAQ 191
           + +TIGEALEA   + G+KPV++ DAAAIQAAE RATG +   PGGL   AQ
Sbjct: 56  DTVTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQ 107

[Close]
BLAST of Carg17420 vs. TrEMBL
Match: tr|A0A0A0LA96|A0A0A0LA96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146660 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 146/194 (75.26%), Postives = 164/194 (84.54%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+EQPRR E+ +Q RRND DE  ETIKYGD+FNVSGDLAANPIAP+DARMM SAETRVL
Sbjct: 1   MSQEQPRRDEQLQQSRRND-DEQLETIKYGDIFNVSGDLAANPIAPEDARMMASAETRVL 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           GQ+   GPAD+MRAAAA NVRVGLL +RD+S  AK++GINISETD+PGARVVTE VAGQV
Sbjct: 61  GQMHETGPADVMRAAAARNVRVGLLSSRDISDVAKSQGINISETDVPGARVVTECVAGQV 120

Query: 121 VGQYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAI 180
           VGQYLDTT     E  EQ+VITIG+ALEAA Q  GNKPVEQSDAAAIQAAE  ATG+NAI
Sbjct: 121 VGQYLDTTMTSGVEMPEQDVITIGQALEAACQMIGNKPVEQSDAAAIQAAEVCATGNNAI 180

Query: 181 SPGGLTATAQQSKL 195
           +PGGL ATAQ + +
Sbjct: 181 NPGGLGATAQAAAI 193

[Close]
BLAST of Carg17420 vs. TrEMBL
Match: tr|A0A1S3AXM5|A0A1S3AXM5_CUCME (late embryogenesis abundant protein D-34 OS=Cucumis melo OX=3656 GN=LOC103483707 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65
Identity = 144/192 (75.00%), Postives = 166/192 (86.46%), Query Frame = 0 

Query: 3   REQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVLGQ 62
           +EQPRR E+ +QPR+ND DE  ETIKYGDVFNVSGDLAANPIAP+DARMM SAETRVLGQ
Sbjct: 15  QEQPRRDEQLQQPRQND-DEQLETIKYGDVFNVSGDLAANPIAPEDARMMASAETRVLGQ 74

Query: 63  VPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQVVG 122
           +  AGPAD+MRAAAA+NV+VG+L +RD+S  AKN+GINISETD+PGARVV+E VAGQVVG
Sbjct: 75  MHEAGPADVMRAAAAHNVQVGVLSSRDISDVAKNQGINISETDVPGARVVSECVAGQVVG 134

Query: 123 QYLDTTTAIETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISP 182
           QYLDTTTA   E  EQ+VITIG+ALEAA Q  GNKPVEQSDAAAI AAE  ATG+NA++P
Sbjct: 135 QYLDTTTASGVEMPEQDVITIGQALEAACQIIGNKPVEQSDAAAIHAAEVCATGNNAMNP 194

Query: 183 GGLTATAQQSKL 195
           GGL ATAQ + +
Sbjct: 195 GGLGATAQAAAI 205

[Close]
BLAST of Carg17420 vs. TrEMBL
Match: tr|B9RTR0|B9RTR0_RICCO (Late embryogenesis abundant protein D-34, putative OS=Ricinus communis OX=3988 GN=RCOM_0911960 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.0e-49
Identity = 118/193 (61.14%), Postives = 139/193 (72.02%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVL 60
           MS+EQPR+  EQ       + + Q  +KYGDVFNVSGDLA+  IAP+DA MM SAET V 
Sbjct: 1   MSQEQPRKPTEQ----GGHIGQDQGPVKYGDVFNVSGDLASKTIAPEDANMMQSAETMVF 60

Query: 61  GQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQV 120
           G     G A  M+AAA  N R GL+G RD + AA   G+ ++E+D+PGAR+VTERVAGQV
Sbjct: 61  GHTQKGGAAATMQAAATRNERAGLVGHRDATDAASERGVTVTESDVPGARIVTERVAGQV 120

Query: 121 VGQYLDTTTAI-ETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNA 180
           VGQY++ T  +  T  T QN ITIGEALEA  QTAGNKPV+QSDAAAIQAAE RATGSN 
Sbjct: 121 VGQYVEATPVVGMTAGTVQNAITIGEALEATAQTAGNKPVDQSDAAAIQAAEVRATGSNV 180

Query: 181 ISPGGLTATAQQS 193
           I PGGL ATAQ +
Sbjct: 181 IIPGGLAATAQSA 189

[Close]
BLAST of Carg17420 vs. TrEMBL
Match: tr|W9R0U6|W9R0U6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005419 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47
Identity = 107/181 (59.12%), Postives = 135/181 (74.59%), Query Frame = 0 

Query: 12  QRQPRRNDVDEGQETIKYGDVFNVSGDLAANPIAPQDARMMGSAETRVLGQVPPAGPADI 71
           + QPRR      +E +KYGDVFNVSG+LA+  +AP+DA MM SAET VLGQ    GPA  
Sbjct: 130 EEQPRRPQAGRDEEAVKYGDVFNVSGELASKTVAPRDAAMMQSAETTVLGQTQKGGPAAT 189

Query: 72  MRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTERVAGQVVGQYLDTTTAI 131
           M++AA  N R G++G  D S AA++ G++++ETD+PG R+VTE VAGQVVGQY+  T A+
Sbjct: 190 MQSAATQNERAGVVGHVDASDAAEDRGVSVTETDVPGYRIVTESVAGQVVGQYVQPTPAM 249

Query: 132 ETETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEGRATGSNAISPGGLTATAQQ 191
           +      + ITIGEALEA  +TAG+KPV+QSDAAAIQAAE RATGSN I+PGGL ATAQ 
Sbjct: 250 QAAVV--SAITIGEALEATAKTAGDKPVDQSDAAAIQAAEVRATGSNVITPGGLAATAQS 308

Query: 192 S 193
           +
Sbjct: 310 A 308

[Close]
BLAST of Carg17420 vs. TrEMBL
Match: tr|A0A218WPW8|A0A218WPW8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr008585 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.3e-46
Identity = 111/200 (55.50%), Postives = 141/200 (70.50%), Query Frame = 0 

Query: 1   MSREQPRRGEEQRQPRRNDVDEGQ-----ETIKYGDVFNVSGDLAANPIAPQDARMMGSA 60
           MS+EQP+R      P++ + D+GQ     E IKYGDVFNVSGDLA+ PIAP+DA MM +A
Sbjct: 1   MSQEQPQR------PQQQEADQGQQERLLEPIKYGDVFNVSGDLASKPIAPEDAAMMQTA 60

Query: 61  ETRVLGQVPPAGPADIMRAAAAYNVRVGLLGTRDVSYAAKNEGINISETDIPGARVVTER 120
           E  V GQ    GPA ++++AA  N R GL+G RD++    ++G+ I ETD+PG+R++TE 
Sbjct: 61  EAMVFGQTQKDGPAAVIQSAAPCNERAGLVGHRDITDVTGDQGVTIIETDVPGSRIITES 120

Query: 121 VAGQVVGQYLDTTTAIE---TETTEQNVITIGEALEAAGQTAGNKPVEQSDAAAIQAAEG 180
           +AGQVVGQY+  T           +Q+ ITIGEALEAA QT G KPV+QSDAAAIQAAE 
Sbjct: 121 IAGQVVGQYVQFTPVQRPGPAAAADQSTITIGEALEAAAQTMGGKPVDQSDAAAIQAAEV 180

Query: 181 RATGSNAISPGGLTATAQQS 193
           RATGSN I+PGGL A AQ +
Sbjct: 181 RATGSNVITPGGLAALAQSA 194

The following BLAST results are available for this feature:
BLAST of Carg17420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023539062.11.4e-9398.44late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo][more]
XP_022973774.13.3e-9297.40late embryogenesis abundant protein D-34-like [Cucurbita maxima][more]
XP_022949409.14.4e-9297.40late embryogenesis abundant protein D-34-like [Cucurbita moschata][more]
XP_022974461.11.3e-9196.88late embryogenesis abundant protein D-34-like [Cucurbita maxima][more]
XP_011650977.12.0e-6575.26PREDICTED: late embryogenesis abundant protein D-34 isoform X1 [Cucumis sativus]... [more]
BLAST of Carg17420 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22490.11.0e-4253.16Seed maturation protein[more]
AT3G22500.12.0e-3849.75Seed maturation protein[more]
AT5G27980.12.7e-1150.53Seed maturation protein[more]
AT1G03120.14.8e-0859.62responsive to abscisic acid 28[more]
AT5G53260.13.8e-0542.67Seed maturation protein[more]
BLAST of Carg17420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P09444|LEA34_GOSHI1.7e-4757.73Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1[more]
sp|Q9LJ97|LEA31_ARATH1.8e-4153.16Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 ... [more]
sp|Q9LJ95|LEA32_ARATH3.6e-3749.75Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 ... [more]
sp|Q8GWT7|LEA47_ARATH4.9e-1050.53Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27... [more]
sp|Q9SA57|LEA3_ARATH8.6e-0759.62Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g031... [more]
BLAST of Carg17420 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LA96|A0A0A0LA96_CUCSA1.4e-6575.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146660 PE=4 SV=1[more]
tr|A0A1S3AXM5|A0A1S3AXM5_CUCME1.8e-6575.00late embryogenesis abundant protein D-34 OS=Cucumis melo OX=3656 GN=LOC103483707... [more]
tr|B9RTR0|B9RTR0_RICCO4.0e-4961.14Late embryogenesis abundant protein D-34, putative OS=Ricinus communis OX=3988 G... [more]
tr|W9R0U6|W9R0U6_9ROSA8.2e-4759.12Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005419 PE=4 SV=1[more]
tr|A0A218WPW8|A0A218WPW8_PUNGR5.3e-4655.50Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr008585 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007011SMP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17420-RACarg17420-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007011Late embryogenesis abundant protein, SMP subgroupPFAMPF04927SMPcoord: 141..191
e-value: 9.2E-17
score: 61.2
coord: 27..81
e-value: 8.6E-15
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..195
NoneNo IPR availablePANTHERPTHR31174:SF7LATE EMBRYOGENESIS ABUNDANT PROTEIN 31-RELATEDcoord: 12..191
NoneNo IPR availablePANTHERPTHR31174SEED MATURATION FAMILY PROTEINcoord: 12..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17420Cla009416Watermelon (97103) v1carwmB0604
Carg17420Cla021624Watermelon (97103) v1carwmB0603
Carg17420Csa3G146660Cucumber (Chinese Long) v2carcuB0633
Carg17420MELO3C006530Melon (DHL92) v3.5.1carmeB0610
Carg17420ClCG05G005140Watermelon (Charleston Gray)carwcgB0588
Carg17420ClCG06G006260Watermelon (Charleston Gray)carwcgB0589
Carg17420CSPI03G13110Wild cucumber (PI 183967)carcpiB0639
Carg17420CmaCh08G011390Cucurbita maxima (Rimu)carcmaB0850
Carg17420CmoCh08G011160Cucurbita moschata (Rifu)carcmoB0826
Carg17420CmoCh06G014110Cucurbita moschata (Rifu)carcmoB0825
Carg17420CmoCh17G002180Cucurbita moschata (Rifu)carcmoB0824
Carg17420Lsi09G013140Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17420Lsi05G016060Bottle gourd (USVL1VR-Ls)carlsiB551
Carg17420Cp4.1LG03g10660Cucurbita pepo (Zucchini)carcpeB0860
Carg17420Cp4.1LG17g01550Cucurbita pepo (Zucchini)carcpeB0858
Carg17420Cp4.1LG08g04030Cucurbita pepo (Zucchini)carcpeB0861
Carg17420MELO3C006530.2Melon (DHL92) v3.6.1carmedB0616
Carg17420CsaV3_3G013280Cucumber (Chinese Long) v3carcucB0640
Carg17420Cla97C05G086330Watermelon (97103) v2carwmbB0631
Carg17420Cla97C06G115760Watermelon (97103) v2carwmbB0632
Carg17420Bhi01G000583Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17420Carg05412Silver-seed gourdcarcarB083
Carg17420Carg15902Silver-seed gourdcarcarB347
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17420Cucurbita maxima (Rimu)carcmaB0847
Carg17420Cucurbita maxima (Rimu)carcmaB0849
Carg17420Cucurbita moschata (Rifu)carcmoB0823
Carg17420Cucurbita pepo (Zucchini)carcpeB0857
Carg17420Silver-seed gourdcarcarB545
Carg17420Cucumber (Gy14) v2carcgybB0605
Carg17420Cucumber (Gy14) v1carcgyB0681