Carg17393 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAAACAATCCAAAAATGTAAAAAGTTGGTCGTTTTATGGATCGAACCCAGAAACAGATAAGGTAGAAGACGACGATTATTAGGAAGAACATTCAAGGTATATTTCAGGGTTGTTCATACATTTGACGTCAGGGCTGAGGCAAACGATTTTGGAGGTATTGGTTGCAATTCGAACGCCGTTTTCTTTAAGTCGTTGAAATCAGAGTGAGAGCAACAAAAATGTCAGGCCCCCAGTGCTGCTCGAACCCACCGTCTCTAAACCCCACCAGCGGCGCCGGCCATGTCGAACAACTCGGCGGCCTCAGCACCTATGTCAGTGGCGCCCCCGACTCCAAAAACGCCGTCATTTTCATCACCGATGTCTATGGTACCGACCCTTTTGATTCGATTCATTGTTTTATTGTTTATTCTGTTCTGTTCTGTTCTGTTCTGTTTTCTCGCCCTTCACTTTTGATGATTCTTCTGTGGCTTGCTGTTTTCGCTTTTACTTTTGGTATAATTAGGTATTTGACTTCTGGGTAAAGCGAATTATGACTTGGGTCATTGTTTGTTTGGTTGATTCATGATCACTGTAGAGTTTTTAACAGAAATTCTTTTGGAATTCTGGATTTGATTGAAAGATTCTCGTGGGATCGTTTAGATATGGTTGAGAATTTTTGAAAGAGGAGTCCCACGTCGGCTAATTAAGAGACTGATCATGGGTTTAAAAGTAAGGAACACATCTCCATTGGTACGAGGCCTTTTGGAGAAACCAAAAGCAAGCCCATGAGAGCTTATGCCATTGTGGAGAGTCGTGGTTCCGAGTCATGCCCTTAACTTTGCCATGTCAATAGAATCCTTAAACGTTGAACGAAGAAGTTGTGACCCTCAAAGTGTTGAACAAACAGTGTACTTTGTTTAAGGGATCCAAACAAGGAGTCGAGGCTCGATTAAGAAGAGGTTGTTCAAGGGGTCCATAAGCCTCAGGAGAGGCTCTATGGTGTGCTTTGTTCGAGAGGAGCCTCACATCAGCTAATTAAGAGGTTGATCATGAGTTTATAAGTAAGGAATACATCTCCATTAGTACGAGGCCTTTTAGGGAAACTAAAAGTAAAGGCATGAGAGCTTGTGCTCAAAGTTGACAATATCATACCATTGTGGAGAGTCGTAGCTCCTAACACATATCTCGTATACATATCAACAAATTATAATCAATTAGTCATCCATATGAATATACAAACCAATAAGATAGAACATGAGATATGAACTAGGAGGTTGAATCTTTGGATTAAACTCATTTCTTGTTTAATAGGGAATATCTCTGGTGCTCTAAGCTTTTGATTCTGCCTTGATTTGCAGGATATGAAGCTCCACTTTTAAGGTATTTCTAAGATTGAAAGAGATATAATGCAATTACCACATGGCTCCACATAAGAAGGAGTTGAACATGGCTATCTTTCAATTTGTAGGAAGCTAGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATTTGTTGCAAATGATCCTAATAGGCCAATTAAAGAGTGGCTACAAGAACATGGACCTGTTAGTTCTTGCCTTTCATTTCATTACTGCAATGTTTTCTTAATTGATTATTATCTATCTTCTGCTGCTGCTGCTGAAGTTGTTAGTTTTTAGGACAAATCTGGGACTGTTTGTGAGTATATTGTTATTGATATGCGAGAGTTCGAGTTCATGTTAGTGTAATGGTTTAACAGGAGAAGTCTTTTGATGATGGGAAGGCAGTCGTTGAAGCTCTGAAAAGCAAAGGTATTTCGGCGATCGGAGCGGTCGGCATTTGTTGGGGTGGTGAGTCTATTTATCTCGTGTTTATTATTGTCGTATATTGTTCGTGATGTTAGAATCTATGAACTCAACCCACGTGAAAGAGCTTGAACAATGAAATGAAAGGCTCGACTAACGAGTTCGCACAACTATAAGTTGTTAGTCATAAAGCTAATCTTCTATGTTTTTGTACCTTAGCCAAGGTTGTGGTTGCACTTGCGAAGGTCGAGTTGATTCAAGCTGCTGTGTTGCTTCATCCGTCTTTGGTTACTGTCGATGACATTAAAGGTTTGTATTTTGGTTCCTTTATTTGCTTATAGCCATATAATGTTGTGTTCTTCAATTCTTTCATATCGTTTTCAAATGTACTTCCTCCCTCACGTTTTCTAAAATATTTCTCGCGAACGTGACTTGAGGCCTGAACATACGCTGACATTCGAATTTTTCATAGCTAACTTGTTCAATGAGTTAGAAAAAGTGCTGCACGATCGCTGTCCCGCTACTGCAAGAGTGCGATTATAACAAGTACTCTAGTCATGATCACTTCAAACCCTTTACCCTTCCGGTCTCCAAATCAAATCATTTTCTTACAAAACAAATCGTGAAGAGAATAGCTTAACGAATCATGTTCTTATAACAGCTAACTGAATCTGATGTTTGTCGATAATTTCAGAGGTCAAAGCTCACATTTCGGTGCTAGGGGCGGAGATCGATCATATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAGGCCTTGGCTGCAAAGCCTGAGGTAGTGAGAGTTGTTTTAGACTTCTTCATTCTATTTCATGTAGTTGAGTTCTTATTATATCGTTGAATCTCTTACCACGAACACGTCTAAGCTCGATATGAGTTCTCCGTGGCTGTATGTCAAATGGCAGTCCCGTTGTCGAAAATAAATGTAAATTTTGGCTTGTTGGATGTATAGGTTGATGCGTTCGTGAAGATCTTTCCGAAAGTCTCTCATGGGTGGACTGTGAGGTACAATGTTGAAGATGAAGAGGCTGTCAAATGTGCAGACGAGGCTCATGGAGACTTGTTGGCTTGGTTTACTAAGTACCTTAAGTAATTGATGAACTGCCATTTCTAGCCTTATTGCTATTGACACTGTGTGTTGTTTGCCGTTTTACTCTTTAAGCTTTTAGAATAACAAGTTTGGAATAAATTTGGAACTGCAGCAATCCATTTATTTGTTCTTCCTTATAGCCCCACTCCTT CAAAAAAACAATCCAAAAATGTAAAAAGTTGGTCGTTTTATGGATCGAACCCAGAAACAGATAAGGTAGAAGACGACGATTATTAGGAAGAACATTCAAGGTATATTTCAGGGTTGTTCATACATTTGACGTCAGGGCTGAGGCAAACGATTTTGGAGGTATTGGTTGCAATTCGAACGCCGTTTTCTTTAAGTCGTTGAAATCAGAGTGAGAGCAACAAAAATGTCAGGCCCCCAGTGCTGCTCGAACCCACCGTCTCTAAACCCCACCAGCGGCGCCGGCCATGTCGAACAACTCGGCGGCCTCAGCACCTATGTCAGTGGCGCCCCCGACTCCAAAAACGCCGTCATTTTCATCACCGATGTCTATGGATATGAAGCTCCACTTTTAAGGAAGCTAGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATTTGTTGCAAATGATCCTAATAGGCCAATTAAAGAGTGGCTACAAGAACATGGACCTGAGAAGTCTTTTGATGATGGGAAGGCAGTCGTTGAAGCTCTGAAAAGCAAAGGTATTTCGGCGATCGGAGCGGTCGGCATTTGTTGGGGTGCCAAGGTTGTGGTTGCACTTGCGAAGGTCGAGTTGATTCAAGCTGCTGTGTTGCTTCATCCGTCTTTGGTTACTGTCGATGACATTAAAGAGGTCAAAGCTCACATTTCGGTGCTAGGGGCGGAGATCGATCATATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAGGCCTTGGCTGCAAAGCCTGAGGTTGATGCGTTCGTGAAGATCTTTCCGAAAGTCTCTCATGGGTGGACTGTGAGGTACAATGTTGAAGATGAAGAGGCTGTCAAATGTGCAGACGAGGCTCATGGAGACTTGTTGGCTTGGTTTACTAAGTACCTTAAGTAATTGATGAACTGCCATTTCTAGCCTTATTGCTATTGACACTGTGTGTTGTTTGCCGTTTTACTCTTTAAGCTTTTAGAATAACAAGTTTGGAATAAATTTGGAACTGCAGCAATCCATTTATTTGTTCTTCCTTATAGCCCCACTCCTT ATGTCAGGCCCCCAGTGCTGCTCGAACCCACCGTCTCTAAACCCCACCAGCGGCGCCGGCCATGTCGAACAACTCGGCGGCCTCAGCACCTATGTCAGTGGCGCCCCCGACTCCAAAAACGCCGTCATTTTCATCACCGATGTCTATGGATATGAAGCTCCACTTTTAAGGAAGCTAGCAGATAAGGTTGCAGCTGCTGGGTTCTTTGTGGTTGCTCCTGATTTCTTCAAGGGAGATCCATTTGTTGCAAATGATCCTAATAGGCCAATTAAAGAGTGGCTACAAGAACATGGACCTGAGAAGTCTTTTGATGATGGGAAGGCAGTCGTTGAAGCTCTGAAAAGCAAAGGTATTTCGGCGATCGGAGCGGTCGGCATTTGTTGGGGTGCCAAGGTTGTGGTTGCACTTGCGAAGGTCGAGTTGATTCAAGCTGCTGTGTTGCTTCATCCGTCTTTGGTTACTGTCGATGACATTAAAGAGGTCAAAGCTCACATTTCGGTGCTAGGGGCGGAGATCGATCATATGTCTCCTCCAGAACTCTTGAAACAGTTTGAAGAGGCCTTGGCTGCAAAGCCTGAGGTTGATGCGTTCGTGAAGATCTTTCCGAAAGTCTCTCATGGGTGGACTGTGAGGTACAATGTTGAAGATGAAGAGGCTGTCAAATGTGCAGACGAGGCTCATGGAGACTTGTTGGCTTGGTTTACTAAGTACCTTAAGTAA MSGPQCCSNPPSLNPTSGAGHVEQLGGLSTYVSGAPDSKNAVIFITDVYGYEAPLLRKLADKVAAAGFFVVAPDFFKGDPFVANDPNRPIKEWLQEHGPEKSFDDGKAVVEALKSKGISAIGAVGICWGAKVVVALAKVELIQAAVLLHPSLVTVDDIKEVKAHISVLGAEIDHMSPPELLKQFEEALAAKPEVDAFVKIFPKVSHGWTVRYNVEDEEAVKCADEAHGDLLAWFTKYLK
BLAST of Carg17393 vs. NCBI nr
Match: XP_022936922.1 (endo-1,3;1,4-beta-D-glucanase [Cucurbita moschata]) HSP 1 Score: 479.6 bits (1233), Expect = 6.4e-132 Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Carg17393 vs. NCBI nr
Match: XP_023539324.1 (endo-1,3;1,4-beta-D-glucanase isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 477.2 bits (1227), Expect = 3.2e-131 Identity = 235/239 (98.33%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Carg17393 vs. NCBI nr
Match: XP_022973692.1 (endo-1,3;1,4-beta-D-glucanase [Cucurbita maxima] >XP_022973693.1 endo-1,3;1,4-beta-D-glucanase [Cucurbita maxima]) HSP 1 Score: 472.6 bits (1215), Expect = 7.8e-130 Identity = 233/239 (97.49%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of Carg17393 vs. NCBI nr
Match: XP_008438729.1 (PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X1 [Cucumis melo]) HSP 1 Score: 433.0 bits (1112), Expect = 6.8e-118 Identity = 210/239 (87.87%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of Carg17393 vs. NCBI nr
Match: XP_022137980.1 (endo-1,3;1,4-beta-D-glucanase-like [Momordica charantia]) HSP 1 Score: 423.3 bits (1087), Expect = 5.4e-115 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 0
BLAST of Carg17393 vs. TAIR10
Match: AT3G23600.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 333.6 bits (854), Expect = 1.0e-91 Identity = 156/239 (65.27%), Postives = 199/239 (83.26%), Query Frame = 0
BLAST of Carg17393 vs. TAIR10
Match: AT3G23570.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 305.8 bits (782), Expect = 2.3e-83 Identity = 147/239 (61.51%), Postives = 181/239 (75.73%), Query Frame = 0
BLAST of Carg17393 vs. TAIR10
Match: AT1G35420.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12 Identity = 57/222 (25.68%), Postives = 103/222 (46.40%), Query Frame = 0
BLAST of Carg17393 vs. Swiss-Prot
Match: sp|Q9ZT66|E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays OX=4577 PE=1 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35 Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = 0
BLAST of Carg17393 vs. Swiss-Prot
Match: sp|Q6P7K0|CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis OX=8364 GN=cmbl PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.2e-22 Identity = 71/224 (31.70%), Postives = 113/224 (50.45%), Query Frame = 0
BLAST of Carg17393 vs. Swiss-Prot
Match: sp|Q5XH09|CMBL_XENLA (Carboxymethylenebutenolidase homolog OS=Xenopus laevis OX=8355 GN=cmbl PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 71/227 (31.28%), Postives = 113/227 (49.78%), Query Frame = 0
BLAST of Carg17393 vs. Swiss-Prot
Match: sp|Q96DG6|CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens OX=9606 GN=CMBL PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.0e-16 Identity = 66/226 (29.20%), Postives = 110/226 (48.67%), Query Frame = 0
BLAST of Carg17393 vs. Swiss-Prot
Match: sp|Q5RBU3|CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii OX=9601 GN=CMBL PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16 Identity = 66/226 (29.20%), Postives = 110/226 (48.67%), Query Frame = 0
BLAST of Carg17393 vs. TrEMBL
Match: tr|A0A1S3AWR8|A0A1S3AWR8_CUCME (endo-1,31,4-beta-D-glucanase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483753 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 4.5e-118 Identity = 210/239 (87.87%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of Carg17393 vs. TrEMBL
Match: tr|A0A0A0LAG0|A0A0A0LAG0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150110 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 5.2e-114 Identity = 205/239 (85.77%), Postives = 221/239 (92.47%), Query Frame = 0
BLAST of Carg17393 vs. TrEMBL
Match: tr|A0A1S3AXT3|A0A1S3AXT3_CUCME (endo-1,31,4-beta-D-glucanase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483751 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110 Identity = 197/235 (83.83%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of Carg17393 vs. TrEMBL
Match: tr|A0A1S4DSY2|A0A1S4DSY2_CUCME (endo-1,31,4-beta-D-glucanase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483751 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 3.8e-109 Identity = 197/237 (83.12%), Postives = 215/237 (90.72%), Query Frame = 0
BLAST of Carg17393 vs. TrEMBL
Match: tr|A0A2P4HZI6|A0A2P4HZI6_QUESU (Endo-1,3-1,4-beta-d-glucanase OS=Quercus suber OX=58331 GN=CFP56_51323 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 8.6e-101 Identity = 180/239 (75.31%), Postives = 207/239 (86.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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