Carg17347 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCGATTGGGTTTTGGTTAAAAATTCAAATCTTGGACAAAACTCGTCCCCATCTCTCCTCTCATTGTTCTTCTTTCTCCCCCTCAATTCCCTCAAATTTTGAATTTTGATCTCCATTTCACCCTCACCCACCCTTTTTAAAACCCTAATTTTTCAACTCATCAGATTCTGAATCTCCATTTCAGGCCGATTCGATCCCTGCTTCAATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCGTGAGTTCCCTTCATTCCTTCGTTTTCAGTTTCTCATTCATTCTGGCTTTCGGGCTTTATCAACTTTGTTGTTTTTGTTTCTTTCTTGTTCACAGAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGTATTGTTTTCTACAATGTGTTTATAATTCTTGAATTTAACTCCAATCTTAACAGATTTTGACTTGTCTCTTCTCAGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGTGGAGTCTAAGATATAAAATGTCCTAGCTGTGAGATAAAGTTGGATGTTCTTGGTCATTTACTTGTTTTTGTGCTCTGATTTTGTGAACTTTCCTTGTGTTTGAGCATTTCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGTAAGTTAATAATGTATTGCTTGTTTTCTTCATTCTTTTCTTTGTATTCATATCTTTCTTAAAAGTAGGCTTATCTCTGTCAGAATGCCTTGTTCTAAGATATCTGTGTTTTAGTTTTCTTTGATGGGTCTATATGATCCATAAACAAGTTGGTCATCCAAATGGAGTGTTTGAAGATTGGATCCTGTGGCTTATACTGTGAGATCCACCTTAGTTAGGAGGAGAACGAATCATTCTTTATAAGGGTGTGGAAACCACTCCCTAGAAGAGACGTTTTAAAAACCTTGAGGAGAAGCCCAAAAGGAAAACCCAAAGATGACAAATATCTACTAGCGGTGGGCTTGGGCCGTTACAAATGGTATTAGAGCCAGATAACGGGCGATGTGCCAATAAGGACATTGGGCTCTAAAGGGGGTGGATTGGGAGGTCTTACAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCTGATAGCGGTGAGCTTGGACTGTTACAATATCAGTTAACTGATTCTTGGTAGTTCGAAAAGGGTTTCGAGTCTGCTAATGTTTCCAGCAGAGGATACTTGATCCCTCAATACCTTGGTTTAGAAGGGAAAAAAAAGAACATATGATATTAATGACCCTTTTGTTGGTCACGCATATTCCTGTTCTTTTCTGCTTTTGTATCTGTTTCTCCAGCATCACTTGACATAGGCATTCAATTCTCATACAGGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGTAAGCCAAATGCTTCACTCAGATTGAATGTGCTAAGGGTAATAAATTTGTGGCATGAAAGCAGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTAAGTTCTAATTCTAATGACTTTCATACTCAACAAAATACCTCCAACCCGCCTCGTCCCACCGTATGTTTTCAACAGCCATTGAAGAAAATTTATGAATCCTGGCAGGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAAGAGAATTTCCATTGTGTTCGTAATGTGGCGATGGATTTCCACGTTTGACTGTTTTTCAAAGCTTTGTAATGGGATTGATAAGATTTTCCCGGCATTTAAGGAAGCATTGAATTTGTAAGTGTAATTTTTTACACGCACATCAACATTAATAAGTTCATTCTTCAAGGATATATGTATTTAATTTTTGGGAAGCAGGGCTGGTGGTATCGATTTTTTTCTCAACTAGCAAATTGGACTACTCAAAGGCTCCTATTTATATTCCTTTGTGGGTTCATA GAGCGATTGGGTTTTGGTTAAAAATTCAAATCTTGGACAAAACTCGTCCCCATCTCTCCTCTCATTGTTCTTCTTTCTCCCCCTCAATTCCCTCAAATTTTGAATTTTGATCTCCATTTCACCCTCACCCACCCTTTTTAAAACCCTAATTTTTCAACTCATCAGATTCTGAATCTCCATTTCAGGCCGATTCGATCCCTGCTTCAATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAAGAGAATTTCCATTGTGTTCGTAATGTGGCGATGGATTTCCACGTTTGACTGTTTTTCAAAGCTTTGTAATGGGATTGATAAGATTTTCCCGGCATTTAAGGAAGCATTGAATTTGTAAGTGTAATTTTTTACACGCACATCAACATTAATAAGTTCATTCTTCAAGGATATATGTATTTAATTTTTGGGAAGCAGGGCTGGTGGTATCGATTTTTTTCTCAACTAGCAAATTGGACTACTCAAAGGCTCCTATTTATATTCCTTTGTGGGTTCATA ATGGCGAACGCCGACTCTTCCACTCCCTCCACCCCTGCCCCCGTTCCTACATCAGCCAAGAAGGAGAATCTCACCCCCATTGGCTTGAAAATTATGGAATTGAACGAATCAAGAGCAGAGCTGCTTGATAGAATTCAATTTCTTAAGCAGGATCTCCAGAATTGGAGGTTAAAGCTAGACACACAAGTTAATACCTACCGAAGTGAACTGTCTGAACTCAAGAAATCGCTCAACGTTGAGGTGGAGCAACTTCGCACGGAATTCAGAGAACTAAGGACAACCCTTCAGCAGCAACAAGAAGATGTGACAACTAGCCTGAGGAACTTGGGTGTTCAGGATGATTCTAAGGACAACAACAAGACTCGACATCAACATCCTGTAGCGGAAAGCAGCGACAAGGAAGACGAAGACGAGGGTAAGAAGGATGGACTCCATGGCTTAACAGAGGGTAAGGGAAATGAAGCTGAAAATTAA MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLDTQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNKTRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN
BLAST of Carg17347 vs. NCBI nr
Match: XP_022948034.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]) HSP 1 Score: 96.7 bits (239), Expect = 7.6e-17 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Carg17347 vs. NCBI nr
Match: XP_023539906.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14 Identity = 153/157 (97.45%), Postives = 154/157 (98.09%), Query Frame = 0
BLAST of Carg17347 vs. NCBI nr
Match: XP_022973788.1 (uncharacterized protein LOC111472345 [Cucurbita maxima] >XP_022975171.1 uncharacterized protein LOC111474206 [Cucurbita maxima]) HSP 1 Score: 87.4 bits (215), Expect = 4.6e-14 Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0
BLAST of Carg17347 vs. NCBI nr
Match: XP_022137849.1 (uncharacterized protein LOC111009183 [Momordica charantia]) HSP 1 Score: 70.9 bits (172), Expect = 4.5e-09 Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Carg17347 vs. NCBI nr
Match: XP_002315556.2 (uncharacterized protein LOC7475952 [Populus trichocarpa] >PNT14319.1 hypothetical protein POPTR_010G024600v3 [Populus trichocarpa]) HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of Carg17347 vs. TrEMBL
Match: tr|B9HSB7|B9HSB7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024600v3 PE=4 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-06 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of Carg17347 vs. TrEMBL
Match: tr|A0A2K1YMT3|A0A2K1YMT3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G024600v3 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-06 Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0
BLAST of Carg17347 vs. TrEMBL
Match: tr|B9RT40|B9RT40_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0680850 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Carg17347 vs. TrEMBL
Match: tr|V4S7G5|V4S7G5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006148mg PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of Carg17347 vs. TrEMBL
Match: tr|A0A2N9IC75|A0A2N9IC75_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49353 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.4e-05 Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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