Carg17334 (gene) Silver-seed gourd

Overview
NameCarg17334
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBidirectional sugar transporter SWEET
LocationCucurbita_argyrosperma_scaffold_092 : 78555 .. 80051 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGTGTCGGTTGTGAATTTTCAGACGAAGACTGGAATTATGGTAGGGATTCTGGATATCGGCTTCCTTGCGACTGCGATTGTGGTGAGTCAATTACTGTTAGACGGTGAAACGCGTGTTGGAGCCCTAGGGTTTGTTTGTGCAGGCCTTAATATCATTATGTACGGCTCGCCGCTCTCTATCATGGTAAGGTTGTGCTGCAACTTTAAGCTTTCTGTCTGTCCTTTTACGGAACGGTCCAATAAGCTTCAACTTTCTTGGCTCTGTTATTGCTTTGAATTTTGATCTTTATATTTATTGCCTTATTTAAAACATAGAATAATTAGAAATTTACGTATGAAATTCCACCCTTTGTCAAGACAAAAAAATCCAAAAAACTAATTTAAGGACGAAAATAGAGTCACGTGTAGGAGGGAGAAAAATCAAGTAATGATTGATAAACACTGTTACTGATATGTCTAATTAATTTCATCCATCTGTTCCAATTCTGCAGCTATGAAATCATTAATGTGTAGGACCCAACCTTGTGTTTTCTTTCCCATAAATATCAACGTTTCTCTAATTTTTTTTCCAACTATTTCTTTTCCATTTTAATTTTGAGTTTCTAGAAATTGAATCTTGTTGATTGCAGAAAACGGTGATAAAAAATAGAAGCGTGGAGTATATGCCTTTCATGCTATCGTTCTTCTTTTTCTTGAACGGAGGAATCTGGACTTTCTATGCTTTTCTCTTGAGCGATTGGTTTCTTGCAGTAAGTGTTCTTCATATAATCTTCACTATGTAAAAAATCTGAAAATTAAAATAAGTGATTTGAACAATTGTGCAGGTTCCAAATGGGATAGGATTAGGGTTGGGATTAGCACAGATTGCTATCTATGGAGTTTACAGAAATGCCAAGCCACTGCCATTGAAGACCTCAATCCCAACTCAACAAGAACAAGACTCGCAAACCCAACCCCTCATTTCTTCTTCAAATCCCGAACCCTAATTTCGGGTCATCTCTTCTTTCATCGATATAATTCTTTTTTGTTGAAGAATTTTGAGTTTGTTTTATGCATATTTTGATTGTTTTTGAAGGCTGTAAGTCATCATGAAACATTAGGTGTCCATACATGTATGCGTTATATACCTACCATGGTTAAATCCTTTTCGTATCAATCACTTGTTTACTATCTAAGTTCATCAACGAGTAAGTTACCAAATTTAGACAAGTTTGTAATGGCTATCAACTCCAATGCCGCAGAAGCCCGAAAGATCTGAGCCCATAGCTGAGCCCAGCCCAGCACGTCCTCCAAATCTGTTCAGTATACGCAGCATGTGGCCCACGTGAGCATTGGAATCTTGCTATTACAACAATAAATTAAATAATTCTAGCATATTAAAATTTTTATATTACTTATAACCCTTAGTTCGTACCAGGTGTGACATTATATTCAAAGAAATTTTTAAGAACCGAAAATTTTATCTAAACATGAGACTTCTATGAATCATTGA

mRNA sequence

ATGTGTGTGTCGGTTGTGAATTTTCAGACGAAGACTGGAATTATGGTAGGGATTCTGGATATCGGCTTCCTTGCGACTGCGATTGTGGTGAGTCAATTACTGTTAGACGGTGAAACGCGTGTTGGAGCCCTAGGGTTTGTTTGTGCAGGCCTTAATATCATTATGTACGGCTCGCCGCTCTCTATCATGGTTCCAAATGGGATAGGATTAGGGTTGGGATTAGCACAGATTGCTATCTATGGAGTTTACAGAAATGCCAAGCCACTGCCATTGAAGACCTCAATCCCAACTCAACAAGAACAAGACTCGCAAACCCAACCCCTCATTTCTTCTTCAAATCCCGAACCCTAATTTCGGGTCATCTCTTCTTTCATCGATATAATTCTTTTTTGTTGAAGAATTTTGAGTTTGTTTTATGCATATTTTGATTGTTTTTGAAGGCTGTAAGTCATCATGAAACATTAGGTGTCCATACATGTATGCGTTATATACCTACCATGGTTAAATCCTTTTCGTATCAATCACTTGTTTACTATCTAAGTTCATCAACGAGTAAGTTACCAAATTTAGACAAGTTTGTAATGGCTATCAACTCCAATGCCGCAGAAGCCCGAAAGATCTGAGCCCATAGCTGAGCCCAGCCCAGCACGTCCTCCAAATCTGTTCAGTATACGCAGCATGTGGCCCACGTGAGCATTGGAATCTTGCTATTACAACAATAAATTAAATAATTCTAGCATATTAAAATTTTTATATTACTTATAACCCTTAGTTCGTACCAGGTGTGACATTATATTCAAAGAAATTTTTAAGAACCGAAAATTTTATCTAAACATGAGACTTCTATGAATCATTGA

Coding sequence (CDS)

ATGTGTGTGTCGGTTGTGAATTTTCAGACGAAGACTGGAATTATGGTAGGGATTCTGGATATCGGCTTCCTTGCGACTGCGATTGTGGTGAGTCAATTACTGTTAGACGGTGAAACGCGTGTTGGAGCCCTAGGGTTTGTTTGTGCAGGCCTTAATATCATTATGTACGGCTCGCCGCTCTCTATCATGGTTCCAAATGGGATAGGATTAGGGTTGGGATTAGCACAGATTGCTATCTATGGAGTTTACAGAAATGCCAAGCCACTGCCATTGAAGACCTCAATCCCAACTCAACAAGAACAAGACTCGCAAACCCAACCCCTCATTTCTTCTTCAAATCCCGAACCCTAA

Protein sequence

MCVSVVNFQTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLISSSNPEP
Homology
[Close]
BLAST of Carg17334 vs. NCBI nr
Match: XP_022937945.1 (bidirectional sugar transporter SWEET16 [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 106/148 (71.62%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           +TKTGIMVGILDIGFLATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLSIM     
Sbjct: 94  KTKTGIMVGILDIGFLATAIVVSQLLLDGETRIGALGFVCAGLNIIMYGSPLSIMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNAKP 117
                                              VPNGIGLGLGLAQIAIYGVYRNAKP
Sbjct: 154 NRSVEYMPFMLSFFFFLNGGIWTFYAFLLSDWFLAVPNGIGLGLGLAQIAIYGVYRNAKP 213

[Close]
BLAST of Carg17334 vs. NCBI nr
Match: XP_023539111.1 (bidirectional sugar transporter SWEET16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.4 bits (446), Expect = 5.6e-41
Identity = 102/148 (68.92%), Postives = 105/148 (70.95%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           + KTGIMVGILDIGF ATAIVVSQLLLDGETR+GALGFVCAGLNIIMYGSPLS+M     
Sbjct: 94  KAKTGIMVGILDIGFFATAIVVSQLLLDGETRIGALGFVCAGLNIIMYGSPLSVMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNAKP 117
                                              VPNGIGLGLGLAQIAIYGVYRNAKP
Sbjct: 154 NRSVEYMPFMLSFFFFLNGGIWTFYAFLLSDWFLAVPNGIGLGLGLAQIAIYGVYRNAKP 213

[Close]
BLAST of Carg17334 vs. NCBI nr
Match: XP_023522068.1 (bidirectional sugar transporter SWEET17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 101/148 (68.24%), Postives = 105/148 (70.95%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           + KTGIMVGILDIGF ATAIVVSQL+LDGETR+GALGFVCAGLNIIMYGSPLS+M     
Sbjct: 94  KAKTGIMVGILDIGFFATAIVVSQLVLDGETRIGALGFVCAGLNIIMYGSPLSVMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNAKP 117
                                              VPNGIGLGLGLAQIAIYGVYRNAKP
Sbjct: 154 NRSVEYMPFMLSFFFFLNGGIWTFYAFLLSDWFLAVPNGIGLGLGLAQIAIYGVYRNAKP 213

[Close]
BLAST of Carg17334 vs. NCBI nr
Match: XP_022973801.1 (bidirectional sugar transporter SWEET17-like [Cucurbita maxima])

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 101/148 (68.24%), Postives = 104/148 (70.27%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           +TKTGIMVGILDIGF ATAIVVSQLLL GETR+GALG VCAGLNIIMYGSPLS+M     
Sbjct: 94  KTKTGIMVGILDIGFFATAIVVSQLLLHGETRIGALGLVCAGLNIIMYGSPLSVMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNAKP 117
                                              VPNGIGLGLGLAQIAIYGVYRNAKP
Sbjct: 154 NRSVEYMPFMLSFFFFLNGGIWTFYAFLLSDWFLAVPNGIGLGLGLAQIAIYGVYRNAKP 213

[Close]
BLAST of Carg17334 vs. NCBI nr
Match: XP_004134220.1 (PREDICTED: bidirectional sugar transporter SWEET17 [Cucumis sativus] >KGN57125.1 hypothetical protein Csa_3G159450 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 8.7e-26
Identity = 80/151 (52.98%), Postives = 94/151 (62.25%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           + KTGIMVGILDIG L  AIVVS+L+L+GE R+ ALGFVCAGLNI+MY SPLS+M     
Sbjct: 94  KAKTGIMVGILDIGMLTAAIVVSELVLEGEKRIEALGFVCAGLNIMMYASPLSVMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNA-K 117
                                              VPNG+GLGLGL Q+ +Y +YRNA K
Sbjct: 154 SRSVEYMPFMLSLFFSLNGGIWTFYAFLVHDWFLAVPNGMGLGLGLIQLLLYAIYRNARK 213

[Close]
BLAST of Carg17334 vs. TAIR10
Match: AT4G15920.1 (Nodulin MtN3 family protein)

HSP 1 Score: 60.5 bits (145), Expect = 8.1e-10
Identity = 46/150 (30.67%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 7   NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS---- 66
           + + KT  +  +L++ F   AIV ++   + E  R  ++GF+ AGLNIIMYGSPLS    
Sbjct: 92  HLKLKTVDVEAMLNVFFPIAAIVATRSAFEDEKMRSQSIGFISAGLNIIMYGSPLSAMKT 151

Query: 67  ------------------------------------IMVPNGIGLGLGLAQIAIYGVYRN 111
                                               ++VPNG+G   G  Q+ +YG+YRN
Sbjct: 152 VVTTKSVKYMPFWLSFFLFLNGAIWAVYALLQHDVFLLVPNGVGFVFGTMQLILYGIYRN 211

[Close]
BLAST of Carg17334 vs. TAIR10
Match: AT3G16690.1 (Nodulin MtN3 family protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-09
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0 

Query: 11  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS-------- 70
           KT ++V  L++ F   AI  ++ L  D  +R  ++GF+CA LNIIMYGSPLS        
Sbjct: 96  KTVVVVLALNVCFPVIAIAGTRTLFGDANSRSSSMGFICATLNIIMYGSPLSAIKTVVTT 155

Query: 71  --------------------------------IMVPNGIGLGLGLAQIAIYGVYRNAKPL 90
                                           ++VPNG+G  LG+ Q+ IY  YRNA+P+
Sbjct: 156 RSVQFMPFWLSFFLFLNGAIWGVYALLLHDMFLLVPNGMGFFLGIMQLLIYAYYRNAEPI 215

[Close]
BLAST of Carg17334 vs. Swiss-Prot
Match: sp|Q84WN3|SWT17_ARATH (Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana OX=3702 GN=SWEET17 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08
Identity = 46/150 (30.67%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 7   NFQTKTGIMVGILDIGFLATAIVVSQLLLDGE-TRVGALGFVCAGLNIIMYGSPLS---- 66
           + + KT  +  +L++ F   AIV ++   + E  R  ++GF+ AGLNIIMYGSPLS    
Sbjct: 92  HLKLKTVDVDAMLNVFFPIAAIVATRSAFEDEKMRSQSIGFISAGLNIIMYGSPLSAMKT 151

Query: 67  ------------------------------------IMVPNGIGLGLGLAQIAIYGVYRN 111
                                               ++VPNG+G   G  Q+ +YG+YRN
Sbjct: 152 VVTTKSVKYMPFWLSFFLFLNGAIWAVYALLQHDVFLLVPNGVGFVFGTMQLILYGIYRN 211

[Close]
BLAST of Carg17334 vs. Swiss-Prot
Match: sp|Q9LUR4|SWT16_ARATH (Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana OX=3702 GN=SWEET16 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-08
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0 

Query: 11  KTGIMVGILDIGFLATAIVVSQLLL-DGETRVGALGFVCAGLNIIMYGSPLS-------- 70
           KT ++V  L++ F   AI  ++ L  D  +R  ++GF+CA LNIIMYGSPLS        
Sbjct: 96  KTVVVVLALNVCFPVIAIAGTRTLFGDANSRSSSMGFICATLNIIMYGSPLSAIKTVVTT 155

Query: 71  --------------------------------IMVPNGIGLGLGLAQIAIYGVYRNAKPL 90
                                           ++VPNG+G  LG+ Q+ IY  YRNA+P+
Sbjct: 156 RSVQFMPFWLSFFLFLNGAIWGVYALLLHDMFLLVPNGMGFFLGIMQLLIYAYYRNAEPI 215

[Close]
BLAST of Carg17334 vs. Swiss-Prot
Match: sp|P0DKJ5|SWT15_VITVI (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.8e-05
Identity = 29/118 (24.58%), Postives = 51/118 (43.22%), Query Frame = 0 

Query: 19  LDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM--------------- 78
           L++G  +  +V+ Q LL G  R+   G++CA  ++ ++ +PLSI+               
Sbjct: 111 LNVGVFSILVVLIQFLLKGSNRINVFGWICASFSVAVFAAPLSIVAKVIRTKSVEFMPFS 170

Query: 79  -------------------------VPNGIGLGLGLAQIAIYGVYRNAKPLPLKTSIP 97
                                    +PN +G+ LGL Q+ +YG YRNA    ++  +P
Sbjct: 171 LSFFLTLSAIMWFAYGLLKNDPCVAIPNILGVILGLVQMVLYGFYRNAGKEKMEKKLP 228

[Close]
BLAST of Carg17334 vs. TrEMBL
Match: tr|A0A0A0L599|A0A0A0L599_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_3G159450 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.7e-26
Identity = 80/151 (52.98%), Postives = 94/151 (62.25%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIM----- 68
           + KTGIMVGILDIG L  AIVVS+L+L+GE R+ ALGFVCAGLNI+MY SPLS+M     
Sbjct: 94  KAKTGIMVGILDIGMLTAAIVVSELVLEGEKRIEALGFVCAGLNIMMYASPLSVMKTVIK 153

Query: 69  -----------------------------------VPNGIGLGLGLAQIAIYGVYRNA-K 117
                                              VPNG+GLGLGL Q+ +Y +YRNA K
Sbjct: 154 SRSVEYMPFMLSLFFSLNGGIWTFYAFLVHDWFLAVPNGMGLGLGLIQLLLYAIYRNARK 213

[Close]
BLAST of Carg17334 vs. TrEMBL
Match: tr|A0A1U8K0T7|A0A1U8K0T7_GOSHI (bidirectional sugar transporter SWEET17-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107912452 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.6e-22
Identity = 58/100 (58.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 11  KTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGL 70
           KTG++VGIL++GF+A+AIVV+QL L+ ET++GA+G +C+GLNIIMYGSPL+ MVPNGIG 
Sbjct: 98  KTGVLVGILNVGFVASAIVVTQLALESETQIGAIGLMCSGLNIIMYGSPLAAMVPNGIGC 157

Query: 71  GLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLIS 111
            LG AQ+ +Y +Y+NAKP    TS+    E   Q +PL+S
Sbjct: 158 LLGTAQLLLYAIYKNAKP-SNNTSLQGLME---QKEPLVS 193

[Close]
BLAST of Carg17334 vs. TrEMBL
Match: tr|A0A0D2PNE2|A0A0D2PNE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G061100 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 0 

Query: 11  KTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGIGL 70
           KTG++VGIL++GF+A AIVV+QL L+ ET++GA+G +C+GLNIIMYGSPL+ MVPNGIG 
Sbjct: 98  KTGVLVGILNVGFVAAAIVVTQLALESETQIGAIGLMCSGLNIIMYGSPLAAMVPNGIGC 157

Query: 71  GLGLAQIAIYGVYRNAKPLPLKTSIPTQQEQDSQTQPLIS 111
            LG AQ+ +Y +Y+NAKP    TS+    E   Q +PL+S
Sbjct: 158 LLGTAQLLLYAIYKNAKP-SNNTSLQGLME---QKEPLVS 193

[Close]
BLAST of Carg17334 vs. TrEMBL
Match: tr|A0A1U8KEG9|A0A1U8KEG9_GOSHI (bidirectional sugar transporter SWEET17-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107916180 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/80 (63.75%), Postives = 68/80 (85.00%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGI 68
           + KTGI+VGIL++GFLA AI+V+ L L+G+TR+ A+GF+CAGLNIIMYGSPL+ MVPNGI
Sbjct: 94  RVKTGILVGILNVGFLAAAILVTHLALEGDTRIDAIGFMCAGLNIIMYGSPLAAMVPNGI 153

Query: 69  GLGLGLAQIAIYGVYRNAKP 89
           G  LG AQ+ +Y ++R A+P
Sbjct: 154 GFLLGTAQLILYAIFRKARP 173

[Close]
BLAST of Carg17334 vs. TrEMBL
Match: tr|A0A0D2SZ06|A0A0D2SZ06_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G1917001 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21
Identity = 51/80 (63.75%), Postives = 68/80 (85.00%), Query Frame = 0 

Query: 9   QTKTGIMVGILDIGFLATAIVVSQLLLDGETRVGALGFVCAGLNIIMYGSPLSIMVPNGI 68
           + KTGI+VGIL++GFLA AI+V+ L L+G+TR+ A+GF+CAGLNIIMYGSPL+ MVPNGI
Sbjct: 94  RVKTGILVGILNVGFLAAAILVTHLALEGDTRIDAIGFMCAGLNIIMYGSPLAAMVPNGI 153

Query: 69  GLGLGLAQIAIYGVYRNAKP 89
           G  LG AQ+ +Y ++R A+P
Sbjct: 154 GFLLGTAQLILYAIFRKARP 173

The following BLAST results are available for this feature:
BLAST of Carg17334 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937945.13.5e-4371.62bidirectional sugar transporter SWEET16 [Cucurbita moschata][more]
XP_023539111.15.6e-4168.92bidirectional sugar transporter SWEET16-like [Cucurbita pepo subsp. pepo][more]
XP_023522068.11.2e-4068.24bidirectional sugar transporter SWEET17-like [Cucurbita pepo subsp. pepo][more]
XP_022973801.11.6e-4068.24bidirectional sugar transporter SWEET17-like [Cucurbita maxima][more]
XP_004134220.18.7e-2652.98PREDICTED: bidirectional sugar transporter SWEET17 [Cucumis sativus] >KGN57125.1... [more]
BLAST of Carg17334 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15920.18.1e-1030.67Nodulin MtN3 family protein[more]
AT3G16690.13.1e-0933.33Nodulin MtN3 family protein[more]
BLAST of Carg17334 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84WN3|SWT17_ARATH1.9e-0830.67Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana OX=3702 GN=SWEET... [more]
sp|Q9LUR4|SWT16_ARATH5.6e-0833.33Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana OX=3702 GN=SWEET... [more]
sp|P0DKJ5|SWT15_VITVI5.8e-0524.58Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE... [more]
BLAST of Carg17334 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L599|A0A0A0L599_CUCSA5.7e-2652.98Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_3G159450... [more]
tr|A0A1U8K0T7|A0A1U8K0T7_GOSHI8.6e-2258.00bidirectional sugar transporter SWEET17-like isoform X2 OS=Gossypium hirsutum OX... [more]
tr|A0A0D2PNE2|A0A0D2PNE2_GOSRA1.1e-2158.00Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G061100 PE=3 ... [more]
tr|A0A1U8KEG9|A0A1U8KEG9_GOSHI1.9e-2163.75bidirectional sugar transporter SWEET17-like isoform X2 OS=Gossypium hirsutum OX... [more]
tr|A0A0D2SZ06|A0A0D2SZ06_GOSRA1.9e-2163.75Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G1917001 PE=3... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17334-RACarg17334-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..116
NoneNo IPR availablePANTHERPTHR10791RAG1-ACTIVATING PROTEIN 1coord: 8..63
NoneNo IPR availablePANTHERPTHR10791:SF29BIDIRECTIONAL SUGAR TRANSPORTER SWEET16-RELATEDcoord: 8..63

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17334ClCG05G006190Watermelon (Charleston Gray)carwcgB0588
Carg17334CmaCh06G015100Cucurbita maxima (Rimu)carcmaB0849
Carg17334CmoCh06G015060Cucurbita moschata (Rifu)carcmoB0825
Carg17334Cp4.1LG08g05020Cucurbita pepo (Zucchini)carcpeB0861
Carg17334Cla97C05G087740Watermelon (97103) v2carwmbB0631
Carg17334Bhi01G000731Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17334Wax gourdcarwgoB0720
Carg17334Silver-seed gourdcarcarB083
Carg17334Silver-seed gourdcarcarB543
Carg17334Cucumber (Gy14) v2carcgybB0605
Carg17334Cucumber (Gy14) v1carcgyB0681
Carg17334Cucurbita maxima (Rimu)carcmaB0847
Carg17334Cucurbita maxima (Rimu)carcmaB0848
Carg17334Cucurbita maxima (Rimu)carcmaB0850
Carg17334Cucurbita moschata (Rifu)carcmoB0823
Carg17334Cucurbita moschata (Rifu)carcmoB0824
Carg17334Cucurbita moschata (Rifu)carcmoB0826
Carg17334Cucurbita pepo (Zucchini)carcpeB0857
Carg17334Cucurbita pepo (Zucchini)carcpeB0859
Carg17334Cucurbita pepo (Zucchini)carcpeB0860
Carg17334Wild cucumber (PI 183967)carcpiB0639
Carg17334Cucumber (Chinese Long) v2carcuB0633
Carg17334Cucumber (Chinese Long) v3carcucB0640
Carg17334Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17334Bottle gourd (USVL1VR-Ls)carlsiB552
Carg17334Melon (DHL92) v3.5.1carmeB0609
Carg17334Melon (DHL92) v3.5.1carmeB0610
Carg17334Melon (DHL92) v3.6.1carmedB0615
Carg17334Melon (DHL92) v3.6.1carmedB0616
Carg17334Watermelon (Charleston Gray)carwcgB0589
Carg17334Watermelon (97103) v1carwmB0603
Carg17334Watermelon (97103) v1carwmB0604
Carg17334Watermelon (97103) v2carwmbB0632