Carg17204 (gene) Silver-seed gourd

NameCarg17204
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_110 : 404437 .. 406930 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCGATTGCCGATCATGGGCCGTTTACTGGTCTCACGTTATGGGTCCATGAGGAGAAATTCTGGCCCAAGAAAGCAGGGGCAAAATCGTCAATGGGTAGCGGAGAAGGAAACCCTAAAATGACTTGCCCATTCTCCTTTAAATAGTACACAGCTTCTTGACTCTTTACTCAAACGCTCTATTTCGATTTTAGGGGTACTAAGCTGCGCGCTCTGCATGACGAATCCTCTCGTCTGCTTCTTGTTTTGATGGTTTCTTGTTCATATAATGGCGTTGTTTTTCTGTGCTCAATTTAGAACCAGATGATGATTTTGGATTCAAATTCTCACGACGGTCGTCTGAGACGACGCTTTACGTGTCGATATTGATGCAATGATCCATTTCTTCTGATGGTCTAGTTTTTCTTCTTTACCTCTGAGAAAATTCTCTTTTATAAAACACCTTTGCTCCTGCAAACGAATTCTGATTCTGATTTCTTTTTCTGAATGCGTTTTCTATGCGATGAAGGCTATTCTATTGCTTTTGTGATTGGTGCAAGCATAGTGATGATGATTTAAACCTGTCCGATCAATCTAATGACTGGAATAACAACCTCCTACTCATACTGAATGCTTGCCTATTTTAAAGCTACGCCTTCTAATGTTTCCTGTTTTTGATTTTTTATTCCGTCTGTCTACTTCGTTTGATTTTTTTTTTGTTTACAATGGCACCATGAGGATTCACTTGTATTCAGCATGAGATTCAAGGATCAGTGAATTTGAAGCACAAATTATAAAGTCCTTTTCATTCTGAGTGCCCTAATTTAAGCAGCTTAAGAAGTCCTCTTCCTTTTCCTTCCGAGTGTCCTTTCATACCGAGTCCTTTTTACTAATTTAGCAGCCTAAAAAACTTTTCGTGTTTATTCTGACTGTTAAATTCTTTCTTTCTTTTTACCATCAATTTTAAGTTCTTTCTTACCAAATGATTTATAGGTATACGAGATAAAAATTACAATGATATGACTATGATTTACAAATTTTCGTCCAATGATGTATTGATCGGTTCATTTCTCTTGACTGTCTTGTCCGATTAGTGCTGGTTTAGTCATCAGCCACAGTAGAAATATGTTTGTCATTGATATGTTTTGAAAATTAGTGGCTAGTTTGTTGCCTATGTATGAATAGTTGTCCTTCCAGAGCCGCATATACCTCAAATCCATTCGTAGAGTGAAAAAATACATGCGACGTTGATCGGGCAAAATAAGATTATTAAGTTGCAGTTAGAAAAAGTAATCCCAGTTTATCATTCTCTTCGGAATGTAAATGTAGTAACGCGTCTTGACAAATTGACCATTGTGCGACATTGTAAACTGGCACTACCATGGAATTGGTATTACATAAATGAAACTCAGGTTTAACTGTAATGATGTATCTAATGAACTACCGTGTCCTAACCGGAAGGCACTAAAAATCCTTTTTGCATTGATTCATAACTTCATGTTCCAATACGTTATACTGCTTGAAACCCGCTCATTTAGATGAACCCGAACCTCCTCCCCATTTGAACCTTTCTCTGTTCGACCAACTTTAATGTAACTAGAAGTCTGTCTTTTATTATATTTTCACATCATTAACCAATATTACATCTGTAGTACGTTTTGCATCCCAACCCTCCCAGGCCGACTTACTCCGTCAACAAATTACACGTTCACTATGCATTATATCATTGATCACCAATGACTTTTTACATTTCCTTTCTCACCGTTTGTTATTTTATCTTAAATTTCCAGTTCTTCGAGTTCAACGTCATAATCAGCATCCGAGACAGTTTTCACAGAAGCTCAGACATGTAAAAGTAGGCCTTAGCAGGTACAGAAGAATAGATGCCTCTGCCATCTCACTCGGCAGGAAAGTGGCTAGACAATCAAAATCAGAATCTAGACTACTAATGGACAGTCTAACATTCATCTACACAGGAGCTCAGAAAGAGTAAATTAACGTTCATTTTTCTTCTTTGTCATTCCTTATATCATTGGTTACCAATGCGCTCTTTATTTACGTTTCTCTGCTTTATTGACCAGATTTCATCGGGTGAAATCACTAATGGTGGTAACCAATTACCCCCACAATGTCCTATTGGTCCATTGCAATCCTCCGGCACAGTTCTTAGATTACTGTAAAACCCTAAGACGTGAAATCATTGATTCTAATTGCTGTTTCTTCGGTTGCTGAGAAACCATACGGAAGGAAAACAAAATGAGCAGACTAAAAATGTTGAATCTACAACATAGAAAGTTCTTTATGCAAACTACATGCTATACTTTACTCGCTATTCCTAGATCTACCAACAATCAAATCAAATCAGCAATCAAAATCATACCACGGAACAAGCTGCACAGTCCACGACGGATTAAAAGGACATTATTCTGCCCAAACAATGACCGAGAAGATATATAACTGCTACGGCTACATAGAGTGAAAATATCAATGAATATTAGTCCGAGAAACAATC

mRNA sequence

ATGGGCTCGATTGCCGATCATGGGCCGTTTACTGGTCTCACGTTATGGGTCCATGAGGAGAAATTCTGGCCCAAGAAAGCAGGGGCAAAATCGTCAATGGTTCTTCGAGTTCAACGTCATAATCAGCATCCGAGACAGTTTTCACAGAAGCTCAGACATATTTCATCGGGTGAAATCACTAATGGTGGTAACCAATTACCCCCACAATGTCCTATTGGTCCATTGCAATCCTCCGGCACAGTTCTTAGATTACTGTAAAACCCTAAGACGTGAAATCATTGATTCTAATTGCTGTTTCTTCGGTTGCTGAGAAACCATACGGAAGGAAAACAAAATGAGCAGACTAAAAATGTTGAATCTACAACATAGAAAGTTCTTTATGCAAACTACATGCTATACTTTACTCGCTATTCCTAGATCTACCAACAATCAAATCAAATCAGCAATCAAAATCATACCACGGAACAAGCTGCACAGTCCACGACGGATTAAAAGGACATTATTCTGCCCAAACAATGACCGAGAAGATATATAACTGCTACGGCTACATAGAGTGAAAATATCAATGAATATTAGTCCGAGAAACAATC

Coding sequence (CDS)

ATGGGCTCGATTGCCGATCATGGGCCGTTTACTGGTCTCACGTTATGGGTCCATGAGGAGAAATTCTGGCCCAAGAAAGCAGGGGCAAAATCGTCAATGGTTCTTCGAGTTCAACGTCATAATCAGCATCCGAGACAGTTTTCACAGAAGCTCAGACATATTTCATCGGGTGAAATCACTAATGGTGGTAACCAATTACCCCCACAATGTCCTATTGGTCCATTGCAATCCTCCGGCACAGTTCTTAGATTACTGTAA

Protein sequence

MGSIADHGPFTGLTLWVHEEKFWPKKAGAKSSMVLRVQRHNQHPRQFSQKLRHISSGEITNGGNQLPPQCPIGPLQSSGTVLRLL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17204-RACarg17204-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17204Watermelon (97103) v2carwmbB0994
Carg17204Watermelon (97103) v2carwmbB0996
Carg17204Wax gourdcarwgoB1097
Carg17204Wax gourdcarwgoB1092
Carg17204Silver-seed gourdcarcarB125
Carg17204Silver-seed gourdcarcarB167
Carg17204Silver-seed gourdcarcarB647
Carg17204Cucumber (Gy14) v2carcgybB0933
Carg17204Cucumber (Gy14) v2carcgybB0934
Carg17204Cucumber (Gy14) v1carcgyB1064
Carg17204Cucumber (Gy14) v1carcgyB1066
Carg17204Cucurbita maxima (Rimu)carcmaB1291
Carg17204Cucurbita maxima (Rimu)carcmaB1292
Carg17204Cucurbita maxima (Rimu)carcmaB1293
Carg17204Cucurbita maxima (Rimu)carcmaB1294
Carg17204Cucurbita moschata (Rifu)carcmoB1261
Carg17204Cucurbita moschata (Rifu)carcmoB1263
Carg17204Cucurbita moschata (Rifu)carcmoB1265
Carg17204Cucurbita pepo (Zucchini)carcpeB1307
Carg17204Cucurbita pepo (Zucchini)carcpeB1309
Carg17204Cucurbita pepo (Zucchini)carcpeB1310
Carg17204Cucurbita pepo (Zucchini)carcpeB1311
Carg17204Wild cucumber (PI 183967)carcpiB0983
Carg17204Wild cucumber (PI 183967)carcpiB0984
Carg17204Cucumber (Chinese Long) v2carcuB0960
Carg17204Cucumber (Chinese Long) v2carcuB0961
Carg17204Cucumber (Chinese Long) v3carcucB0988
Carg17204Cucumber (Chinese Long) v3carcucB0989
Carg17204Bottle gourd (USVL1VR-Ls)carlsiB864
Carg17204Bottle gourd (USVL1VR-Ls)carlsiB863
Carg17204Melon (DHL92) v3.5.1carmeB0927
Carg17204Melon (DHL92) v3.5.1carmeB0928
Carg17204Melon (DHL92) v3.6.1carmedB0933
Carg17204Melon (DHL92) v3.6.1carmedB0934
Carg17204Watermelon (Charleston Gray)carwcgB0920
Carg17204Watermelon (Charleston Gray)carwcgB0922
Carg17204Watermelon (97103) v1carwmB0944
Carg17204Watermelon (97103) v1carwmB0945