Carg17152 (gene) Silver-seed gourd

Overview
NameCarg17152
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTubby-like F-box protein
LocationCucurbita_argyrosperma_scaffold_110 : 153095 .. 154777 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTTGTGTAGTGAGGCGAATACTGCTATGACGACGCCTCTGAGAGGCATAATTAGCGAGCAGAGTGAAATAAGAGAAGGCAGTGGGAATTCGTCGAGAAAAGTGAGGGAGGGAGTTCAAGTGCGTCATCTCGGGAAGTCGCATATTGTCCCTGAGCAGCCTTCGTCATCTTCTCCGGTTCCGATCGAACAGAGCCGGTGGGCGAATTTGCCGCCCGAGCTTCTATTGGACATAATTCAACGAGTGGAAGCGAGTGAGACCACTTGGCCTTCTCGCCGGCATGTTGTTGCCTGTGCTTCAGTTTGCAGGTCATGGCGGATGATTACAAAGGAAATTGTGAGGACTCCCGAACAGTGTGGGTGGATCACCTTCCCAATTTCCCTGATGCAGGTATTTTAGTTCATCCTTCGTCATTTTCAAGGCAGATTTTGAGCTCCCTAACAACCAGGGCTTTAAATCTGAATCTATTCTTCCTTGTTTTTGACCTAATTTAATAGCCGGGACCAAGAGAAACGCCAATCCAGTGCTTCATTAAAAGAGAAAGGGCAACTTCAACGTTTCGGCTCTATCTCGGCCTAAGCCCTGGTAATTTCCCTTTTTTTTTTTTTCTTTTTCTTTTTTCTATTGAGATTATGCGTCCTTTGAGTAAAATTCTTGTATCTAGAGAATAGATTTTTTTTTTAGAAAAAAAATAAAATAAAATAAACTCCCACCACTTAGAAGTAGCAGTTCTCAAATGGGGGTAGTTATTCACTCCTTTCGGTTTTTCCCCTCCATGATATATATTATATATCTAATCAGCTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCTCTGTCTGGTAATCTAAGTAAACTGCTGCTAACTGCGAAAAGAATCCGACGAGCAATGAGTACTGATTTCATTGTACGAGCAAGCAACAATTTCATTGGAAAATTGAGGTGAGCTATGGCCGCCACAGTTACGTTGGTTGCAGGGTGGTTGCTTTGCTTTTAATTAATGAACTGACATGAAAGTTGATGATGGATCAGGTCAAATTTTCTGGGGACCAAGTTTTCGATTTATGACAGTCAGCCTCCACATGACCCAAAATTGCGAACTAGTAGATCAAAACGAAGAATTCATTTGAAACAGGTTTCTCCAAGTAAAACTCCAACCAACTATAAAGTCGCTGCCGTAAGCTACGAGCTGAATGTCCTCCGCACCAGAGGGCCGAGGAGAATGAGGTGCACAATGCATTCGATACCTGTTGCAGCTGTGGAGGAGGGCGGCACTGCCCCAACTCCAACAGAGTTTAAAGACTGCATCGATGACCATGATTCATCTACGTCGAGTTGCAAAGGAAAGAAGCCGATATGGGAGTCGTCCCCCGAGCCTCTTGAATCGACAGCACCGTTGGTATTGAAGAACAAAGCTCCAAGATGGCACGAGCAGCTGCAGTGTTGGTGCCTGAATTTCAAAGGGCGTGTCACGGTTGCATCTGTGAAGAATTTCCAGCTGGTTGCTGCAGCAGAGACGAGTGAGAATGTGTCTGCAGCTGAACAAGAAAAAGTGATTCTGCAGTTTGGGAAGATTGGGAAGGATATTTTCACGATGGATTATCGCTACCCTCTCTCAGCTTTCCAAGCGTTTGCAATCTGCCTTAGTAGCTTTGATACCAAGCCAGCTTGTGAATGA

mRNA sequence

ATGGCGTCTTTGTGTAGTGAGGCGAATACTGCTATGACGACGCCTCTGAGAGGCATAATTAGCGAGCAGAGTGAAATAAGAGAAGGCAGTGGGAATTCGTCGAGAAAAGTGAGGGAGGGAGTTCAAGTGCGTCATCTCGGGAAGTCGCATATTGTCCCTGAGCAGCCTTCGTCATCTTCTCCGGTTCCGATCGAACAGAGCCGGTGGGCGAATTTGCCGCCCGAGCTTCTATTGGACATAATTCAACGAGTGGAAGCGAGTGAGACCACTTGGCCTTCTCGCCGGCATGTTGTTGCCTGTGCTTCAGTTTGCAGGTCATGGCGGATGATTACAAAGGAAATTGTGAGGACTCCCGAACAGTGTGGGTGGATCACCTTCCCAATTTCCCTGATGCAGCCGGGACCAAGAGAAACGCCAATCCAGTGCTTCATTAAAAGAGAAAGGGCAACTTCAACGTTTCGGCTCTATCTCGGCCTAAGCCCTGCTCTGTCTGGTAATCTAAGTAAACTGCTGCTAACTGCGAAAAGAATCCGACGAGCAATGAGTACTGATTTCATTGTACGAGCAAGCAACAATTTCATTGGAAAATTGAGGTCAAATTTTCTGGGGACCAAGTTTTCGATTTATGACAGTCAGCCTCCACATGACCCAAAATTGCGAACTAGTAGATCAAAACGAAGAATTCATTTGAAACAGGTTTCTCCAAGTAAAACTCCAACCAACTATAAAGTCGCTGCCGTAAGCTACGAGCTGAATGTCCTCCGCACCAGAGGGCCGAGGAGAATGAGGTGCACAATGCATTCGATACCTGTTGCAGCTGTGGAGGAGGGCGGCACTGCCCCAACTCCAACAGAGTTTAAAGACTGCATCGATGACCATGATTCATCTACGTCGAGTTGCAAAGGAAAGAAGCCGATATGGGAGTCGTCCCCCGAGCCTCTTGAATCGACAGCACCGTTGGTATTGAAGAACAAAGCTCCAAGATGGCACGAGCAGCTGCAGTGTTGGTGCCTGAATTTCAAAGGGCGTGTCACGGTTGCATCTGTGAAGAATTTCCAGCTGGTTGCTGCAGCAGAGACGAGTGAGAATGTGTCTGCAGCTGAACAAGAAAAAGTGATTCTGCAGTTTGGGAAGATTGGGAAGGATATTTTCACGATGGATTATCGCTACCCTCTCTCAGCTTTCCAAGCGTTTGCAATCTGCCTTAGTAGCTTTGATACCAAGCCAGCTTGTGAATGA

Coding sequence (CDS)

ATGGCGTCTTTGTGTAGTGAGGCGAATACTGCTATGACGACGCCTCTGAGAGGCATAATTAGCGAGCAGAGTGAAATAAGAGAAGGCAGTGGGAATTCGTCGAGAAAAGTGAGGGAGGGAGTTCAAGTGCGTCATCTCGGGAAGTCGCATATTGTCCCTGAGCAGCCTTCGTCATCTTCTCCGGTTCCGATCGAACAGAGCCGGTGGGCGAATTTGCCGCCCGAGCTTCTATTGGACATAATTCAACGAGTGGAAGCGAGTGAGACCACTTGGCCTTCTCGCCGGCATGTTGTTGCCTGTGCTTCAGTTTGCAGGTCATGGCGGATGATTACAAAGGAAATTGTGAGGACTCCCGAACAGTGTGGGTGGATCACCTTCCCAATTTCCCTGATGCAGCCGGGACCAAGAGAAACGCCAATCCAGTGCTTCATTAAAAGAGAAAGGGCAACTTCAACGTTTCGGCTCTATCTCGGCCTAAGCCCTGCTCTGTCTGGTAATCTAAGTAAACTGCTGCTAACTGCGAAAAGAATCCGACGAGCAATGAGTACTGATTTCATTGTACGAGCAAGCAACAATTTCATTGGAAAATTGAGGTCAAATTTTCTGGGGACCAAGTTTTCGATTTATGACAGTCAGCCTCCACATGACCCAAAATTGCGAACTAGTAGATCAAAACGAAGAATTCATTTGAAACAGGTTTCTCCAAGTAAAACTCCAACCAACTATAAAGTCGCTGCCGTAAGCTACGAGCTGAATGTCCTCCGCACCAGAGGGCCGAGGAGAATGAGGTGCACAATGCATTCGATACCTGTTGCAGCTGTGGAGGAGGGCGGCACTGCCCCAACTCCAACAGAGTTTAAAGACTGCATCGATGACCATGATTCATCTACGTCGAGTTGCAAAGGAAAGAAGCCGATATGGGAGTCGTCCCCCGAGCCTCTTGAATCGACAGCACCGTTGGTATTGAAGAACAAAGCTCCAAGATGGCACGAGCAGCTGCAGTGTTGGTGCCTGAATTTCAAAGGGCGTGTCACGGTTGCATCTGTGAAGAATTTCCAGCTGGTTGCTGCAGCAGAGACGAGTGAGAATGTGTCTGCAGCTGAACAAGAAAAAGTGATTCTGCAGTTTGGGAAGATTGGGAAGGATATTTTCACGATGGATTATCGCTACCCTCTCTCAGCTTTCCAAGCGTTTGCAATCTGCCTTAGTAGCTTTGATACCAAGCCAGCTTGTGAATGA

Protein sequence

MASLCSEANTAMTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWANLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIVRASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Homology
[Close]
BLAST of Carg17152 vs. NCBI nr
Match: XP_022940508.1 (tubby-like F-box protein 5 [Cucurbita moschata])

HSP 1 Score: 794.3 bits (2050), Expect = 2.0e-226
Identity = 399/409 (97.56%), Postives = 400/409 (97.80%), Query Frame = 0 

Query: 12  MTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 71
           MTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN
Sbjct: 1   MTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 60

Query: 72  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLM 131
           LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTP+QCGWITFPISLM
Sbjct: 61  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPDQCGWITFPISLM 120

Query: 132 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV---- 191
           QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMST FIV    
Sbjct: 121 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTYFIVSLLP 180

Query: 192 ----RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 251
               RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK
Sbjct: 181 DDFSRASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 240

Query: 252 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK 311
           VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK
Sbjct: 241 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK 300

Query: 312 KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 371
           KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN
Sbjct: 301 KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 360

Query: 372 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 361 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 409

[Close]
BLAST of Carg17152 vs. NCBI nr
Match: XP_023525022.1 (tubby-like F-box protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793.9 bits (2049), Expect = 2.6e-226
Identity = 398/409 (97.31%), Postives = 399/409 (97.56%), Query Frame = 0 

Query: 12  MTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 71
           MT PLRGIISEQSEIRE SGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN
Sbjct: 1   MTMPLRGIISEQSEIRESSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 60

Query: 72  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLM 131
           LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKE+VRTPEQCGWITFPISLM
Sbjct: 61  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEVVRTPEQCGWITFPISLM 120

Query: 132 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV---- 191
           QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV    
Sbjct: 121 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIVSLLP 180

Query: 192 ----RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 251
               RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK
Sbjct: 181 DDFSRASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 240

Query: 252 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK 311
           VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK
Sbjct: 241 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK 300

Query: 312 KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 371
           KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN
Sbjct: 301 KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 360

Query: 372 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 361 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 409

[Close]
BLAST of Carg17152 vs. NCBI nr
Match: XP_022982036.1 (tubby-like F-box protein 5 [Cucurbita maxima])

HSP 1 Score: 785.0 bits (2026), Expect = 1.2e-223
Identity = 395/409 (96.58%), Postives = 398/409 (97.31%), Query Frame = 0 

Query: 12  MTTPLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 71
           MT P+RGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN
Sbjct: 1   MTMPMRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSSPVPIEQSRWAN 60

Query: 72  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLM 131
           LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKE+VRTPEQCGWITFPISLM
Sbjct: 61  LPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEVVRTPEQCGWITFPISLM 120

Query: 132 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV---- 191
           QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV    
Sbjct: 121 QPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIVSLLP 180

Query: 192 ----RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 251
               RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK
Sbjct: 181 DDFSRASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK 240

Query: 252 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK 311
           VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCID+HDSSTSSCKGK
Sbjct: 241 VAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDEHDSSTSSCKGK 300

Query: 312 KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 371
           KPIWESSPEP ESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLV AAETSEN
Sbjct: 301 KPIWESSPEPHESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLV-AAETSEN 360

Query: 372 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 361 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 408

[Close]
BLAST of Carg17152 vs. NCBI nr
Match: XP_022975527.1 (tubby-like F-box protein 5 [Cucurbita maxima])

HSP 1 Score: 730.3 bits (1884), Expect = 3.6e-207
Identity = 370/407 (90.91%), Postives = 384/407 (94.35%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSS-PVPIEQSRWANLP 74
           PLRGI+ EQSEIREGS NSSRKVREGVQ+RHLGKSHIVPEQPSSSS PVPIEQSRWA+L 
Sbjct: 2   PLRGIVREQSEIREGSENSSRKVREGVQMRHLGKSHIVPEQPSSSSFPVPIEQSRWASLT 61

Query: 75  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 134
           PELLLDIIQRVEASET+WPSRR VVACASVCRSWRMITKE+VRTPEQCGWITFPISL QP
Sbjct: 62  PELLLDIIQRVEASETSWPSRRDVVACASVCRSWRMITKEVVRTPEQCGWITFPISLKQP 121

Query: 135 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 194
           GPR+TPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKR RRAMST+FIV      
Sbjct: 122 GPRDTPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRFRRAMSTEFIVSLVPDD 181

Query: 195 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYKVA 254
             RASNN+IGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNY VA
Sbjct: 182 FSRASNNYIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYTVA 241

Query: 255 AVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKP 314
           AV+YELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCI++H SSTS C+GKKP
Sbjct: 242 AVAYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCINEHHSSTSICEGKKP 301

Query: 315 IWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSENVS 374
           I E SP+P ES APLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA ETSENVS
Sbjct: 302 IIE-SPKPQESMAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVETSENVS 361

Query: 375 AAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           AAEQE+VILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 362 AAEQERVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 407

[Close]
BLAST of Carg17152 vs. NCBI nr
Match: XP_023536320.1 (tubby-like F-box protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 729.2 bits (1881), Expect = 7.9e-207
Identity = 368/407 (90.42%), Postives = 384/407 (94.35%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSSSS-PVPIEQSRWANLP 74
           PLRGI+ EQSEIREGS NSSRKVREGVQ+RHLGKSHIVPEQPSSSS PVPI+QSRWA+LP
Sbjct: 2   PLRGIVREQSEIREGSENSSRKVREGVQMRHLGKSHIVPEQPSSSSFPVPIDQSRWASLP 61

Query: 75  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 134
           PELLLDIIQRVEASET+WPSRR VVACASVCRSWRMITKE+VRTPEQCGWITFPISL QP
Sbjct: 62  PELLLDIIQRVEASETSWPSRRDVVACASVCRSWRMITKEVVRTPEQCGWITFPISLKQP 121

Query: 135 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 194
           GPR+TPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKR RRAMST+FIV      
Sbjct: 122 GPRDTPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRFRRAMSTEFIVSLVPDD 181

Query: 195 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYKVA 254
             RASNN+IGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNY VA
Sbjct: 182 FSRASNNYIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYTVA 241

Query: 255 AVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKP 314
           AV+YELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCI++H SSTS C+GKKP
Sbjct: 242 AVAYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCINEHHSSTSICEGKKP 301

Query: 315 IWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSENVS 374
           I E SP+P ES +PLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA ETSENVS
Sbjct: 302 IIE-SPKPQESMSPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVETSENVS 361

Query: 375 AAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           AAEQE+VILQFGKIGKDIFTMDYRYPLSAF AFAICLSSFDTKPACE
Sbjct: 362 AAEQERVILQFGKIGKDIFTMDYRYPLSAFHAFAICLSSFDTKPACE 407

[Close]
BLAST of Carg17152 vs. TAIR10
Match: AT1G47270.1 (tubby like protein 6)

HSP 1 Score: 453.8 bits (1166), Expect = 1.2e-127
Identity = 239/388 (61.60%), Postives = 289/388 (74.48%), Query Frame = 0 

Query: 47  GKSHIVPEQPSSSSPVP----IEQSRWANLPPELLLDIIQRVEASETTWPSRRHVVACAS 106
           G+SHI PE  S SS +     + QS W +LPPELLLDIIQR+E+ ++ WP RR VVACAS
Sbjct: 43  GRSHIAPEGSSVSSSLSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACAS 102

Query: 107 VCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRETPIQCFIKRERATSTFRLYLGLSPA 166
           VC+SWR +TKE+V+ PE  G ITFPISL QPGPR+ PIQCFIKRERAT  +RLYLGLSPA
Sbjct: 103 VCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPA 162

Query: 167 LSGNLSKLLLTAKRIRRAMSTDFIV--------RASNNFIGKLRSNFLGTKFSIYDSQ-P 226
           LSG+ SKLLL+AKR+RRA   +F+V        R+S+N+IGKLRSNFLGTKF++Y++Q P
Sbjct: 163 LSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP 222

Query: 227 PHDPKLRTSRSKRRIHLKQVSP--SKTPTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPV 286
           P + KL  S         QVSP  S + ++Y +A++ YELNVLRTRGPRRM+C MHSIP+
Sbjct: 223 PFNRKLPPS--------MQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPI 282

Query: 287 AAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIWESSPEPLESTA----PLVLKNKAP 346
           +A++EGG   +PTEF         +    K KKP+ +     L   +    PL+LKNK+P
Sbjct: 283 SAIQEGGKIQSPTEF---------TNQGKKKKKPLMDFCSGNLGGESVIKEPLILKNKSP 342

Query: 347 RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAE---TSENVSAAEQEKVILQFGKIGKDIF 406
           RWHEQLQCWCLNFKGRVTVASVKNFQLVAAA     + N+   EQ++VILQFGKIGKDIF
Sbjct: 343 RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIF 402

Query: 407 TMDYRYPLSAFQAFAICLSSFDTKPACE 413
           TMDYRYP+SAFQAFAICLSSFDTKP CE
Sbjct: 403 TMDYRYPISAFQAFAICLSSFDTKPVCE 413

[Close]
BLAST of Carg17152 vs. TAIR10
Match: AT2G18280.1 (tubby like protein 2)

HSP 1 Score: 422.2 bits (1084), Expect = 3.8e-118
Identity = 241/413 (58.35%), Postives = 293/413 (70.94%), Query Frame = 0 

Query: 16  LRGIISEQSEIREGSGNSSRKVREGVQVRHLGK-SHIVPEQPSSSSPVP-IEQSRWANLP 75
           L+ I+ +  E+R+G G        G+  R   K SHI P+Q  ++ P+  I QS WA+LP
Sbjct: 3   LKSILRDLKEVRDGLG--------GISKRSWSKSSHIAPDQ--TTPPLDNIPQSPWASLP 62

Query: 76  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 135
           PELL DII RVE SET WP+R  VV+CASVC+SWR IT EIVR PEQCG +TFPISL QP
Sbjct: 63  PELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQP 122

Query: 136 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 195
           GPR++PIQCFIKR RAT+T+ LY GL P+ + N  KLLL A+RIRRA  TDFI+      
Sbjct: 123 GPRDSPIQCFIKRNRATATYILYYGLMPSETEN-DKLLLAARRIRRATCTDFIISLSAKN 182

Query: 196 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK-V 255
             R+S+ ++GKLRS FLGTKF+IYD+Q         ++  RR+H KQ +P K PTN   V
Sbjct: 183 FSRSSSTYVGKLRSGFLGTKFTIYDNQTA--SSTAQAQPNRRLHPKQAAP-KLPTNSSTV 242

Query: 256 AAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK- 315
             ++YELNVLRTRGPRRM C M SIP+++V        P+  +  I++  SS+ S KG+ 
Sbjct: 243 GNITYELNVLRTRGPRRMHCAMDSIPLSSV-----IAEPSVVQG-IEEEVSSSPSPKGET 302

Query: 316 ----KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAE 375
               K I ++SP   +   PLVLKNK+PRWHEQLQCWCLNFKGRVTVASVKNFQLVA  +
Sbjct: 303 ITTDKEIPDNSPSLRDQ--PLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEID 362

Query: 376 TSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
            S +    E E+VILQFGKIGKDIFTMDYRYPLSAFQAFAIC+SSFDTKPACE
Sbjct: 363 ASLDAPPEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393

[Close]
BLAST of Carg17152 vs. TAIR10
Match: AT1G25280.1 (tubby like protein 10)

HSP 1 Score: 411.4 bits (1056), Expect = 6.7e-115
Identity = 233/445 (52.36%), Postives = 293/445 (65.84%), Query Frame = 0 

Query: 17  RGIISEQSEIREGSGNSSRKVRE-GVQVRHLGKSHIVPEQPSSS-----SPVPIEQSRWA 76
           RGI+    ++R+G G+ SR+  +  +   H GK+     +  SS     SPV ++ SRWA
Sbjct: 4   RGIV---QDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 63

Query: 77  NLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISL 136
           NLPPELL D+I+R+E SE+ WP+R+HVVACASVCRSWR + +EIV  PE CG +TFP+SL
Sbjct: 64  NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 123

Query: 137 MQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV--- 196
            QPGPR+  IQCFIKR+++  TF L+L LSPAL     K LL+AKR RR   T++I+   
Sbjct: 124 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 183

Query: 197 -----RASNNFIGKLRSNFLGTKFSIYDSQPPHDPK---LRTSRSKR-RIHLKQVSPSKT 256
                R+SN+++GKLRSNFLGTKF +YD+QPP +     L T R+ R R H ++VSP   
Sbjct: 184 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 243

Query: 257 PTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTE------------- 316
             +Y +A ++YELNVL TRGPRRM C M+SIP++++E GG+ P   E             
Sbjct: 244 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 303

Query: 317 -----FKDCIDDHDS--STSSCKGKKPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCL 376
                F     DH S   +SS   +  I     E   S  PL+LKNK PRWHEQLQCWCL
Sbjct: 304 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCL 363

Query: 377 NFKGRVTVASVKNFQLVAAAETSENVSAA-----------EQEKVILQFGKIGKDIFTMD 413
           NF+GRVTVASVKNFQLVAA +     + A           EQ+KVILQFGK+GKD+FTMD
Sbjct: 364 NFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMD 423

[Close]
BLAST of Carg17152 vs. TAIR10
Match: AT2G47900.3 (tubby like protein 3)

HSP 1 Score: 407.1 bits (1045), Expect = 1.3e-113
Identity = 229/409 (55.99%), Postives = 276/409 (67.48%), Query Frame = 0 

Query: 20  ISEQSEIREGSGNSSRKVREGVQVRH-LGKSHIVPEQPSSSSPV-PIEQSRWANLPPELL 79
           +S +S I++  G      R+G  VR   G+S        +S PV   +QS WA++PPELL
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQDTSVPVDAFKQSCWASMPPELL 60

Query: 80  LDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRE 139
            D++ R+E SE TWPSR++VV+CA VCR+WR I KEIVR PE    +TFPISL QPGPR 
Sbjct: 61  RDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRG 120

Query: 140 TPIQCFIKRERATSTFRLYLGLSPALSGN-LSKLLLTAKRIRRAMSTDFIV--------R 199
           + +QC+I R R+  T+ LYLGL+ A + N   K LL AKR RR   TD+I+        R
Sbjct: 121 SLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSR 180

Query: 200 ASNNFIGKLRSNFLGTKFSIYDSQPPH-DPKLRTSRSKRRIHLKQVSPSKTPTNYKVAAV 259
            SN +IGKLRSNFLGTKF++YD+QP +   ++  +RS R + LKQVSP     NY VA +
Sbjct: 181 GSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHI 240

Query: 260 SYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIW 319
           SYELNVL +RGPRRM+C M +IP +AVE GGTAPT TE      D   S S  + K    
Sbjct: 241 SYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRA 300

Query: 320 ESSPEPLESTAP----LVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 379
           ES P    S A     LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAA E    
Sbjct: 301 ESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGP- 360

Query: 380 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
            +  E E VILQFGK+GKD+FTMDY+YP+SAFQAF ICLSSFDTK ACE
Sbjct: 361 -AGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407

[Close]
BLAST of Carg17152 vs. TAIR10
Match: AT1G76900.1 (tubby like protein 1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.2e-109
Identity = 220/447 (49.22%), Postives = 284/447 (63.53%), Query Frame = 0 

Query: 25  EIREGSGNSSRK---VREGVQVRHLGKSH-IVPEQPSSSSPVPIEQSRWANLPPELLLDI 84
           ++R+  G+ SR+    +     +  GKS   V +       V I+++ WANLPPELL D+
Sbjct: 9   DVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANLPPELLRDV 68

Query: 85  IQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRETPI 144
           I+R+E SE+ WP+RRHVVACASVCRSWR + KEIV++PE  G ITFP+SL QPGPR+  +
Sbjct: 69  IKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATM 128

Query: 145 QCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV--------RASNN 204
           QCFIKR+++  T+ LYL LSPAL     K LL+AKRIRR   T++++        R+SN 
Sbjct: 129 QCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNT 188

Query: 205 FIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRS----KRRIHLKQVSPSKTPTNYKVAAVS 264
           +IGK+RSNFLGTKF IYD+QP ++  +  +       RR + K+VSP     +YK+A VS
Sbjct: 189 YIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSGSYKIAQVS 248

Query: 265 YELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEF---KDCIDDHDSSTSSCKGKK- 324
           YELNVL TRGPRRM C M+SIP +++ EGGT P   +    +  +D+   S +S   +K 
Sbjct: 249 YELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRKI 308

Query: 325 ------------------PIWESSPEPLE-----STAPLVLKNKAPRWHEQLQCWCLNFK 384
                             P+ E     LE     ++ PLVLKNK PRWHEQLQCWCLNF+
Sbjct: 309 TYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLNFR 368

Query: 385 GRVTVASVKNFQLVAAAE----------------TSENVSAAEQEKVILQFGKIGKDIFT 413
           GRVTVASVKNFQL+AA +                          +K+ILQFGK+GKD+FT
Sbjct: 369 GRVTVASVKNFQLIAANQPXXXXXXXXXXXXXXXXXXXXQTDGPDKIILQFGKVGKDMFT 428

[Close]
BLAST of Carg17152 vs. Swiss-Prot
Match: sp|Q6Z2G9|TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP5 PE=2 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.3e-133
Identity = 249/426 (58.45%), Postives = 297/426 (69.72%), Query Frame = 0 

Query: 16  LRGIISEQSEIREGSGNSSRKVREG------VQVRH------LGKSHIVPEQPSSSSPVP 75
           L+ I+ E  E+R+G G+ SR+  +G         RH                        
Sbjct: 3   LKSIVRELREMRDGIGSMSRRAADGRAGGXXXXSRHSWPVLWXXXXXXXXXXXXXXXXXX 62

Query: 76  IEQSRWANLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGW 135
               RWANLPPELLLD+IQRVEASE TWP+RR VVACA+VCRSWR +TKE+V+T E+CG 
Sbjct: 63  XXXGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGR 122

Query: 136 ITFPISLMQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMST 195
           ITFPISL QPGPRE P+QCF++R+RATST+ LYLGLSP+L G   KLLL A++IRRA  T
Sbjct: 123 ITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRT 182

Query: 196 DFIVR--------ASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSP 255
            F++         +S+ ++GKL+ NFLGTKF+I+DSQPP D  +  +    + H KQVSP
Sbjct: 183 SFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPCDAVVLPNNRPSKRHFKQVSP 242

Query: 256 SKTPTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDS 315
                NY VA VSYEL VLR RGPRRM+CTMHSIP   ++EGG APTPT     +D+   
Sbjct: 243 RLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAPTPTGIIHSLDEQVP 302

Query: 316 STSSCKGKKPIWESSPEPLE---------STAPLVLKNKAPRWHEQLQCWCLNFKGRVTV 375
           + S+ KGK+P  E S   L          +  PLVLKNKAPRWHEQLQCWCLNF+GRVTV
Sbjct: 303 ALSTSKGKEPAIEFSSTSLSADLSGPVCTNEVPLVLKNKAPRWHEQLQCWCLNFRGRVTV 362

Query: 376 ASVKNFQLVAAAETSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFD 413
           ASVKNFQLVA+ + S  + AAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICL+SFD
Sbjct: 363 ASVKNFQLVASVDPSLGIPAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLTSFD 422

[Close]
BLAST of Carg17152 vs. Swiss-Prot
Match: sp|Q0WPY0|TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana OX=3702 GN=TULP6 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-126
Identity = 239/388 (61.60%), Postives = 289/388 (74.48%), Query Frame = 0 

Query: 47  GKSHIVPEQPSSSSPVP----IEQSRWANLPPELLLDIIQRVEASETTWPSRRHVVACAS 106
           G+SHI PE  S SS +     + QS W +LPPELLLDIIQR+E+ ++ WP RR VVACAS
Sbjct: 43  GRSHIAPEGSSVSSSLSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACAS 102

Query: 107 VCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRETPIQCFIKRERATSTFRLYLGLSPA 166
           VC+SWR +TKE+V+ PE  G ITFPISL QPGPR+ PIQCFIKRERAT  +RLYLGLSPA
Sbjct: 103 VCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPA 162

Query: 167 LSGNLSKLLLTAKRIRRAMSTDFIV--------RASNNFIGKLRSNFLGTKFSIYDSQ-P 226
           LSG+ SKLLL+AKR+RRA   +F+V        R+S+N+IGKLRSNFLGTKF++Y++Q P
Sbjct: 163 LSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP 222

Query: 227 PHDPKLRTSRSKRRIHLKQVSP--SKTPTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPV 286
           P + KL  S         QVSP  S + ++Y +A++ YELNVLRTRGPRRM+C MHSIP+
Sbjct: 223 PFNRKLPPS--------MQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPI 282

Query: 287 AAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIWESSPEPLESTA----PLVLKNKAP 346
           +A++EGG   +PTEF         +    K KKP+ +     L   +    PL+LKNK+P
Sbjct: 283 SAIQEGGKIQSPTEF---------TNQGKKKKKPLMDFCSGNLGGESVIKEPLILKNKSP 342

Query: 347 RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAE---TSENVSAAEQEKVILQFGKIGKDIF 406
           RWHEQLQCWCLNFKGRVTVASVKNFQLVAAA     + N+   EQ++VILQFGKIGKDIF
Sbjct: 343 RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIF 402

Query: 407 TMDYRYPLSAFQAFAICLSSFDTKPACE 413
           TMDYRYP+SAFQAFAICLSSFDTKP CE
Sbjct: 403 TMDYRYPISAFQAFAICLSSFDTKPVCE 413

[Close]
BLAST of Carg17152 vs. Swiss-Prot
Match: sp|Q8GVE5|TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=TULP2 PE=2 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 6.8e-117
Identity = 241/413 (58.35%), Postives = 293/413 (70.94%), Query Frame = 0 

Query: 16  LRGIISEQSEIREGSGNSSRKVREGVQVRHLGK-SHIVPEQPSSSSPVP-IEQSRWANLP 75
           L+ I+ +  E+R+G G        G+  R   K SHI P+Q  ++ P+  I QS WA+LP
Sbjct: 3   LKSILRDLKEVRDGLG--------GISKRSWSKSSHIAPDQ--TTPPLDNIPQSPWASLP 62

Query: 76  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 135
           PELL DII RVE SET WP+R  VV+CASVC+SWR IT EIVR PEQCG +TFPISL QP
Sbjct: 63  PELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQP 122

Query: 136 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 195
           GPR++PIQCFIKR RAT+T+ LY GL P+ + N  KLLL A+RIRRA  TDFI+      
Sbjct: 123 GPRDSPIQCFIKRNRATATYILYYGLMPSETEN-DKLLLAARRIRRATCTDFIISLSAKN 182

Query: 196 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYK-V 255
             R+S+ ++GKLRS FLGTKF+IYD+Q         ++  RR+H KQ +P K PTN   V
Sbjct: 183 FSRSSSTYVGKLRSGFLGTKFTIYDNQTA--SSTAQAQPNRRLHPKQAAP-KLPTNSSTV 242

Query: 256 AAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGK- 315
             ++YELNVLRTRGPRRM C M SIP+++V        P+  +  I++  SS+ S KG+ 
Sbjct: 243 GNITYELNVLRTRGPRRMHCAMDSIPLSSV-----IAEPSVVQG-IEEEVSSSPSPKGET 302

Query: 316 ----KPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAE 375
               K I ++SP   +   PLVLKNK+PRWHEQLQCWCLNFKGRVTVASVKNFQLVA  +
Sbjct: 303 ITTDKEIPDNSPSLRDQ--PLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEID 362

Query: 376 TSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
            S +    E E+VILQFGKIGKDIFTMDYRYPLSAFQAFAIC+SSFDTKPACE
Sbjct: 363 ASLDAPPEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393

[Close]
BLAST of Carg17152 vs. Swiss-Prot
Match: sp|Q9FRH7|TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana OX=3702 GN=TULP10 PE=1 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.2e-113
Identity = 233/445 (52.36%), Postives = 293/445 (65.84%), Query Frame = 0 

Query: 17  RGIISEQSEIREGSGNSSRKVRE-GVQVRHLGKSHIVPEQPSSS-----SPVPIEQSRWA 76
           RGI+    ++R+G G+ SR+  +  +   H GK+     +  SS     SPV ++ SRWA
Sbjct: 4   RGIV---QDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 63

Query: 77  NLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISL 136
           NLPPELL D+I+R+E SE+ WP+R+HVVACASVCRSWR + +EIV  PE CG +TFP+SL
Sbjct: 64  NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 123

Query: 137 MQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV--- 196
            QPGPR+  IQCFIKR+++  TF L+L LSPAL     K LL+AKR RR   T++I+   
Sbjct: 124 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 183

Query: 197 -----RASNNFIGKLRSNFLGTKFSIYDSQPPHDPK---LRTSRSKR-RIHLKQVSPSKT 256
                R+SN+++GKLRSNFLGTKF +YD+QPP +     L T R+ R R H ++VSP   
Sbjct: 184 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 243

Query: 257 PTNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTE------------- 316
             +Y +A ++YELNVL TRGPRRM C M+SIP++++E GG+ P   E             
Sbjct: 244 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 303

Query: 317 -----FKDCIDDHDS--STSSCKGKKPIWESSPEPLESTAPLVLKNKAPRWHEQLQCWCL 376
                F     DH S   +SS   +  I     E   S  PL+LKNK PRWHEQLQCWCL
Sbjct: 304 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCL 363

Query: 377 NFKGRVTVASVKNFQLVAAAETSENVSAA-----------EQEKVILQFGKIGKDIFTMD 413
           NF+GRVTVASVKNFQLVAA +     + A           EQ+KVILQFGK+GKD+FTMD
Sbjct: 364 NFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMD 423

[Close]
BLAST of Carg17152 vs. Swiss-Prot
Match: sp|Q8VY21|TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.6e-113
Identity = 229/408 (56.13%), Postives = 276/408 (67.65%), Query Frame = 0 

Query: 20  ISEQSEIREGSGNSSRKVREGVQVRH-LGKSHIVPEQPSSSSPV-PIEQSRWANLPPELL 79
           +S +S I++  G      R+G  VR   G+S        +S PV   +QS WA++PPELL
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQDTSVPVDAFKQSCWASMPPELL 60

Query: 80  LDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRE 139
            D++ R+E SE TWPSR++VV+CA VCR+WR I KEIVR PE    +TFPISL QPGPR 
Sbjct: 61  RDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRG 120

Query: 140 TPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV--------RA 199
           + +QC+I R R+  T+ LYLGL+ A S +  K LL AKR RR   TD+I+        R 
Sbjct: 121 SLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRG 180

Query: 200 SNNFIGKLRSNFLGTKFSIYDSQPPH-DPKLRTSRSKRRIHLKQVSPSKTPTNYKVAAVS 259
           SN +IGKLRSNFLGTKF++YD+QP +   ++  +RS R + LKQVSP     NY VA +S
Sbjct: 181 SNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHIS 240

Query: 260 YELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIWE 319
           YELNVL +RGPRRM+C M +IP +AVE GGTAPT TE      D   S S  + K    E
Sbjct: 241 YELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKSIRAE 300

Query: 320 SSPEPLESTAP----LVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSENV 379
           S P    S A     LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAA E     
Sbjct: 301 SLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGP-- 360

Query: 380 SAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           +  E E VILQFGK+GKD+FTMDY+YP+SAFQAF ICLSSFDTK ACE
Sbjct: 361 AGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]
BLAST of Carg17152 vs. TrEMBL
Match: tr|A0A0A0LG52|A0A0A0LG52_CUCSA (Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G859660 PE=3 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 4.2e-204
Identity = 362/410 (88.29%), Postives = 382/410 (93.17%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQP-SSSSPVPIEQSRWANLP 74
           PLRGII E++EIRE SGNSSRKVREGVQ+RHLGKSHIVPEQP SSSSPVP+EQSRWANLP
Sbjct: 2   PLRGIIGEKTEIRESSGNSSRKVREGVQMRHLGKSHIVPEQPSSSSSPVPVEQSRWANLP 61

Query: 75  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 134
           PELLLD+IQRVEASET+WPSRR VVACASVCRSWRMITKE+VRTPEQCGWITFPISL QP
Sbjct: 62  PELLLDVIQRVEASETSWPSRRDVVACASVCRSWRMITKEVVRTPEQCGWITFPISLKQP 121

Query: 135 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 194
           GPR+TPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMST+F +      
Sbjct: 122 GPRDTPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTEFSISLVPDD 181

Query: 195 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYKVA 254
             RASNN++GKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTP NYKVA
Sbjct: 182 FSRASNNYLGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPANYKVA 241

Query: 255 AVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKP 314
           AV+YELNVLRTRGPRRMRCTMHSIP+A+VEEGGTAPTPTEFKDCID++  ST   KGKK 
Sbjct: 242 AVAYELNVLRTRGPRRMRCTMHSIPIASVEEGGTAPTPTEFKDCIDEYHPSTPLLKGKKA 301

Query: 315 IWES---SPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSE 374
           I ES   SP+  ES APLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETS+
Sbjct: 302 ITESPTESPDSQESVAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSQ 361

Query: 375 NVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           NVSAAEQE+VILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 362 NVSAAEQERVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 411

[Close]
BLAST of Carg17152 vs. TrEMBL
Match: tr|A0A1S3CRJ8|A0A1S3CRJ8_CUCME (Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103503931 PE=3 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 7.9e-203
Identity = 359/410 (87.56%), Postives = 383/410 (93.41%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSS-SSPVPIEQSRWANLP 74
           PLRGII E++EIRE SGNSSRKVREGVQ+RHLGKSHIVPEQPSS SSPVP+EQSRWAN P
Sbjct: 2   PLRGIICEKTEIRESSGNSSRKVREGVQMRHLGKSHIVPEQPSSLSSPVPVEQSRWANFP 61

Query: 75  PELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQP 134
           PELLLD+IQRVEASET+WPSRR VVACASVCRSWRMITKE+VRTPEQ GWITFPISL QP
Sbjct: 62  PELLLDVIQRVEASETSWPSRRDVVACASVCRSWRMITKEVVRTPEQSGWITFPISLKQP 121

Query: 135 GPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV------ 194
           GPR+TPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMST+FI+      
Sbjct: 122 GPRDTPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTEFIISLIPDD 181

Query: 195 --RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSKTPTNYKVA 254
             RASNN++GKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPS+TPTNYKVA
Sbjct: 182 FSRASNNYLGKLRSNFLGTKFSIYDSQPPHDPKLRTSRSKRRIHLKQVSPSRTPTNYKVA 241

Query: 255 AVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKP 314
           AV+YELNVLRTRGPRRMRCTMHSIP+A+VEEGGTAPTPTEFKDCI+++ SST   KGKK 
Sbjct: 242 AVAYELNVLRTRGPRRMRCTMHSIPIASVEEGGTAPTPTEFKDCINEYHSSTPLSKGKKA 301

Query: 315 IWES---SPEPLESTAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSE 374
           I ES   SP+  ES APL+LKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAET++
Sbjct: 302 ITESPTESPDSQESVAPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETNQ 361

Query: 375 NVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           NVSAAEQE+VILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 362 NVSAAEQERVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 411

[Close]
BLAST of Carg17152 vs. TrEMBL
Match: tr|A0A2P5AWH4|A0A2P5AWH4_PARAD (Tubby-like F-box protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_294050 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 8.2e-160
Identity = 294/423 (69.50%), Postives = 340/423 (80.38%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSS------SSPVPIEQSR 74
           P + I+ E  E+REG GN SR+   G       KSHI PE  SS      SS   I+QSR
Sbjct: 2   PFKTIVRELREMREGIGNISRRGVVGKNSHRRTKSHIAPEGSSSTLLSCWSSSALIQQSR 61

Query: 75  WANLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPI 134
           WANLPPELL+DIIQRVEASET+WP+RR VVACASVCRSWR ITKE+V+TPEQCGW+TFPI
Sbjct: 62  WANLPPELLVDIIQRVEASETSWPARRDVVACASVCRSWREITKEVVKTPEQCGWLTFPI 121

Query: 135 SLMQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV- 194
           SL QPGPRETPIQCFIKRERATST+RLYLGL+PAL+G++SKLLL A++IRRA ST+F+V 
Sbjct: 122 SLKQPGPRETPIQCFIKRERATSTYRLYLGLTPALAGDMSKLLLAARKIRRATSTEFLVS 181

Query: 195 -------RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLR-TSRSKRRIHLKQVSPSKTP 254
                  R SN++IGKLRSNFLGTKF+IYDSQPP DP ++  S+S+RRIH KQVSP    
Sbjct: 182 LATDDFSRTSNSYIGKLRSNFLGTKFTIYDSQPPGDPVIQMNSKSRRRIHSKQVSPRVPA 241

Query: 255 TNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSST-- 314
            NY +A +SYELNVLRTRGPRRM+CTM +IP+++++EGG APTP EF +C+D+  SS+  
Sbjct: 242 GNYNIATISYELNVLRTRGPRRMQCTMETIPISSIQEGGVAPTPMEFTNCLDEQCSSSPL 301

Query: 315 SSCKGKKPIWESSPEPLESTA--------PLVLKNKAPRWHEQLQCWCLNFKGRVTVASV 374
           S+  GKKP+ E S   L  +         PL+LKNKAPRWHEQLQCWCLNFKGRVTVASV
Sbjct: 302 SASNGKKPLVELSSTNLADSMELVHCTRDPLILKNKAPRWHEQLQCWCLNFKGRVTVASV 361

Query: 375 KNFQLVAAAETSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP 413
           KNFQLVAAAE  +NVSAAEQ+KVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP
Sbjct: 362 KNFQLVAAAEPCQNVSAAEQDKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP 421

[Close]
BLAST of Carg17152 vs. TrEMBL
Match: tr|A0A2P5F6L3|A0A2P5F6L3_9ROSA (Tubby-like F-box protein OS=Trema orientalis OX=63057 GN=TorRG33x02_107120 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.2e-158
Identity = 293/423 (69.27%), Postives = 339/423 (80.14%), Query Frame = 0 

Query: 15  PLRGIISEQSEIREGSGNSSRKVREGVQVRHLGKSHIVPEQPSS------SSPVPIEQSR 74
           P + I+ E  E+REG GN SR+   G       KSHI PE  SS      SS   I+QSR
Sbjct: 2   PFKTIVRELRELREGIGNISRRGVVGKNSHRRTKSHIAPEGSSSTLLSCWSSSALIQQSR 61

Query: 75  WANLPPELLLDIIQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPI 134
           WANLPPELL+DIIQRVEAS+T+WP+RR VVACASVCRSWR ITKE+V+TPEQCGW+TFPI
Sbjct: 62  WANLPPELLVDIIQRVEASQTSWPARRDVVACASVCRSWREITKEVVQTPEQCGWLTFPI 121

Query: 135 SLMQPGPRETPIQCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV- 194
           SL QPGPRETPIQCFIKRER TST+RLYLGL+PAL+G+ SKLLL A++IRRA ST+F+V 
Sbjct: 122 SLKQPGPRETPIQCFIKRERGTSTYRLYLGLTPALAGDKSKLLLAARKIRRATSTEFLVS 181

Query: 195 -------RASNNFIGKLRSNFLGTKFSIYDSQPPHDPKLR-TSRSKRRIHLKQVSPSKTP 254
                  R SN++IGKLRSNFLGTKF+IYDSQPP DP ++  S+S+RRIH KQVSP    
Sbjct: 182 LATDDFSRTSNSYIGKLRSNFLGTKFTIYDSQPPVDPVVQMNSKSRRRIHSKQVSPRVPA 241

Query: 255 TNYKVAAVSYELNVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSST-- 314
            NY +A +SYELNVLRTRGPRRM+CTM +IP+++++EGG APTPTEF +C+++  SS+  
Sbjct: 242 GNYHIATISYELNVLRTRGPRRMQCTMETIPISSIQEGGIAPTPTEFTNCLEEQCSSSPL 301

Query: 315 SSCKGKKPIWESSPEPLESTA--------PLVLKNKAPRWHEQLQCWCLNFKGRVTVASV 374
           S+  GKKP+ E S   L  +         PL+LKNKAPRWHEQLQCWCLNFKGRVTVASV
Sbjct: 302 SASNGKKPLVELSSTNLADSMELVHCTRDPLILKNKAPRWHEQLQCWCLNFKGRVTVASV 361

Query: 375 KNFQLVAAAETSENVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP 413
           KNFQLVAAAE  +NVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP
Sbjct: 362 KNFQLVAAAEPCQNVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKP 421

[Close]
BLAST of Carg17152 vs. TrEMBL
Match: tr|A0A1Q3CA77|A0A1Q3CA77_CEPFO (Tubby-like F-box protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20596 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.8e-154
Identity = 289/409 (70.66%), Postives = 332/409 (81.17%), Query Frame = 0 

Query: 25  EIREGSGN-SSRKVREGVQVRHLGKSHIVPEQPSS-SSPVPI--EQSRWANLPPELLLDI 84
           EIR+G G+ S R+  EG Q+R  G+SHI PE  +S SSP  +  E+S+WANLPPELL D+
Sbjct: 9   EIRDGMGSISRRRSSEGKQMRRRGRSHIAPEGSASFSSPALVFEEESQWANLPPELLHDV 68

Query: 85  IQRVEASETTWPSRRHVVACASVCRSWRMITKEIVRTPEQCGWITFPISLMQPGPRETPI 144
           I R+EASET+WP+RR VVACASVC+SWR I K+IV+TPEQCG +TFPISL QPGPR+ PI
Sbjct: 69  IHRIEASETSWPARRDVVACASVCKSWREIMKQIVKTPEQCGLLTFPISLKQPGPRDGPI 128

Query: 145 QCFIKRERATSTFRLYLGLSPALSGNLSKLLLTAKRIRRAMSTDFIV--------RASNN 204
           QCFI+RERATST+RLYLGLSPALSG+ SKLLL A++IRRA STDF++        R+SN 
Sbjct: 129 QCFIRRERATSTYRLYLGLSPALSGDRSKLLLAARKIRRATSTDFLISLVDDDFSRSSNT 188

Query: 205 FIGKLRSNFLGTKFSIYDSQPPHDPKLRTS-RSKRRIHLKQVSPSKTPTNYKVAAVSYEL 264
           ++GKLRSNFLGTKF+IYDSQPPHD   ++S R  R+IH +++SP     NY VA +SYEL
Sbjct: 189 YVGKLRSNFLGTKFTIYDSQPPHDSATQSSGRPHRKIHSRRISPRIPAVNYNVATISYEL 248

Query: 265 NVLRTRGPRRMRCTMHSIPVAAVEEGGTAPTPTEFKDCIDDHDSSTSSCKGKKPIWESSP 324
           NVLRTRGPRRM+CTM +IP +AV+EGGTAPTP EF + IDD  SS S  KGKKP+ E S 
Sbjct: 249 NVLRTRGPRRMQCTMQTIPFSAVQEGGTAPTPLEFANHIDDQFSSMSVSKGKKPLIEFSS 308

Query: 325 ----EPLE----STAPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAETSEN 384
               EPLE    S  PLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA E S+N
Sbjct: 309 TSLMEPLESIESSNNPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVEPSQN 368

Query: 385 VSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 413
           V  AEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 369 VPVAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 417

The following BLAST results are available for this feature:
BLAST of Carg17152 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940508.12.0e-22697.56tubby-like F-box protein 5 [Cucurbita moschata][more]
XP_023525022.12.6e-22697.31tubby-like F-box protein 5 [Cucurbita pepo subsp. pepo][more]
XP_022982036.11.2e-22396.58tubby-like F-box protein 5 [Cucurbita maxima][more]
XP_022975527.13.6e-20790.91tubby-like F-box protein 5 [Cucurbita maxima][more]
XP_023536320.17.9e-20790.42tubby-like F-box protein 5 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg17152 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47270.11.2e-12761.60tubby like protein 6[more]
AT2G18280.13.8e-11858.35tubby like protein 2[more]
AT1G25280.16.7e-11552.36tubby like protein 10[more]
AT2G47900.31.3e-11355.99tubby like protein 3[more]
AT1G76900.13.2e-10949.22tubby like protein 1[more]
BLAST of Carg17152 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6Z2G9|TLP5_ORYSJ2.3e-13358.45Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP5 PE=... [more]
sp|Q0WPY0|TLP6_ARATH2.1e-12661.60Tubby-like F-box protein 6 OS=Arabidopsis thaliana OX=3702 GN=TULP6 PE=2 SV=1[more]
sp|Q8GVE5|TLP2_ARATH6.8e-11758.35Tubby-like F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=TULP2 PE=2 SV=1[more]
sp|Q9FRH7|TLP10_ARATH1.2e-11352.36Tubby-like F-box protein 10 OS=Arabidopsis thaliana OX=3702 GN=TULP10 PE=1 SV=1[more]
sp|Q8VY21|TLP3_ARATH1.6e-11356.13Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1[more]
BLAST of Carg17152 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LG52|A0A0A0LG52_CUCSA4.2e-20488.29Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G859660 PE=3 SV=1[more]
tr|A0A1S3CRJ8|A0A1S3CRJ8_CUCME7.9e-20387.56Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103503931 PE=3 SV=1[more]
tr|A0A2P5AWH4|A0A2P5AWH4_PARAD8.2e-16069.50Tubby-like F-box protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_294050 P... [more]
tr|A0A2P5F6L3|A0A2P5F6L3_9ROSA1.2e-15869.27Tubby-like F-box protein OS=Trema orientalis OX=63057 GN=TorRG33x02_107120 PE=3 ... [more]
tr|A0A1Q3CA77|A0A1Q3CA77_CEPFO1.8e-15470.66Tubby-like F-box protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20596 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR018066Tubby_C_CS
IPR025659Tubby-like_C
IPR001810F-box_dom
IPR000007Tubby_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17152-RACarg17152-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 340..356
score: 82.62
coord: 193..217
score: 56.91
coord: 322..339
score: 66.92
coord: 369..388
score: 60.0
coord: 390..412
score: 82.61
coord: 241..268
score: 53.41
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 132..407
e-value: 3.2E-85
score: 285.5
IPR001810F-box domainPFAMPF00646F-boxcoord: 68..121
e-value: 1.3E-10
score: 40.8
IPR025659Tubby-like, C-terminalGENE3DG3DSA:3.20.90.10coord: 126..412
e-value: 5.4E-87
score: 293.4
IPR025659Tubby-like, C-terminalSUPERFAMILYSSF54518Tubby C-terminal domain-likecoord: 118..412
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 69..113
e-value: 8.8E-6
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..45
NoneNo IPR availablePANTHERPTHR16517:SF75TUBBY-LIKE F-BOX PROTEIN 6coord: 16..412
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 16..412
IPR018066Tubby, C-terminal, conserved sitePROSITEPS01200TUB_1coord: 340..353
IPR018066Tubby, C-terminal, conserved sitePROSITEPS01201TUB_2coord: 397..412
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 65..126

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17152Cla020778Watermelon (97103) v1carwmB0945
Carg17152Cla014217Watermelon (97103) v1carwmB0947
Carg17152Csa6G502740Cucumber (Chinese Long) v2carcuB0962
Carg17152Csa3G859660Cucumber (Chinese Long) v2carcuB0961
Carg17152MELO3C007834Melon (DHL92) v3.5.1carmeB0929
Carg17152MELO3C003818Melon (DHL92) v3.5.1carmeB0928
Carg17152ClCG05G018850Watermelon (Charleston Gray)carwcgB0920
Carg17152ClCG01G019650Watermelon (Charleston Gray)carwcgB0919
Carg17152CSPI03G42860Wild cucumber (PI 183967)carcpiB0984
Carg17152CSPI06G31050Wild cucumber (PI 183967)carcpiB0985
Carg17152Cucsa.342520Cucumber (Gy14) v1carcgyB1066
Carg17152Cucsa.127500Cucumber (Gy14) v1carcgyB1063
Carg17152CmaCh09G001480Cucurbita maxima (Rimu)carcmaB1291
Carg17152CmaCh01G019160Cucurbita maxima (Rimu)carcmaB1293
Carg17152CmaCh07G004810Cucurbita maxima (Rimu)carcmaB1295
Carg17152CmoCh09G001460Cucurbita moschata (Rifu)carcmoB1261
Carg17152CmoCh07G004800Cucurbita moschata (Rifu)carcmoB1266
Carg17152CmoCh01G019790Cucurbita moschata (Rifu)carcmoB1263
Carg17152Lsi01G006690Bottle gourd (USVL1VR-Ls)carlsiB862
Carg17152Lsi04G016860Bottle gourd (USVL1VR-Ls)carlsiB863
Carg17152Cp4.1LG06g01020Cucurbita pepo (Zucchini)carcpeB1310
Carg17152Cp4.1LG02g07590Cucurbita pepo (Zucchini)carcpeB1309
Carg17152Cp4.1LG19g09210Cucurbita pepo (Zucchini)carcpeB1308
Carg17152CsGy3G040420Cucumber (Gy14) v2carcgybB0934
Carg17152CsGy6G030590Cucumber (Gy14) v2carcgybB0935
Carg17152MELO3C007834.2Melon (DHL92) v3.6.1carmedB0935
Carg17152MELO3C003818.2Melon (DHL92) v3.6.1carmedB0934
Carg17152CsaV3_6G046320Cucumber (Chinese Long) v3carcucB0990
Carg17152CsaV3_3G045310Cucumber (Chinese Long) v3carcucB0989
Carg17152Cla97C01G019040Watermelon (97103) v2carwmbB0992
Carg17152Cla97C05G100230Watermelon (97103) v2carwmbB0994
Carg17152Bhi03G001009Wax gourdcarwgoB1094
Carg17152Bhi09G001847Wax gourdcarwgoB1096
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17152Carg08717Silver-seed gourdcarcarB125
Carg17152Carg16051Silver-seed gourdcarcarB603
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17152Wax gourdcarwgoB1091
Carg17152Wax gourdcarwgoB1093
Carg17152Silver-seed gourdcarcarB226
Carg17152Silver-seed gourdcarcarB429
Carg17152Silver-seed gourdcarcarB647
Carg17152Cucumber (Gy14) v2carcgybB0933
Carg17152Cucumber (Gy14) v1carcgyB1065
Carg17152Cucurbita maxima (Rimu)carcmaB1292
Carg17152Cucurbita maxima (Rimu)carcmaB1294
Carg17152Cucurbita moschata (Rifu)carcmoB1262
Carg17152Cucurbita moschata (Rifu)carcmoB1264
Carg17152Cucurbita moschata (Rifu)carcmoB1265
Carg17152Cucurbita pepo (Zucchini)carcpeB1306
Carg17152Cucurbita pepo (Zucchini)carcpeB1307
Carg17152Cucurbita pepo (Zucchini)carcpeB1311
Carg17152Wild cucumber (PI 183967)carcpiB0983
Carg17152Cucumber (Chinese Long) v2carcuB0960
Carg17152Cucumber (Chinese Long) v3carcucB0988
Carg17152Bottle gourd (USVL1VR-Ls)carlsiB864
Carg17152Melon (DHL92) v3.5.1carmeB0927
Carg17152Melon (DHL92) v3.6.1carmedB0933
Carg17152Watermelon (Charleston Gray)carwcgB0922
Carg17152Watermelon (97103) v1carwmB0944
Carg17152Watermelon (97103) v2carwmbB0993
Carg17152Watermelon (97103) v2carwmbB0996