Carg17099 (gene) Silver-seed gourd

Overview
NameCarg17099
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSPA1-related 3 isoform 3
LocationCucurbita_argyrosperma_scaffold_062 : 476975 .. 479456 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACACTTCTTGCATCAGAAGTAGATTACTCTCATGATTAAATTGCGAAGAAAGTTTATTGATAGACGTGACTGTCATCCTCTTGACTGGTTCGAATTTGCTCGGACTTTGGGATCAAAGAAGACCAATGACGGCTAGTAGCTCTTTTTGCATTCATATCATTTGGTTTTAATTACGGATGGCTCTAATTGATAGATTGATTGGAGATGGGAGGCTATATTAGGGGGTTGCCTCGATAAGATAACAGGCTCGACTCATCGCATGTGGTCAGCGGGTCTCTAGGGGAAAGCATAAAGCAAAGCCATGAAGAAGCTATGACCACTACAACGTGCGACATGATAATCTATTGTGGGAGAGTTCGTGGTTCCTAACGATGCGCCTATCAAGAGTCATGCTTTTACGTATTAGCCATAGCGTTAAATGAAAAATCCTCAAATAGTCGACAGACAACTAGGAGAAAGTGTGTATATGCTCGAAGGTGTAGTGCAAAAAGCGTGAGACCTTCAGTGTCGAGAATCAGAGGCGGTTGCGCTACATAAATCACTTGTTCGAAGGAACTTGATTACTCAGAAGAAGGGAGTCAACTTCGTTGAAGGGGGACGGTGAGTCATACGATCCTGGATACGGCCTCCGCACTATGATGCTCAGCGGGCGGCCCTCTATACTGTACTCTTGTTTACGAGGGGAGGATGGTTGGGAGGGAGTCCCACCTTGTCTAATTTAGGAGTTGATCATGGGTTTATAAGTAAGGAATATCCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTGAAGAGTCGTAGTTCCGAACAAACTCTTCTTCTTTTCCTTCTTTTGAGAACATAGATCATTTTTCGCGGTCGGTGATGACAAAATGTTTATCACTGTATCTGATCTTCAATAGCTGTTTTTGATCAATATTTACCTCATTAGCTTTTGGAACATGAACATGTTGTTTCTGTATTCCCTGGATTAGGTTTTTATCTACCACAAAGCCTTCCCAATGCCAGCATTGTCGTATAAGTTTCAAATGGATCCTCTTTCCAGTCATGAAATGGACGACTCCGCACAGTTTATCTCTTCGGTTTGTTGGCGAGGCCAGTCGTCTTCGTTAGTAGCTGCAAACTCAACTGGGCACATCAAAATTTTGGAAATGGTTTAGAGAGAGGCAATGTCTTTAATAAGGGTAACTATTTGCAGTAAATTTGAGGCAGAGCAATATGTTGAATACCCATGAAGCTTGTCCAGCAGCTATAGCTTTCTACAAAGGTTAGATCTTAATATTAAGCAACAATAATTTGGCATTATACCATAGTGGATGAGGGCTTTTGTTTGGAAAAGATTGGTCTTGTTCATGTCTGTTGATAGAAATTCAAAGGAATAAGAGAGAGAGAGAGGTGTGGATATATCCCTATTCTTGTATAAATTGAATGCAAAATCTTCAGAGTAATTCAGTATATGGTAGTCTTGCATAACTCTCTTTACACAGAAAGGTGATTATAATCATTATCAAACATGTTTTGTTTCTCATTTAGAAGAACGAAGAACGGCAACATGAATGTTATCGAACGATAACAACTATGATTAGAGAATCACAGTGACATGGGAACTTTTATCTTTGCACTATCAATATTTCTTGTAGCTAAGACTATTTACACTGACCTTCACCTACTTTAGCAGCCGAAGTTAGCTTTTTTACGAGGCGGGTAAGCCTCTTAGCTCCTGGCCCTGGCTTGATCTTAAACGGGTTTCCGACTTTCGAGCATTTAGGCTTACCAGAACACCACCCACCAGGGGTAAAACTCCCTTTGTCATCACGTCTCAGTAGCTCCTGATCAATCTCGTCCAGAACAGGGTTGTCTCGCTGAAACTTTCGAGCAAAGGCAGCGCCGCTGGCTATCATTGTTTCGGTGTCGTTAATGGTGAGGGCATGAGGATGCTGTTGTGGTGGCATATCCCAAGAGATGTAATGCAAGTCATGGTTAACTACAGTTTTGGCAAACTCAGGCTCGTTGCAGATCACAGTGTGAAAGTAGCCTTCTGGGGAGGAAACAAAGTTTGTGTAATACATGAGAAGTGTTCTGGGAAGGTTGTCCCAACCCCAGATGAGATACTCGACAAACGAACGAGATAGAACCATCCATGCCGATCCTGGTAAAAGAACAAGCTAAGAACTTCAACAAAAAGGGCTCATTTGATAATGAAATTCTGCAGATTAGAATGATTGATCTGTTTCTTATCACAAACCAGTGAACAACTTGAATGATGTGGGGAGAGGTCGTTGTGGGTTGACCCAAAAAACATCTGATTTGGTTGTTTTGTATAATCCAGGATCTATCATCAATGGCATTGCTCGCTTACTCCTGCAAGAGAGACATTCAAATATTGACTGATTTCATCATCACAGGGCGAGAAAGAGAGAAAAAGAGAAGAAAGTGCTCACGCTTTCCATCCTAA

mRNA sequence

ATGGTGACACTTCTTGCATCAGAAGTTTTTATCTACCACAAAGCCTTCCCAATGCCAGCATTGTCGTATAAGTTTCAAATGGATCCTCTTTCCAGTCATGAAATGGACGACTCCGCACAGTTTATCTCTTCGGTTTGTTGGCGAGGCCAGTCGTCTTCGTTAGTAGCTGCAAACTCAACTGGGCACATCAAAATTTTGGAAATGCTCCTGATCAATCTCGTCCAGAACAGGGTTGTCTCGCTGAAACTTTCGAGCAAAGGCAGCGCCGCTGGCTATCATTGTTTCGGTGTCGTTAATGGTGAGGGCATGAGGATGCTGTTGTGGTGGCATATCCCAAGAGATGTAATGCAAGTCATGGTTAACTACAGTTTTGGCAAACTCAGGCTCGTTGCAGATCACAGTGTGAAAGTAGCCTTCTGGGGAGGAAACAAAGATCTATCATCAATGGCATTGCTCGCTTACTCCTGCAAGAGAGACATTCAAATATTGACTGATTTCATCATCACAGGGCGAGAAAGAGAGAAAAAGAGAAGAAAGTGCTCACGCTTTCCATCCTAA

Coding sequence (CDS)

ATGGTGACACTTCTTGCATCAGAAGTTTTTATCTACCACAAAGCCTTCCCAATGCCAGCATTGTCGTATAAGTTTCAAATGGATCCTCTTTCCAGTCATGAAATGGACGACTCCGCACAGTTTATCTCTTCGGTTTGTTGGCGAGGCCAGTCGTCTTCGTTAGTAGCTGCAAACTCAACTGGGCACATCAAAATTTTGGAAATGCTCCTGATCAATCTCGTCCAGAACAGGGTTGTCTCGCTGAAACTTTCGAGCAAAGGCAGCGCCGCTGGCTATCATTGTTTCGGTGTCGTTAATGGTGAGGGCATGAGGATGCTGTTGTGGTGGCATATCCCAAGAGATGTAATGCAAGTCATGGTTAACTACAGTTTTGGCAAACTCAGGCTCGTTGCAGATCACAGTGTGAAAGTAGCCTTCTGGGGAGGAAACAAAGATCTATCATCAATGGCATTGCTCGCTTACTCCTGCAAGAGAGACATTCAAATATTGACTGATTTCATCATCACAGGGCGAGAAAGAGAGAAAAAGAGAAGAAAGTGCTCACGCTTTCCATCCTAA

Protein sequence

MVTLLASEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKILEMLLINLVQNRVVSLKLSSKGSAAGYHCFGVVNGEGMRMLLWWHIPRDVMQVMVNYSFGKLRLVADHSVKVAFWGGNKDLSSMALLAYSCKRDIQILTDFIITGREREKKRRKCSRFPS
Homology
[Close]
BLAST of Carg17099 vs. NCBI nr
Match: XP_022976419.1 (protein SPA1-RELATED 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL
Sbjct: 774 NEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 833

Query: 67  EML 70
           EM+
Sbjct: 834 EMV 836

[Close]
BLAST of Carg17099 vs. NCBI nr
Match: XP_022936120.1 (protein SPA1-RELATED 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSS+VAANSTGHIKIL
Sbjct: 775 NEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSIVAANSTGHIKIL 834

Query: 67  EML 70
           EM+
Sbjct: 835 EMV 837

[Close]
BLAST of Carg17099 vs. NCBI nr
Match: XP_022936122.1 (protein SPA1-RELATED 3-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSS+VAANSTGHIKIL
Sbjct: 530 NEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSIVAANSTGHIKIL 589

Query: 67  EML 70
           EM+
Sbjct: 590 EMV 592

[Close]
BLAST of Carg17099 vs. NCBI nr
Match: XP_023535056.1 (protein SPA1-RELATED 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPALSYKFQMDPL+SHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL
Sbjct: 530 NEVFIYHKAFPMPALSYKFQMDPLTSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 589

Query: 67  EML 70
           EM+
Sbjct: 590 EMV 592

[Close]
BLAST of Carg17099 vs. NCBI nr
Match: XP_023535054.1 (protein SPA1-RELATED 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPALSYKFQMDPL+SHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL
Sbjct: 775 NEVFIYHKAFPMPALSYKFQMDPLTSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 834

Query: 67  EML 70
           EM+
Sbjct: 835 EMV 837

[Close]
BLAST of Carg17099 vs. TAIR10
Match: AT1G53090.1 (SPA1-related 4)

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-22
Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQ-MDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVF+YHKAFPMP LSYKF+ +DP+S  E+DD++QFISSVCWRGQSS+LVAANSTG+IKI
Sbjct: 731 NEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKI 790

Query: 67  LEML 70
           LEM+
Sbjct: 791 LEMV 794

[Close]
BLAST of Carg17099 vs. TAIR10
Match: AT3G15354.1 (SPA1-related 3)

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 44/64 (68.75%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKF-QMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVF+YHKAFPMP +SY F   D +S  E+DD++QFISS+CWRGQSS+LVAANS G+IKI
Sbjct: 773 NEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSSTLVAANSNGNIKI 832

Query: 67  LEML 70
           LEM+
Sbjct: 833 LEMM 836

[Close]
BLAST of Carg17099 vs. TAIR10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family)

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-14
Identity = 36/65 (55.38%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7    SEVFIYHKAFPMPALSYKF-QMDPLSSHE-MDDSAQFISSVCWRGQSSSLVAANSTGHIK 66
            +EV+ Y+K+ PMP  SYKF  +DP+S +E  DD+ QF+SSVCWR +S+ LVAANSTG++K
Sbjct: 965  NEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMK 1024

Query: 67   ILEML 70
            +L+++
Sbjct: 1025 LLKLV 1029

[Close]
BLAST of Carg17099 vs. TAIR10
Match: AT4G11110.1 (SPA1-related 2)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 31/65 (47.69%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 7    SEVFIYHKAFPMPALSYKF-QMDPLSSHEM-DDSAQFISSVCWRGQSSSLVAANSTGHIK 66
            +EV+ YH++ PMP  SYKF  +DP+S  E+ +D+  F+SSVCWR +S+ +V+A+S G IK
Sbjct: 972  NEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIK 1031

Query: 67   ILEML 70
            +L+++
Sbjct: 1032 VLQLV 1036

[Close]
BLAST of Carg17099 vs. TAIR10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EV++YHK    P  S++F    +   E +  + FIS+VCW+  S +++ ANS G IK+L
Sbjct: 612 NEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKVL 671

[Close]
BLAST of Carg17099 vs. Swiss-Prot
Match: sp|Q94BM7|SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-21
Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQ-MDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVF+YHKAFPMP LSYKF+ +DP+S  E+DD++QFISSVCWRGQSS+LVAANSTG+IKI
Sbjct: 731 NEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKI 790

Query: 67  LEML 70
           LEM+
Sbjct: 791 LEMV 794

[Close]
BLAST of Carg17099 vs. Swiss-Prot
Match: sp|Q9LJR3|SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 44/64 (68.75%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKF-QMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVF+YHKAFPMP +SY F   D +S  E+DD++QFISS+CWRGQSS+LVAANS G+IKI
Sbjct: 781 NEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSSTLVAANSNGNIKI 840

Query: 67  LEML 70
           LEM+
Sbjct: 841 LEMM 844

[Close]
BLAST of Carg17099 vs. Swiss-Prot
Match: sp|Q9SYX2|SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-13
Identity = 36/65 (55.38%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7    SEVFIYHKAFPMPALSYKF-QMDPLSSHE-MDDSAQFISSVCWRGQSSSLVAANSTGHIK 66
            +EV+ Y+K+ PMP  SYKF  +DP+S +E  DD+ QF+SSVCWR +S+ LVAANSTG++K
Sbjct: 965  NEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMK 1024

Query: 67   ILEML 70
            +L+++
Sbjct: 1025 LLKLV 1029

[Close]
BLAST of Carg17099 vs. Swiss-Prot
Match: sp|Q9T014|SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 31/65 (47.69%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 7    SEVFIYHKAFPMPALSYKF-QMDPLSSHEM-DDSAQFISSVCWRGQSSSLVAANSTGHIK 66
            +EV+ YH++ PMP  SYKF  +DP+S  E+ +D+  F+SSVCWR +S+ +V+A+S G IK
Sbjct: 972  NEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIK 1031

Query: 67   ILEML 70
            +L+++
Sbjct: 1032 VLQLV 1036

[Close]
BLAST of Carg17099 vs. Swiss-Prot
Match: sp|P43254|COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EV++YHK    P  S++F    +   E +  + FIS+VCW+  S +++ ANS G IK+L
Sbjct: 612 NEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKVL 671

[Close]
BLAST of Carg17099 vs. TrEMBL
Match: tr|A0A1S4DZA8|A0A1S4DZA8_CUCME (protein SPA1-RELATED 4 OS=Cucumis melo OX=3656 GN=LOC103493482 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVF+YHKAFPMPALSYKFQ+DPLSSHEMDDSAQFISSVCWR QSSSLVAANSTGHIKIL
Sbjct: 789 NEVFVYHKAFPMPALSYKFQIDPLSSHEMDDSAQFISSVCWRSQSSSLVAANSTGHIKIL 848

Query: 67  EML 70
           EM+
Sbjct: 849 EMV 851

[Close]
BLAST of Carg17099 vs. TrEMBL
Match: tr|A0A1R3HSG5|A0A1R3HSG5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_27174 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 54/63 (85.71%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPAL++KF MDPLS HEMDD+AQFISSVCWRGQSS+LVAANSTG+IKIL
Sbjct: 841 NEVFIYHKAFPMPALTFKFNMDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKIL 900

Query: 67  EML 70
           EM+
Sbjct: 901 EMV 903

[Close]
BLAST of Carg17099 vs. TrEMBL
Match: tr|A0A2P5QNR3|A0A2P5QNR3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD26878 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 52/64 (81.25%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKFQMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKIL 66
           +EVFIYHKAFPMPAL++KF MDPLS  EMDD+AQFISSVCWRG+SS+LVAANSTG+IKIL
Sbjct: 861 NEVFIYHKAFPMPALTFKFNMDPLSGQEMDDAAQFISSVCWRGRSSTLVAANSTGNIKIL 920

Query: 67  EMLL 71
           EM++
Sbjct: 921 EMMV 924

[Close]
BLAST of Carg17099 vs. TrEMBL
Match: tr|A0A061F7I9|A0A061F7I9_THECC (SPA1-related 3 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031518 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-21
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKF-QMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVFIYHKAFPMPAL++KF  MDPLS HEMDD+AQFISSVCWRGQSS+LVAANSTG+IKI
Sbjct: 869 NEVFIYHKAFPMPALTFKFNNMDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKI 928

Query: 67  LEML 70
           LEM+
Sbjct: 929 LEMV 932

[Close]
BLAST of Carg17099 vs. TrEMBL
Match: tr|A0A1R3GC01|A0A1R3GC01_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27131 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-21
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 7   SEVFIYHKAFPMPALSYKF-QMDPLSSHEMDDSAQFISSVCWRGQSSSLVAANSTGHIKI 66
           +EVFIYHKAFPMPAL++KF  MDPLS HEMDD+AQFISSVCWRGQSS+LVAANSTG+IKI
Sbjct: 832 NEVFIYHKAFPMPALTFKFNNMDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKI 891

Query: 67  LEML 70
           LEM+
Sbjct: 892 LEMV 895

The following BLAST results are available for this feature:
BLAST of Carg17099 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022976419.11.1e-2596.83protein SPA1-RELATED 4-like isoform X1 [Cucurbita maxima][more]
XP_022936120.11.8e-2595.24protein SPA1-RELATED 4-like isoform X1 [Cucurbita moschata][more]
XP_022936122.11.8e-2595.24protein SPA1-RELATED 3-like isoform X3 [Cucurbita moschata][more]
XP_023535056.12.4e-2595.24protein SPA1-RELATED 3-like isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_023535054.12.4e-2595.24protein SPA1-RELATED 4-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg17099 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53090.13.9e-2276.56SPA1-related 4[more]
AT3G15354.11.8e-1968.75SPA1-related 3[more]
AT2G46340.13.9e-1455.38SPA (suppressor of phyA-105) protein family[more]
AT4G11110.11.8e-1147.69SPA1-related 2[more]
AT2G32950.11.2e-0738.33Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Carg17099 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94BM7|SPA4_ARATH7.0e-2176.56Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1[more]
sp|Q9LJR3|SPA3_ARATH3.2e-1868.75Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1[more]
sp|Q9SYX2|SPA1_ARATH7.0e-1355.38Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV... [more]
sp|Q9T014|SPA2_ARATH3.3e-1047.69Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2[more]
sp|P43254|COP1_ARATH2.2e-0638.33E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
BLAST of Carg17099 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DZA8|A0A1S4DZA8_CUCME1.3e-2492.06protein SPA1-RELATED 4 OS=Cucumis melo OX=3656 GN=LOC103493482 PE=4 SV=1[more]
tr|A0A1R3HSG5|A0A1R3HSG5_9ROSI1.6e-2285.71Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_27174 PE=4 SV=1[more]
tr|A0A2P5QNR3|A0A2P5QNR3_GOSBA3.0e-2181.25Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD26878 PE=4 SV... [more]
tr|A0A061F7I9|A0A061F7I9_THECC4.0e-2184.38SPA1-related 3 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031518 PE=4 SV=1[more]
tr|A0A1R3GC01|A0A1R3GC01_COCAP4.0e-2184.38Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27131 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17099-RACarg17099-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 4..70
e-value: 1.4E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR44218FAMILY NOT NAMEDcoord: 7..68
NoneNo IPR availablePANTHERPTHR44218:SF1PROTEIN SPA1-RELATED 3-RELATEDcoord: 7..68

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17099CsGy4G021840Cucumber (Gy14) v2carcgybB0182
Carg17099Cla97C11G224130Watermelon (97103) v2carwmbB0175
Carg17099Bhi09G002801Wax gourdcarwgoB0219
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17099Carg14697Silver-seed gourdcarcarB204
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17099Silver-seed gourdcarcarB171
Carg17099Silver-seed gourdcarcarB206
Carg17099Cucumber (Gy14) v2carcgybB0181
Carg17099Cucumber (Gy14) v2carcgybB0185
Carg17099Cucumber (Gy14) v1carcgyB0206
Carg17099Cucumber (Gy14) v1carcgyB0208
Carg17099Cucurbita maxima (Rimu)carcmaB0224
Carg17099Cucurbita maxima (Rimu)carcmaB0225
Carg17099Cucurbita maxima (Rimu)carcmaB0227
Carg17099Cucurbita maxima (Rimu)carcmaB0229
Carg17099Cucurbita moschata (Rifu)carcmoB0235
Carg17099Cucurbita moschata (Rifu)carcmoB0237
Carg17099Cucurbita moschata (Rifu)carcmoB0239
Carg17099Cucurbita pepo (Zucchini)carcpeB0241
Carg17099Cucurbita pepo (Zucchini)carcpeB0242
Carg17099Cucurbita pepo (Zucchini)carcpeB0245
Carg17099Wild cucumber (PI 183967)carcpiB0193
Carg17099Wild cucumber (PI 183967)carcpiB0194
Carg17099Wild cucumber (PI 183967)carcpiB0197
Carg17099Cucumber (Chinese Long) v2carcuB0186
Carg17099Cucumber (Chinese Long) v2carcuB0187
Carg17099Cucumber (Chinese Long) v2carcuB0190
Carg17099Cucumber (Chinese Long) v3carcucB0193
Carg17099Cucumber (Chinese Long) v3carcucB0194
Carg17099Cucumber (Chinese Long) v3carcucB0197
Carg17099Bottle gourd (USVL1VR-Ls)carlsiB150
Carg17099Bottle gourd (USVL1VR-Ls)carlsiB151
Carg17099Bottle gourd (USVL1VR-Ls)carlsiB154
Carg17099Melon (DHL92) v3.5.1carmeB0172
Carg17099Melon (DHL92) v3.5.1carmeB0175
Carg17099Melon (DHL92) v3.5.1carmeB0177
Carg17099Melon (DHL92) v3.6.1carmedB0175
Carg17099Melon (DHL92) v3.6.1carmedB0178
Carg17099Melon (DHL92) v3.6.1carmedB0180
Carg17099Watermelon (Charleston Gray)carwcgB0161
Carg17099Watermelon (Charleston Gray)carwcgB0164
Carg17099Watermelon (97103) v1carwmB0159
Carg17099Watermelon (97103) v1carwmB0160
Carg17099Watermelon (97103) v2carwmbB0174
Carg17099Wax gourdcarwgoB0217