Carg17007 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17007
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Partner of Y14 and mago
Location	Cucurbita_argyrosperma_scaffold_061 : 1085682 .. 1090563 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGCTCAACTGGAACTTGTAATTTGGATTTGAGCCAAAATAATTTGCGTCCGGCCACCACTTCCTCTGGTTTCAACAACCTCAATTTTGGCACTGTCTTACTTACTTGCCCTCTTGCTGACGATGGGTAGCAGCGATGGAGGCGGAGGAGATCAACGGAAGCAAATGGCGGGGCTGAACAAAGCCCTAAAAGAGGGGGAAAGGATTCTGGCGCCGACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCTGGCTATGTTCCGCAGGAAGAAGTCGCCGTTTATCAGTCCAAAGGGTCTTTGGTATGAGCAGCAGCCTTCCCTTTTCCCTTTCTTCTTTTCTATTCAGCTATATTCTGCTTGCACCTTTATTATGTTGCTGTTGCTCGTTTAACTCGCATTTGAAACTCATACTAGGATAACCAAATCATCCTTTAAGCTGCTGCCCTTTATGTGTTTGCGTTAATGTGATATGTCAACGCTGCTCTCTAAATCACTATATCTTCCTTCTCTGTGATGTGTAAGACGAAGCACTGTGAAATACAGTAGCCCGTGACTTCAAGCGATCATTTCATCCGGTGGAGCGCACAATAGAAAGAAAAAAAAGTATGTAAATGATGGAATAGGATTGTGAAAGTAATGAGATAATGGAAGTCAAAGAAATATGTTTCTTTAAAATATGTCAGATTGGATTCGATTGAAGACTTGAATGTATGATCTCTTACCAAATTTAGGTTGACTTATTAGAATATTAGTTCTCAAGGAAGTTTCACTGTATTTTTTTAGTTTTAGAGTATTATTTTTAGAGTTTTACGTTACAATGTAGCTAGTGGCCATGATAGCCATTGTGGTATTGATGGGTAGAGAGTTACAACCTTTCAATTACCATAGGTTACTCTAGAGTTTATTTTCGAGGCTATAAATAGTCATTTATGTTTTTGCTTTACAATTAAGATTTTGGAGATTTTGGATACTAGAAGGATAGTTGCATCTTATGCTTCATAAACCATGAGCTTGTTCCCTTGCGTTTTATGTGTTTAGATTTGCATGATAGAGTCATTTAAGTAGTCATGAGCAATCTTTCTTGTGAATTGATTCGAATCTTGAGTTTAGAAACAAGTTTTTTTTACTCTTGATATTGATCATCAAGGTAAACTATTTCTATCTTCTTCATTGAGGTGAAATCATCTTGATTTGGGAGTTTTAGCATTAGCAAGATTTGGGAGTTTTAGCATTAGTGATCTAGGGGTTTGCATATCCCTAAGAGCTCTTAGATCCAATTGACTAAGGGTTTCATATCATTTCTTGGGACTCCATAAAGAAAACTAATGCTAATAACTTGGAATTTTCCTTCACAAAGTATGAGATACCGTGAGCTGTTTGTGATCTAGGTACCAACAAATCCCCTAGTTGGAACAGCTACACCATGGAATCTTATAAAAAATCGTGGAACGTCCTAAAACCCGACATGTTAAGGCTGTTCCAAGATTTTTCTTTTTTTAAAGAATGGTATCATCAATGGAAACCTTAACGAGAATTACAGTTGCCTTATACCCAAAAAGGTGGAAGCCATGTTAGTGGGAGATTTTAGGCCTATTAGCACACCATCTCCTTTCATTCATGTTATCAGAGCATCCATACAGAAAATAGAAGAAAATCTTTGGGAAACCTCGTCAAAGCTTTTGGGTAGTATCACTTCACTTACTATATCTTGTCGTTAGTTGTTACCTCTTTTTAGTTCTTACTCTTTTGACTCTCTTATGACCAATTGGAGAAGTCTTTGGCAGCCCTTTTGGCTTGGGATTTCTTTCCCCTCTTTTGTAATTTCATACATCAAGGAAATTGTTTCTTATACCCAAAAAAACAAAAACAAAATCCAAACCAACATCTTCGTGCGTGGAAAATTTTCTTCTTTAAAATGATAAAGATTAGCTAATACAATTCTTACCATAGCTCGCATGAGGAATGAATCAAAGGAGAAGTTATTTTATGTTCTTGAAAATTATAATTTGAGTGAAAAGCAGTCACTGAGTTCTATTGTTTTTCTGGTTGAAGTCTGATTCCTTTAGTTTACAGCACCCTAATATTCTTCTTTATGTCATTCATGGGGATTATTTTCTCTGTGGGATGCAGTGGAAAAAGATGGCATCCCATGACGGGCCTCCTGGTTATGATCCACCATCAGATGTAAAATCAAAGAGCAAGTCTGCCAAGCGGAATGAGAGAAAGAAAGACAAGCGAGTACAGGTTTGTTTTCCCCTCAATTGAGAATGTTACGTTATGTTTCTGATGGCATCTTAAATATTGTGAGACAAAATATTTGAAAAGCATAATGGGAGTTCATTTTTGGTTTATTTTCCGTGTGGTATGTTCAACTGATATAATGCCTGTCATCAAAACAAATTTATTTGTGATCCCTAACTGGCGATGAAAGTAACTAAAATTTATACGTCCGGGGGGCAGAAAACGATTTTCATCTCTACTTTCTGTTCTTTTCCCCCATCCAATGAAGTATGAGGACATGGTATTTTCTTCATTGTCATTTTTCTGCAGGCAGCCCATGAAAATGACAAAATTTTGGAACAAGTTGATGCTGGAGAGATCATTGAAGCAAAGGAATCATATGTCGATAATGTGTCGGAACCTGTCCAGTCATTAAGTACCCAGATGAATGAACTTGCTGTTTCTACGAATCAAAAGATTGAAAACCCTTCTTCTGAGCCAATGGATGATCAGCGGCTTCCTTCCAATGACATCGACAAGAGAATTAGAGCAATAAAAAAAAAGGTGAATACAAATTTGCGTTGGTAGAATATTACAAATCATATTTGATTCTAAGTCTTTCATGAAATTTGTCAATCCCATTGCATAAAAATTCTATTTTATCAGTTTTCATCATACGATACAAATTCAAGAACTAAAGGGAAACAATTAGATACTTGTTGTATCATACTCTTTGAACAACTTTCTTCCTGTGGGTACTCCTTGCTGGTATGGCATATTGGCCGGTGTAGATCTACCTGATCTTAGTTAAGTTATGAATTAAAAAAAATATGAGTTATAGAATGATTATTGTTTTTAAGGCCCAACTAGTTGTTCGTAAACTACATTAGTTAAGAATCTCATGTGCTGTCATCCTTAATTACCTTGATTCTGATTTCTTCACCTTACTTTGGGAGGCTAAATTGTTGGAGAAGATTACTATTTTTGCTTGGTTGGTTGGTTACCTTGGGGAGGATAAACGTTGTAAGGAGATCCATTGTGCTCTTTCCTCTTAGTTATGGACAGCTTCAGTAGACTCCTCACAAAGGCTGAATTATGAGGCAAAACCAAAGGCTTTCATGGGGGCAAGGGCGAGGTTAGTATTAGCCACAGACAAGTTAGGCCCCCCCTCAACAATTTAGGCTTCTGCGCCCAGGTTCAAGGCCTTGTTACCAAAGTTGATAGACCCAAAGAATTGAAGAGTGGGAAGCATATAGTCTGTTATAAGTGATTACGTTTCTAAAATCCAGAATGGTTGAGGAGTTTTAGAATTCTACTCTCTTCTACTCTAGACCCTCGTACCCTTTCTCGTCTCTCCCGAGCTGTATTAGCTCTAATATTACAGAGAAAACAGTATAGTAAGTATATAACAGCCTAGCTAGTTCATACTAGGGGTAGTTGTTGTAGATGATGCTGGTGGTGTTTGTGGCTTGTTTTCCACACTCTTATAAAGAATGTTTCGTTCTCCTCCTCAACCAATATGGGATCTCACAATTCACCCCCTTTGGGGCCAGCGTCTTTGCTGGCACTCGTTCCCTTCTCCAATCAATGTGGGACCCCTCAATCCCACCGCCTTCGAGGCCTAGTGTCCTTCCTACTAACACATTGCCCGGTGTCTGGCTTTGATACTATTTGTAACAGCCCAAGCCCACTGCTAGTAGATATTGTTCTCTTGGGGTTTTTCCTTTCGAGCTTCCCCTCAGTTTTTAAAACGCGTTTGCTAGGGAGAGATTTCCGCACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGAATCTCACAGTATTCTTGATGCAATACTACTTGTTCAAGAAATTCTTTTGTTCTTACAGTATTACTTACGCTCGGTGCCAGAACTTATATTTTCTATTTGCGAACATCTTTTAATGAATTATTGGTTGCTTTATGGACAGCTGAAGATTTGAGTTTTTCAATCTTTGATCGTTTTCCTTGTGTTGTTCTATTGTTTCGGTTTGCAGATTCGAATTGCAGAAGCTCAGTTGCAGAAAACGCCACAGCAAGATATGAAGCCGGAGCAGTTGAACAAGTTATCCAAACTCGAAGAGTGGCATTCCGAACTAACGCATCTAGAAGAACAAAGGCTAAAACTAAACACGTCGACATGAATGACTGGAACGCAGCATTATTGTTCACTTTACTTGTGCTTAATGAAGAAAAAGACCTGGAATTGCTGCAACTTGAAAATCTGGTTGCCTGTAAAACTCATTTTCTTAATGTGTTTGTGTAATATCATTTCAACTAGTTCTAGGAACCTGCTTGAACTGAACTGTAGATAGTGTTGAAAACATTGATTTTCTTTCGCCCGAACATGATTTAAAGTGATTTTTGAATCAAAATCATCGTGTTTGATCAATGAATTCATTAGCATATCAAAACTCTAATGGTGACGTCTCTTGACAAATGATTCCGCATATGATTCTAAGCAAACTTGGATGGGGGCAAGACTGAGATCCCATTGCTCTGGTTTATGGCCACTTAAACAATGAATAAGGTTGCTATGTGTCCTATTGGTGACTTCCACTTGTCCATTCATTTCTGGCTCGCTCGTAGAGCTATGCCTAAGTCTTAGTTTTCT

mRNA sequence

ATGGACGGCTCAACTGGAACTTGTAATTTGGATTTGAGCCAAAATAATTTGCGTCCGGCCACCACTTCCTCTGGTTTCAACAACCTCAATTTTGGCACTGTCTTACTTACTTGCCCTCTTGCTGACGATGGGTAGCAGCGATGGAGGCGGAGGAGATCAACGGAAGCAAATGGCGGGGCTGAACAAAGCCCTAAAAGAGGGGGAAAGGATTCTGGCGCCGACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCTGGCTATGTTCCGCAGGAAGAAGTCGCCGTTTATCAGTCCAAAGGGTCTTTGTGGAAAAAGATGGCATCCCATGACGGGCCTCCTGGTTATGATCCACCATCAGATGTAAAATCAAAGAGCAAGTCTGCCAAGCGGAATGAGAGAAAGAAAGACAAGCGAGTACAGGCAGCCCATGAAAATGACAAAATTTTGGAACAAGTTGATGCTGGAGAGATCATTGAAGCAAAGGAATCATATGTCGATAATGTGTCGGAACCTGTCCAGTCATTAAGTACCCAGATGAATGAACTTGCTGTTTCTACGAATCAAAAGATTGAAAACCCTTCTTCTGAGCCAATGGATGATCAGCGGCTTCCTTCCAATGACATCGACAAGAGAATTAGAGCAATAAAAAAAAAGATTCGAATTGCAGAAGCTCAGTTGCAGAAAACGCCACAGCAAGATATGAAGCCGGAGCAGTTGAACAAGTTATCCAAACTCGAAGAGTGGCATTCCGAACTAACGCATCTAGAAGAACAAAGGCTAAAACTAAACACGTCGACATGAATGACTGGAACGCAGCATTATTGTTCACTTTACTTGTGCTTAATGAAGAAAAAGACCTGGAATTGCTGCAACTTGAAAATCTGGTTGCCTGTAAAACTCATTTTCTTAATGTGTTTGTGTAATATCATTTCAACTAGTTCTAGGAACCTGCTTGAACTGAACTGTAGATAGTGTTGAAAACATTGATTTTCTTTCGCCCGAACATGATTTAAAGTGATTTTTGAATCAAAATCATCGTGTTTGATCAATGAATTCATTAGCATATCAAAACTCTAATGGTGACGTCTCTTGACAAATGATTCCGCATATGATTCTAAGCAAACTTGGATGGGGGCAAGACTGAGATCCCATTGCTCTGGTTTATGGCCACTTAAACAATGAATAAGGTTGCTATGTGTCCTATTGGTGACTTCCACTTGTCCATTCATTTCTGGCTCGCTCGTAGAGCTATGCCTAAGTCTTAGTTTTCT

Coding sequence (CDS)

ATGGGTAGCAGCGATGGAGGCGGAGGAGATCAACGGAAGCAAATGGCGGGGCTGAACAAAGCCCTAAAAGAGGGGGAAAGGATTCTGGCGCCGACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCTGGCTATGTTCCGCAGGAAGAAGTCGCCGTTTATCAGTCCAAAGGGTCTTTGTGGAAAAAGATGGCATCCCATGACGGGCCTCCTGGTTATGATCCACCATCAGATGTAAAATCAAAGAGCAAGTCTGCCAAGCGGAATGAGAGAAAGAAAGACAAGCGAGTACAGGCAGCCCATGAAAATGACAAAATTTTGGAACAAGTTGATGCTGGAGAGATCATTGAAGCAAAGGAATCATATGTCGATAATGTGTCGGAACCTGTCCAGTCATTAAGTACCCAGATGAATGAACTTGCTGTTTCTACGAATCAAAAGATTGAAAACCCTTCTTCTGAGCCAATGGATGATCAGCGGCTTCCTTCCAATGACATCGACAAGAGAATTAGAGCAATAAAAAAAAAGATTCGAATTGCAGAAGCTCAGTTGCAGAAAACGCCACAGCAAGATATGAAGCCGGAGCAGTTGAACAAGTTATCCAAACTCGAAGAGTGGCATTCCGAACTAACGCATCTAGAAGAACAAAGGCTAAAACTAAACACGTCGACATGA

Protein sequence

MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEIIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST

Homology

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BLAST of Carg17007 vs. NCBI nr
Match: XP_022931678.1 (partner of Y14 and mago-like [Cucurbita moschata])

HSP 1 Score: 420.6 bits (1080), Expect = 3.3e-114
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGGGDQ KQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS
Sbjct: 1   MGSSDGGGGDQLKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60

Query: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120
           KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII
Sbjct: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120

Query: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK 180
           EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK
Sbjct: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK 180

Query: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELT LEEQR KLNTST
Sbjct: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTLLEEQRRKLNTST 228

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BLAST of Carg17007 vs. NCBI nr
Match: XP_022969968.1 (partner of Y14 and mago-like [Cucurbita maxima])

HSP 1 Score: 418.7 bits (1075), Expect = 1.3e-113
Identity = 224/228 (98.25%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGGGDQ KQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS
Sbjct: 1   MGSSDGGGGDQLKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60

Query: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120
           KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII
Sbjct: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120

Query: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK 180
           EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK
Sbjct: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK 180

Query: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELT LEEQR KLNT T
Sbjct: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTLLEEQRAKLNTLT 228

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BLAST of Carg17007 vs. NCBI nr
Match: XP_023529475.1 (partner of Y14 and mago-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.2 bits (1071), Expect = 3.7e-113
Identity = 223/228 (97.81%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGGGDQ KQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS
Sbjct: 1   MGSSDGGGGDQLKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60

Query: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120
           KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII
Sbjct: 61  KGSLWKKMASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEII 120

Query: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKK 180
           EAKESYVDNVSEPVQSLSTQMNELAVSTNQ  ENPSSEPMDDQRLPSNDIDKRIRAIKKK
Sbjct: 121 EAKESYVDNVSEPVQSLSTQMNELAVSTNQTSENPSSEPMDDQRLPSNDIDKRIRAIKKK 180

Query: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWH+ELT LEEQRLKLNTST
Sbjct: 181 IRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHTELTLLEEQRLKLNTST 228

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BLAST of Carg17007 vs. NCBI nr
Match: XP_008455125.1 (PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 184/230 (80.00%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGG D RKQM  L+K LKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVA+YQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPP-SDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGE 120
           KG+LWKK MASHDGPPGYDPP +DVK+K+KSAKRNERKK+KR+QAAHE DK+LEQV   E
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 IIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIK 180
           I EAKE+YVDN  E +QSLS+QMNELAVSTN K+E+PSSEP+DD +LPS+D+DKRIRA K
Sbjct: 121 ITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           KKIR+AEAQLQKTP QDMKPEQ NKLSKLE W SEL  LEEQRLKLN+S+
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

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BLAST of Carg17007 vs. NCBI nr
Match: XP_011658835.1 (PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus] >XP_004136897.2 PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus] >KGN43775.1 hypothetical protein Csa_7G066320 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 6.4e-89
Identity = 183/230 (79.57%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGG D  KQM  L+K LKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVA+YQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPP-SDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGE 120
           KG+LWKK MASHDGPPGY+PP +DVK+K+KSAKRNERKK+KR+QAAHE DK+LEQV   E
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 IIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIK 180
           I EAKE+YVDN  EP+QSLS+QMNEL+VSTN K+E+PSSEP+DD +LPS+D+DKRIRA K
Sbjct: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           KKIR+AEAQLQKTP QDMKPEQ NKLSKLE W SEL  LEEQRLKLN+S+
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

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BLAST of Carg17007 vs. TAIR10
Match: AT1G11400.1 (partner of Y14-MAGO)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 95/212 (44.81%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 9   GDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKM 68
           G+Q K+MA L+K LKEGERIL PTRRPDGTLRKPIRIR GY P++EV  YQSKGSL KK 
Sbjct: 6   GEQGKRMAELSKNLKEGERILEPTRRPDGTLRKPIRIRPGYTPEDEVVKYQSKGSLMKKE 65

Query: 69  ASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEIIEAKESYVD 128
            +  GPPGY+P                                    A            
Sbjct: 66  MASQGPPGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSA-----------S 125

Query: 129 NVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKKIRIAEAQL 188
           N S+ V  L+++M  L VS+N  +   +  P         D++KRIRA+KKKIR+ EAQ 
Sbjct: 126 NGSQSVNVLASEMEALDVSSNNDVCGGAPNP----GTTGEDVEKRIRALKKKIRLTEAQQ 185

Query: 189 QKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQ 221
           QKT  +D+ PEQL K SKLEEW  EL  LE++
Sbjct: 186 QKTASRDLNPEQLEKFSKLEEWRQELKALEDK 202

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BLAST of Carg17007 vs. Swiss-Prot
Match: sp|Q9LPZ4|PYM1_ARATH (Partner of Y14 and mago OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-33
Identity = 95/212 (44.81%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 9   GDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKM 68
           G+Q K+MA L+K LKEGERIL PTRRPDGTLRKPIRIR GY P++EV  YQSKGSL KK 
Sbjct: 6   GEQGKRMAELSKNLKEGERILEPTRRPDGTLRKPIRIRPGYTPEDEVVKYQSKGSLMKKE 65

Query: 69  ASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEIIEAKESYVD 128
            +  GPPGY+P                                    A            
Sbjct: 66  MASQGPPGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSA-----------S 125

Query: 129 NVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIKKKIRIAEAQL 188
           N S+ V  L+++M  L VS+N  +   +  P         D++KRIRA+KKKIR+ EAQ 
Sbjct: 126 NGSQSVNVLASEMEALDVSSNNDVCGGAPNP----GTTGEDVEKRIRALKKKIRLTEAQQ 185

Query: 189 QKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQ 221
           QKT  +D+ PEQL K SKLEEW  EL  LE++
Sbjct: 186 QKTASRDLNPEQLEKFSKLEEWRQELKALEDK 202

[Close]

BLAST of Carg17007 vs. Swiss-Prot
Match: sp|B5XG19|PYM1B_SALSA (Partner of Y14 and mago B OS=Salmo salar OX=8030 GN=pym1b PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-08
Identity = 63/219 (28.77%), Postives = 97/219 (44.29%), Query Frame = 0


Query: 24  EGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKMASHDGPPGYDPPSDV 83
           E  + +A T+RPDGT RKP +++ GY PQEEV VY++K   + K    D PPG  P  + 
Sbjct: 9   ESGKYIAATQRPDGTWRKPRKVKDGYTPQEEVPVYENKFVKFFK-GKPDLPPGMSPGDEA 68

Query: 84  KSK-----------------SKSAKRNERKKDKRVQAAHENDKILEQVDAGEIIEAKESY 143
           +++                 SK+AKRN ++K+KR                          
Sbjct: 69  QARQQQQGIPGIAESETAGLSKTAKRNMKRKEKR-------------------------- 128

Query: 144 VDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSN---DIDKRIRAIKKKIRI 203
              +  P  ++   +N         +E P+S P +    PS    +  K+I+ +KKK+R 
Sbjct: 129 --KLQGPDSNVEALIN--------AVEMPTSNPAEATNDPSGAAAEKAKKIKNLKKKLRQ 188

Query: 204 AEAQLQKTPQQDMK---PEQLNKLSKLEEWHSELTHLEE 220
            E   QK    ++K    EQL+KL + +     L  LEE
Sbjct: 189 VEELQQKLDSGEIKQATKEQLDKLGRAKAIQDGLLQLEE 190

[Close]

BLAST of Carg17007 vs. Swiss-Prot
Match: sp|B5XDD3|PYM1A_SALSA (Partner of Y14 and mago A OS=Salmo salar OX=8030 GN=pym1a PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 27  RILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKMASHDGPPGYDP------- 86
           + +A T+RPDGT RKP R++ GY PQEEV VY++K   + K    D PPG  P       
Sbjct: 12  KYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFFK-GKPDLPPGMSPGNAAQAR 71

Query: 87  ---------PSDVKSKSKSAKRNERKKDKRVQAAHEND 109
                     +++   SK+AKRN ++K+KR Q   +++
Sbjct: 72  QQQGIPGIAENEIAGLSKTAKRNMKRKEKRKQQGPDSN 108

[Close]

BLAST of Carg17007 vs. Swiss-Prot
Match: sp|B0WII7|PYM_CULQU (Partner of Y14 and mago OS=Culex quinquefasciatus OX=7176 GN=Pym PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-07
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 27 RILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKMAS 71
          + +  T+RPDGT RKP R+R GYVPQEEV +Y+SKG L+ +  S
Sbjct: 11 KFIPATQRPDGTWRKPRRVRDGYVPQEEVPLYESKGKLFAQKPS 54

[Close]

BLAST of Carg17007 vs. Swiss-Prot
Match: sp|Q7Q6B5|PYM_ANOGA (Partner of Y14 and mago OS=Anopheles gambiae OX=7165 GN=Pym PE=3 SV=4)

HSP 1 Score: 55.5 bits (132), Expect = 9.2e-07
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 27 RILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQSKGSLWKKMASHDG-PPGYDPPSDVKS 86
          + +  T+RPDGT RKP R+R GYVPQEEV +Y+SKG   K+ A     PPG  P    K+
Sbjct: 11 KFIPATQRPDGTWRKPRRVRDGYVPQEEVPLYESKG---KQFAQKPALPPGLSPEVVQKA 68

[Close]

BLAST of Carg17007 vs. TrEMBL
Match: tr|A0A1S3BZS1|A0A1S3BZS1_CUCME (partner of Y14 and mago isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495372 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.4e-89
Identity = 184/230 (80.00%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGG D RKQM  L+K LKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVA+YQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPP-SDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGE 120
           KG+LWKK MASHDGPPGYDPP +DVK+K+KSAKRNERKK+KR+QAAHE DK+LEQV   E
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 IIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIK 180
           I EAKE+YVDN  E +QSLS+QMNELAVSTN K+E+PSSEP+DD +LPS+D+DKRIRA K
Sbjct: 121 ITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           KKIR+AEAQLQKTP QDMKPEQ NKLSKLE W SEL  LEEQRLKLN+S+
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of Carg17007 vs. TrEMBL
Match: tr|A0A0A0K274|A0A0A0K274_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066320 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 4.2e-89
Identity = 183/230 (79.57%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGG D  KQM  L+K LKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVA+YQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPP-SDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGE 120
           KG+LWKK MASHDGPPGY+PP +DVK+K+KSAKRNERKK+KR+QAAHE DK+LEQV   E
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 IIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAIK 180
           I EAKE+YVDN  EP+QSLS+QMNEL+VSTN K+E+PSSEP+DD +LPS+D+DKRIRA K
Sbjct: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           KKIR+AEAQLQKTP QDMKPEQ NKLSKLE W SEL  LEEQRLKLN+S+
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of Carg17007 vs. TrEMBL
Match: tr|A0A1S3C0A7|A0A1S3C0A7_CUCME (partner of Y14 and mago isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495372 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.1e-76
Identity = 168/231 (72.73%), Postives = 187/231 (80.95%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSSDGGG D RKQM  L+K LKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVA+YQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPP-SDVKSKSKSAKRNE-RKKDKRVQAAHENDKILEQVDAG 120
           KG+LWKK MASHDGPPGYDPP +DVK+K+KSAKRNE                        
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNEXXXXXXXXXXXXXXXXXXXXXXVE 120

Query: 121 EIIEAKESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMDDQRLPSNDIDKRIRAI 180
           EI EAKE+YVDN  E +QSLS+QMNELAVSTN K+E+PSSEP+DD +LPS+D+DKRIRA 
Sbjct: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTST 229
           KKKIR+AEAQLQKTP QDMKPEQ NKLSKLE W SEL  LEEQRLKLN+S+
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231

[Close]

BLAST of Carg17007 vs. TrEMBL
Match: tr|V4V0E4|V4V0E4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002345mg PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.8e-61
Identity = 145/234 (61.97%), Postives = 174/234 (74.36%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           MGSS+GGG ++ K+MA L+K LKEGERILAPTRRPDGTLRKPIRIRAGYVPQ+EVA+YQS
Sbjct: 1   MGSSNGGGDEELKRMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQS 60

Query: 61  KGSLWKK--MASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGE 120
           KG+L +K   A  + PPGYDP  D K K+KS KRNERKK+KR QAA E  KI+E++  GE
Sbjct: 61  KGALLRKELTALQEAPPGYDPELDAKPKTKSVKRNERKKEKRQQAALEKGKIVEKLVDGE 120

Query: 121 IIEAKESYVDNVSE---PVQSLSTQMNELAVSTNQKIENPSSEPMD--DQRLPSNDIDKR 180
           I   +    +N+S       SL++QMNEL+VS N  +ENP S+  D  D   P  DIDKR
Sbjct: 121 IKTEEVVSAENLSHGSASTDSLTSQMNELSVSANPVVENPLSDAKDPGDAGAPGQDIDKR 180

Query: 181 IRAIKKKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQRLKLNTS 228
           IRAIKKKIR+AEAQ QK  QQ++KPEQL KLSKLE WH+EL  LEE++  L  S
Sbjct: 181 IRAIKKKIRLAEAQQQKAGQQELKPEQLEKLSKLEGWHNELKLLEEKKADLEAS 234

[Close]

BLAST of Carg17007 vs. TrEMBL
Match: tr|A0A0B0MUI6|A0A0B0MUI6_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum OX=29729 GN=F383_03167 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-60
Identity = 142/227 (62.56%), Postives = 172/227 (75.77%), Query Frame = 0


Query: 1   MGSSDGGGGDQRKQMAGLNKALKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAVYQS 60
           M S++GGG  Q K+ A L K LKEGERIL P+RRPDGTLRKP+RIRAGYVPQEEVA+YQS
Sbjct: 1   MASNNGGGEQQSKKTAELGKPLKEGERILEPSRRPDGTLRKPVRIRAGYVPQEEVAIYQS 60

Query: 61  KGSLWKK-MASHDGPPGYDPPSDVKSKSKSAKRNERKKDKRVQAAHENDKILEQVDAGEI 120
           KG+LWKK MAS  GPPGYDPP+D K K+KSAKRNERKK+KRVQAA E  K  E V AG+ 
Sbjct: 61  KGALWKKEMASQVGPPGYDPPTDTKLKTKSAKRNERKKEKRVQAALEKGKNSEAV-AGDE 120

Query: 121 IEA---KESYVDNVSEPVQSLSTQMNELAVSTNQKIENPSSEPMD--DQRLPSNDIDKRI 180
           I+     E  +D+ SE ++SL++QM +LAV  N    +P S  +D  D   P+ D+DK+I
Sbjct: 121 IKGDGLTEEDLDHGSESIKSLTSQMTDLAVFQNLVSTSPLSNSVDASDAVTPAQDLDKKI 180

Query: 181 RAIKKKIRIAEAQLQKTPQQDMKPEQLNKLSKLEEWHSELTHLEEQR 222
           RA+KKKIR+ EAQ QKTPQQDMKPEQL KL+KLE W  EL  LE+++
Sbjct: 181 RALKKKIRLVEAQQQKTPQQDMKPEQLEKLAKLEGWREELKLLEDKK 226

The following BLAST results are available for this feature:

BLAST of Carg17007 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931678.1	3.3e-114	98.68	partner of Y14 and mago-like [Cucurbita moschata]	[more]
XP_022969968.1	1.3e-113	98.25	partner of Y14 and mago-like [Cucurbita maxima]	[more]
XP_023529475.1	3.7e-113	97.81	partner of Y14 and mago-like [Cucurbita pepo subsp. pepo]	[more]
XP_008455125.1	2.2e-89	80.00	PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo]	[more]
XP_011658835.1	6.4e-89	79.57	PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus] >XP_0041368...	[more]

BLAST of Carg17007 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11400.1	1.1e-34	44.81	partner of Y14-MAGO	[more]

BLAST of Carg17007 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LPZ4\|PYM1_ARATH	2.0e-33	44.81	Partner of Y14 and mago OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1	[more]
sp\|B5XG19\|PYM1B_SALSA	3.8e-08	28.77	Partner of Y14 and mago B OS=Salmo salar OX=8030 GN=pym1b PE=2 SV=2	[more]
sp\|B5XDD3\|PYM1A_SALSA	1.9e-07	37.76	Partner of Y14 and mago A OS=Salmo salar OX=8030 GN=pym1a PE=2 SV=1	[more]
sp\|B0WII7\|PYM_CULQU	5.4e-07	56.82	Partner of Y14 and mago OS=Culex quinquefasciatus OX=7176 GN=Pym PE=3 SV=1	[more]
sp\|Q7Q6B5\|PYM_ANOGA	9.2e-07	50.82	Partner of Y14 and mago OS=Anopheles gambiae OX=7165 GN=Pym PE=3 SV=4	[more]

BLAST of Carg17007 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZS1\|A0A1S3BZS1_CUCME	1.4e-89	80.00	partner of Y14 and mago isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495372 PE=4 ...	[more]
tr\|A0A0A0K274\|A0A0A0K274_CUCSA	4.2e-89	79.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066320 PE=4 SV=1	[more]
tr\|A0A1S3C0A7\|A0A1S3C0A7_CUCME	4.1e-76	72.73	partner of Y14 and mago isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495372 PE=4 ...	[more]
tr\|V4V0E4\|V4V0E4_9ROSI	2.8e-61	61.97	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002345mg PE=4 ...	[more]
tr\|A0A0B0MUI6\|A0A0B0MUI6_GOSAR	9.1e-60	62.56	Partner of Y14 and mago OS=Gossypium arboreum OX=29729 GN=F383_03167 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:1903259	exon-exon junction complex disassembly

Vocabulary: **INTERPRO**
Term	Definition
IPR036348	WIBG_N_sf
IPR039333	PYM1
IPR015362	WIBG_mago-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903259	exon-exon junction complex disassembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17007-RA	Carg17007-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 207..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..169
IPR015362	WIBG, Mago-binding	SMART	SM01273	Mago_bind_2	coord: 25..51 e-value: 2.1E-11 score: 53.9
IPR015362	WIBG, Mago-binding	PFAM	PF09282	Mago-bind	coord: 25..51 e-value: 8.0E-14 score: 51.1
IPR039333	Partner of Y14 and mago	PANTHER	PTHR22959	PYM PROTEIN	coord: 17..223
IPR036348	WIBG, N-terminal domain superfamily	SUPERFAMILY	SSF101931	Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain	coord: 23..51

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17007	CmaCh11G011790	Cucurbita maxima (Rimu)	carcmaB0651
Carg17007	CmoCh11G012610	Cucurbita moschata (Rifu)	carcmoB0632
Carg17007	Cp4.1LG04g00090	Cucurbita pepo (Zucchini)	carcpeB0657

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17007	Wild cucumber (PI 183967)	carcpiB0504
Carg17007	Cucumber (Chinese Long) v3	carcucB0501
Carg17007	Melon (DHL92) v3.5.1	carmeB0473
Carg17007	Melon (DHL92) v3.6.1	carmedB0477