Carg16951 (gene) Silver-seed gourd

NameCarg16951
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_061 : 340582 .. 344292 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACCCAAGGAGTGGCTTAGGAAGAAGTGGGGAATAAACTGCCTGATTTGTATTAGAAAAATTACCCATTTGGTGCTACATTCCATTATTGTTGTTGTTGCTGCTATGTGCATTATTTATCTTAGTTTCTTTGTTTTCTCTAATTATGGTCTCACTATACTCTGTTGGTTCAGAAAGGGAATCGGAATTGTGGAATATATCAGTATCAAAATGCTATCGGTTCCACATCCTCAGATGAGTGCTTTATAATAAGATTAGTGGGTTTCAGTCTAGTATTTCTTTTATAGAATATTGCCTGCATTATAAGAGCCAGAATATACTTTTTACTTTATGAAAAGGGGGATATTGTGGCCAACTTAGTGGGTGTGATCAGTGATCACAGCTACAACTTTTTCTTTTTTGGAGGGTCCCAAACGTTTTCCCATTAGACACGTCTGGTAAGTATGTCCATTTAAGATTTTGTTTGTAAAGTTAGGTGGATTGGCTAGCTTCCTGGCTGGGGTTTGGTGCATTATTGAGGTTAACTTAAGGGGAAAGTTTGAGAAGGAGAAGAAGAATAGATGGTAAGGAGCTAGAGCAGCTTGGTGGTGCTTTTAGGCCAAGAGAGGGAAGACCGAACATGTAATAACTTGAGTGCGTAAAAGCCTAAGTTCACCGTTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTTCGGGCTTTCCCTTAAAGTTTTAAAACGCGTCTGCGAGGTAGAGATTTTCATACCCTTATAAAGAATATTTCGTTCTCCTTCCCAACCGATGTAGGATCTCACAATCCACTCCCTTTCGAGTCCTAGCATCCTCACTAGCACACTGCCTGGTGTCCATCCCCCTTCTGGGCTCAGCCTCCTCGCTGACACATCAATCGGTGTCTGCCTCCAATACCATTTGTAACAGCCCAAGCCGCTACTAACCGATATTATCCTCTTTAGACTTTCCCTTTCGAACATCTCTCAAGACTTTAAAATGTGTCTATTAAGGAAAGGTTTCCACACTCTTATAAAGAATGCTTCGATCTCCTCCCCAACCGATGTGGGATCTCATAGAGTAAGTTTTCATGATCCGACTCTGCAAGGACTTGCAAGTAGTCAGTCATTGATCTTTCTAACAGTGGCCGAATCTTCCCATTATTGAGCTATGGATTCAAATCTATCCATCATATTTGTAGGGAAACAGTGTGAAACATTTTTATTAACTTCTGAAAAGGAAATGTATGCCTTAGAGGGAGAATTGACAATGCCATAGTATTAAATCAGAGCCTTTAGAACAGTCGAGAAAGAGTCTTTTTGGAAGCGTTGATGAGGTTTTATTGATTAACATAATTGGGGAGAGAGAAGAGAGAGTTGGTGTGAGCCATAAAGGAACGCAACGCTCCCATGGAGCCTTTGCGGTCAATTCTTCATTAAATATATATATTTGGTATTGTTTCCCTGTTGATTATATCCCTGGATTCATGCTGGATTGGTTGCCAATGCCATTAAGTTTCTAGAGACAGATTGATTGATACCTTTGATGTGAGTTCTCAAGGCAACTTTGTTTACATATATGTTTGGATTTGAAGGGTTTGGGATGTAGTTATGGTTATGGTTATGGTTGGAAAATGGCCATTAAAAGTTTCTGTAAATGTCAGTTTATGACTGTAGAAGAAGAACATTCCTTTAGTAATTCATATTTATGACTTACCCTTTTTAGTTTTCATTGAAGGAAGCACACTTTGAGTTACGTACACTTTCTTTATTAGAAGTGAATTTAATTGCTAAATCTATTTGGTTAAACTTACATTTAAAAGTGATTCTACAAAGGTTGTTGTCCTTACAGAATTGATTTTGTAGTTGTTACCAAAGATTGAATATTACTTTTGAAAGTGTCAACTAAAAGCATAAATCCTACCTTGAATTAAGATTTTTAAGAGTGGCCAAATGCGAGACTTGGAACCTCTAGAATTTGTAGGTAAGATAAGCTTATGAGAGTGTCAATCAATTGAACTGCTAGGTTTAAAATAAGGTGGTTGGATCTAATGGCGGGTGAATCATTGATCAAAGAGAGTTTTATCGATCTAGTGGTTCATGAATCACTGATTAAAGAGTGTGTAATGACTTTAGTTTTCTATTAACCAAAAATTGCTAATACTTTATGTGGAAATAATTATTTAAAACGTTTTCATAAAACAATGTCATGGACTTCCATGTCTAAGAAAAATGTCTTAAAATAATACAATGAAAAAAAAAAATAGGCATAAATAAAAACAAGACAACAAGGTCATATGTTATCCTAAGGTCTATGAAATTATATGCGACTATTCTGTACATGTGTCATGATCTTTAAATTTGTGATGTTGTTGTCAACGATGGAGAGGTAACATGTGCTTGAGTATTTTAAGAAATATTAGGTGACCCTACTATATTGGGGTTAGGAAATGCAAGACATGCAACATAAATAGGACCTATCGTTTTAAAGTCGTATTCCTTTAGATAACTATCAACTAGGTCGTTGGATGTGTATTTACTATTCTACACACGGTTCATAAGTGCGAATATGAATGAACCCACCAGTCGGTCCGCACACCTTCTGGACCCTATTCGAGTCGGGCTAGCATTCTCTGGTGTTGTTGCCGAACACTCGGAATGAGTAGCGACCGTCAAAGCATCATGTTAAATATAATGATCATTTTTCTTATTTATAATGTACGCATTCGTACTCATCATAAAAGGTAATACAATAATGCATGGGACATACAATAATGCATGAGGTCCCAACATTTCCCCCATTAATTAACCCGTGTAATACAACCCCTTCCTATTTTCCCTCTATATCATAGCACTTTATATCATAGCTTTCAAAAACATATCTTGGGGTTGTACATCATGGCAAAACATTTTATCACATATCAAACATCGTATCATATCGTGTCATATCATACATGTATCATATCATAAAACATATCATGTCACATGTATCATATCCCAAAGCATATCATAGAATAGACATAGCATATTATAAACACATCAACATAACAGACATATGACATGTGCAAAGCCACTAGGCAGGTGTCATCAATCTAACAAAAACTTCTAACATATGACATTCTCAAAAGTTTCTATATTATCATAACTTTTCATAAACGTTTCAAAAATATATTTGAAACAAAAATGACGTAGAATGATAGATGAAAATTATAAATAAAACGCTCATCATATTATAACAGCTCAAACTCATATCTAGCAGATATTTTTCTCTTCGTACTTTAGGAAAACAAAAGTCCAAGGCTTTGTAAATAACAAATGTTTTGTTTTGTTCCCATCTCCAAGAGATGCAAGATCTCACACATACCATTTCAAGTCATCGAGTCCCAACTTTTATAAAAAGCTTATAATGAATCAAAAGTTTTGAATCATTTACGAGATCGTTTCAAAATCGAGATCTTTGAGACAACTTCGAGGGTTAAATGAGTAATTTCACATCTCAGCTATTATGAATACTTAGCATCCGTGCCGTTTAGCAAAATGCCGAGTGGCGGGAAAAGAGCTCACGAAGTCCCAAATCCCAACCGATCACAATTCACAGACCACACTCACCGGAAGTGCAAGCCTACAGACAACCAGAGAGGAGCCATTTTCAATACCCGTCGTGGCTGTTACTCAAGCAATTTGAATCTTGAATCTAAAGGTGGCCCTCCTTTTGTCTAG

mRNA sequence

ATGGCTGACCCAAGGAGTGGCTTAGGAAGAAAGCCTTTAGAACAGTCGAGAAAGAGTCTTTTTGGAAGCGTTGATGAGGTTTTATTGATTAACATAATTGGGGAGAGAGAAGAGAGAGTTGGTGTGAGCCATAAAGGAACGCAACGCTCCCATGGAGCCTTTGCGAGTGGCCAAATGCGAGACTTGGAACCTCTAGAATTTGTAGCATCCGTGCCGTTTAGCAAAATGCCGAGTGGCGGGAAAAGAGCTCACGAAGTCCCAAATCCCAACCGATCACAATTCACAGACCACACTCACCGGAAGTGCAAGCCTACAGACAACCAGAGAGGAGCCATTTTCAATACCCGTCGTGGCTGTTACTCAAGCAATTTGAATCTTGAATCTAAAGGTGGCCCTCCTTTTGTCTAG

Coding sequence (CDS)

ATGGCTGACCCAAGGAGTGGCTTAGGAAGAAAGCCTTTAGAACAGTCGAGAAAGAGTCTTTTTGGAAGCGTTGATGAGGTTTTATTGATTAACATAATTGGGGAGAGAGAAGAGAGAGTTGGTGTGAGCCATAAAGGAACGCAACGCTCCCATGGAGCCTTTGCGAGTGGCCAAATGCGAGACTTGGAACCTCTAGAATTTGTAGCATCCGTGCCGTTTAGCAAAATGCCGAGTGGCGGGAAAAGAGCTCACGAAGTCCCAAATCCCAACCGATCACAATTCACAGACCACACTCACCGGAAGTGCAAGCCTACAGACAACCAGAGAGGAGCCATTTTCAATACCCGTCGTGGCTGTTACTCAAGCAATTTGAATCTTGAATCTAAAGGTGGCCCTCCTTTTGTCTAG

Protein sequence

MADPRSGLGRKPLEQSRKSLFGSVDEVLLINIIGEREERVGVSHKGTQRSHGAFASGQMRDLEPLEFVASVPFSKMPSGGKRAHEVPNPNRSQFTDHTHRKCKPTDNQRGAIFNTRRGCYSSNLNLESKGGPPFV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16951-RACarg16951-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..109

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16951CmoCh10G009870Cucurbita moschata (Rifu)carcmoB0631
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16951Cucurbita moschata (Rifu)carcmoB0633
Carg16951Cucurbita moschata (Rifu)carcmoB0634
Carg16951Cucurbita moschata (Rifu)carcmoB0635
Carg16951Cucurbita pepo (Zucchini)carcpeB0654
Carg16951Cucurbita pepo (Zucchini)carcpeB0655
Carg16951Cucurbita pepo (Zucchini)carcpeB0656
Carg16951Cucurbita pepo (Zucchini)carcpeB0658
Carg16951Wild cucumber (PI 183967)carcpiB0506
Carg16951Wild cucumber (PI 183967)carcpiB0508
Carg16951Cucumber (Chinese Long) v2carcuB0499
Carg16951Cucumber (Chinese Long) v3carcucB0505
Carg16951Cucumber (Chinese Long) v3carcucB0503
Carg16951Bottle gourd (USVL1VR-Ls)carlsiB422
Carg16951Bottle gourd (USVL1VR-Ls)carlsiB423
Carg16951Bottle gourd (USVL1VR-Ls)carlsiB424
Carg16951Melon (DHL92) v3.5.1carmeB0471
Carg16951Melon (DHL92) v3.5.1carmeB0472
Carg16951Melon (DHL92) v3.5.1carmeB0474
Carg16951Melon (DHL92) v3.6.1carmedB0474
Carg16951Melon (DHL92) v3.6.1carmedB0475
Carg16951Melon (DHL92) v3.6.1carmedB0478
Carg16951Watermelon (Charleston Gray)carwcgB0453
Carg16951Watermelon (Charleston Gray)carwcgB0454
Carg16951Watermelon (97103) v1carwmB0463
Carg16951Watermelon (97103) v1carwmB0465
Carg16951Watermelon (97103) v2carwmbB0489
Carg16951Watermelon (97103) v2carwmbB0490
Carg16951Wax gourdcarwgoB0566
Carg16951Wax gourdcarwgoB0567
Carg16951Wax gourdcarwgoB0568
Carg16951Wax gourdcarwgoB0570
Carg16951Silver-seed gourdcarcarB208
Carg16951Silver-seed gourdcarcarB380
Carg16951Silver-seed gourdcarcarB463
Carg16951Silver-seed gourdcarcarB464
Carg16951Cucumber (Gy14) v2carcgybB0475
Carg16951Cucumber (Gy14) v2carcgybB0477
Carg16951Cucumber (Gy14) v1carcgyB0537
Carg16951Cucumber (Gy14) v1carcgyB0539
Carg16951Cucurbita maxima (Rimu)carcmaB0649
Carg16951Cucurbita maxima (Rimu)carcmaB0650
Carg16951Cucurbita maxima (Rimu)carcmaB0652
Carg16951Cucurbita maxima (Rimu)carcmaB0653