Carg16872 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16872
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CDT1-like protein a, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_105 : 548398 .. 551464 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTGCCCTTTCCCATCTCTTCCAATCGGTAACAATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAGTAAGTCTTTCGTTTCTTGATCTTGAATTTGGATTATTGATGGCTGGTTGCTTTTAGATCTAGTATCAATGTTTAGTGAATGAATGTTGTTACTTTGGTGTTTGCAGATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGGTACTTATTCTGCCTTCTACATTGACTTTTCCTCTCGGATGCCATGGTCAATTTATGTGTTGATACTGCAGTTAATTTAGTATTTTGGATAGTACATTGAATTATTTATCTTACTTAGGTGCTTAAGTAACACTGAAGAAGTTTATTAGATCCTCTATTGTTAGCTTGTAACAAAATACTGCTTGTTTGTAATGATAATTGATTAAGAACAATGACGAATAACTTCGTTCTAAATATATGATTATTTGTTCGTGAAGTGTAATTGTTTTTGTTCTGATATAGGAAGTTAAGCCTCACAAGATTGGTTTTCGAACCTTCAGTCTTGATTTTTTGGCCACTAGTTCTTTGACTTATTTTACTACTCTGAGAGCATCTCTAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGGTATGCTGCATTTTCCTTCTCTGATTTGTAGATGTAGTATTTGTTTGTGTTTGTGGTCATGAATCCTAGAATGTTAATTCTCTCTCTATAGTTACTGGTCTTAAATGTGAACTTGGGATCCCTCTGTTATTTGCTAGTGCTTGCTCTGATTTCTAGTTGTGCTACATAATGTCTTAAAACAGAAGCATTGATGATGCCTGCTGGATGTGCTTGTCCCAAATTGTGTAGTGTAGGAATTAAGTTGGTGGTCATACCAAGGATTGATAGCATTCTGGTCACTTTAGTTTATAGTTATCATTTATTTGATGACCACTCATGATGCTTGATTTTTCTTATTCAATTTGGAAGCCAATCTTCTCCTGTAGTATTTTGGAAGTATTGTATCCCCCGTCTTCAAATTTTAACATTCTAAGACATGCTTTTATATTCAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGGTATGACCATTCCCTATCTTATAACCAATTCTCTCTTATTTTGTGCTTGATTGAAACTTCCATTTGCAGTCAAGCATGGCAATTTATGTTAATAATTTCTCGTGTTCTCAATTTGAATAATTTCTCGTGTTCTCAATTTGCAGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAGTAAGCAAATAGCGCATCTATTATAATTACATTCCATTTTATTTTAGCTTGTCTGGAGCTGATTCTGATTCATTTCATATGTTCTTACTTGTAGAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

mRNA sequence

TCTCTCTCTCTGCCCTTTCCCATCTCTTCCAATCGGTAACAATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

Coding sequence (CDS)

ATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

Protein sequence

MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIEEQINLLLELVPSWLISEHFMDQC

Homology

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BLAST of Carg16872 vs. NCBI nr
Match: XP_022963958.1 (CDT1-like protein b [Cucurbita moschata])

HSP 1 Score: 1042.3 bits (2694), Expect = 6.4e-301
Identity = 574/614 (93.49%), Postives = 575/614 (93.65%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AELTTRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELTTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKL EKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLTEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
            LSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 ILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETKIETESSSMPFSPVKLPS STCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAK XXXXXXXXXX   MAP              RSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKXXXXXXXXXXXXXXMAPPKRSSMSPDEDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 598

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_023553630.1 (CDT1-like protein b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1038.1 bits (2683), Expect = 1.2e-299
Identity = 586/614 (95.44%), Postives = 591/614 (96.25%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKV LSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVVLSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNE PSSRFKTSVDKSKKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKSKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLD KD+LETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDYKDDLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS S
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-S 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTV+GPSKQKELIGLSHFSPSFTR FSQKVNRE EKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVTGPSKQKELIGLSHFSPSFTRRFSQKVNRETEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETK+ETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKVETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGN+DIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIE 597

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 597

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_022967387.1 (CDT1-like protein b [Cucurbita maxima])

HSP 1 Score: 1020.4 bits (2637), Expect = 2.6e-294
Identity = 572/614 (93.16%), Postives = 585/614 (95.28%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AEL+TRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELSTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNE PSSRFKTSVDK KKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKYKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKV+IFDERTSCMKPDLHISFNF VLDNKD++ETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTV+GPSKQKEL+GLSHFSPSFTR FSQK +REMEKTGQA+K
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVTGPSKQKELMGLSHFSPSFTRRFSQKGSREMEKTGQASK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPF SDAETKIETESSSM FSPVKLPSNSTCNSNCPENYASPLRSSA PLPTTPSN
Sbjct: 361 RSDQIPFGSDAETKIETESSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSA 480
           MAARVA+TNED+PTAKTSDI+STPAKL  XXXXXXX TPAMAPXXXXXXXXXXXXXXRSA
Sbjct: 421 MAARVAITNEDEPTAKTSDIESTPAKLVSXXXXXXXSTPAMAPXXXXXXXXXXXXXXRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGN+DIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPEWI 598

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_022146049.1 (CDT1-like protein b [Momordica charantia])

HSP 1 Score: 699.9 bits (1805), Expect = 7.8e-198
Identity = 414/627 (66.03%), Postives = 473/627 (75.44%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASE  S  SSS+ F+SKKT  SNSKSLL DQQS+SS TPEKPAEL+TRTR+RKVALSI
Sbjct: 1   MDASETTS--SSSIRFRSKKTFHSNSKSLLPDQQSVSSMTPEKPAELSTRTRNRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVR+AAESVRESN+Q P D  T   KSVRRQIDSW +  P++R K+++DK  ++PEKF+
Sbjct: 61  KEVRKAAESVRESNKQQPPD-RTGMRKSVRRQIDSWPDVTPANRSKSAIDKPMEIPEKFQ 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
            LS FFDSLD  MRLLR +G+ASNFSN+CPKIE LTD                RRFSYGH
Sbjct: 121 ILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQ+KFI+PEAIELKKV +FDERTSCMKPDLHISFN  VLDN+++LETG+Q + LRKLF 
Sbjct: 181 LAQLKFILPEAIELKKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFC 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
            RLSEF SSHPEID+VPK LLP+PFN SSQDLF KTN LS V     + A EQPAISST+
Sbjct: 241 TRLSEFVSSHPEIDEVPKGLLPEPFNRSSQDLFRKTNSLSPV-----ETAPEQPAISSTN 300

Query: 301 VAE----DHSNENQGFRIIKSTM--TVSGPSKQKELIGLSHFSPSF-TRHFSQKVNREME 360
            AE    +HS E+ GFRI+KST+  TV  PSKQK LIG SHFS SF           E+E
Sbjct: 301 DAEGIPFNHSEESLGFRIVKSTVPRTVVDPSKQKNLIGASHFSQSFXXXXXXXXXXXEVE 360

Query: 361 KTGQAAKRSDQIPFCSDAETKIETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLR 420
           KT QA +   Q P  SDAET I+TE      SS P SPVKLPSNSTC+SN  ENYASP+R
Sbjct: 361 KTDQATRPCAQNPSHSDAETNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIR 420

Query: 421 SSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXX 480
            SA PLP+TP +MA R   TNED P+AKT+DI STPAKL          TPAM P     
Sbjct: 421 VSAPPLPSTPIDMAVRGTSTNEDYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSS 480

Query: 481 XXXXXXXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDDQ-KDLTRCASPDDDILDILPQS 540
                     SANKL+RRPPRSRSL+FDTPTKEDKN+D+  D T   S DDDILDILPQS
Sbjct: 481 RSPHDDSSW-SANKLIRRPPRSRSLIFDTPTKEDKNEDEIDDGTSSTSLDDDILDILPQS 540

Query: 541 LVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKII 600
           L+QSIREKERK+KEEQ PAISQAKRR+KMIA+LPKLFNAI+FLFHKRTVIT+EELI+KII
Sbjct: 541 LLQSIREKERKVKEEQTPAISQAKRRRKMIANLPKLFNAIYFLFHKRTVITKEELIFKII 600

Query: 601 VGNVDIVDKKEIEEQINLLLELVPSWL 615
            GNVDIVD++EIEEQ+ LLLELVP W+
Sbjct: 601 SGNVDIVDRREIEEQLALLLELVPEWI 602

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_008447443.1 (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo])

HSP 1 Score: 693.7 bits (1789), Expect = 5.6e-196
Identity = 411/616 (66.72%), Postives = 461/616 (74.84%), Query Frame = 0


Query: 2   DASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIK 61
           DAS  ISSPSS+LPFKSKK L SN KSLL+D QSLSSKTPEKPAE   RTR RKVALSIK
Sbjct: 3   DASHNISSPSSTLPFKSKKNLGSNFKSLLKDPQSLSSKTPEKPAE---RTRKRKVALSIK 62

Query: 62  EVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKLPEKFE 121
           EV+RAA+SV ESNRQLP DLTT+GSK VRRQ+DS SNE  SSR KT VD KS KLPEKFE
Sbjct: 63  EVKRAAQSVNESNRQLPHDLTTKGSKLVRRQMDSSSNESLSSRSKTCVDKKSNKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFFD LDS MRLLRFKGVASNFSNVC KIEVLTD                RRFSY H
Sbjct: 123 LLCKFFDCLDSAMRLLRFKGVASNFSNVCTKIEVLTD----------------RRFSYNH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ+KFI+PEAI LKKV++FDERTSCMKPDLHISFNF +L++K+     +QYMQLRKLF+
Sbjct: 183 LAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFDILESKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
            RLSEFASSHPEIDDVPKDLLP PFN  SQ+LFPKTN LSSVK  IEQL  EQP  S+  
Sbjct: 243 TRLSEFASSHPEIDDVPKDLLPNPFNFRSQNLFPKTNPLSSVKTSIEQLGPEQPMPSAEG 302

Query: 302 VAEDHS-NENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQA 361
           +  +H   ENQGFRIIKS  T  GP+K+KEL+GLSHFSPS +R FSQK V+REMEKT   
Sbjct: 303 LLSNHHLEENQGFRIIKS--TDHGPNKKKELLGLSHFSPSISRLFSQKVVDREMEKTH-- 362

Query: 362 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 421
                      +     ET S++ PFSP+KL SNST N +C E YASP+ SS LP+PTTP
Sbjct: 363 ----------VETNMDAETSSTTKPFSPIKLSSNSTSNLHCVEKYASPICSSTLPIPTTP 422

Query: 422 SNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXR 481
           SNM   V++  ED   AK +DI STPAK           TPA++                
Sbjct: 423 SNMVGIVSMRKEDGQYAKANDIDSTPAKFVSTPDRLMASTPAISAPKRSSMTPDDDFAY- 482

Query: 482 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERK 541
           S NKLVRRPPRSRSLVFDTPTKEDKN    D+    S DDDILD+L QSLVQSIREKERK
Sbjct: 483 STNKLVRRPPRSRSLVFDTPTKEDKNKVDTDV----SLDDDILDVLSQSLVQSIREKERK 542

Query: 542 IKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKE 601
           IKE+QMPAI+QAKRRQKMIA LPKLFNAIFFL+HKRTVI REEL+ KIIVG+VDI+D++E
Sbjct: 543 IKEDQMPAITQAKRRQKMIAGLPKLFNAIFFLYHKRTVIKREELLNKIIVGSVDILDRRE 575

Query: 602 IEEQINLLLELVPSWL 615
           IEEQ++LL ELVP W+
Sbjct: 603 IEEQLDLLFELVPEWI 575

[Close]

BLAST of Carg16872 vs. TAIR10
Match: AT2G31270.1 (homolog of yeast CDT1 A)

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-52
Identity = 193/625 (30.88%), Postives = 284/625 (45.44%), Query Frame = 0


Query: 7   ISSPSS--SLPFKSKKTL-----RSNSKSLLQDQQSLSSKTPEKPAE-LTTRTRSRKVAL 66
           +S+P S  S+PFKSKK L      S S++   +  S++  TPEKP E + +R+R+R VAL
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 67  SIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEK 126
           S+KE+R+AA                                      K      +KLPEK
Sbjct: 61  SVKEIRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEK------EKLPEK 120

Query: 127 FEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSY 186
           +E L KFF++LD+ M L + +G    FSN+  +IE LT+                RRF Y
Sbjct: 121 YENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTE----------------RRFCY 180

Query: 187 GHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKL 246
            HLAQ+K I+PEAIE+K+V+I DE T CMKPDLH++ N   ++  D  ++ ++ + LRK+
Sbjct: 181 SHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKV 240

Query: 247 FKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS 306
           F+ARL++F  +HP+ D+VP++ LP+PFN                + P+E    E   +S 
Sbjct: 241 FRARLADFVKAHPQGDEVPEEPLPEPFN---------------RRKPVENSNVEVKRVS- 300

Query: 307 TSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQA 366
            S+ E+ ++       I ++   S P        ++      T   ++  + ++      
Sbjct: 301 -SLMEEMAS-------IPASKLFSSP--------ITSTPVKTTSSLAKPTSSQIXXXXXX 360

Query: 367 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 426
                                          P                            
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 427 SNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXR 486
            ++AAR       +      DI + P                                  
Sbjct: 421 XSLAARP--LKRSNGHTNPDDISADP---------------------------------- 480

Query: 487 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKD-------LTRCASPDDDILDILPQSLVQS 546
              KLVR   RS SL FD+  ++++  D  D            S DD+IL ILP  L  +
Sbjct: 481 -PTKLVR---RSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLRHA 531

Query: 547 IREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFH--KRTVITREELIYKIIVG 606
           I+E+ERK  E+Q PAIS AKRR+KMIA LPKLFN I +L    +R VIT+EEL++KII G
Sbjct: 541 IKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAG 531

Query: 607 NVDIVDKKEIEEQINLLLELVPSWL 615
           + DI D+KE+EEQ+ LL E+VP W+
Sbjct: 601 HSDITDRKEVEEQLILLQEIVPEWM 531

[Close]

BLAST of Carg16872 vs. TAIR10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 139.0 bits (349), Expect = 9.6e-33
Identity = 150/530 (28.30%), Postives = 225/530 (42.45%), Query Frame = 0


Query: 87  KSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFS 146
           K+V+RQI S S+  P S          KLPE+FE L +FF+ LD+ +RLL+ KG ++ ++
Sbjct: 27  KTVKRQIFS-SSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSSTTYA 86

Query: 147 NVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSC 206
           N+CPKIE LT+                R FSY HLAQMK I PEAIELK+V+ F E T C
Sbjct: 87  NICPKIEYLTN----------------RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCC 146

Query: 207 MKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFN 266
           MKP LHI  N   +  +D +  G +YM+LRK+F ++L +F  +HP+ D++PK+LLP+PFN
Sbjct: 147 MKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFN 206

Query: 267 CSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSK 326
              +D +   + + SV     +L      +    + ++  + N   ++I  +        
Sbjct: 207 SPQRDSY---SGIVSVGLGEPKLEVGGFDVHMEEIEQEEQDVN---KVIPDST------- 266

Query: 327 QKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSP 386
                 LSH         S+ V   +                             +  +P
Sbjct: 267 ------LSHIE-------SRIVETPVXXXXXXXXXXXXXXXXXXXXXXXXLSKRCIELTP 326

Query: 387 VKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAK 446
                NS  ++N       P RS  L   T   +   +  + NE D      +       
Sbjct: 327 EGGDDNSLRSTNSLAR--GPSRS--LNFDTFEEDAIEKDDIGNESDDKGINYE------- 386

Query: 447 LXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDD 506
                                        XX                             
Sbjct: 387 ----------------------EDGLLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 446

Query: 507 QKDLTRCASPDDDILDILPQSLVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNA 566
                  AS DD        SL+QS+ E+ +   E+                +LP+L N 
Sbjct: 447 XXXXXXXASDDD--------SLLQSMIERPKTEPEKH---------------NLPQLVNL 447

Query: 567 IFFLFH--KRTVITREELIYKIIVGNVDIVDKKEIEEQINLLLELVPSWL 615
           I  +FH   RTVIT+EEL+YKII   ++I D++E+EEQ++L+L+LVP W+
Sbjct: 507 IHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWI 447

[Close]

BLAST of Carg16872 vs. Swiss-Prot
Match: sp|Q9SJW9|CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-51
Identity = 193/625 (30.88%), Postives = 284/625 (45.44%), Query Frame = 0


Query: 7   ISSPSS--SLPFKSKKTL-----RSNSKSLLQDQQSLSSKTPEKPAE-LTTRTRSRKVAL 66
           +S+P S  S+PFKSKK L      S S++   +  S++  TPEKP E + +R+R+R VAL
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 67  SIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEK 126
           S+KE+R+AA                                      K      +KLPEK
Sbjct: 61  SVKEIRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEK------EKLPEK 120

Query: 127 FEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSY 186
           +E L KFF++LD+ M L + +G    FSN+  +IE LT+                RRF Y
Sbjct: 121 YENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTE----------------RRFCY 180

Query: 187 GHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKL 246
            HLAQ+K I+PEAIE+K+V+I DE T CMKPDLH++ N   ++  D  ++ ++ + LRK+
Sbjct: 181 SHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKV 240

Query: 247 FKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS 306
           F+ARL++F  +HP+ D+VP++ LP+PFN                + P+E    E   +S 
Sbjct: 241 FRARLADFVKAHPQGDEVPEEPLPEPFN---------------RRKPVENSNVEVKRVS- 300

Query: 307 TSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQA 366
            S+ E+ ++       I ++   S P        ++      T   ++  + ++      
Sbjct: 301 -SLMEEMAS-------IPASKLFSSP--------ITSTPVKTTSSLAKPTSSQIXXXXXX 360

Query: 367 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 426
                                          P                            
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 427 SNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXR 486
            ++AAR       +      DI + P                                  
Sbjct: 421 XSLAARP--LKRSNGHTNPDDISADP---------------------------------- 480

Query: 487 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKD-------LTRCASPDDDILDILPQSLVQS 546
              KLVR   RS SL FD+  ++++  D  D            S DD+IL ILP  L  +
Sbjct: 481 -PTKLVR---RSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLRHA 531

Query: 547 IREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFH--KRTVITREELIYKIIVG 606
           I+E+ERK  E+Q PAIS AKRR+KMIA LPKLFN I +L    +R VIT+EEL++KII G
Sbjct: 541 IKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAG 531

Query: 607 NVDIVDKKEIEEQINLLLELVPSWL 615
           + DI D+KE+EEQ+ LL E+VP W+
Sbjct: 601 HSDITDRKEVEEQLILLQEIVPEWM 531

[Close]

BLAST of Carg16872 vs. Swiss-Prot
Match: sp|Q9M1S9|CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-31
Identity = 150/530 (28.30%), Postives = 225/530 (42.45%), Query Frame = 0


Query: 87  KSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFS 146
           K+V+RQI S S+  P S          KLPE+FE L +FF+ LD+ +RLL+ KG ++ ++
Sbjct: 27  KTVKRQIFS-SSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSSTTYA 86

Query: 147 NVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSC 206
           N+CPKIE LT+                R FSY HLAQMK I PEAIELK+V+ F E T C
Sbjct: 87  NICPKIEYLTN----------------RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCC 146

Query: 207 MKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFN 266
           MKP LHI  N   +  +D +  G +YM+LRK+F ++L +F  +HP+ D++PK+LLP+PFN
Sbjct: 147 MKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFN 206

Query: 267 CSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSK 326
              +D +   + + SV     +L      +    + ++  + N   ++I  +        
Sbjct: 207 SPQRDSY---SGIVSVGLGEPKLEVGGFDVHMEEIEQEEQDVN---KVIPDST------- 266

Query: 327 QKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSP 386
                 LSH         S+ V   +                             +  +P
Sbjct: 267 ------LSHIE-------SRIVETPVXXXXXXXXXXXXXXXXXXXXXXXXLSKRCIELTP 326

Query: 387 VKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAK 446
                NS  ++N       P RS  L   T   +   +  + NE D      +       
Sbjct: 327 EGGDDNSLRSTNSLAR--GPSRS--LNFDTFEEDAIEKDDIGNESDDKGINYE------- 386

Query: 447 LXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDD 506
                                        XX                             
Sbjct: 387 ----------------------EDGLLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 446

Query: 507 QKDLTRCASPDDDILDILPQSLVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNA 566
                  AS DD        SL+QS+ E+ +   E+                +LP+L N 
Sbjct: 447 XXXXXXXASDDD--------SLLQSMIERPKTEPEKH---------------NLPQLVNL 447

Query: 567 IFFLFH--KRTVITREELIYKIIVGNVDIVDKKEIEEQINLLLELVPSWL 615
           I  +FH   RTVIT+EEL+YKII   ++I D++E+EEQ++L+L+LVP W+
Sbjct: 507 IHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWI 447

[Close]

BLAST of Carg16872 vs. TrEMBL
Match: tr|A0A1S3BGW9|A0A1S3BGW9_CUCME (CDT1-like protein a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489888 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 3.7e-196
Identity = 411/616 (66.72%), Postives = 461/616 (74.84%), Query Frame = 0


Query: 2   DASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIK 61
           DAS  ISSPSS+LPFKSKK L SN KSLL+D QSLSSKTPEKPAE   RTR RKVALSIK
Sbjct: 3   DASHNISSPSSTLPFKSKKNLGSNFKSLLKDPQSLSSKTPEKPAE---RTRKRKVALSIK 62

Query: 62  EVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKLPEKFE 121
           EV+RAA+SV ESNRQLP DLTT+GSK VRRQ+DS SNE  SSR KT VD KS KLPEKFE
Sbjct: 63  EVKRAAQSVNESNRQLPHDLTTKGSKLVRRQMDSSSNESLSSRSKTCVDKKSNKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFFD LDS MRLLRFKGVASNFSNVC KIEVLTD                RRFSY H
Sbjct: 123 LLCKFFDCLDSAMRLLRFKGVASNFSNVCTKIEVLTD----------------RRFSYNH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ+KFI+PEAI LKKV++FDERTSCMKPDLHISFNF +L++K+     +QYMQLRKLF+
Sbjct: 183 LAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFDILESKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
            RLSEFASSHPEIDDVPKDLLP PFN  SQ+LFPKTN LSSVK  IEQL  EQP  S+  
Sbjct: 243 TRLSEFASSHPEIDDVPKDLLPNPFNFRSQNLFPKTNPLSSVKTSIEQLGPEQPMPSAEG 302

Query: 302 VAEDHS-NENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQA 361
           +  +H   ENQGFRIIKS  T  GP+K+KEL+GLSHFSPS +R FSQK V+REMEKT   
Sbjct: 303 LLSNHHLEENQGFRIIKS--TDHGPNKKKELLGLSHFSPSISRLFSQKVVDREMEKTH-- 362

Query: 362 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 421
                      +     ET S++ PFSP+KL SNST N +C E YASP+ SS LP+PTTP
Sbjct: 363 ----------VETNMDAETSSTTKPFSPIKLSSNSTSNLHCVEKYASPICSSTLPIPTTP 422

Query: 422 SNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXR 481
           SNM   V++  ED   AK +DI STPAK           TPA++                
Sbjct: 423 SNMVGIVSMRKEDGQYAKANDIDSTPAKFVSTPDRLMASTPAISAPKRSSMTPDDDFAY- 482

Query: 482 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERK 541
           S NKLVRRPPRSRSLVFDTPTKEDKN    D+    S DDDILD+L QSLVQSIREKERK
Sbjct: 483 STNKLVRRPPRSRSLVFDTPTKEDKNKVDTDV----SLDDDILDVLSQSLVQSIREKERK 542

Query: 542 IKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKE 601
           IKE+QMPAI+QAKRRQKMIA LPKLFNAIFFL+HKRTVI REEL+ KIIVG+VDI+D++E
Sbjct: 543 IKEDQMPAITQAKRRQKMIAGLPKLFNAIFFLYHKRTVIKREELLNKIIVGSVDILDRRE 575

Query: 602 IEEQINLLLELVPSWL 615
           IEEQ++LL ELVP W+
Sbjct: 603 IEEQLDLLFELVPEWI 575

[Close]

BLAST of Carg16872 vs. TrEMBL
Match: tr|A0A1S3CEP6|A0A1S3CEP6_CUCME (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.0e-194
Identity = 403/621 (64.90%), Postives = 464/621 (74.72%), Query Frame = 0


Query: 2   DASEKISSPSSS-LPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 61
           DAS+KISS SSS LPFK KK L SN KSLL+D QSLSSKTPEKPAEL+TR+R+RKVALSI
Sbjct: 3   DASKKISSSSSSTLPFKLKKPLCSNFKSLLEDSQSLSSKTPEKPAELSTRSRNRKVALSI 62

Query: 62  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 121
           KEV++AA+SVRESNRQLP DL TE  KSVRRQIDSWSNE  S       +KS+KLPEKFE
Sbjct: 63  KEVKQAAKSVRESNRQLPLDLATEERKSVRRQIDSWSNESQSVE-----NKSRKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFF SLDS MRLLR KGVASNFSNVCPK+E LTD                RRFSYGH
Sbjct: 123 MLCKFFYSLDSAMRLLRCKGVASNFSNVCPKVEALTD----------------RRFSYGH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ KFI+PEAI LKKV+++DE+T CMKPDLHISFNF+VL+NK+     +QYMQLRKLF+
Sbjct: 183 LAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
           ARLSEF SS+PE  DVPKDLLP PFN  SQDL  K+N LSS+K  IEQLA EQP  S   
Sbjct: 243 ARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEG 302

Query: 302 VA-EDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQA 361
           +    HS ENQGFRI+KSTM++SG SKQKE  GLSHFSPSF+R FSQK V+RE+    Q 
Sbjct: 303 ICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAINDQV 362

Query: 362 AKRSDQIPFCSDAETKIETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALP 421
              S+Q+  C+D ET I+TE     SS+ PFSP+K+PSNSTCN +C ENYASPLRS AL 
Sbjct: 363 TTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLALA 422

Query: 422 LPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXX 481
           LPTTPSN   RV +  E D +AK +DI STP KL          TPAM P          
Sbjct: 423 LPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTPDD 482

Query: 482 XXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIR 541
                S NKLVRRPPRSRSLVFDTPTKE KN+D++D+    S ++DI D+L  SLVQSIR
Sbjct: 483 DPSF-STNKLVRRPPRSRSLVFDTPTKEYKNNDERDV----SLENDIGDVLSPSLVQSIR 542

Query: 542 EKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDI 601
           EKERK+KEEQMPAI+QAKRRQ+MIA+LPKLFNAIFFL+HKRTVI R+EL +KII  +   
Sbjct: 543 EKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASS--- 588

Query: 602 VDKKEIEEQINLLLELVPSWL 615
            DK+EIEEQ++LL EL P W+
Sbjct: 603 -DKREIEEQLDLLFELAPEWI 588

[Close]

BLAST of Carg16872 vs. TrEMBL
Match: tr|A0A0A0L7I7|A0A0A0L7I7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G394670 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.1e-187
Identity = 394/615 (64.07%), Postives = 448/615 (72.85%), Query Frame = 0


Query: 2   DASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIK 61
           DAS KISS SS+LPFKSKK L SNS SLL+D QSLSS+TPEKP E   R R RKVALSIK
Sbjct: 3   DASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQSLSSRTPEKPVE---RNRKRKVALSIK 62

Query: 62  EVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKLPEKFE 121
           EV++AA+SV ESNRQL  DLTT GSK VRRQ+DSWSNE  SSR KT VD KS KLPEKFE
Sbjct: 63  EVKQAAQSVHESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSRSKTCVDNKSNKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFFD LDS MRLLRFKGVASNFS+VC KIEVLTD                RRFSY H
Sbjct: 123 LLCKFFDCLDSAMRLLRFKGVASNFSSVCTKIEVLTD----------------RRFSYSH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ+KFI+PEAI LKKV++F   TSCMKPDLHISFNF VL++K+     +QYMQLRKLF+
Sbjct: 183 LAQLKFILPEAIMLKKVVVFYGLTSCMKPDLHISFNFGVLESKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
            RLSEF SSHPEIDD+PKD LP PFN  S +LFP+TN LSSVK  IEQLA EQP  S+  
Sbjct: 243 TRLSEFVSSHPEIDDIPKDSLPNPFNFRSLNLFPETNSLSSVKTSIEQLAPEQPLPSAED 302

Query: 302 VAEDHSNE-NQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAA 361
           +  +H +E NQGFRIIKSTMT  GP+KQKEL GLSHFSP  +R FSQK      +T  A 
Sbjct: 303 IPSNHHSENNQGFRIIKSTMTGHGPNKQKELFGLSHFSP-VSRLFSQKAVNIDVQTFDA- 362

Query: 362 KRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPS 421
                              SS+ P SP+KL SNST N +C ENYASP+ SS+LP PTTPS
Sbjct: 363 -------------------SSTKPSSPIKLSSNSTSNLHCLENYASPICSSSLPNPTTPS 422

Query: 422 NMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXXXXXXXXXXXRS 481
           NM   V +  ED  +AK +DI STP K           TPAMAP               S
Sbjct: 423 NMVGIVTMRKEDGQSAKVNDIDSTPVKFVSTSDQLMASTPAMAPPKRSSMTPDDDFSY-S 482

Query: 482 ANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKI 541
            NKLVRRPPRSRSLVFDTPTKEDKN D+ D+    S D+DILD+L +SLVQSIREKERKI
Sbjct: 483 TNKLVRRPPRSRSLVFDTPTKEDKNKDEIDV----SLDNDILDVLSESLVQSIREKERKI 542

Query: 542 KEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEI 601
           KEEQMPAI+QAKRRQK+IA+LPKLFNAIFFL+HKRTV+ REEL+ KII G+VDI+D++E+
Sbjct: 543 KEEQMPAITQAKRRQKLIANLPKLFNAIFFLYHKRTVVKREELLNKIITGSVDILDRREV 567

Query: 602 EEQINLLLELVPSWL 615
           EEQ++LL ELVP W+
Sbjct: 603 EEQLDLLFELVPDWI 567

[Close]

BLAST of Carg16872 vs. TrEMBL
Match: tr|A0A1S3C211|A0A1S3C211_CUCME (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 396/626 (63.26%), Postives = 453/626 (72.36%), Query Frame = 0


Query: 2   DASEKI-----SSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKV 61
           DAS+KI           LPFKSKK LRSNSKSLL+D QSLSSKT                
Sbjct: 3   DASKKIXXXXXXXXXXXLPFKSKKPLRSNSKSLLEDPQSLSSKTXXXXXXXXXXXXXXXX 62

Query: 62  ALSIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKL 121
               KEV+RAA SV +SNRQLP  L  E SKSVRRQID WSNE        SVD KSKK 
Sbjct: 63  XXXXKEVKRAALSVTQSNRQLPLHLAIEESKSVRRQIDLWSNE------SQSVDNKSKKF 122

Query: 122 PEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRR 181
           PEKFE L KFF SLDS MRLLRFKGVASNFSNVCPKIE LTD                RR
Sbjct: 123 PEKFEMLCKFFYSLDSAMRLLRFKGVASNFSNVCPKIEALTD----------------RR 182

Query: 182 FSYGHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQL 241
           F+YGHLAQ KFI+ EAI LKKV+++DERT CMKPDLHISFNF V +N++     +QYMQL
Sbjct: 183 FTYGHLAQFKFILREAIVLKKVLVYDERTCCMKPDLHISFNFGVPENQE-----DQYMQL 242

Query: 242 RKLFKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPA 301
           RKLF+ARLSEF SS+PE DDVPKDLLP PFN  SQDL  K+N LSS+K  IEQLA EQP 
Sbjct: 243 RKLFRARLSEFVSSYPETDDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPM 302

Query: 302 ISSTSVA-EDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREME 361
            S   ++   HS E+QGFR++KSTM V+ PSKQKE IGLSHFSPSF+R FSQK V+RE+ 
Sbjct: 303 PSIEGISFNHHSEEHQGFRMVKSTMPVTDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIA 362

Query: 362 KTGQAAKRSDQIPFCSDAETKIETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLR 421
              Q  K S+Q+   +D ET I+ E     SS+ PFSP+KLPSNSTCN NC +NYASP+R
Sbjct: 363 NNDQVTKPSNQVSSYTDVETNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIR 422

Query: 422 SSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPXXXXX 481
            SAL LPTTPSN   RV +  E D +AK +DI STP KL          TPAM PXXXXX
Sbjct: 423 CSALALPTTPSNTVGRVTMMVECDQSAKANDIDSTPGKLLSTPTQLMTNTPAM-PXXXXX 482

Query: 482 XXXXXXXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSL 541
           XXXXXXXXX S NKLVRRPPRSRSLVFDTPTKEDKN+D+ D+    S +DDILD+L  SL
Sbjct: 483 XXXXXXXXXXSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDV----SLEDDILDVLSSSL 542

Query: 542 VQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIV 601
           VQSI+EKERK+KEEQMPAI+QAKRRQKMIA+LPKLFNAIFFL+HKRTVI +++L+ +II 
Sbjct: 543 VQSIKEKERKVKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIA 592

Query: 602 GNVDIVDKKEIEEQINLLLELVPSWL 615
           G+    DK+EIEEQ++LL EL P W+
Sbjct: 603 GS----DKREIEEQLDLLFELAPEWI 592

[Close]

BLAST of Carg16872 vs. TrEMBL
Match: tr|A0A2I4F6Q2|A0A2I4F6Q2_9ROSI (CDT1-like protein a, chloroplastic OS=Juglans regia OX=51240 GN=LOC108996045 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.1e-104
Identity = 271/632 (42.88%), Postives = 366/632 (57.91%), Query Frame = 0


Query: 9   SPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTR-TRSRKVALSIKEVRRAA 68
           S +SS+PFKSKK L  +      +   LSSKTPEKP +L  R +R+R VALSI EVRR A
Sbjct: 4   SGASSIPFKSKKPLLHSKP---PNTNQLSSKTPEKPTQLPRRSSRNRGVALSINEVRRVA 63

Query: 69  ESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFD 128
           ES+ +++R    D +    KS RRQI+SW  E P+ + K       KLPEKFE L++FFD
Sbjct: 64  ESLHDTDRP---DRSGLRPKSARRQIESWPAESPTRKPKKPAGGPFKLPEKFENLAEFFD 123

Query: 129 SLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFI 188
           SLDS +RLLR KG A+NF+N+CPKIE LTD                RRFSY HLAQ+KFI
Sbjct: 124 SLDSSIRLLRLKGSATNFTNICPKIECLTD----------------RRFSYSHLAQLKFI 183

Query: 189 VPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFA 248
           + +A E+K+V++FDERTSCMKPDLH+S N   +++   L++ ++ M LRK+F+ARL++F+
Sbjct: 184 LRDAFEIKRVLVFDERTSCMKPDLHVSINVDAIEDNAKLKSESRNMYLRKVFRARLADFS 243

Query: 249 SSHPEIDDVPKDLLPKPFNCSSQDL------FPKTNFLSSVKAPIEQLAAEQPAISSTSV 308
            SHPE+D++P+++LP+PFN +  ++       P ++F   ++  I+ L A Q A+S T +
Sbjct: 244 KSHPEVDEIPEEMLPEPFNRTKTEIHSNMREVPTSSF--PIRTSIDALTARQSAVSKTCI 303

Query: 309 AEDHSN---------ENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVN-RE 368
             D  +                                    H   SF + FS+KV   E
Sbjct: 304 RGDEISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPQSFRKSFSRKVTCNE 363

Query: 369 MEKTG-QAAKRSDQ-----IPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYAS 428
            E T     K S Q     +P      +  + E++    SP KL  +   N    +N A 
Sbjct: 364 AENTSPNLLKASFQPSVLPVPEFLPYRSSTKEETAGAGPSPAKLSIDQASNG---KNVAF 423

Query: 429 PLRSSAL-PLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLXXXXXXXXXXTPAMAPX 488
              S+   P P TPS +    A+ N +    + S+  STPAKL          TP + P 
Sbjct: 424 CAASAHFTPSPATPSKVLD--AMNNGNGSPTEISNRDSTPAKLAYTPVRLMNVTPTLQPP 483

Query: 489 XXXXXXXXXXXXXRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDIL 548
                         S  KLVRR PRSRSL FDTP K + ++D+ D     S D DI DIL
Sbjct: 484 KRCYMSPENDCTG-SPQKLVRRLPRSRSLKFDTPEKNENSEDKIDDVGGVSVDSDIFDIL 543

Query: 549 PQSLVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFH--KRTVITREEL 608
           P++L+QSIREKER   EEQ PAIS AKRR+KMIASLPKLFN I FLF   K++VIT+EEL
Sbjct: 544 PENLLQSIREKERITMEEQNPAISYAKRRRKMIASLPKLFNMIHFLFQSTKQSVITKEEL 603

Query: 609 IYKIIVGNVDIVDKKEIEEQINLLLELVPSWL 615
           I+KII  + DIVD++E+EE+++LLLELVP W+
Sbjct: 604 IHKIITSHCDIVDRREVEEKLSLLLELVPEWI 605

The following BLAST results are available for this feature:

BLAST of Carg16872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963958.1	6.4e-301	93.49	CDT1-like protein b [Cucurbita moschata]	[more]
XP_023553630.1	1.2e-299	95.44	CDT1-like protein b [Cucurbita pepo subsp. pepo]	[more]
XP_022967387.1	2.6e-294	93.16	CDT1-like protein b [Cucurbita maxima]	[more]
XP_022146049.1	7.8e-198	66.03	CDT1-like protein b [Momordica charantia]	[more]
XP_008447443.1	5.6e-196	66.72	PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]	[more]

BLAST of Carg16872 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31270.1	1.1e-52	30.88	homolog of yeast CDT1 A	[more]
AT3G54710.1	9.6e-33	28.30	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

BLAST of Carg16872 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJW9\|CDT1A_ARATH	2.0e-51	30.88	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
sp\|Q9M1S9\|CDT1B_ARATH	1.7e-31	28.30	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of Carg16872 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGW9\|A0A1S3BGW9_CUCME	3.7e-196	66.72	CDT1-like protein a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489888 PE=4 ...	[more]
tr\|A0A1S3CEP6\|A0A1S3CEP6_CUCME	2.0e-194	64.90	CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=4 SV=1	[more]
tr\|A0A0A0L7I7\|A0A0A0L7I7_CUCSA	4.1e-187	64.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G394670 PE=4 SV=1	[more]
tr\|A0A1S3C211\|A0A1S3C211_CUCME	1.6e-178	63.26	CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=4 SV=1	[more]
tr\|A0A2I4F6Q2\|A0A2I4F6Q2_9ROSI	1.1e-104	42.88	CDT1-like protein a, chloroplastic OS=Juglans regia OX=51240 GN=LOC108996045 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR032054	Cdt1_C
IPR014939	CDT1_Gemini-bd-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16872-RA	Carg16872-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 115..263 e-value: 1.4E-16 score: 71.1
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 115..224 e-value: 2.0E-8 score: 34.6
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 525..614 e-value: 9.8E-17 score: 61.0
None	No IPR available	GENE3D	G3DSA:1.10.10.1420		coord: 516..622 e-value: 2.6E-15 score: 58.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..516
None	No IPR available	PANTHER	PTHR28637	FAMILY NOT NAMED	coord: 1..617
None	No IPR available	PANTHER	PTHR28637:SF5	CDT1-LIKE PROTEIN B	coord: 1..617
None	No IPR available	CDD	cd08767	Cdt1_c	coord: 518..618 e-value: 1.37093E-27 score: 107.368
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 107..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16872	Cla005989	Watermelon (97103) v1	carwmB0750
Carg16872	MELO3C012906	Melon (DHL92) v3.5.1	carmeB0744
Carg16872	ClCG07G000960	Watermelon (Charleston Gray)	carwcgB0730
Carg16872	CSPI03G22800	Wild cucumber (PI 183967)	carcpiB0786
Carg16872	CmoCh19G000940	Cucurbita moschata (Rifu)	carcmoB1021
Carg16872	Lsi05G010060	Bottle gourd (USVL1VR-Ls)	carlsiB689
Carg16872	Cp4.1LG15g00740	Cucurbita pepo (Zucchini)	carcpeB1057
Carg16872	CsGy3G021800	Cucumber (Gy14) v2	carcgybB0747
Carg16872	MELO3C012906.2	Melon (DHL92) v3.6.1	carmedB0757
Carg16872	CsaV3_3G022530	Cucumber (Chinese Long) v3	carcucB0789
Carg16872	Cla97C07G129240	Watermelon (97103) v2	carwmbB0788
Carg16872	Bhi05G000162	Wax gourd	carwgoB0888

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16872	Watermelon (97103) v2	carwmbB0787
Carg16872	Silver-seed gourd	carcarB262
Carg16872	Silver-seed gourd	carcarB272
Carg16872	Silver-seed gourd	carcarB599
Carg16872	Silver-seed gourd	carcarB600
Carg16872	Silver-seed gourd	carcarB601
Carg16872	Cucumber (Gy14) v2	carcgybB0745
Carg16872	Cucumber (Gy14) v1	carcgyB0841
Carg16872	Cucumber (Gy14) v1	carcgyB0849
Carg16872	Cucurbita maxima (Rimu)	carcmaB1052
Carg16872	Cucurbita maxima (Rimu)	carcmaB1049
Carg16872	Cucurbita maxima (Rimu)	carcmaB1051
Carg16872	Cucurbita moschata (Rifu)	carcmoB1023
Carg16872	Cucurbita moschata (Rifu)	carcmoB1025
Carg16872	Cucurbita pepo (Zucchini)	carcpeB1058
Carg16872	Cucurbita pepo (Zucchini)	carcpeB1060
Carg16872	Cucurbita pepo (Zucchini)	carcpeB1062
Carg16872	Wild cucumber (PI 183967)	carcpiB0783
Carg16872	Wild cucumber (PI 183967)	carcpiB0787
Carg16872	Cucumber (Chinese Long) v2	carcuB0766
Carg16872	Cucumber (Chinese Long) v2	carcuB0769
Carg16872	Cucumber (Chinese Long) v3	carcucB0786
Carg16872	Cucumber (Chinese Long) v3	carcucB0790
Carg16872	Bottle gourd (USVL1VR-Ls)	carlsiB687
Carg16872	Melon (DHL92) v3.5.1	carmeB0749
Carg16872	Melon (DHL92) v3.6.1	carmedB0760
Carg16872	Melon (DHL92) v3.6.1	carmedB0763
Carg16872	Watermelon (Charleston Gray)	carwcgB0728
Carg16872	Watermelon (97103) v1	carwmB0752
Carg16872	Watermelon (97103) v1	carwmB0753