Carg16690 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTAGAGTCGTGATCGGAACCATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTATAGTCGATCTCTCCTATTACGCTCTGCTCGTCCTCAACTATGGTCCGCCTCTCTTAGTTCTAGGGACCTAATTCTTCCAATTTCTTAAGAGTACGAACTTAAGATTAGCTTGTACATTTGCTTTTTTTCTTCACTTGTTTCTGCTGAGACGAATTTATTAGCTTGTAGAATAGAGTTATGCAGAGAATAGAGTATCTCTGGGATTCTTCTTTTCGGTTTGCCAGAATTACACAAAAGAGAATAAACACTTTGCCTAATTCTGAAGTTGGAATGATATGTTGTGGTAATATTTGTATGTTCATCTTTGGAATGGCAAATGTATATTTCATAAAGCTTTAAACCGTCAATTTACCTATCTGTTTATGTAGTTGTTGATGCTATTATGGAGCTACTTTTCTGTTGTTCTAACAAATCCGGGGTGTGTTCCACCGCCCCGTTGCCATCACTGTTTTGTTTGTAAGTTCTTCGATGTTTTCCTATAGAAGTTTACTATGATTCTAGCTGGTAAACAAGATATAAATACTGATTATGTTTTGTTTGGTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGGTAGGCACAACAAGATTATTGGCTTCCTTCTGATCTCTAGTTCCTTGTTTCCATGGTTCTCGTTGTGTTGGATGCTCTCTTTGGGCTTTCCCTTTTGGGTTTTCCCTCAAGGTTTTTAAAGTGCGTTTGCTGGAGAAGGGAACGAGTGCTAGCAAGGACGTCGGGCCCCGAAGGGGTGGATTGTGAGATCCCACATCGGGAGGAGAACGAAACATTTTTTTAGAAGGGTGTGGAAACCTTTACCTAGCAGATGCGTTTCAAAAATCTTAAAAGGAAGCCCGAAAGAGAAAGCCCAAAGAAGAGAATATCTACTAGTGGTGGGCTCGAGCTCTTACATATAATATCCGGTTCGAAAATAAATGATGCCTCTTATATAATCATGTATCGGTGGATCCTAGTTCTTCGGCATTTTGTCGTTGACATAACCTGACATCATAGATATTCTAAATGTTCTATAGAGATGTTTTCTGATTGCGTTATGGTTGCATCATTTCACTGCTCGTTTGTCTTTATGATCTGTGTAAGACAAACGTTTTATCCTTTGAGTACTTGAAAATGTTTCTTCTTCTTGTTTCCATAGTTACAATACTTCAACATTCATCTCTAATTTTGGCTGCTTGTTCCATACAGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGGTAAGGCCATCTAGAAGTAGTATTTTGTTTGCTTTGCTTTTAAACATTTAACAGGGGCTGAATTGGTCTATTGGATATTTGATTCTCCATTGCTAGGTGTCACGGTCATGCTCATCCAAGGCGTATTGCCCATGGCTGCATGTCAAACCCCTTGTGTTGTACCACTTTGTTGTTTTCCTTCACCGTATTCATGATGTATAGTTTCCTTATAGTTTCGGAAAAATCATGTCTATGCTTGCTAGATTAAAAATGCCTTGGAATGTACTATAGGGGATGCGATTAGTCGTCAATTCTTCCTACCCGGAATTATATAGGATCTAAGTTGTTGTGTTGCCTTCTTTCCTTATATCCTATAACACTGCTTTCTTCATTTCTCTCAATCTTGCTTTCAAACTCTCTCTCTAAAATCTCTCTCCCCCTGTTTTCTAAAACCTTCTTAAAACAGGACCAGAAGCTTGAGTATACGTCACCCGACCGAAGGCGACACGATTTCGAGTTGGCTGACTCACTCCATGGTAAGAGTAAGTGCCGCACAACCGCTTGCAAGCATTTCGTAAGAGTGCGATTGTGACACAAGGCATACGAGAAGAAAACCACTAAAAAAAATGGCATCATGGCCTTGGTCGCCGAAGAATTTTGAGCTGGTATCTTCTTCACTACTCACTGGCCTCTTCCTTGCTGACATTCACTTATTCACTTATTGATGGTAGATCTCTCTGTTGGTAGCTAGACGCTAATTTTACCATATTGATGTCCATATTTAGTTACAAGCTACCCAAGTTTGTAGAGTTTGATTTGACTTGACTGAGCTATTTAGATTAGATTTGATTTGGTTATTTGGATTAGATTTAGTCATAATAGGGTTTATTATATATATTAGAATTTGATATTGGGATTTGAGAGAGTTTTGGGTGTCATCGTATTTGTTGAGTGACATATTGGTGAGAGTCTTTGCAGCGTGATAGTGAGGTATTCACTTGTAACACTTGGTTTATTAGTGATTGGTTGCTACTTGTGGATATAGGGGAACTTCTTCTCTCCGAACCATGTAAATATCTTGGTTGGTTGCTACTTGTGGATATAGGGGAACTTCTTCTCTACGAACCATGTAAATATCTTGGTGTCTCTTTGTGTAATTTCGTTCATTGGTGTTGTGAGTACATTTATTCCGCTTTGGACGCACAACAACTCTCTCACCAGCGTTTGCTTCCTCTAGTACTTACTCTACTGCTTTCAGCAGATGAAACTCCCCTATTTCTCATCTCTTGTAATATGCTGGAGTTCTTTTGCGTGTGATACTAAATAAATTCATGATTCAGGTGTTGAGAATGGATTAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA TATTAGAGTCGTGATCGGAACCATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA ATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA MFVKSGVWSPTVGYFFVSFFHFEFFSPNYSKMFLIGSEIRVPIIFAACFDTDFALSDFSSVRFARSGFRSSNVLQCVQILHGAGCLGFDYDPLCSRWKVCIETGPSLCVGRQSCWSKVLSVLPAIFVLNLPFAASVMSFLILHVSPVAVNTTRIKKYWFIAAASQDDLKQKHNLQGIEYPIRSDLNLLQEF
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922421.1 (uncharacterized protein LOC111430420 isoform X4 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922422.1 (uncharacterized protein LOC111430420 isoform X5 [Cucurbita moschata] >XP_022922423.1 uncharacterized protein LOC111430420 isoform X5 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922414.1 (uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922415.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922416.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922417.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922420.1 (uncharacterized protein LOC111430420 isoform X3 [Cucurbita moschata]) HSP 1 Score: 120.6 bits (301), Expect = 6.0e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922418.1 (uncharacterized protein LOC111430420 isoform X2 [Cucurbita moschata]) HSP 1 Score: 120.6 bits (301), Expect = 6.0e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. TAIR10
Match: AT3G60800.1 (DHHC-type zinc finger family protein) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of Carg16690 vs. TAIR10
Match: AT4G22750.2 (DHHC-type zinc finger family protein) HSP 1 Score: 45.8 bits (107), Expect = 3.4e-05 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. TAIR10
Match: AT4G00840.1 (DHHC-type zinc finger family protein) HSP 1 Score: 42.0 bits (97), Expect = 4.9e-04 Identity = 25/96 (26.04%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of Carg16690 vs. Swiss-Prot
Match: sp|Q8VYP5|ZDH14_ARATH (Probable protein S-acyltransferase 14 OS=Arabidopsis thaliana OX=3702 GN=PAT14 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of Carg16690 vs. Swiss-Prot
Match: sp|Q94C49|ZDH18_ARATH (Probable protein S-acyltransferase 13 OS=Arabidopsis thaliana OX=3702 GN=PAT13 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.1e-04 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. TrEMBL
Match: tr|A0A103XEG6|A0A103XEG6_CYNCS (Zinc finger, DHHC-type, palmitoyltransferase OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_008834 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13 Identity = 54/139 (38.85%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Carg16690 vs. TrEMBL
Match: tr|A0A0A0KP51|A0A0A0KP51_CUCSA (S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_5G158530 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.2e-13 Identity = 51/100 (51.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of Carg16690 vs. TrEMBL
Match: tr|A0A1S3ATX1|A0A1S3ATX1_CUCME (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103482661 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.7e-12 Identity = 49/100 (49.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Carg16690 vs. TrEMBL
Match: tr|B9N3M0|B9N3M0_POPTR (S-acyltransferase OS=Populus trichocarpa OX=3694 GN=POPTR_001G117100v3 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08 Identity = 51/154 (33.12%), Postives = 70/154 (45.45%), Query Frame = 0
BLAST of Carg16690 vs. TrEMBL
Match: tr|A0A0R0F2S0|A0A0R0F2S0_SOYBN (S-acyltransferase OS=Glycine max OX=3847 GN=100776675 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.2e-08 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |