Carg16683 (gene) Silver-seed gourd

Overview
NameCarg16683
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCucurbita_argyrosperma_scaffold_064 : 584253 .. 587751 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGAAAGGCTTATGGATATGGGCCTCTGAAGCCCACCGACCATCTATCGGTCTTAGCGTCTGTCATAGAATACCAAAAGGCCCGGCCTGATCCGTCGGCACTGTATCATCTTCTTCGGAATCAGACCCAAAAGGGGTCTTCCTCTTTCGCATTGGGTGCTCTGTTATCGAGTAGTAATGGCAGTCTCTTCTGCTCAGTGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTCTCAGGTTCTCCCTCTATTCCGATTAACAGTTCAAATTGATGCTATTCGCGACGCTTGCCTGATTTCGTTTTGGTTTTTTGAATTTTGCAAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTGAGTTTGCTATCCTTTCCTTCTCGTGATATCACTTACCTGTTTCACCGCTCGTTAATCACATATTGCTTCTGTTTTTTTATTCAAATTTTAAGGTCCATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCGATGGAAAAGTTCATAAAAGTCTACAAGCCAGGTAATTGTAGCGCTATTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTTGGAATCACATTCTTCAAAATTGAATATCCTATTAAATTATGGTGATATTAAACAATTGAAAATCTTGGACTTCATGACATCTATGCTTTTCAAGGATGAAGAAGTGGAAGTACACCGTTGTAGTACTTATTTTTTATGCTGAAATGGCTTGCTTTATTACTCTCAACTCCTACCTCATATGACGGCTATTTACACATCATGTTTCATCTATTTCCTTAATGAAATATTATCCTTTCACAGTTTGAAAAATCATGCGATATATTGCACGGAGTCAGGAGAGATTGACTTGAAATCCCTTCTTTTTGCGTAGTGTGCAGAAATGATCGAATATTACGACTGTTCTACTGAATACAGGAACTGCACTACTTTTCTTGGGCCCTTTGAATGTTTTTTCTTTTCCTTCAGTTGCTGAATTTTAGTGTTTGGAGTAACGTGGTCATATGTGATGTACCTATTTGTGAATATTTAGGCCTCTTGGATAGTGCTTTCATTTTTAGCTTTCTGCTTTTGTAATTATGTTTTTTTCTCACATTTTTTTAGTACGGTTTTCACCTTTCTTAAACAAATATTTGAATTTTCAGTAAAATTCAAAACGTTGACAGAAAGTTGATAACATCAAAGAACGTTATAGGTGAAAGTAGTGTTCTAAATTAAAAACAAAATTATTATCAAATAGATCTTAGTTATTTTTTTATATTTTCCATTCAAACCTTTGTTAGTGTTTGAAGGTGATTCCGATTCTACTGGTTGGTGCTTTCTGTATGAATGGCATCTGTTAGGATAACTAAAGTTTTAAGACAAATGCAAAGAGAAGGCGTTTCAGTTGCATCCTATCCTACTTGTATTCGTATGGCAGTCGATGCATTTTCTTCTATTCCTTGACATGCAGGACGTATAACACAAAGGCTACTCGTGCACAATTTCAGATGATGCCTGTAGGGACACTGCGGGGTGCCTTACAGAGTGACTGGCGTGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTAGTAAGTGATAGATCTAGTTATGTAATTTTGCTCCAACTAAGGCTGAGAGAAATCTTAGATTGACATTATGGGACTCACCGCCATGACACATGAGTTTCAATGGCTTCAATTAATTCATCACAAATTTACTATTAACATCAGTGTAAAACGATTCACAGTAGAATGCTGCTGCTGCAGGTTTTATCATTCTGTTACTTCATTTCCTTTTTCTTTCCTGTCCAATTATACCGAAGTAAACTTCTTTTAGCTAGGAGCTATGAATGTCAAAATCAACTTTAAAAAAAAAAAAAAAAAAAAAGAGAGAATAGAATGTACTGATTTTTTATAATCTCGGCTTTCTTCTTGTGTTCAGTATCGAGAACGAGTTGTCTTCATTGGGCAGAACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATGTGAGTTCAGCATATACATATCTTCTATTGGGACGAGGTTCATCGTAATTATCTGTTATATTTTCCTTCTCTTCTGGTTATATTCTAATGGTTCGTTTAGCATTATTTTCCTAATGAAACCATGCATCTTTGCATCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGTTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTGTGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGTCAAACAAAATTTAGTGTCGTAAGGCAGTAGGTGTTGCTCAAACTATGACTTCGGAATTTGTAGGGAGTTCTTCAGTATGGTAAAAGTGACCCCTATTTTTCAGCCGGTTAAATCATTTTAACTCCATCCAGAAATATTTTTTTGTGACTTGATAAACAAATCTCAACCCTTTATTTGCATCCAATAAACTTGGAAATGCTCATTACTTGTGCCTGGCTGCCCCCAATGTACGGATTTTATGGAATTTTCATGCTCTTAGTGAAAAACTCTCCCCGCTTGTGAGCCTCCTTCTATCTGTGTGGTTGAACCTACTTTCTGGTTTCTTCGCTTTTCTCTTATAAATCAAACCACACATTTCCTTGTTTAGGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGGTATATCATTAATTTGTTATATAATGTCATGCAAATTGATCACATATGCCTGTCTTAAGTTTTGAATATTTTGTTCTGATACATTTTTGTTTGAAAATCCTTTTGGCAGGCTGATGACATTCGAAATGAAGCAAATGAGCTCTTGAGAATCAGGGATTATCTTTATGATGAGCTTTCTAAAAAAAGAGGCCAGCCTGTTTAAAAGGTCAGTTCGTCCACACCTTAGCAAACATATAGCATATCTTTATTCATAATGAAACATATTAGCAGGGAGATGACCAACACGGTTTCTTGTTTATGAAACTTGATTTTCTACGATCATGCAAAATTATCACATTCATAGTTCACTCATGTCAAGTTTGAAACTTATCTCATATTAAAGTTGAAATGATTCTGAGGAATGCAACCTTAATTTAGAGACCTTGTCAATGGATAAATGCAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCTCAGCAAGCTCTTGATTATGGACTCATAGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCACTCATTTCGTATCTATTATTGTGTCCACTTTGACCAAATTTCATATATGAAACATATTAAAAATGGTTCACATTATATCAAACTATTC

mRNA sequence

AATTGAAAGGCTTATGGATATGGGCCTCTGAAGCCCACCGACCATCTATCGGTCTTAGCGTCTGTCATAGAATACCAAAAGGCCCGGCCTGATCCGTCGGCACTGTATCATCTTCTTCGGAATCAGACCCAAAAGGGGTCTTCCTCTTTCGCATTGGGTGCTCTGTTATCGAGTAGTAATGGCAGTCTCTTCTGCTCAGTGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTCTCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCGATGGAAAAGTTCATAAAAGTCTACAAGCCAGTATCGAGAACGAGTTGTCTTCATTGGGCAGAACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATAGTTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTGTGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCTCAGCAAGCTCTTGATTATGGACTCATAGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCACTCATTTCGTATCTATTATTGTGTCCACTTTGACCAAATTTCATATATGAAACATATTAAAAATGGTTCACATTATATCAAACTATTC

Coding sequence (CDS)

ATGGCAGTCTCTTCTGCTCAGTGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTCTCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCGATGGAAAAGTTCATAAAAGTCTACAAGCCAGTATCGAGAACGAGTTGTCTTCATTGGGCAGAACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATAGTTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTGTGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCTCAGCAAGCTCTTGATTATGGACTCATAGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCACTCATTTCGTATCTATTATTGTGTCCACTTTGACCAAATTTCATATATGAAACATATTAAAAATGGTTCACATTATATCAAACTATTC

Protein sequence

MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGDSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKDPESENFLKSKRLICNFHSFRIYYCVHFDQISYMKHIKNGSHYIKLF
Homology
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BLAST of Carg16683 vs. NCBI nr
Match: XP_023551138.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 8.8e-60
Identity = 149/261 (57.09%), Postives = 159/261 (60.92%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAVSSAQ LQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNIT EF GKVHKS  + 
Sbjct: 1   MAVSSAQFLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITAEFYGKVHKSFTSQ 60

Query: 61  IENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG--------------- 120
               +  +G+ + +  +        + T ++  KKLYMYI  P                 
Sbjct: 61  YRERVVFIGQNIDEEFS-----NQILATIIETSKKLYMYIFWPRWRCEFSIYISFIGTRF 120

Query: 121 ------------DSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIAL 180
                        SLQSPVATHCVG AYNLA FLLAAGEK       GNRSAMPLSRIAL
Sbjct: 121 FLTPSMAIYDTMQSLQSPVATHCVGYAYNLAVFLLAAGEK-------GNRSAMPLSRIAL 180

Query: 181 QPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALD 203
           QPPSGAARGQ                                I KDMNRMKRFTAQQALD
Sbjct: 181 QPPSGAARGQTDEIRNEANELLRIRDYLYDELSKKTGQPVEKINKDMNRMKRFTAQQALD 240

[Close]
BLAST of Carg16683 vs. NCBI nr
Match: XP_022158384.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 5.9e-56
Identity = 143/286 (50.00%), Postives = 162/286 (56.64%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAVSS+ CLQPQI VSQP LS ATK++SGLKLQSA PFGGAKPN+T EF GKVHKSL + 
Sbjct: 1   MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSR 60

Query: 61  IENELSSLGRTLMKSLA----------------IKFWPQYY------------------- 120
             N+ ++  +  M  +                 +  W   Y                   
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 -----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  KKLYMYINGPGGD            SL+SPVATHCVG AYNLAAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ------------------------- 203
           AAGEK       GNR AMPLSRIALQ P+GAARGQ                         
Sbjct: 181 AAGEK-------GNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKK 240

[Close]
BLAST of Carg16683 vs. NCBI nr
Match: XP_008437161.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 2.7e-53
Identity = 138/286 (48.25%), Postives = 156/286 (54.55%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAVSS  C QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EF GKVHKSLQA 
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  IENELSSLGRTLMKSLA----------------IKFWPQYY------------------- 120
             N+ ++  +  M  +                 +  W   Y                   
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 -----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  +K YMYINGPGGD            SL SPVATHCVG AYN+AAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ------------------------- 203
           AAGEK       GNR AMPLSRIALQ P+G+ARGQ                         
Sbjct: 181 AAGEK-------GNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKK 240

[Close]
BLAST of Carg16683 vs. NCBI nr
Match: XP_004147568.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis sativus] >KGN50188.1 hypothetical protein Csa_5G157950 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 1.8e-52
Identity = 137/286 (47.90%), Postives = 160/286 (55.94%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAV+S  CLQPQI VSQPSLSVATKV++GLK QSASPFGGAKPNIT EF GKVHKSLQ  
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 61  IENELSSLGRTLMKSLA----------------IKFWPQYY------------------- 120
             N+ ++  +  M  +                 +  W   Y                   
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 121 -----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  KKLY+YINGPGGD            SL+SP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG-------------------------- 203
           AAGEK       GNRSAMPLSRIALQ P+G+ARG                          
Sbjct: 181 AAGEK-------GNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKK 240

[Close]
BLAST of Carg16683 vs. NCBI nr
Match: XP_022957748.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 3.7e-50
Identity = 135/286 (47.20%), Postives = 156/286 (54.55%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MA SS  C QPQI  SQ  LS ATKV+SGLKLQSASPFGGAKPN+T EF GKVHKSLQ+S
Sbjct: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60

Query: 61  IENELSS----------------------------------------LGRTLMKSLAIKF 120
             N+ +S                                        +G+ + +  + + 
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 WPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  K LYMYINGPGGD            SL+S V THCVG AY+LAAFLL
Sbjct: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG-------------------------- 203
           AAGEK       G+R+AMPLSRIALQ P GAARG                          
Sbjct: 181 AAGEK-------GHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKK 240

[Close]
BLAST of Carg16683 vs. TAIR10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2)

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 104/270 (38.52%), Postives = 134/270 (49.63%), Query Frame = 0 

Query: 17  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ---------------- 76
           QPSL  S + K++SGLK QSAS       N+  EF G+V+KSLQ                
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTGKASRSRVKMMPI 70

Query: 77  ----------------------ASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKL 136
                                 A     +  +G+ + +  + +       L  L   +++
Sbjct: 71  GTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRI 130

Query: 137 YMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRS 196
           YMY+NGPGGD            SL+SPV THCVG AYNLA FLLAAGEK       G+R 
Sbjct: 131 YMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEK-------GHRF 190

Query: 197 AMPLSRIALQPPSGAARGQ--------------------------------IIKDMNRMK 203
           AMPLSRIALQ P+GAARGQ                                + KD++R+K
Sbjct: 191 AMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVK 250

[Close]
BLAST of Carg16683 vs. TAIR10
Match: AT4G17040.1 (CLP protease R subunit 4)

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09
Identity = 58/225 (25.78%), Postives = 86/225 (38.22%), Query Frame = 0 

Query: 30  LKLQSASPFGGAKPNITTEFDGKVHKSLQASI-----ENELSSLGRTLMKSLAIKFWPQY 89
           L   S+ P  G    +     G  H+     +     +N +  LG +L+ S+      ++
Sbjct: 75  LNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEF 134

Query: 90  YILTALKLPKKLYMYINGPG----GDSL----------------QSPVATHCVGCAYNLA 149
             L      K +Y+YIN  G    G+ L                + P+ T CVG A+  A
Sbjct: 135 LYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEA 194

Query: 150 AFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG---------------------- 198
           A LL AG K       GNRSA+P S I ++ P    +G                      
Sbjct: 195 ALLLTAGAK-------GNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKL 254

[Close]
BLAST of Carg16683 vs. TAIR10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 94  KKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIG 153
           K ++MY+N PGG         D++Q   SP++T C+G A ++A+ LLAAG K       G
Sbjct: 87  KPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAK-------G 146

Query: 154 NRSAMPLSRIALQPPSGAARGQ 164
            R ++P + + +  PSG   GQ
Sbjct: 147 QRRSLPNATVMIHQPSGGYSGQ 161

[Close]
BLAST of Carg16683 vs. Swiss-Prot
Match: sp|Q9XJ36|CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.0e-36
Identity = 104/270 (38.52%), Postives = 134/270 (49.63%), Query Frame = 0 

Query: 17  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ---------------- 76
           QPSL  S + K++SGLK QSAS       N+  EF G+V+KSLQ                
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTGKASRSRVKMMPI 70

Query: 77  ----------------------ASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKL 136
                                 A     +  +G+ + +  + +       L  L   +++
Sbjct: 71  GTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRI 130

Query: 137 YMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRS 196
           YMY+NGPGGD            SL+SPV THCVG AYNLA FLLAAGEK       G+R 
Sbjct: 131 YMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEK-------GHRF 190

Query: 197 AMPLSRIALQPPSGAARGQ--------------------------------IIKDMNRMK 203
           AMPLSRIALQ P+GAARGQ                                + KD++R+K
Sbjct: 191 AMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVK 250

[Close]
BLAST of Carg16683 vs. Swiss-Prot
Match: sp|Q8YP43|CLPP3_NOSS1 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 0 

Query: 68  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATH 127
           LGR +   +A +       L +    K +Y+YIN PGG         D++Q   S V T 
Sbjct: 35  LGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTI 94

Query: 128 CVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ------------ 187
           CVG A ++ +FLLAAG K       G R A+P SRI +  PSG  RGQ            
Sbjct: 95  CVGLAASMGSFLLAAGTK-------GKRMALPHSRIMIHQPSGGTRGQATDIEIEAREIL 154

Query: 188 --------------------IIKDMNRMKRFTAQQALDYGLIDRIV 190
                               I KDM+R    +AQ+A++YGLIDR++
Sbjct: 155 RIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSAQEAMEYGLIDRVI 193

[Close]
BLAST of Carg16683 vs. Swiss-Prot
Match: sp|Q3MDK7|CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.2e-11
Identity = 56/166 (33.73%), Postives = 75/166 (45.18%), Query Frame = 0 

Query: 68  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATH 127
           LGR +   +A +       L +    K +Y+YIN PGG         D++Q   S V T 
Sbjct: 35  LGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTI 94

Query: 128 CVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ------------ 187
           CVG A ++ +FLLAAG K       G R A+P SRI +  PSG  RGQ            
Sbjct: 95  CVGLAASMGSFLLAAGTK-------GKRLALPHSRIMIHQPSGGTRGQATDIEIEAREIL 154

Query: 188 --------------------IIKDMNRMKRFTAQQALDYGLIDRIV 190
                               I KDM+R    +AQ+A +YGLIDR++
Sbjct: 155 RIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSAQEAKEYGLIDRVI 193

[Close]
BLAST of Carg16683 vs. Swiss-Prot
Match: sp|A1BI15|CLPP_CHLPD (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=clpP PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-10
Identity = 62/230 (26.96%), Postives = 99/230 (43.04%), Query Frame = 0 

Query: 23  ATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKS---LQASIENELSSLGRTLMKSLAIK 82
           A K++SG   Q  +   G+   +  E  G+  ++       +   +  LG  + + +A  
Sbjct: 12  ARKLYSGAIEQGIT---GSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGL 71

Query: 83  FWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFL 142
              Q   L +    + +Y+Y+N PGG         D++Q     V+T CVG A ++ AFL
Sbjct: 72  IMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFL 131

Query: 143 LAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG------------------------- 202
           LA+G K       G R+++P SRI +  PSG A+G                         
Sbjct: 132 LASGTK-------GKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEILAS 191

Query: 203 -------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKDPES 206
                  Q+ +D  R +   AQ+AL+YG+ID+I      K   P K+ ES
Sbjct: 192 HTGKDVQQVREDSERDRWMNAQEALEYGIIDQIFE----KRPKPDKEKES 227

[Close]
BLAST of Carg16683 vs. Swiss-Prot
Match: sp|B9DJL4|CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) OX=396513 GN=clpP PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-10
Identity = 52/192 (27.08%), Postives = 81/192 (42.19%), Query Frame = 0 

Query: 46  TTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG 105
           TT    + +      +++ +  LG  +  ++A     Q   L A    K +Y+YIN PGG
Sbjct: 10  TTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGG 69

Query: 106 ---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIAL 165
                    D++Q     V T C+G A ++ +FLLAAG K       G R A+P + + +
Sbjct: 70  SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAK-------GKRFALPNAEVMI 129

Query: 166 QPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALD 194
             P G A+G                                QI KD +R    TA +A +
Sbjct: 130 HQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKE 189

[Close]
BLAST of Carg16683 vs. TrEMBL
Match: tr|A0A1S3ATH1|A0A1S3ATH1_CUCME (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103482668 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 138/286 (48.25%), Postives = 156/286 (54.55%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAVSS  C QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EF GKVHKSLQA 
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  IENELSSLGRTLMKSLA----------------IKFWPQYY------------------- 120
             N+ ++  +  M  +                 +  W   Y                   
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 -----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  +K YMYINGPGGD            SL SPVATHCVG AYN+AAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ------------------------- 203
           AAGEK       GNR AMPLSRIALQ P+G+ARGQ                         
Sbjct: 181 AAGEK-------GNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKK 240

[Close]
BLAST of Carg16683 vs. TrEMBL
Match: tr|A0A0A0KKQ7|A0A0A0KKQ7_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_5G157950 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 137/286 (47.90%), Postives = 160/286 (55.94%), Query Frame = 0 

Query: 1   MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQAS 60
           MAV+S  CLQPQI VSQPSLSVATKV++GLK QSASPFGGAKPNIT EF GKVHKSLQ  
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 61  IENELSSLGRTLMKSLA----------------IKFWPQYY------------------- 120
             N+ ++  +  M  +                 +  W   Y                   
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 121 -----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLL 180
                 L +++  KKLY+YINGPGGD            SL+SP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 181 AAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG-------------------------- 203
           AAGEK       GNRSAMPLSRIALQ P+G+ARG                          
Sbjct: 181 AAGEK-------GNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKK 240

[Close]
BLAST of Carg16683 vs. TrEMBL
Match: tr|A0A2N9EX32|A0A2N9EX32_FAGSY (ATP-dependent Clp protease proteolytic subunit OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7036 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 9.6e-47
Identity = 125/285 (43.86%), Postives = 152/285 (53.33%), Query Frame = 0 

Query: 2   AVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASI 61
           ++ S++   PQ+  S P  S ATK++SGLKLQS++PFG   PN+T EF GKV+KSLQ   
Sbjct: 7   SIVSSRSFHPQVRASHPPPSCATKLYSGLKLQSSTPFGTGIPNLTAEFYGKVNKSLQPRT 66

Query: 62  ENELSSLGRTLMKSLA----------------IKFWPQYY-------------------- 121
            N +++ GR  M  +                 +  W   Y                    
Sbjct: 67  HNHIAARGRVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQHIDEEFSNQIL 126

Query: 122 ----ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLA 181
                L +++  K+LYMYINGPGGD            SL+SPV THCVG AYNLAAFLL+
Sbjct: 127 ATMLYLDSIESSKQLYMYINGPGGDLTPSMAIYDTMQSLKSPVGTHCVGYAYNLAAFLLS 186

Query: 182 AGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ-------------------------- 203
           AGEK       GNR AMPLSRIALQ P+GAARGQ                          
Sbjct: 187 AGEK-------GNRFAMPLSRIALQSPAGAARGQASDIQNEASELLRIRDYLFNELAKKT 246

[Close]
BLAST of Carg16683 vs. TrEMBL
Match: tr|I1K0I6|I1K0I6_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max OX=3847 GN=100800113 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 127/273 (46.52%), Postives = 148/273 (54.21%), Query Frame = 0 

Query: 15  VSQPSL-SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLM 74
           +S PS  SVATK++SGLKLQ+ASPFG AKPN+T EF GKVH +L     N  +S+ R  M
Sbjct: 41  LSPPSTSSVATKLYSGLKLQAASPFGAAKPNVTAEFYGKVHNTLHCRYANHNTSMARIRM 100

Query: 75  KSLA----------------IKFWPQYY------------------------ILTALKLP 134
             +                 +  W   Y                         L +++  
Sbjct: 101 MPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENS 160

Query: 135 KKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIG 194
           KKLYMYINGPGGD            SLQSPVATHCVG AY+LAAFLLAAGEK       G
Sbjct: 161 KKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEK-------G 220

Query: 195 NRSAMPLSRIALQPPSGAARGQ--------------------------------IIKDMN 203
           NRSAMPLSR+AL  P+GAARGQ                                I KD++
Sbjct: 221 NRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELAQKTGQPVEKITKDLS 280

[Close]
BLAST of Carg16683 vs. TrEMBL
Match: tr|A0A2P4KGF2|A0A2P4KGF2_QUESU (ATP-dependent Clp protease proteolytic subunit OS=Quercus suber OX=58331 GN=CFP56_29669 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 126/283 (44.52%), Postives = 148/283 (52.30%), Query Frame = 0 

Query: 4   SSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIEN 63
           +S    QPQ+  S P LS  TK++SGLKLQS+SPFG   PN+T +F GKV+KSLQ    N
Sbjct: 9   ASTPSFQPQVRASHPHLSCTTKLYSGLKLQSSSPFGIKIPNLTADFYGKVNKSLQPRTHN 68

Query: 64  ELSSLGRTLMKSLA----------------IKFWPQYY---------------------- 123
            +++ GR  M  +                 +  W   Y                      
Sbjct: 69  HIAARGRVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILAT 128

Query: 124 --ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAG 183
              L ++   K+LYMYINGPGGD            SL SPV THCVG AYNLAAFLLAAG
Sbjct: 129 MLYLDSVDNSKQLYMYINGPGGDLTPSMAIYDTMQSLNSPVTTHCVGYAYNLAAFLLAAG 188

Query: 184 EKVNTSICIGNRSAMPLSRIALQPPSGAARGQ---------------------------- 203
           EK       GNR  MPLSRIALQ P+GAARGQ                            
Sbjct: 189 EK-------GNRFTMPLSRIALQSPAGAARGQADDIHNEATELLRIRDYLFNELSKKTGQ 248

The following BLAST results are available for this feature:
BLAST of Carg16683 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551138.18.8e-6057.09ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-... [more]
XP_022158384.15.9e-5650.00ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ... [more]
XP_008437161.12.7e-5348.25PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl... [more]
XP_004147568.11.8e-5247.90PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl... [more]
XP_022957748.13.7e-5047.20ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ... [more]
BLAST of Carg16683 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12410.13.4e-3738.52CLP protease proteolytic subunit 2[more]
AT4G17040.18.6e-0925.78CLP protease R subunit 4[more]
AT5G23140.11.4e-0636.59nuclear-encoded CLP protease P7[more]
BLAST of Carg16683 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XJ36|CLPR2_ARATH6.0e-3638.52ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ... [more]
sp|Q8YP43|CLPP3_NOSS11.4e-1133.73Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ... [more]
sp|Q3MDK7|CLPP2_ANAVT5.2e-1133.73ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ... [more]
sp|A1BI15|CLPP_CHLPD9.7e-1026.96ATP-dependent Clp protease proteolytic subunit OS=Chlorobium phaeobacteroides (s... [more]
sp|B9DJL4|CLPP_STACT9.7e-1027.08ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strai... [more]
BLAST of Carg16683 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3ATH1|A0A1S3ATH1_CUCME1.8e-5348.25ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0KKQ7|A0A0A0KKQ7_CUCSA1.2e-5247.90ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa... [more]
tr|A0A2N9EX32|A0A2N9EX32_FAGSY9.6e-4743.86ATP-dependent Clp protease proteolytic subunit OS=Fagus sylvatica OX=28930 GN=FS... [more]
tr|I1K0I6|I1K0I6_SOYBN1.3e-4646.52ATP-dependent Clp protease proteolytic subunit OS=Glycine max OX=3847 GN=1008001... [more]
tr|A0A2P4KGF2|A0A2P4KGF2_QUESU1.3e-4644.52ATP-dependent Clp protease proteolytic subunit OS=Quercus suber OX=58331 GN=CFP5... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf
IPR023562ClpP/TepA
IPR001907ClpP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16683-RACarg16683-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 167..186
score: 41.62
coord: 114..131
score: 48.75
NoneNo IPR availableGENE3DG3DSA:3.90.226.10coord: 61..161
e-value: 5.3E-11
score: 44.5
NoneNo IPR availableGENE3DG3DSA:3.90.226.10coord: 162..198
e-value: 3.8E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR10381:SF15ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTICcoord: 68..163
coord: 163..198
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 67..164
e-value: 8.2E-10
score: 38.8
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 68..163
coord: 163..198
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILYSSF52096ClpP/crotonasecoord: 75..192

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16683Cla011533Watermelon (97103) v1carwmB0938
Carg16683Csa5G157950Cucumber (Chinese Long) v2carcuB0954
Carg16683MELO3C005589Melon (DHL92) v3.5.1carmeB0920
Carg16683CSPI05G06260Wild cucumber (PI 183967)carcpiB0977
Carg16683Cucsa.302360Cucumber (Gy14) v1carcgyB1054
Carg16683CmaCh02G015090Cucurbita maxima (Rimu)carcmaB1284
Carg16683CmaCh15G011700Cucurbita maxima (Rimu)carcmaB1281
Carg16683CmoCh15G012330Cucurbita moschata (Rifu)carcmoB1252
Carg16683CmoCh02G015500Cucurbita moschata (Rifu)carcmoB1255
Carg16683Lsi09G003700Bottle gourd (USVL1VR-Ls)carlsiB851
Carg16683CsGy5G003580Cucumber (Gy14) v2carcgybB0927
Carg16683MELO3C005589.2Melon (DHL92) v3.6.1carmedB0927
Carg16683CsaV3_5G003660Cucumber (Chinese Long) v3carcucB0979
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16683Carg02477Silver-seed gourdcarcarB642
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16683Silver-seed gourdcarcarB476
Carg16683Silver-seed gourdcarcarB634
Carg16683Silver-seed gourdcarcarB636
Carg16683Silver-seed gourdcarcarB643
Carg16683Cucumber (Gy14) v2carcgybB0924
Carg16683Cucumber (Gy14) v2carcgybB0925
Carg16683Cucumber (Gy14) v1carcgyB1055
Carg16683Cucurbita maxima (Rimu)carcmaB1282
Carg16683Cucurbita maxima (Rimu)carcmaB1283
Carg16683Cucurbita moschata (Rifu)carcmoB1254
Carg16683Cucurbita moschata (Rifu)carcmoB1256
Carg16683Cucurbita pepo (Zucchini)carcpeB1295
Carg16683Cucurbita pepo (Zucchini)carcpeB1296
Carg16683Cucurbita pepo (Zucchini)carcpeB1297
Carg16683Cucurbita pepo (Zucchini)carcpeB1298
Carg16683Cucurbita pepo (Zucchini)carcpeB1299
Carg16683Wild cucumber (PI 183967)carcpiB0974
Carg16683Wild cucumber (PI 183967)carcpiB0975
Carg16683Cucumber (Chinese Long) v2carcuB0951
Carg16683Cucumber (Chinese Long) v2carcuB0953
Carg16683Cucumber (Chinese Long) v3carcucB0975
Carg16683Cucumber (Chinese Long) v3carcucB0977
Carg16683Bottle gourd (USVL1VR-Ls)carlsiB852
Carg16683Bottle gourd (USVL1VR-Ls)carlsiB853
Carg16683Bottle gourd (USVL1VR-Ls)carlsiB854
Carg16683Melon (DHL92) v3.5.1carmeB0921
Carg16683Melon (DHL92) v3.5.1carmeB0922
Carg16683Melon (DHL92) v3.6.1carmedB0928
Carg16683Watermelon (Charleston Gray)carwcgB0911
Carg16683Watermelon (Charleston Gray)carwcgB0912
Carg16683Watermelon (97103) v1carwmB0936
Carg16683Watermelon (97103) v1carwmB0937
Carg16683Watermelon (97103) v2carwmbB0980
Carg16683Watermelon (97103) v2carwmbB0981
Carg16683Watermelon (97103) v2carwmbB0983
Carg16683Watermelon (97103) v2carwmbB0985
Carg16683Wax gourdcarwgoB1080
Carg16683Wax gourdcarwgoB1083
Carg16683Cucurbita maxima (Rimu)carcmaB1285