Carg16653 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16653
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rhomboid-like protein
Location	Cucurbita_argyrosperma_scaffold_064 : 389581 .. 391198 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCAAGAACTGGAACGTAGTGACTCGAATGCGAGCTATTCTTCTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTATGATCATGTACGTCAATAATTGCCCCACTTCCAATCTGGGTTATGGAGATAAGTGTGTGGCCACTTTTCTTGGGCGGTTTTCGTTGCAGCCTTTCAAGGAGAATCCCCTCTTGGGTCCCTCTTCAAATACGTATGTCTCTGCGGCTGCTCTGTTTTTACCCCCTTTATTTCATCTCCATCTGCTCTGTTTTTGTTTGATCCTTCGTTCCTCTTAATTTCATTGATTTGCTCTAAAGACTATTGAAATTGGGAGCTTTGAAATGGGATAAGATTGTTCGTCAGCATCAACTATGGAGACTTATGTCCTGTATCTGGTTGCACGCTGGAATCATTCATCTTCTTGCAAATATGTTGAGTTTGGCTTTTTGATTGGGATCCGCCTTAGAGCAACAATTTGGATTTGGTATGACTCCCGTAAATTTACAATATCTGCTAACGGTGGACTCGTGTAGGAGGCTGAGCTCCAAATGGGTGGATATGAGGTAGTGTGCTAGCAAGGATGTTGGACCTCGAGGGGGTGGATTGGGAGGGTCCCACATCGATTAGAGAAGGAAACGAGTAACAGCGAGGACGTTGGGACCGAAGGGGGTGAATTGTGAGGTCCCACATCGGTTGGAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTAAACACGAAAACGACAATATCTAGTTGGGAGCTTAGTTTTATTTTCATTCTTATAAGACTGATTGATTCTTGCAGTGAAAATCGGGATAATATATCTTGTTACTGGAGTTGGCGGGAGCGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTTTGGGTGCTTCGGGTGCCCTCTTTGGACTTCTTGGAGCTATGCTATCCGAGCTTTTAGTGAACTGGACAATCTACTCCAACAAGGTTAGCTGCCAGACATTGAATCCGACATTGAATATTTGTGTTTGTAACAGCTTTGTCTGTTTACTTTTTGGTGTGATGTGTTTTTATAGGCTGCTTCACTCTTCACCCTCATTGGGATCGTACTAATTAACTTGGCAGTTGGTGTGCTGCCTCATGTGGACAACTTCTCCCACATTGGAGGATTCTTAACAGGATCACTTCTCGGGTTTGTGTTGCTTATACGACCGCAGTTCAAATGGGCCGAGCGCCACGATCTCCCACCCTGTACTCGTCATGTATCCAAGTATAAAAATTATCAGGATATCCTCCTGCAAGTCTATACGACGATACGTAACGAGTCAAAATGGACAATATGTACTCGCGGTAGAGATGTTACAACTTATTACTTTCAACAAGATAGCGTTGGATTCTTTGTTGCTTCCTGTATCCCGTTTACGACATGTTCGAATCGAGTTAACTAATTCAGTTTGTTGTGTGTTGCACAGCTTTACCATGGGGCTGGCTATGCTATTCAAGGGGGACAGTGGACACAAGCACTGCAGCTGGTGCCATTACCTAAGCTGTGTGCCAACTTCAAAATGGGACTGTGCAAATTAGCCATTCTTGATTGA

mRNA sequence

ATGTCGAATCAAGAACTGGAACGTAGTGACTCGAATGCGAGCTATTCTTCTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTATGATCATGTACGTCAATAATTGCCCCACTTCCAATCTGGGTTATGGAGATAAGTGTGTGGCCACTTTTCTTGGGCGGTTTTCGTTGCAGCCTTTCAAGGAGAATCCCCTCTTGGGTCCCTCTTCAAATACACTATTGAAATTGGGAGCTTTGAAATGGGATAAGATTGTTCGTCAGCATCAACTATGGAGACTTATGTCCTTGAAAATCGGGATAATATATCTTGTTACTGGAGTTGGCGGGAGCGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTTTGGGTGCTTCGGGTGCCCTCTTTGGACTTCTTGGAGCTATGCTATCCGAGCTTTTAGTGAACTGGACAATCTACTCCAACAAGGCTGCTTCACTCTTCACCCTCATTGGGATCGTACTAATTAACTTGGCAGTTGGTGTGCTGCCTCATGTGGACAACTTCTCCCACATTGGAGGATTCTTAACAGGATCACTTCTCGGGTTTGTGTTGCTTATACGACCGCAGTTCAAATGGGCCGAGCGCCACGATCTCCCACCCTGTACTCGTCATCTTTACCATGGGGCTGGCTATGCTATTCAAGGGGGACAGTGGACACAAGCACTGCAGCTGGTGCCATTACCTAAGCTGTGTGCCAACTTCAAAATGGGACTGTGCAAATTAGCCATTCTTGATTGA

Coding sequence (CDS)

ATGTCGAATCAAGAACTGGAACGTAGTGACTCGAATGCGAGCTATTCTTCTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTATGATCATGTACGTCAATAATTGCCCCACTTCCAATCTGGGTTATGGAGATAAGTGTGTGGCCACTTTTCTTGGGCGGTTTTCGTTGCAGCCTTTCAAGGAGAATCCCCTCTTGGGTCCCTCTTCAAATACACTATTGAAATTGGGAGCTTTGAAATGGGATAAGATTGTTCGTCAGCATCAACTATGGAGACTTATGTCCTTGAAAATCGGGATAATATATCTTGTTACTGGAGTTGGCGGGAGCGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTTTGGGTGCTTCGGGTGCCCTCTTTGGACTTCTTGGAGCTATGCTATCCGAGCTTTTAGTGAACTGGACAATCTACTCCAACAAGGCTGCTTCACTCTTCACCCTCATTGGGATCGTACTAATTAACTTGGCAGTTGGTGTGCTGCCTCATGTGGACAACTTCTCCCACATTGGAGGATTCTTAACAGGATCACTTCTCGGGTTTGTGTTGCTTATACGACCGCAGTTCAAATGGGCCGAGCGCCACGATCTCCCACCCTGTACTCGTCATCTTTACCATGGGGCTGGCTATGCTATTCAAGGGGGACAGTGGACACAAGCACTGCAGCTGGTGCCATTACCTAAGCTGTGTGCCAACTTCAAAATGGGACTGTGCAAATTAGCCATTCTTGATTGA

Protein sequence

MSNQELERSDSNASYSSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMSLKIGIIYLVTGVGGSVMSSLFIQNNISLGASGALFGLLGAMLSELLVNWTIYSNKAASLFTLIGIVLINLAVGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFKMGLCKLAILD

Homology

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BLAST of Carg16653 vs. NCBI nr
Match: XP_022969832.1 (RHOMBOID-like protein 2 [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 6.0e-83
Identity = 180/298 (60.40%), Postives = 188/298 (63.09%), Query Frame = 0


Query: 1   MSNQELERSDSNASYSSS-------EKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLG 60
           MSNQELERSDS+ASYSSS       EKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLG
Sbjct: 1   MSNQELERSDSSASYSSSPYYMETCEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLG 60

Query: 61  YGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS------- 120
           +GDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGAL+WDKIVRQHQ+WRLMS       
Sbjct: 61  FGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALQWDKIVRQHQVWRLMSCIWLHAG 120

Query: 121 ------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXX 180
                                   +KIGIIYLVTGVGGSVMSSLFIQNNI          
Sbjct: 121 IIHLLANMLSLALIGIRLEQQFGFVKIGIIYLVTGVGGSVMSSLFIQNNISVGASGALFG 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFV 240
                                               GVLPHVDNFSHIGGFLTG LLGFV
Sbjct: 181 LLGAMLSELLVNWTIYSNKAASLFTLIVIVVINLAVGVLPHVDNFSHIGGFLTGLLLGFV 240

Query: 241 LLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFKMGLCKL 261
           LLIRPQFKWAERH LPPCTR +   + Y I    +   L L     L A F MGL  L
Sbjct: 241 LLIRPQFKWAERHHLPPCTRRV---SKYKI----YQYILWLAAASLLVAGFTMGLAML 291

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BLAST of Carg16653 vs. NCBI nr
Match: XP_008437215.1 (PREDICTED: RHOMBOID-like protein 2 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 154/306 (50.33%), Postives = 174/306 (56.86%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYSS-------SEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        ++ NA+YSS       SEKQWTPWLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSSSSYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP SNLG+GDKCVA FLGRFS QP +ENPLLGPSSNTL+KLGALKW+K+V +HQ WRL 
Sbjct: 61  NCPNSNLGFGDKCVAGFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLF 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IGIIYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLL+RPQFKW ERH LPP       GA    +   +   L L     L A F 
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPP-------GAQRVPKYKTYQYILWLAAAIVLVAGFT 299

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BLAST of Carg16653 vs. NCBI nr
Match: XP_004143929.1 (PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus] >KGN50139.1 hypothetical protein Csa_5G155500 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 9.4e-68
Identity = 154/306 (50.33%), Postives = 177/306 (57.84%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYS-------SSEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        ++ NA+YS       +SEKQWTPWLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSTSPYYLETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP SNLG+GDKCVA+FLGRFS QP +ENPLLGPSSNTL+KLGALKW+K+V +HQ WRL+
Sbjct: 61  NCPDSNLGFGDKCVASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLL 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IG+IYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLL+RPQFKW ERH LPP  R +     Y  Q   W  A  L     L A F 
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGARRVPKYKTY--QYILWLAAAIL-----LVAGFT 299

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BLAST of Carg16653 vs. NCBI nr
Match: XP_023533312.1 (RHOMBOID-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67
Identity = 154/306 (50.33%), Postives = 175/306 (57.19%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYS-------SSEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        S+   +YS       +SEKQWTPWLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP +NLG+GDKCVA FLGRFS QP KENPLLGPSSNTL+KLGALKWDK+V +HQ WRL+
Sbjct: 61  NCPKTNLGFGDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IGIIYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLLIRPQFKW ERH LPP  + +     Y I    +   L +V    L A F 
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRV---PKYKI----YQYILWIVAAILLVAGFT 299

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BLAST of Carg16653 vs. NCBI nr
Match: XP_022958114.1 (RHOMBOID-like protein 2 [Cucurbita moschata])

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66
Identity = 153/306 (50.00%), Postives = 174/306 (56.86%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYS-------SSEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        S+   +YS       +SEKQWT WLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTAWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP +NLG+GDKCVA FLGRFS QP KENPLLGPSSNTL+KLGALKWDK+V +HQ WRL+
Sbjct: 61  NCPKTNLGFGDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IGIIYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLLIRPQFKW ERH LPP  + +     Y I    +   L +V    L A F 
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRV---PKYKI----YQYILWIVAAILLVAGFT 299

[Close]

BLAST of Carg16653 vs. TAIR10
Match: AT1G63120.1 (RHOMBOID-like 2)

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 131/272 (48.16%), Postives = 168/272 (61.76%), Query Frame = 0


Query: 1   MSNQELER-------SDSNASY--SSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSN 60
           M+N+++ER       +++N  Y  SS E  WT WL+P  VVAN+A+FI +M+VN+CP   
Sbjct: 1   MANRDVERVGKKNRGANNNYFYEESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKI 60

Query: 61  LGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS----- 120
            G   +CVA FLGRFS QP KENPL GPSS+TL K+GAL+W K+V +HQ WRL+S     
Sbjct: 61  TGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLH 120

Query: 121 --------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXX 180
                                     +++G+IYL++G+GGS++SSLF+Q +I       X
Sbjct: 121 AGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGAX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLG 233
           XXXXXXXXXXXXXXXXXXXXXXXXXX            G+LP VDNF+HIGGFLTG  LG
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXTLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLG 240

[Close]

BLAST of Carg16653 vs. TAIR10
Match: AT5G07250.1 (RHOMBOID-like protein 3)

HSP 1 Score: 183.0 bits (463), Expect = 2.5e-46
Identity = 144/273 (52.75%), Postives = 177/273 (64.84%), Query Frame = 0


Query: 21  QWTPWLVPMFVVANIAMFIMIMYVNNCPT--SNLGYGDKCVATFLGRFSLQPFKENPLLG 80
           +WT WLVPMFVVAN+A+F++ M+VNNCP    +      CVA FLGR S +P + NPL G
Sbjct: 52  RWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFG 111

Query: 81  PSSNTLLKLGALKWDKIVRQHQLWRLMS-------------------------------L 140
           PSS+TL KLGAL+W K+V + + WRL++                               +
Sbjct: 112 PSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFV 171

Query: 141 KIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
           +IG+IYL++G+GGSV+SSLFI+N+I XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 172 RIGVIYLLSGIGGSVLSSLFIRNSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 231

Query: 201 XXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHG 260
           XXXXX      G+LPHVDNF+H+GGF+TG LLGF+LL RPQFKW  R  +P  T   Y  
Sbjct: 232 XXXXXLINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKY 291

[Close]

BLAST of Carg16653 vs. TAIR10
Match: AT3G53780.2 (RHOMBOID-like protein 4)

HSP 1 Score: 165.6 bits (418), Expect = 4.1e-41
Identity = 106/296 (35.81%), Postives = 142/296 (47.97%), Query Frame = 0


Query: 2   SNQELERSDSNASYS------SSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYG 61
           S Q+   + S +SY          + W PWL+P FVVAN+A+F++ MYVNNCP  +   G
Sbjct: 38  SGQQRSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKS---G 97

Query: 62  DKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS--------- 121
           D C A FLGRFS Q  +ENPLLGPSS TL  +G L   K+V+  + WRL+S         
Sbjct: 98  D-CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVV 157

Query: 122 ----------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXX 181
                                 ++IG++YL++G GGS++S+LF+++NI            
Sbjct: 158 HLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVFGLL 217

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLL 241
                                             GVLP VDNF+HIGGF TG LLGFVLL
Sbjct: 218 GGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLL 277

Query: 242 IRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFKMGLCKL 261
           IRP + W  + + P    H +       QG  WT +L +     L A F +GL  L
Sbjct: 278 IRPHYGWINQRNGPGAKPHRFK----IYQGILWTISLLI-----LVAGFIVGLISL 320

[Close]

BLAST of Carg16653 vs. TAIR10
Match: AT1G12750.1 (RHOMBOID-like protein 6)

HSP 1 Score: 162.2 bits (409), Expect = 4.5e-40
Identity = 88/244 (36.07%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 1   MSNQELERSDSNASYSSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYGDKCVA 60
           M ++++ER   +      + QWT WL P  VVAN+++FI++MY N+CP +  G    CVA
Sbjct: 1   MRSRDMERGRKH----RGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVA 60

Query: 61  TFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS-------------- 120
             L RFS QP +ENP LGPSS+TL KLGAL W K+V+ ++ WRL++              
Sbjct: 61  KLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMN 120

Query: 121 -----------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXX 180
                            ++IG+IYL++G GGS++S+LF+Q +I                 
Sbjct: 121 MFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQF 214
                                        G+LP VDNF+HIGG LTG  LGF+LL++PQ 
Sbjct: 181 ELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQS 240

[Close]

BLAST of Carg16653 vs. TAIR10
Match: AT2G29050.1 (RHOMBOID-like 1)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 97/277 (35.02%), Postives = 131/277 (47.29%), Query Frame = 0


Query: 20  KQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGP 79
           K W PWLVP  VVANIA+F + M++NNCP  N  Y   C+A FLGRF+ QP KENPLLGP
Sbjct: 52  KLWFPWLVPAIVVANIALFAISMFINNCP-KNSAY---CLARFLGRFAFQPMKENPLLGP 111

Query: 80  SSNTLLKLGALKWDKIVRQHQLWRLMS-------------------------------LK 139
           SS TL K+GAL    +V +H++WRL +                               ++
Sbjct: 112 SSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVR 171

Query: 140 IGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
           IG++Y+++G GGS++SSLF +  I                                    
Sbjct: 172 IGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 200 XXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGA 259
                     G+LPHVDNF+H+GGF +G LLGFV LIRPQ+ +  + + P          
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNP---------R 291

Query: 260 GYAIQGGQ-----WTQALQLVPLPKLCANFKMGLCKL 261
           GYA    +     +   L +  L  L A +  GL  L
Sbjct: 292 GYAAPSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVL 315

[Close]

BLAST of Carg16653 vs. Swiss-Prot
Match: sp|Q9CAN1|RBL2_ARATH (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-46
Identity = 131/272 (48.16%), Postives = 168/272 (61.76%), Query Frame = 0


Query: 1   MSNQELER-------SDSNASY--SSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSN 60
           M+N+++ER       +++N  Y  SS E  WT WL+P  VVAN+A+FI +M+VN+CP   
Sbjct: 1   MANRDVERVGKKNRGANNNYFYEESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKI 60

Query: 61  LGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS----- 120
            G   +CVA FLGRFS QP KENPL GPSS+TL K+GAL+W K+V +HQ WRL+S     
Sbjct: 61  TGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLH 120

Query: 121 --------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXX 180
                                     +++G+IYL++G+GGS++SSLF+Q +I       X
Sbjct: 121 AGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGAX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLG 233
           XXXXXXXXXXXXXXXXXXXXXXXXXX            G+LP VDNF+HIGGFLTG  LG
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXTLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLG 240

[Close]

BLAST of Carg16653 vs. Swiss-Prot
Match: sp|Q9LYP1|RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.4e-45
Identity = 144/273 (52.75%), Postives = 177/273 (64.84%), Query Frame = 0


Query: 21  QWTPWLVPMFVVANIAMFIMIMYVNNCPT--SNLGYGDKCVATFLGRFSLQPFKENPLLG 80
           +WT WLVPMFVVAN+A+F++ M+VNNCP    +      CVA FLGR S +P + NPL G
Sbjct: 52  RWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFG 111

Query: 81  PSSNTLLKLGALKWDKIVRQHQLWRLMS-------------------------------L 140
           PSS+TL KLGAL+W K+V + + WRL++                               +
Sbjct: 112 PSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFV 171

Query: 141 KIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
           +IG+IYL++G+GGSV+SSLFI+N+I XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 172 RIGVIYLLSGIGGSVLSSLFIRNSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 231

Query: 201 XXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHG 260
           XXXXX      G+LPHVDNF+H+GGF+TG LLGF+LL RPQFKW  R  +P  T   Y  
Sbjct: 232 XXXXXLINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKY 291

[Close]

BLAST of Carg16653 vs. Swiss-Prot
Match: sp|F4JBM4|RBL4_ARATH (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.3e-40
Identity = 106/296 (35.81%), Postives = 142/296 (47.97%), Query Frame = 0


Query: 2   SNQELERSDSNASYS------SSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYG 61
           S Q+   + S +SY          + W PWL+P FVVAN+A+F++ MYVNNCP  +   G
Sbjct: 38  SGQQRSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKS---G 97

Query: 62  DKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS--------- 121
           D C A FLGRFS Q  +ENPLLGPSS TL  +G L   K+V+  + WRL+S         
Sbjct: 98  D-CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVV 157

Query: 122 ----------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXX 181
                                 ++IG++YL++G GGS++S+LF+++NI            
Sbjct: 158 HLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVFGLL 217

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLL 241
                                             GVLP VDNF+HIGGF TG LLGFVLL
Sbjct: 218 GGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLL 277

Query: 242 IRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFKMGLCKL 261
           IRP + W  + + P    H +       QG  WT +L +     L A F +GL  L
Sbjct: 278 IRPHYGWINQRNGPGAKPHRFK----IYQGILWTISLLI-----LVAGFIVGLISL 320

[Close]

BLAST of Carg16653 vs. Swiss-Prot
Match: sp|Q8VZ48|RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.1e-39
Identity = 88/244 (36.07%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 1   MSNQELERSDSNASYSSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYGDKCVA 60
           M ++++ER   +      + QWT WL P  VVAN+++FI++MY N+CP +  G    CVA
Sbjct: 1   MRSRDMERGRKH----RGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVA 60

Query: 61  TFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS-------------- 120
             L RFS QP +ENP LGPSS+TL KLGAL W K+V+ ++ WRL++              
Sbjct: 61  KLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMN 120

Query: 121 -----------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXX 180
                            ++IG+IYL++G GGS++S+LF+Q +I                 
Sbjct: 121 MFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQF 214
                                        G+LP VDNF+HIGG LTG  LGF+LL++PQ 
Sbjct: 181 ELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQS 240

[Close]

BLAST of Carg16653 vs. Swiss-Prot
Match: sp|Q0WQX7|RBL1_ARATH (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 97/277 (35.02%), Postives = 131/277 (47.29%), Query Frame = 0


Query: 20  KQWTPWLVPMFVVANIAMFIMIMYVNNCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGP 79
           K W PWLVP  VVANIA+F + M++NNCP  N  Y   C+A FLGRF+ QP KENPLLGP
Sbjct: 52  KLWFPWLVPAIVVANIALFAISMFINNCP-KNSAY---CLARFLGRFAFQPMKENPLLGP 111

Query: 80  SSNTLLKLGALKWDKIVRQHQLWRLMS-------------------------------LK 139
           SS TL K+GAL    +V +H++WRL +                               ++
Sbjct: 112 SSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVR 171

Query: 140 IGIIYLVTGVGGSVMSSLFIQNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
           IG++Y+++G GGS++SSLF +  I                                    
Sbjct: 172 IGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 200 XXXXXXXXXXGVLPHVDNFSHIGGFLTGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGA 259
                     G+LPHVDNF+H+GGF +G LLGFV LIRPQ+ +  + + P          
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNP---------R 291

Query: 260 GYAIQGGQ-----WTQALQLVPLPKLCANFKMGLCKL 261
           GYA    +     +   L +  L  L A +  GL  L
Sbjct: 292 GYAAPSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVL 315

[Close]

BLAST of Carg16653 vs. TrEMBL
Match: tr|A0A1S3AU27|A0A1S3AU27_CUCME (Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103482712 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 154/306 (50.33%), Postives = 174/306 (56.86%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYSS-------SEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        ++ NA+YSS       SEKQWTPWLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSSSSYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP SNLG+GDKCVA FLGRFS QP +ENPLLGPSSNTL+KLGALKW+K+V +HQ WRL 
Sbjct: 61  NCPNSNLGFGDKCVAGFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLF 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IGIIYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLL+RPQFKW ERH LPP       GA    +   +   L L     L A F 
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPP-------GAQRVPKYKTYQYILWLAAAIVLVAGFT 299

[Close]

BLAST of Carg16653 vs. TrEMBL
Match: tr|A0A0A0KMN4|A0A0A0KMN4_CUCSA (Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G155500 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.2e-68
Identity = 154/306 (50.33%), Postives = 177/306 (57.84%), Query Frame = 0


Query: 1   MSNQELER--------SDSNASYS-------SSEKQWTPWLVPMFVVANIAMFIMIMYVN 60
           MSNQ+LER        ++ NA+YS       +SEKQWTPWLVPMFVVANIAMFI++MYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSTSPYYLETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPTSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLM 120
           NCP SNLG+GDKCVA+FLGRFS QP +ENPLLGPSSNTL+KLGALKW+K+V +HQ WRL+
Sbjct: 61  NCPDSNLGFGDKCVASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLL 120

Query: 121 S-------------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXX 180
           S                               ++IG+IYLV GVGGSVMSSLFIQNNI  
Sbjct: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFL 240
                                                       G+LPHVDNF+HIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGSLLGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFK 261
           TG LLGFVLL+RPQFKW ERH LPP  R +     Y  Q   W  A  L     L A F 
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGARRVPKYKTY--QYILWLAAAIL-----LVAGFT 299

[Close]

BLAST of Carg16653 vs. TrEMBL
Match: tr|A0A1R3IA59|A0A1R3IA59_COCAP (Rhomboid-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13673 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 135/306 (44.12%), Postives = 172/306 (56.21%), Query Frame = 0


Query: 1   MSNQELERSDSNAS----------YSSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPTS 60
           M++++LER   +              SSEKQWT WLVPMFVVAN+A+F++ MYVNNCP +
Sbjct: 1   MASRDLERGGGHGKNRGNNYGPYYVESSEKQWTSWLVPMFVVANVAVFVVAMYVNNCPKN 60

Query: 61  NLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS---- 120
           N G+  +CVA FLGR S QP +ENPL GPSSNTL K+GAL WDK+V  +Q WRL++    
Sbjct: 61  NDGFEGRCVARFLGRLSFQPLRENPLFGPSSNTLEKMGALNWDKVVHGNQGWRLITCIWL 120

Query: 121 ---------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXXX 180
                                      L++G+IYL++G+GGS++SSLFIQ NI       
Sbjct: 121 HAGVIHLLANMLSLVFIGIRLEQQFGFLRVGLIYLLSGLGGSILSSLFIQKNISVGASGA 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSLL 240
                                                  G+LPHVDNF+HIGGFLTG  L
Sbjct: 181 LFGLLGAMLSELLTNWSIYSNKAAALITLVVIIVINLAVGILPHVDNFAHIGGFLTGLFL 240

Query: 241 GFVLLIRPQFKWAERHDLPPCTR----HLYH-GAGYAIQGGQWTQALQLVPLPKLCANFK 261
           GFVLL+RPQF WAERH+LP   R    + +H G   A+Q  +W + LQLVPLP+LCA  +
Sbjct: 241 GFVLLLRPQFGWAERHNLPAGARVKSKYTFHGGVSNAVQRREWERPLQLVPLPELCAYIE 300

[Close]

BLAST of Carg16653 vs. TrEMBL
Match: tr|A0A1R3KRJ0|A0A1R3KRJ0_9ROSI (Rhomboid-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_05258 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.2e-60
Identity = 137/319 (42.95%), Postives = 173/319 (54.23%), Query Frame = 0


Query: 1   MSNQELER-------SDSNASY-----SSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCP 60
           M++++LER       +  N +Y      SSEKQWT WLVPMFVVAN+A+F++ MYVNNCP
Sbjct: 1   MASRDLERGGGGHGKNRGNNNYGPYYVESSEKQWTSWLVPMFVVANVAVFVVAMYVNNCP 60

Query: 61  TSNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS-- 120
             N G+  +CVA FLGR S QP +ENPL GPSSNTL KLGAL WDK+V  +Q WRL++  
Sbjct: 61  KKNDGFEGRCVARFLGRLSFQPLRENPLFGPSSNTLEKLGALNWDKVVHGNQGWRLITCI 120

Query: 121 -----------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXX 180
                                        L++G+IYL++G+GGS++SSLFIQ NI     
Sbjct: 121 WLHAGVIHLLANMLSLVFIGIRLEQQFGFLRVGLIYLLSGLGGSILSSLFIQKNISVGAS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGS 240
                                                    G+LPHVDNF+HIGGFLTG 
Sbjct: 181 GALFGLLGAMLSELLTNWSIYSNKAAALITLVVIIAINLAVGILPHVDNFAHIGGFLTGL 240

Query: 241 LLGFVLLIRPQFKWAERHDLPPCTR---------------HLYH-GAGYAIQGGQWTQAL 261
            LGFVLL+RPQF WAER +LP   R                ++H G   A+Q  +W + L
Sbjct: 241 FLGFVLLLRPQFGWAERQNLPAGARVKSKYTVYQYVFLVIAVFHGGVSNAVQRREWERPL 300

[Close]

BLAST of Carg16653 vs. TrEMBL
Match: tr|A0A1S3BLK2|A0A1S3BLK2_CUCME (Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103490968 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.7e-54
Identity = 148/302 (49.01%), Postives = 179/302 (59.27%), Query Frame = 0


Query: 1   MSNQELERSD----------SNASY-SSSEKQWTPWLVPMFVVANIAMFIMIMYVNNCPT 60
           M +++LER            SN+ Y  +SEKQWT WLVPMFVVAN+AMFI++MYVNNCP 
Sbjct: 1   MGSRDLERGGAKTNNAPGYYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPK 60

Query: 61  SNLGYGDKCVATFLGRFSLQPFKENPLLGPSSNTLLKLGALKWDKIVRQHQLWRLMS--- 120
            NLG  ++CVA FLGRFS +P + NPL GPSS+TL KLGAL+W+KIV  HQ WRL++   
Sbjct: 61  HNLG-SEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIW 120

Query: 121 ----------------------------LKIGIIYLVTGVGGSVMSSLFIQNNIXXXXXX 180
                                       +++GI+YL++G+GGS++SSLFIQNNI      
Sbjct: 121 LHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASG 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLPHVDNFSHIGGFLTGSL 240
             XXXXXXXXXXXX           XXXXXX         G+LPHVDNF+HIGGFLTG L
Sbjct: 181 ALXXXXXXXXXXXXTNWTIYTDKAAXXXXXXVIIVINLAVGILPHVDNFAHIGGFLTGFL 240

Query: 241 LGFVLLIRPQFKWAERHDLPPCTRHLYHGAGYAIQGGQWTQALQLVPLPKLCANFKMGLC 261
           LGFVLL+RPQF W ER  LP  +R +     Y          L  V L  L   F MGL 
Sbjct: 241 LGFVLLLRPQFGWIERRHLPANSRAVPKHKLY-------QYILCFVALALLIVGFTMGLV 294

The following BLAST results are available for this feature:

BLAST of Carg16653 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969832.1	6.0e-83	60.40	RHOMBOID-like protein 2 [Cucurbita maxima]	[more]
XP_008437215.1	7.2e-68	50.33	PREDICTED: RHOMBOID-like protein 2 [Cucumis melo]	[more]
XP_004143929.1	9.4e-68	50.33	PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus] >KGN50139.1 hypoth...	[more]
XP_023533312.1	1.6e-67	50.33	RHOMBOID-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022958114.1	1.4e-66	50.00	RHOMBOID-like protein 2 [Cucurbita moschata]	[more]

BLAST of Carg16653 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63120.1	1.3e-47	48.16	RHOMBOID-like 2	[more]
AT5G07250.1	2.5e-46	52.75	RHOMBOID-like protein 3	[more]
AT3G53780.2	4.1e-41	35.81	RHOMBOID-like protein 4	[more]
AT1G12750.1	4.5e-40	36.07	RHOMBOID-like protein 6	[more]
AT2G29050.1	1.4e-38	35.02	RHOMBOID-like 1	[more]

BLAST of Carg16653 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CAN1\|RBL2_ARATH	2.4e-46	48.16	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
sp\|Q9LYP1\|RBL3_ARATH	4.4e-45	52.75	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
sp\|F4JBM4\|RBL4_ARATH	7.3e-40	35.81	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]
sp\|Q8VZ48\|RBL6_ARATH	8.1e-39	36.07	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
sp\|Q0WQX7\|RBL1_ARATH	2.6e-37	35.02	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]

BLAST of Carg16653 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AU27\|A0A1S3AU27_CUCME	4.7e-68	50.33	Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103482712 PE=3 SV=1	[more]
tr\|A0A0A0KMN4\|A0A0A0KMN4_CUCSA	6.2e-68	50.33	Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G155500 PE=3 SV=1	[more]
tr\|A0A1R3IA59\|A0A1R3IA59_COCAP	2.3e-62	44.12	Rhomboid-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13673 PE=3 SV...	[more]
tr\|A0A1R3KRJ0\|A0A1R3KRJ0_9ROSI	6.2e-60	42.95	Rhomboid-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_05258 PE=3 SV=1	[more]
tr\|A0A1S3BLK2\|A0A1S3BLK2_CUCME	8.7e-54	49.01	Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103490968 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16653-RA	Carg16653-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	G3DSA:1.20.1540.10		coord: 102..208 e-value: 1.8E-14 score: 55.6
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 106..206 e-value: 2.0E-21 score: 76.4
None	No IPR available	PANTHER	PTHR22936:SF65	RHOMBOID-LIKE PROTEIN 7	coord: 9..106 coord: 107..226
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 84..209 coord: 21..48
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 107..226
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 9..106

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16653	Cla011480	Watermelon (97103) v1	carwmB0938
Carg16653	Csa5G155500	Cucumber (Chinese Long) v2	carcuB0954
Carg16653	MELO3C005637	Melon (DHL92) v3.5.1	carmeB0920
Carg16653	ClCG01G003060	Watermelon (Charleston Gray)	carwcgB0912
Carg16653	CSPI05G05800	Wild cucumber (PI 183967)	carcpiB0977
Carg16653	Cucsa.302830	Cucumber (Gy14) v1	carcgyB1054
Carg16653	CmaCh02G014780	Cucurbita maxima (Rimu)	carcmaB1283
Carg16653	CmaCh15G012020	Cucurbita maxima (Rimu)	carcmaB1281
Carg16653	CmoCh02G015160	Cucurbita moschata (Rifu)	carcmoB1254
Carg16653	Lsi09G002980	Bottle gourd (USVL1VR-Ls)	carlsiB851
Carg16653	Lsi07G013800	Bottle gourd (USVL1VR-Ls)	carlsiB854
Carg16653	Cp4.1LG13g01720	Cucurbita pepo (Zucchini)	carcpeB1295
Carg16653	Cp4.1LG05g03670	Cucurbita pepo (Zucchini)	carcpeB1298
Carg16653	CsGy5G003070	Cucumber (Gy14) v2	carcgybB0927
Carg16653	CsGy3G003440	Cucumber (Gy14) v2	carcgybB0925
Carg16653	CsaV3_5G003180	Cucumber (Chinese Long) v3	carcucB0979
Carg16653	Cla97C01G003140	Watermelon (97103) v2	carwmbB0980
Carg16653	Cla97C10G188050	Watermelon (97103) v2	carwmbB0981
Carg16653	Cla97C05G089890	Watermelon (97103) v2	carwmbB0984
Carg16653	Bhi12G000203	Wax gourd	carwgoB1081

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16653	Carg02509	Silver-seed gourd	carcarB643

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16653	Cucurbita moschata (Rifu)	carcmoB1252
Carg16653	Cucurbita moschata (Rifu)	carcmoB1253
Carg16653	Cucurbita moschata (Rifu)	carcmoB1256
Carg16653	Cucurbita pepo (Zucchini)	carcpeB1299
Carg16653	Wild cucumber (PI 183967)	carcpiB0976
Carg16653	Cucumber (Chinese Long) v2	carcuB0952
Carg16653	Cucumber (Chinese Long) v3	carcucB0978
Carg16653	Bottle gourd (USVL1VR-Ls)	carlsiB852
Carg16653	Melon (DHL92) v3.5.1	carmeB0922
Carg16653	Melon (DHL92) v3.6.1	carmedB0927
Carg16653	Melon (DHL92) v3.6.1	carmedB0928
Carg16653	Watermelon (Charleston Gray)	carwcgB0913
Carg16653	Watermelon (97103) v1	carwmB0937
Carg16653	Wax gourd	carwgoB1082
Carg16653	Cucurbita maxima (Rimu)	carcmaB1285
Carg16653	Silver-seed gourd	carcarB636
Carg16653	Cucumber (Gy14) v2	carcgybB0926