Carg16604 (gene) Silver-seed gourd

NameCarg16604
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_089 : 517185 .. 517367 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATTCAGAGGAAACCAGCAATATGGATCAAGTTATTGATACAGGCCGAGATACTAATACGGAAAATGATGGAGATAAGGGAAAGGATGCCATTGTCCTAATGGACAAAGAAAAATCAACTGATGCGGATTGTAATGGTTCAGAGCGAGACACAGATGTGGAGAAGAAAAAATGTTGA

mRNA sequence

ATGGAAGATTCAGAGGAAACCAGCAATATGGATCAAGTTATTGATACAGGCCGAGATACTAATACGGAAAATGATGGAGATAAGGGAAAGGATGCCATTGTCCTAATGGACAAAGAAAAATCAACTGATGCGGATTGTAATGGTTCAGAGCGAGACACAGATGTGGAGAAGAAAAAATGTTGA

Coding sequence (CDS)

ATGGAAGATTCAGAGGAAACCAGCAATATGGATCAAGTTATTGATACAGGCCGAGATACTAATACGGAAAATGATGGAGATAAGGGAAAGGATGCCATTGTCCTAATGGACAAAGAAAAATCAACTGATGCGGATTGTAATGGTTCAGAGCGAGACACAGATGTGGAGAAGAAAAAATGTTGA

Protein sequence

MEDSEETSNMDQVIDTGRDTNTENDGDKGKDAIVLMDKEKSTDADCNGSERDTDVEKKKC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16604-RACarg16604-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16604Wax gourdcarwgoB0293
Carg16604Wax gourdcarwgoB0291
Carg16604Silver-seed gourdcarcarB259
Carg16604Silver-seed gourdcarcarB274
Carg16604Cucumber (Gy14) v2carcgybB0251
Carg16604Cucumber (Gy14) v2carcgybB0250
Carg16604Cucumber (Gy14) v1carcgyB0276
Carg16604Cucumber (Gy14) v1carcgyB0278
Carg16604Cucurbita maxima (Rimu)carcmaB0325
Carg16604Cucurbita maxima (Rimu)carcmaB0326
Carg16604Cucurbita maxima (Rimu)carcmaB0329
Carg16604Cucurbita moschata (Rifu)carcmoB0328
Carg16604Cucurbita moschata (Rifu)carcmoB0329
Carg16604Cucurbita moschata (Rifu)carcmoB0332
Carg16604Cucurbita pepo (Zucchini)carcpeB0331
Carg16604Cucurbita pepo (Zucchini)carcpeB0334
Carg16604Cucurbita pepo (Zucchini)carcpeB0336
Carg16604Wild cucumber (PI 183967)carcpiB0265
Carg16604Wild cucumber (PI 183967)carcpiB0266
Carg16604Cucumber (Chinese Long) v2carcuB0261
Carg16604Cucumber (Chinese Long) v2carcuB0262
Carg16604Cucumber (Chinese Long) v3carcucB0265
Carg16604Cucumber (Chinese Long) v3carcucB0266
Carg16604Bottle gourd (USVL1VR-Ls)carlsiB209
Carg16604Bottle gourd (USVL1VR-Ls)carlsiB210
Carg16604Melon (DHL92) v3.5.1carmeB0239
Carg16604Melon (DHL92) v3.5.1carmeB0240
Carg16604Melon (DHL92) v3.6.1carmedB0247
Carg16604Melon (DHL92) v3.6.1carmedB0248
Carg16604Watermelon (Charleston Gray)carwcgB0226
Carg16604Watermelon (Charleston Gray)carwcgB0227
Carg16604Watermelon (97103) v1carwmB0223
Carg16604Watermelon (97103) v1carwmB0224
Carg16604Watermelon (97103) v2carwmbB0236
Carg16604Watermelon (97103) v2carwmbB0237