Carg16567 (gene) Silver-seed gourd

NameCarg16567
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_089 : 373084 .. 375283 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCAAGGATTAAAATAACTGATACAATTTTGGATGAACCTCTGTCGATGCCTTCGAGGTCTATCACAGGAATGCTCATTTGGGCTTCACCGGGAACAGGGGACTCGCCGAACTCAGGCGGCCGGTAAAATATTCCTGGGATTTGGGATAAGAATCTGATGCAATTTTATTATTGAAATTTAACGTAAAGTCATACAAAAGTATTACTATAAAACGAAGTGGAACTGAAAGAAAATTATTACAACGGATGATAAAAAGAACTGTTATGATCTTCGTCCATTTCCTTGCAATTTAAACCTCTGCTTGATTCAGCTTGTAATGCTTTAAAGTAGAAGTTCCAAGGCCGTCCGACCGGAATTGGATACTGAAGTCTCTGACGGTGGTTTCTCTGTATATTGCAGGTTTTTCTTCCGATAACAATTCCTTGATGGGTCCATGAAGTTTGTTGCTTGGCAAAACAAGCGTCGAAAAAATGCCCGCCACTGATATTCTCGGACCCTCATGTTTCGACACAACCCTATGATTAACGCTTTTGAACCTGTCATTTGTTATTAGCTGCATCAAAAAATCCAATTTAATTAAAGGGTGTCCGACATAGTTTGGCGATCCATATGTGCGTCGAAACAGGGAGGATGCTGCAGACTTACCTGCATAAGATCTCCGATGTTGACGACTAACGCTCCGGCGACAGGACACACGTCAATCCATTTGTTCTGATGACGAATCTGTAGGCCGCCGACGTGGTCTTGCAACAGCACCGTGATGAAGTCAGTGTCTGAGTGCTCGGATATGCCAATGGTCGATTTCGGCTGTGGGCATGCAGGGTAATAGTGGTATACAAATGCAAGCCCATCACTGCAGCCTATGTTGTTCAAGTAATTTGGGTTCAGACCGAGAGCCTCCGACAGCAATTCAAACAGTAATTTTCCAATCTCCATCACCCGTTTTGAGTAATCCACCAGAATATCTCTGCACAAAACAGAGGTTAGTAACAGAGTATTTTGTTTTGGTTCAAAATCAGCACATATACCTGCAAATTTCCGGCAAGTCCTGTGGATTGGGAAGGTTTGGAGCACTAGCATGGCTAAAGGTGTCCCTCCAATTGGTGGTCGCTGCAGAGTATAGATCGAAGTTACTATTGTAAACAAATGGCTTCGTGAGGTCCCGTGTATAGAATTGTTTCTTCACTTCCGTGTCTTGTTCGTGAAATCTCCGAACAGATTCTCTCATTTCTTCAAGAACGCTCGCCGGAATTCCATGGTTAATCAACTGGAAAAAACCCAATTCCTCTGAAGCTTCACGGATTTGTTCAACAATGTCTTTGCGTTTGAGTGAATCTTTGGCGACGCCTTCGAGGTCTATCACTGGAATACGGATTTGGGTTTCGCCGGAGTCATCTTCCTCCAGTGGGTGGTAAAAGATACGGGGAATTTCGGTAATTCCGGCGTCGACTAAGCCTTTAACGCCGGCTTTAGTGTCGTCGAAAGCCTTTAGTTCAGTGGGTCGGTGGTAGTTTTCGTCGGCCTTGGATAACGGAGTGAGGTTGATTCCATCGACTCCGTTGATCCCAAGGCTGCGACCGTCACTGTCCATTCTCTTGGCTTCGACGGAACGGATTGGATTCAAATCAAAAGAACTGAATCTTATTGTGAAGTGCCTTGATCGGTGGTGGCAGCTGTTGCATATAAATGCAGAAGGGATACTGTTAATGATGGGAAGTTTCGTTCGAGGTTCTAGTTTTCCTCTGGTAATGAATTTTCCAAGTTTGACTGAATGAGTGGATATGAATAACTCCTTTTCACATTATTAAGAGGTGTTCGATTTGGATCATGCTTATACAAGTCAAATTATTTATGGTTCGCATGTCGGATGTGTTTGATCGTATTTGTTTAAGGTATTGTCTACGACAGTATGCCACTTATTTTCATCAGAATCACGTGTATACCAAGTATGCATAAAATGTCTCAAAAAGAGTCATATGAGATGCTACTAGTTGTTAACTCCTCTCACTAAATTATGTTACTGGATTATGTTAGGTCGTTGCTTATTCATTTTTAGGCTATAACATTACTTTTCAGATTGTGCTTAGTTTTTCATTTTCTGTCAAATGTGACTCAATACTCAATCATTCGTTAAAATTATCTTCAAAGTTCGTTGTTCACACAACTGACTTGTTCACTAAATTAGAACAAGTGC

mRNA sequence

ATGAATTCAAGGATTAAAATAACTGATACAATTTTGGATGAACCTCTGTCGATGCCTTCGAGGTCTATCACAGGAATGCTCATTTGGGCTTCACCGGGAACAGGGGACTCGCCGAACTCAGGCGGCCGAAGTTCCAAGGCCGTCCGACCGGAATTGGATACTGAAGTCTCTGACGGTTTTTCTTCCGATAACAATTCCTTGATGGGTCCATGAAGTTTGTTGCTTGGCAAAACAAGCGTCGAAAAAATGCCCGCCACTGATATTCTCGGACCCTCATGTTTCGACACAACCCTATGATTAACGCTTTTGAACCTGTCATTTGTTATTAGCTGCATCAAAAAATCCAATTTAATTAAAGGGTGTCCGACATAGTTTGGCGATCCATATGTGCGTCGAAACAGGGAGGATGCTGCAGACTTACCTGCATAAGATCTCCGATGTTGACGACTAACGCTCCGGCGACAGGACACACGTCAATCCATTTGTTCTGATGACGAATCTGTAGGCCGCCGACGTGGTCTTGCAACAGCACCGTGATGAAGTCAGTGTCTGAGTGCTCGGATATGCCAATGGTCGATTTCGGCTGTGGGCATGCAGGGTAATAGTGGTATACAAATGCAAGCCCATCACTGCAGCCTATGTTGTTCAAGTAATTTGGGTTCAGACCGAGAGCCTCCGACAGCAATTCAAACAGTAATTTTCCAATCTCCATCACCCGTTTTGAGTAATCCACCAGAATATCTCTGCACAAAACAGAGGTTAGTAACAGAGTATTTTGTTTTGGTTCAAAATCAGCACATATACCTGCAAATTTCCGGCAAGTCCTGTGGATTGGGAAGGTTTGGAGCACTAGCATGGCTAAAGGTGTCCCTCCAATTGGTGGTCGCTGCAGAGTATAGATCGAAGTTACTATTGTAAACAAATGGCTTCGTGAGGTCCCGTGTATAGAATTGTTTCTTCACTTCCGTGTCTTGTTCGTGAAATCTCCGAACAGATTCTCTCATTTCTTCAAGAACGCTCGCCGGAATTCCATGGTTAATCAACTGGAAAAAACCCAATTCCTCTGAAGCTTCACGGATTTGTTCAACAATGTCTTTGCGTTTGAGTGAATCTTTGGCGACGCCTTCGAGGTCTATCACTGGAATACGGATTTGGGTTTCGCCGGAGTCATCTTCCTCCAGTGGGTGGTAAAAGATACGGGGAATTTCGGTAATTCCGGCGTCGACTAAGCCTTTAACGCCGGCTTTAGTGTCGTCGAAAGCCTTTAGTTCAGTGGGTCGGTGGTAGTTTTCGTCGGCCTTGGATAACGGAGTGAGGTTGATTCCATCGACTCCGTTGATCCCAAGGCTGCGACCGTCACTGTCCATTCTCTTGGCTTCGACGGAACGGATTGGATTCAAATCAAAAGAACTGAATCTTATTGTGAAGTGCCTTGATCGGTGGTGGCAGCTGTTGCATATAAATGCAGAAGGGATACTGTTAATGATGGGAAGTTTCGTTCGAGGTTCTAGTTTTCCTCTGGTAATGAATTTTCCAAGTTTGACTGAATGAGTGGATATGAATAACTCCTTTTCACATTATTAAGAGGTGTTCGATTTGGATCATGCTTATACAAGTCAAATTATTTATGGTTCGCATGTCGGATGTGTTTGATCGTATTTGTTTAAGGTATTGTCTACGACAGTATGCCACTTATTTTCATCAGAATCACGTGTATACCAAGTATGCATAAAATGTCTCAAAAAGAGTCATATGAGATGCTACTAGTTGTTAACTCCTCTCACTAAATTATGTTACTGGATTATGTTAGGTCGTTGCTTATTCATTTTTAGGCTATAACATTACTTTTCAGATTGTGCTTAGTTTTTCATTTTCTGTCAAATGTGACTCAATACTCAATCATTCGTTAAAATTATCTTCAAAGTTCGTTGTTCACACAACTGACTTGTTCACTAAATTAGAACAAGTGC

Coding sequence (CDS)

ATGAATTCAAGGATTAAAATAACTGATACAATTTTGGATGAACCTCTGTCGATGCCTTCGAGGTCTATCACAGGAATGCTCATTTGGGCTTCACCGGGAACAGGGGACTCGCCGAACTCAGGCGGCCGAAGTTCCAAGGCCGTCCGACCGGAATTGGATACTGAAGTCTCTGACGGTTTTTCTTCCGATAACAATTCCTTGATGGGTCCATGA

Protein sequence

MNSRIKITDTILDEPLSMPSRSITGMLIWASPGTGDSPNSGGRSSKAVRPELDTEVSDGFSSDNNSLMGP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16567-RACarg16567-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..70

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16567CmaCh14G018020Cucurbita maxima (Rimu)carcmaB0325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16567Silver-seed gourdcarcarB259
Carg16567Silver-seed gourdcarcarB274
Carg16567Silver-seed gourdcarcarB272
Carg16567Silver-seed gourdcarcarB273
Carg16567Silver-seed gourdcarcarB275
Carg16567Cucumber (Gy14) v2carcgybB0251
Carg16567Cucumber (Gy14) v2carcgybB0250
Carg16567Cucumber (Gy14) v1carcgyB0276
Carg16567Cucumber (Gy14) v1carcgyB0277
Carg16567Cucurbita maxima (Rimu)carcmaB0326
Carg16567Cucurbita maxima (Rimu)carcmaB0327
Carg16567Cucurbita maxima (Rimu)carcmaB0329
Carg16567Cucurbita maxima (Rimu)carcmaB0330
Carg16567Cucurbita moschata (Rifu)carcmoB0328
Carg16567Cucurbita moschata (Rifu)carcmoB0329
Carg16567Cucurbita moschata (Rifu)carcmoB0332
Carg16567Cucurbita moschata (Rifu)carcmoB0333
Carg16567Cucurbita pepo (Zucchini)carcpeB0331
Carg16567Cucurbita pepo (Zucchini)carcpeB0332
Carg16567Cucurbita pepo (Zucchini)carcpeB0333
Carg16567Cucurbita pepo (Zucchini)carcpeB0334
Carg16567Cucurbita pepo (Zucchini)carcpeB0335
Carg16567Cucurbita pepo (Zucchini)carcpeB0336
Carg16567Wild cucumber (PI 183967)carcpiB0265
Carg16567Wild cucumber (PI 183967)carcpiB0266
Carg16567Cucumber (Chinese Long) v2carcuB0261
Carg16567Cucumber (Chinese Long) v2carcuB0262
Carg16567Cucumber (Chinese Long) v3carcucB0265
Carg16567Cucumber (Chinese Long) v3carcucB0266
Carg16567Bottle gourd (USVL1VR-Ls)carlsiB209
Carg16567Bottle gourd (USVL1VR-Ls)carlsiB210
Carg16567Bottle gourd (USVL1VR-Ls)carlsiB211
Carg16567Melon (DHL92) v3.5.1carmeB0238
Carg16567Melon (DHL92) v3.5.1carmeB0240
Carg16567Melon (DHL92) v3.6.1carmedB0246
Carg16567Melon (DHL92) v3.6.1carmedB0248
Carg16567Watermelon (Charleston Gray)carwcgB0226
Carg16567Watermelon (Charleston Gray)carwcgB0227
Carg16567Watermelon (Charleston Gray)carwcgB0228
Carg16567Watermelon (97103) v1carwmB0223
Carg16567Watermelon (97103) v1carwmB0224
Carg16567Watermelon (97103) v2carwmbB0236
Carg16567Watermelon (97103) v2carwmbB0237
Carg16567Watermelon (97103) v2carwmbB0238
Carg16567Wax gourdcarwgoB0290
Carg16567Wax gourdcarwgoB0297
Carg16567Wax gourdcarwgoB0299