Carg16563 (gene) Silver-seed gourd

Overview
NameCarg16563
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_089 : 362416 .. 362865 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

mRNA sequence

ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

Coding sequence (CDS)

ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

Protein sequence

MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLLAQEEKKKKKNTI
Homology
[Close]
BLAST of Carg16563 vs. NCBI nr
Match: XP_023526049.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.3 bits (739), Expect = 7.6e-75
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPH FPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQXXXXXXXNTI 150
           QVIVLEYLDGRVLDDLLAQXXXXXXXN+I
Sbjct: 121 QVIVLEYLDGRVLDDLLAQXXXXXXXNSI 149

[Close]
BLAST of Carg16563 vs. NCBI nr
Match: XP_022980051.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 1.1e-73
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPH FPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQXXXXXXXNTI 150
           QVIVLEYLD RVL+DLLAQ XXXXX N+I
Sbjct: 121 QVIVLEYLDSRVLEDLLAQEXXXXXKNSI 149

[Close]
BLAST of Carg16563 vs. NCBI nr
Match: XP_022924699.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 1.4e-73
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRK KDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKPKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDT DAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTEDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQXXXXXXXNTI 150
           QVIVLEYLDGRVLDDLLAQXXXXXXXN+I
Sbjct: 121 QVIVLEYLDGRVLDDLLAQXXXXXXXNSI 149

[Close]
BLAST of Carg16563 vs. NCBI nr
Match: XP_008438535.1 (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 116/141 (82.27%), Postives = 127/141 (90.07%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED+RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDTRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPPH+FP S PIN GF++G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPHLFP-SVPINSGFESGGVGGGSSTSNVD 120

Query: 121 PHQVIVLEYLDGRVLDDLLAQ 140
           P +VIV EY+DGRVL+DLLAQ
Sbjct: 121 PQKVIVFEYVDGRVLEDLLAQ 140

[Close]
BLAST of Carg16563 vs. NCBI nr
Match: XP_004134412.1 (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 3.8e-58
Identity = 116/141 (82.27%), Postives = 126/141 (89.36%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDHRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPP++F SS  IN GFD+G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPNLF-SSTSINSGFDSGGVGGGSSTSNID 120

Query: 121 PHQVIVLEYLDGRVLDDLLAQ 140
           PH+VIV EY+DGRVL+DLLAQ
Sbjct: 121 PHKVIVFEYVDGRVLEDLLAQ 140

[Close]
BLAST of Carg16563 vs. TAIR10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 9.1e-30
Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           ME S +  + Q Q D   ++RGVRRRPWGK+AAEIRDPS+NGAR WLGT++TAE+AARAY
Sbjct: 1   MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DR AF+L+GHLA LNFP EYY R+      PP+     A                     
Sbjct: 61  DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPY-----ASXXXXXXXXXXXXXXXXXXXX 120

Query: 121 QVIVLEYLDGRVLDDLL 138
                EYLD +VL++LL
Sbjct: 121 XXXXXEYLDDKVLEELL 132

[Close]
BLAST of Carg16563 vs. TAIR10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G++YRGVRRRPWGK+AAEIRDP KNGAR WLGTY+T EDAA AYDR AF L+G  A LNF
Sbjct: 89  GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148

Query: 77  P 78
           P
Sbjct: 149 P 149

[Close]
BLAST of Carg16563 vs. TAIR10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 0 

Query: 18  IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFP 77
           +KYRGVR+RPWGKYAAEIRD +++GAR WLGT++TAEDAARAYDR AF ++G  A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 78  GEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLL 137
            EY  ++M   P+  H    +A                     +VI  EYLD  +L++LL
Sbjct: 72  HEY--QMMKDGPNGSH---ENAV---XXXXXXXXXXXXXXXXREVIEFEYLDDSLLEELL 123

[Close]
BLAST of Carg16563 vs. TAIR10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-22
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 19 KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPG 78
          KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAEDAARAYDR A+ ++G  A LNFP 
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78

Query: 79 EY 81
          EY
Sbjct: 79 EY 80

[Close]
BLAST of Carg16563 vs. TAIR10
Match: AT4G17500.1 (ethylene responsive element binding factor 1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G  YRGVR+RPWGK+AAEIRDP+KNGAR WLGT++TAEDAA AYDR AF ++G  A LNF
Sbjct: 145 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query: 77  PGEYYARVMGSPPHPPHV 95
           P     RV    P P  +
Sbjct: 205 P----LRVNSGEPDPVRI 218

[Close]
BLAST of Carg16563 vs. Swiss-Prot
Match: sp|Q9LTC5|ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 68/137 (49.64%), Postives = 84/137 (61.31%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           ME S +  + Q Q D   ++RGVRRRPWGK+AAEIRDPS+NGAR WLGT++TAE+AARAY
Sbjct: 1   MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DR AF+L+GHLA LNFP EYY R+      PP+     A                     
Sbjct: 61  DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPY-----ASXXXXXXXXXXXXXXXXXXXX 120

Query: 121 QVIVLEYLDGRVLDDLL 138
                EYLD +VL++LL
Sbjct: 121 XXXXXEYLDDKVLEELL 132

[Close]
BLAST of Carg16563 vs. Swiss-Prot
Match: sp|Q9LTC6|ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 0 

Query: 18  IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFP 77
           +KYRGVR+RPWGKYAAEIRD +++GAR WLGT++TAEDAARAYDR AF ++G  A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 78  GEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLL 137
            EY  ++M   P+  H    +A                     +VI  EYLD  +L++LL
Sbjct: 72  HEY--QMMKDGPNGSH---ENAV---XXXXXXXXXXXXXXXXREVIEFEYLDDSLLEELL 123

[Close]
BLAST of Carg16563 vs. Swiss-Prot
Match: sp|Q8L9K1|ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G++YRGVRRRPWGK+AAEIRDP KNGAR WLGTY+T EDAA AYDR AF L+G  A LNF
Sbjct: 89  GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148

Query: 77  P 78
           P
Sbjct: 149 P 149

[Close]
BLAST of Carg16563 vs. Swiss-Prot
Match: sp|P93822|ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-21
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 19 KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPG 78
          KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAEDAARAYDR A+ ++G  A LNFP 
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78

Query: 79 EY 81
          EY
Sbjct: 79 EY 80

[Close]
BLAST of Carg16563 vs. Swiss-Prot
Match: sp|O80337|EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G  YRGVR+RPWGK+AAEIRDP+KNGAR WLGT++TAEDAA AYDR AF ++G  A LNF
Sbjct: 145 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query: 77  PGEYYARVMGSPPHPPHV 95
           P     RV    P P  +
Sbjct: 205 P----LRVNSGEPDPVRI 218

[Close]
BLAST of Carg16563 vs. TrEMBL
Match: tr|A0A1S3AX97|A0A1S3AX97_CUCME (ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=LOC103483600 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.0e-59
Identity = 116/141 (82.27%), Postives = 127/141 (90.07%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED+RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDTRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPPH+FP S PIN GF++G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPHLFP-SVPINSGFESGGVGGGSSTSNVD 120

Query: 121 PHQVIVLEYLDGRVLDDLLAQ 140
           P +VIV EY+DGRVL+DLLAQ
Sbjct: 121 PQKVIVFEYVDGRVLEDLLAQ 140

[Close]
BLAST of Carg16563 vs. TrEMBL
Match: tr|A0A0A0L4F1|A0A0A0L4F1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G135620 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54
Identity = 109/133 (81.95%), Postives = 118/133 (88.72%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDHRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPP++F SS  IN GFD+G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPNLF-SSTSINSGFDSGGVGGGSSTSNID 120

Query: 121 PHQVIVLEYLDGR 132
           PH+VIV EY+DGR
Sbjct: 121 PHKVIVFEYVDGR 132

[Close]
BLAST of Carg16563 vs. TrEMBL
Match: tr|A0A061EMW2|A0A061EMW2_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_020870 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 0 

Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED  KGK+++++G D I+YRGVRRRPWGKYAAEIRDP+++GAR WLGT+DTAE+AARAY
Sbjct: 108 MEDPNKGKEKEEKGRDEIRYRGVRRRPWGKYAAEIRDPTRHGARSWLGTFDTAEEAARAY 167

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMG-SPPHPPHVFPS--SAPINRGFDTGDAGSSSSNP 120
           DR AF+L+GHLA LNFP EYY++VMG S P+P     S  S+ +N G +  + GSSSS+ 
Sbjct: 168 DRAAFNLRGHLAILNFPNEYYSQVMGSSSPYPASTMSSYLSSSVNAG-NISERGSSSSSG 227

Query: 121 DPHQVIVLEYLDGRVLDDLL 138
              QVI  EYLD +VL++LL
Sbjct: 228 QQKQVIEFEYLDDKVLEELL 246

[Close]
BLAST of Carg16563 vs. TrEMBL
Match: tr|A0A1S2XW82|A0A1S2XW82_CICAR (ethylene-responsive transcription factor ERF098 OS=Cicer arietinum OX=3827 GN=LOC101502636 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36
Identity = 77/138 (55.80%), Postives = 105/138 (76.09%), Query Frame = 0 

Query: 1   MEDSRKGK-DQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARA 60
           MED +KGK +++++G + +++RGVRRRPWGKYAAEIRDPSK G R WLGT+DTAE+AARA
Sbjct: 1   MEDHQKGKHEKEEKGKEEVRFRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARA 60

Query: 61  YDRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDP 120
           YDR A++L+GHLA LNFP EYY+++ GSPP+PPH+ P S+  +      +A  SSS P  
Sbjct: 61  YDRAAYNLRGHLAILNFPSEYYSKIRGSPPYPPHLAPPSSSHH-----ANASGSSSAPQH 120

Query: 121 HQVIVLEYLDGRVLDDLL 138
             +   E LD ++L++LL
Sbjct: 121 RPIFEFECLDDKILEELL 133

[Close]
BLAST of Carg16563 vs. TrEMBL
Match: tr|W9R427|W9R427_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis OX=981085 GN=L484_012825 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.0e-36
Identity = 86/160 (53.75%), Postives = 111/160 (69.38%), Query Frame = 0 

Query: 8   KDQQKQGDDG--------IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARA 67
           +DQQ++ ++G        ++YRGVRRRPWGK+AAEIRDPS+ GAR WLGT+DTAE+AARA
Sbjct: 11  QDQQEKDNEGRAGSREEAVRYRGVRRRPWGKFAAEIRDPSRQGARLWLGTFDTAEEAARA 70

Query: 68  YDRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHV-----------FPSSA--------P 127
           YDR AF+ +GHLA LNFP EYY+RVMGSPP+PPH+            PSS+         
Sbjct: 71  YDRAAFNFRGHLAILNFPNEYYSRVMGSPPYPPHISFSGSASASTFAPSSSGSAASSVGR 130

Query: 128 INRGFDTGDAGSSSSNPD---PHQVIVLEYLDGRVLDDLL 138
           + RGF+ GD  SS S+P    P +V  +EYLD +VL++LL
Sbjct: 131 LQRGFERGD--SSRSSPPVAAPQEVFEIEYLDDKVLEELL 168

The following BLAST results are available for this feature:
BLAST of Carg16563 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526049.17.6e-7598.66ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo... [more]
XP_022980051.11.1e-7395.97ethylene-responsive transcription factor ERF098-like [Cucurbita maxima][more]
XP_022924699.11.4e-7397.99ethylene-responsive transcription factor ERF098-like [Cucurbita moschata][more]
XP_008438535.14.5e-5982.27PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo][more]
XP_004134412.13.8e-5882.27PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus... [more]
BLAST of Carg16563 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23230.19.1e-3049.64Integrase-type DNA-binding superfamily protein[more]
AT2G44840.11.4e-2277.05ethylene-responsive element binding factor 13[more]
AT3G23220.11.4e-2249.17Integrase-type DNA-binding superfamily protein[more]
AT1G04370.13.1e-2275.81Ethylene-responsive element binding factor 14[more]
AT4G17500.11.2e-2162.82ethylene responsive element binding factor 1[more]
BLAST of Carg16563 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LTC5|ERF98_ARATH1.6e-2849.64Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9LTC6|ERF95_ARATH2.5e-2149.17Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q8L9K1|ERF99_ARATH2.5e-2177.05Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
sp|P93822|ERF97_ARATH5.6e-2175.81Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
sp|O80337|EF100_ARATH2.1e-2062.82Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E... [more]
BLAST of Carg16563 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AX97|A0A1S3AX97_CUCME3.0e-5982.27ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0L4F1|A0A0A0L4F1_CUCSA1.7e-5481.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G135620 PE=4 SV=1[more]
tr|A0A061EMW2|A0A061EMW2_THECC3.8e-3861.43Integrase-type DNA-binding superfamily protein OS=Theobroma cacao OX=3641 GN=TCM... [more]
tr|A0A1S2XW82|A0A1S2XW82_CICAR4.6e-3655.80ethylene-responsive transcription factor ERF098 OS=Cicer arietinum OX=3827 GN=LO... [more]
tr|W9R427|W9R427_9ROSA6.0e-3653.75Ethylene-responsive transcription factor OS=Morus notabilis OX=981085 GN=L484_01... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16563-RACarg16563-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 43..59
score: 65.67
coord: 20..31
score: 71.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 19..83
e-value: 1.7E-32
score: 123.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 19..70
e-value: 2.7E-13
score: 49.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 19..77
score: 23.327
IPR001471AP2/ERF domainCDDcd00018AP2coord: 19..77
e-value: 2.19179E-28
score: 100.039
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 3..83
e-value: 2.1E-21
score: 74.6
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 19..79
e-value: 3.8E-30
score: 105.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..120
NoneNo IPR availablePANTHERPTHR31190:SF68ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF098coord: 1..147
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 1..147
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 19..78

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16563Cla021526Watermelon (97103) v1carwmB0223
Carg16563Cla007577Watermelon (97103) v1carwmB0224
Carg16563Csa3G135620Cucumber (Chinese Long) v2carcuB0262
Carg16563Csa2G177220Cucumber (Chinese Long) v2carcuB0261
Carg16563MELO3C022983Melon (DHL92) v3.5.1carmeB0238
Carg16563MELO3C006431Melon (DHL92) v3.5.1carmeB0240
Carg16563CSPI02G10450Wild cucumber (PI 183967)carcpiB0265
Carg16563CSPI03G12030Wild cucumber (PI 183967)carcpiB0266
Carg16563Cucsa.255320Cucumber (Gy14) v1carcgyB0276
Carg16563Cucsa.383680Cucumber (Gy14) v1carcgyB0277
Carg16563CmaCh14G018080Cucurbita maxima (Rimu)carcmaB0325
Carg16563CmaCh17G001680Cucurbita maxima (Rimu)carcmaB0326
Carg16563CmaCh06G013310Cucurbita maxima (Rimu)carcmaB0329
Carg16563CmaCh08G010870Cucurbita maxima (Rimu)carcmaB0330
Carg16563CmoCh08G010630Cucurbita moschata (Rifu)carcmoB0333
Carg16563CmoCh06G013350Cucurbita moschata (Rifu)carcmoB0332
Carg16563CmoCh14G018440Cucurbita moschata (Rifu)carcmoB0328
Carg16563Lsi05G017230Bottle gourd (USVL1VR-Ls)carlsiB210
Carg16563Lsi09G012410Bottle gourd (USVL1VR-Ls)carlsiB209
Carg16563Cp4.1LG03g10140Cucurbita pepo (Zucchini)carcpeB0334
Carg16563Cp4.1LG17g01960Cucurbita pepo (Zucchini)carcpeB0333
Carg16563Cp4.1LG08g03640Cucurbita pepo (Zucchini)carcpeB0336
Carg16563CsGy2G010480Cucumber (Gy14) v2carcgybB0250
Carg16563CsGy3G012160Cucumber (Gy14) v2carcgybB0251
Carg16563MELO3C022983.2Melon (DHL92) v3.6.1carmedB0246
Carg16563MELO3C006431.2Melon (DHL92) v3.6.1carmedB0248
Carg16563CsaV3_3G012180Cucumber (Chinese Long) v3carcucB0266
Carg16563CsaV3_2G012880Cucumber (Chinese Long) v3carcucB0265
Carg16563Cla97C05G085170Watermelon (97103) v2carwmbB0236
Carg16563BhiUN533G39Wax gourdcarwgoB0299
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16563Carg10960Silver-seed gourdcarcarB275
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16563Watermelon (97103) v2carwmbB0237
Carg16563Watermelon (97103) v2carwmbB0238
Carg16563Wax gourdcarwgoB0290
Carg16563Wax gourdcarwgoB0297
Carg16563Silver-seed gourdcarcarB259
Carg16563Silver-seed gourdcarcarB274
Carg16563Silver-seed gourdcarcarB272
Carg16563Silver-seed gourdcarcarB273
Carg16563Cucurbita maxima (Rimu)carcmaB0327
Carg16563Cucurbita moschata (Rifu)carcmoB0329
Carg16563Cucurbita pepo (Zucchini)carcpeB0331
Carg16563Cucurbita pepo (Zucchini)carcpeB0332
Carg16563Cucurbita pepo (Zucchini)carcpeB0335
Carg16563Bottle gourd (USVL1VR-Ls)carlsiB211
Carg16563Watermelon (Charleston Gray)carwcgB0226
Carg16563Watermelon (Charleston Gray)carwcgB0227
Carg16563Watermelon (Charleston Gray)carwcgB0228