Carg16535 (gene) Silver-seed gourd

NameCarg16535
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_089 : 201930 .. 205276 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAATAATTTTGCCCATAAAGAGAACGGCACGTTGCTAACCTTGTCTGCCGACACAATTTGCACCGCGCTTTTGTGCCTATATGCCGATTCTCGAGCCTTGGGAGACATGGGGCAGCGCAATCTAGTGTTTATGTTACTAATTCTTACGCTCATCAGGGCCTTCTTCTGCCCTGCAAACCAGACTTTTCATTTTCTGACTTTTGAGGTGAGAAGTCCCTTTAAGATTGGGTTTGTTTGGTGGGGTGCACACCAAGTGTTTGTAGAAAGTCCCTAAAGATTTGTTCTTCAATTTGGAGTGTCTGGGCTAGTTTTTTTTGCTTTGTGATCGGTTTCAAATATAGGGTATCAGATTGCTAGTTGTATAAACAACAGACTCGTCTCAAGACTCCATCGAATATCCTCTTGATTACGTTCATTACAGCTGAATGTTTCATGCTAAGAAATTCTCTGAGTAGTCTAGGCATTCCCTCGTCTACACCATTCAAATACCTCGAATGAGAAACTACACTAACATTTTTCTTGATGTAAGTATCATCCGACGCCCCCAACAGGATGACAGCACAAAAATTTGTTCCTAAAACACGAAGGTGACATTGTTATTCACTTTCATCCTTGATTATGTAGCACATGAATATCTAGTAATGCTTGAAGTAATCTCCACAATATACATTGCGATCATATTGATCATGAAAATATTGTGAAATCTTCCTACATGATCAACATTCATCGAATGGATCAATCGACCAAGTTGTTGCAATTCAATCATATGACTAATCTCTTGTAAGGTATAGGACTGAGTTATGACTATATGAACAAAATGAACAAACGAGAAAGAAATTTCGGTCACTCGAGCTGCAAGAGAAAGGTAGAAATTCTTTCCTCTTTCCTTTCCAGTCATGATACAACCATTTATGAATTTTAGTGTTGTGACCATTTGTTTGAATCAGGACCGATATGATATCTATCTACCACAAGAATGAAGAGATGGGGTACATACAAAAAGAAAGAAGAGACAAGATTCCGTCACTCCAGGTTTGTCCAGTCATTGTATGCTGACATGCAATAAATCAGTTCAACATTTGCCCTTGTGCTTGTGATCCTTCAGCCAAGCTTACACTTAATACCCTGCCTTCAAATACCTATGAAGTCCAAAGAACAAACAATTGAACCATATGATATTGTATGATATAAAAACAATGTGAACGAAAAGATACAGGAGAACCAAGGCAGACTCTTACCGCGTCATTAAGAGCGACAAGAGCTGTTTCCATCTCTGATTTTGTTGAGTAAGAAACAAAGCCATAACCACGTGACCTTCCGGTCTCCCCGTTATAGATGACCCTTGCTCCTACCACATTTCCATATTCTTGAAATGCTTGTGTCAAACTTTCTGATGTTACTGACCAAGCTAAGTTTCGAACAAAGAGTTTATACTCAGTTTCTGGAAACAAATGTTCCTTGGGCTTAGGTTTGTCTGAGAAATTAACCCTCAGAATTCTGCCCATATAAGTCTGATTATACAAGTGATACTCATAGTTAGCATCAGAGTCCAATAGTTCCTGAACTTAAAACTATCTAAGGATAGATATAGCCACATAAAGGAGAGAACGAAAGTGTGTGAGGGAGAGATTCTCACAGCTCCATTCAGATTTTCAATGACTTTATTGCAATCATCAATACTGTTCATGGTTACAAATGCGAATCCTCTACTTTTTCCAGTATCCCTGTCATACAGAACCTTATACCACTTGAATTGATTAGAGACTCTTACAAAACATGAGATTTAATATGAAAATATGCTCTTGGAGAAGTAGTTCAAAGTAAAGATTGAATGAAAACAGTAGAGAAGTCTGTTTTAAGGATTAGATAAATGAAATTGCTACATTGGATCTTTTCTTAAAGCGCCACAGGAGTCTCTGAGTTTAATATATCAATCTTCCTTTTACAAGGATGTCCTTTTTTTTTTTTTTTTTTTTAACTTTTTATTAAGAGGTGGATCGAGCCACGGTGAAAACAATAAAGGCCATCAACAGAAAGCCTTATCCACACAAACAGCATCTTGAAATTTCTCAACTAGGATGGATGAGGAGCTACAGAGTTCCTTTGAACTCGAGCCTTCATTGCAAGGATGAAAGTAGATACCCTGTGTTATGACTTCAATTAAGGTTAATAGGTTTTCTTCCTAATATCTACTAATGTCAAAACCAACTTAGGCATGATACAACTAATCTCATGGAACAATAGCCCAACTTTACTGCATTTGGCTGTTCAAAAAGCTTGTAGGACACTAATCTTAGATGGATGACCACCATGATTTGAATCCGTTCCTTCAAAGTCTTTTGCCTTTTCACTTGTTCTTAATGATCACTAGATTAACTCTGGTGGTGGTTAATTAATGAAGGTAAAGGAAGGTCAGCAGCTATTTATGAAAACATCCCCACAAATTTGTACAAACAGAGAGCACGTTCTTCAAATGTATAATATATTGGATATCATCTTGGCACAGTAGCACCATAGTAACATGATCATGCTCTTCTATAATGGACACTTTCCATAAACCCACTTGTTGAATGTCTCATGGTGTTTGTGCAGCTTGGTAGAACAAAGAATAGCTCATTGGATCAACGTGTAGATGCCACCAAAAACCCAACCTACATGCCCCTAAACAGGCTAGTGGATGTTCAGTGGATGTTTGAACTAATTATAGGCATCTCAATTTTCGTTCTACCATATGATTTGAGGTAATTACTTCAAAAATATCTAGATTTGTGGTTTAGATTTATAGTCATGAGCTTGAATTCCAAAGCAAAGCTTTCATGTCATGCCATTAATGAAAGTGAAATCATGTATGAGAATTCCATGTAGAAACTAATCAGTGAACTTTGCAGGCAATGTACCTCAATAAGCTCGGCGACCCCATAATCCTGAACGATAGCCGCAAGCTGGGGACTATCAACACTATAAGGCAAATTCCCAAAATACAGCTTAGTACTCCCGGACTCCACTGGAGAACCACCATCCACCGCCTCCCCTCCTTCCTTCTCCGCACCCTCTTCAACCCCCACCGTCAAAGCCGCCTCTCCTTGCACAAAGGTGGCCGAGATGATCGTAGCCGGGCGACACCTCTCTGAGAAAGCTCTAAGCGGAGCCGATTTAACGGCCAGAGGGCGGGACAGTAAGGGCAACACCTGGGTAGATGGGGTTGCAAGGGGAGAATCGGAGAGCCAGGGATTGGACCGTGAACCCCTTATGGGAGTGGTGAAGAAGGAGACTCCGGTAGCGGCGGCGGGCATTGTAGTGGAATTGGATAGGGAGGAGATGGGTAGCAGCGGACGAGAGTAG

mRNA sequence

ATGCATAATAATTTTGCCCATAAAGAGAACGGCACGTTGCTAACCTTGTCTGCCGACACAATTTGCACCGCGCTTTTGTGCCTATATGCCGATTCTCGAGCCTTGGGAGACATGGGGCAGCGCAATCTAGTGACCGATATGATATCTATCTACCACAAGAATGAAGAGATGGGGTACATACAAAAAGAAAGAAGAGACAAGATTCCGTCACTCCAGGTGGATCGAGCCACGGTGAAAACAATAAAGGCCATCAACAGAAAGCCTTATCCACACAAACAGCATCTTGAAATTTCTCAACTAGGATGGATGAGGAGCTACAGACTTGGTAGAACAAAGAATAGCTCATTGGATCAACGTGTAGATGCCACCAAAAACCCAACCTACATGCCCCTAAACAGGCTAGTGGATGTTCAGTGGATGTTTGAACTAATTATAGGCATCTCAATTTTCGTTCTACCATATGATTTGAGATTTATAGTCATGAGCTTGAATTCCAAAGCAAAGCTTTCATGTCATGCCATTAATGAAATACTCCCGGACTCCACTGGAGAACCACCATCCACCGCCTCCCCTCCTTCCTTCTCCGCACCCTCTTCAACCCCCACCGTCAAAGCCGCCTCTCCTTGCACAAAGGTGGCCGAGATGATCGTAGCCGGGCGACACCTCTCTGAGAAAGCTCTAAGCGGAGCCGATTTAACGGCCAGAGGGCGGGACAGTAAGGGCAACACCTGGGTAGATGGGGTTGCAAGGGGAGAATCGGAGAGCCAGGGATTGGACCGTGAACCCCTTATGGGAGTGGTGAAGAAGGAGACTCCGGTAGCGGCGGCGGGCATTGTAGTGGAATTGGATAGGGAGGAGATGGGTAGCAGCGGACGAGAGTAG

Coding sequence (CDS)

ATGCATAATAATTTTGCCCATAAAGAGAACGGCACGTTGCTAACCTTGTCTGCCGACACAATTTGCACCGCGCTTTTGTGCCTATATGCCGATTCTCGAGCCTTGGGAGACATGGGGCAGCGCAATCTAGTGACCGATATGATATCTATCTACCACAAGAATGAAGAGATGGGGTACATACAAAAAGAAAGAAGAGACAAGATTCCGTCACTCCAGGTGGATCGAGCCACGGTGAAAACAATAAAGGCCATCAACAGAAAGCCTTATCCACACAAACAGCATCTTGAAATTTCTCAACTAGGATGGATGAGGAGCTACAGACTTGGTAGAACAAAGAATAGCTCATTGGATCAACGTGTAGATGCCACCAAAAACCCAACCTACATGCCCCTAAACAGGCTAGTGGATGTTCAGTGGATGTTTGAACTAATTATAGGCATCTCAATTTTCGTTCTACCATATGATTTGAGATTTATAGTCATGAGCTTGAATTCCAAAGCAAAGCTTTCATGTCATGCCATTAATGAAATACTCCCGGACTCCACTGGAGAACCACCATCCACCGCCTCCCCTCCTTCCTTCTCCGCACCCTCTTCAACCCCCACCGTCAAAGCCGCCTCTCCTTGCACAAAGGTGGCCGAGATGATCGTAGCCGGGCGACACCTCTCTGAGAAAGCTCTAAGCGGAGCCGATTTAACGGCCAGAGGGCGGGACAGTAAGGGCAACACCTGGGTAGATGGGGTTGCAAGGGGAGAATCGGAGAGCCAGGGATTGGACCGTGAACCCCTTATGGGAGTGGTGAAGAAGGAGACTCCGGTAGCGGCGGCGGGCATTGTAGTGGAATTGGATAGGGAGGAGATGGGTAGCAGCGGACGAGAGTAG

Protein sequence

MHNNFAHKENGTLLTLSADTICTALLCLYADSRALGDMGQRNLVTDMISIYHKNEEMGYIQKERRDKIPSLQVDRATVKTIKAINRKPYPHKQHLEISQLGWMRSYRLGRTKNSSLDQRVDATKNPTYMPLNRLVDVQWMFELIIGISIFVLPYDLRFIVMSLNSKAKLSCHAINEILPDSTGEPPSTASPPSFSAPSSTPTVKAASPCTKVAEMIVAGRHLSEKALSGADLTARGRDSKGNTWVDGVARGESESQGLDREPLMGVVKKETPVAAAGIVVELDREEMGSSGRE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16535-RACarg16535-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..205

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16535CmoCh14G018880Cucurbita moschata (Rifu)carcmoB0328
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16535Silver-seed gourdcarcarB259
Carg16535Silver-seed gourdcarcarB274
Carg16535Silver-seed gourdcarcarB272
Carg16535Silver-seed gourdcarcarB273
Carg16535Silver-seed gourdcarcarB275
Carg16535Cucumber (Gy14) v2carcgybB0251
Carg16535Cucumber (Gy14) v2carcgybB0250
Carg16535Cucumber (Gy14) v2carcgybB0252
Carg16535Cucumber (Gy14) v1carcgyB0275
Carg16535Cucumber (Gy14) v1carcgyB0276
Carg16535Cucumber (Gy14) v1carcgyB0277
Carg16535Cucurbita maxima (Rimu)carcmaB0325
Carg16535Cucurbita maxima (Rimu)carcmaB0326
Carg16535Cucurbita maxima (Rimu)carcmaB0327
Carg16535Cucurbita maxima (Rimu)carcmaB0328
Carg16535Cucurbita maxima (Rimu)carcmaB0329
Carg16535Cucurbita maxima (Rimu)carcmaB0330
Carg16535Cucurbita moschata (Rifu)carcmoB0329
Carg16535Cucurbita moschata (Rifu)carcmoB0330
Carg16535Cucurbita moschata (Rifu)carcmoB0331
Carg16535Cucurbita moschata (Rifu)carcmoB0332
Carg16535Cucurbita moschata (Rifu)carcmoB0333
Carg16535Cucurbita pepo (Zucchini)carcpeB0331
Carg16535Cucurbita pepo (Zucchini)carcpeB0332
Carg16535Cucurbita pepo (Zucchini)carcpeB0333
Carg16535Cucurbita pepo (Zucchini)carcpeB0334
Carg16535Cucurbita pepo (Zucchini)carcpeB0335
Carg16535Cucurbita pepo (Zucchini)carcpeB0336
Carg16535Wild cucumber (PI 183967)carcpiB0265
Carg16535Wild cucumber (PI 183967)carcpiB0266
Carg16535Wild cucumber (PI 183967)carcpiB0267
Carg16535Cucumber (Chinese Long) v2carcuB0261
Carg16535Cucumber (Chinese Long) v2carcuB0262
Carg16535Cucumber (Chinese Long) v2carcuB0263
Carg16535Cucumber (Chinese Long) v3carcucB0265
Carg16535Cucumber (Chinese Long) v3carcucB0266
Carg16535Cucumber (Chinese Long) v3carcucB0267
Carg16535Bottle gourd (USVL1VR-Ls)carlsiB209
Carg16535Bottle gourd (USVL1VR-Ls)carlsiB210
Carg16535Bottle gourd (USVL1VR-Ls)carlsiB211
Carg16535Melon (DHL92) v3.5.1carmeB0238
Carg16535Melon (DHL92) v3.5.1carmeB0240
Carg16535Melon (DHL92) v3.6.1carmedB0246
Carg16535Melon (DHL92) v3.6.1carmedB0248
Carg16535Watermelon (Charleston Gray)carwcgB0226
Carg16535Watermelon (Charleston Gray)carwcgB0227
Carg16535Watermelon (Charleston Gray)carwcgB0228
Carg16535Watermelon (97103) v1carwmB0222
Carg16535Watermelon (97103) v1carwmB0223
Carg16535Watermelon (97103) v1carwmB0224
Carg16535Watermelon (97103) v2carwmbB0236
Carg16535Watermelon (97103) v2carwmbB0237
Carg16535Watermelon (97103) v2carwmbB0238
Carg16535Wax gourdcarwgoB0290
Carg16535Wax gourdcarwgoB0292
Carg16535Wax gourdcarwgoB0297