Carg16478 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16478
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin-responsive protein
Location	Cucurbita_argyrosperma_scaffold_130 : 888783 .. 894212 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTATATTATTTTCTCCTCATCCTCCATACCCACTTCTTTCCCCTAAACACACAGAGAGTGAAAATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAGTATTATTCCTTCTCCTTTTTTATTTTATTTTTTTTAATTATTTTTAAATAAAACAATAAAAGCTTTTAAAGCTAAAAGGGTTAGTAAAGTAATTTTATGGGGTTTTTTTTTAAAAATTTTTAAAAGAAAAGGAATTTTAATTAATGCCAATTTCATTACTAATTAAAAAATCAAATATATATGCATTAATTTTTTTTTTAATATAATTTATAATTTATTTAGAGAAAAAATGGAGTTAAAAATTAAAATTATAAATGATAATGTTTTTGTGGGCTTCAATAATTGAGTTGAGAAGAGGAAGAAAGGATGACCAAGTAAACAAAAGGTTATTATTGTGGTTTCGAATTTAAAGGAATTTATTATTATTATTATTATTATTATTATTATTTACTTATTTTTGTTGTCGGGAAAACATAGGAAAACTACAAAACATTTGGAATCTTTTTTTCTTTTTTTTTTACATTAAACTACAAATTATTCGTATAATTTTTAAAATAATTACTAATTCTAAGTTTTGAGTTTGTAATTATTCTTTTTTTAGTATTTTCTTTTATAAAAAAAATAATTGTTTTTTCCTAAAAGCATTTTAATTTTCCATAGAGAGTAATTAAGTAATATACTTTTTAAAAAGCATTTATTTTTTTTTTTTAATTTTTTAATACTCGAATTTGATTATTATGAACTTATTTTCTTTTGGTTGAATTTAAATAAATAAAAAATTTATGGACTAAGTTGATTTATAGGTTCAATTAAAATTTATTGCTAATTTTAAAAAATACATTTTTATTTACTATATATTATTATTATTTTTTCTCAAATCATTTTTAAATTTTATTTTTAATTGTTTAGAAGGTAACTTTTAATTAAATGTCGGGAAATAAATAAATAAATGTTTACTAAATATCACTTTTTATTAAAGGTTTATTATTTAATAGAAGTTGTTTGAGTTTAAAAAATTTACATTGATTTTTTAAAATTACCCAACTGACAAGCACACGGTTTTTTTTTACTTTTATCATCCTAACTTAACGTTTTAAATGAACTCGTGTCTAAAATTTTGAATTTCTACTCTAATTACCTAAATTTGAAATTTTTTACCGTGCTTACCTTTAATTCATATTCATAAATATTATTTAATCTTCCAAAAACGTCTTTTGGCATCACCAAAGGCCAATAATTATCTAATTTCCTTTAAATATAACAATTTGAGATAATGACATGACAATAAAAAGAAAGAATAATAATAATAATAATAATAATTATTATTATTAAAAAAAACAATATAAACCCAATTGAAATTAAATACAATTTCCAAAATTATTAACGGTGAAAATTTTATAATATTATTTTTAACAGAGCTCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAAAATTCCAACTTACTTTTTTACTTTTACTGTCTCGGAATTTGATAGAAAAGTTTGAAATATTGAGTTCAAATGACTCGACAATCTGACTAGCTCGAGCTAACCAACTCAAACCATATAATTTGAGTCCAATTTTTTGAAAATCGAAAACTCGAGCGGGTTAGTAGGTTAAAAATTGAGTTAACCCTACTCTACTTTTAAAATTATTATGGATATATACATTTCTAACCGATATTAGTGATACATTGTGACTTATGAATGAAACGGGTACGGTGGATAAGTAGAATTTTTCAATAATTAAAAAGTAAAAAGAACAATCCGAGTTGCTCGGGTCTCCAAATTCGAGATGGTTTAAAAGATTTTCTCAACCCGTGTACACTCCTACAAAATATCAGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAATCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAAGTAAGTCCTACTCCGCTTATTTGTTTATTTATTTATTTTCTTTAATTAATTATATATTAAAAAAAAATTAATCATTTTTATTGTTTAATTCGACAGTATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGGTAAGTTAATAAATATTTTGTTATATAATTTGGGATAAAAGTAAATATTTTAAAGTTTAATGCTAAAATTATTATTATTATTTTATATTTTAAATTGATATTTAATAAGTTTACAAATATTATTTGAATTATTTATTTATTTTTGTTTACAAATAAAATTATTTGGATAATGTAAATTAATATATAGATTGTTAATTTTACAGCCCCAAGAGCATTGGAGAAGTGCAAGACCAGAAACTGAATTACTAATATTAGGATATTATTTTTCTTGAATAATAATAATAATAATTTATTATTATTAGGATTTGGTAGTTTGCAAATAATTTCCAAAAATTATAATAATAATAAAAAAAATGAAACCCTACTCAATAGAGGAAGGAATTTGAATCTCATGTGTAACATATATTTTTTTTTCCATGTAATTATTATATAAATGAAATATTTCTCGTGTTTATATATTATATTAATTAATATCTACTGAACTCGTCGTAGTAACTAAACAAGATCGAGTGATTCTAATTTAATTATAGATTTAGTCGGAAAATTTTTAGATTTGTTTAATTAAAAGTTTTTAAATATTTTATTTTATGTCAGGTAGGTTTTTGACACAATTTAATATTTGTTTAATTAACTATCAAGTAAAATAAAATGAGTGTAATAATAGCGTTTTTTTTAATACAATATTGAAATATTTTAAAAATATATATGTATTTAATTTTTTTAAAAAAACAAGATTTTATGAAATACAATTTTAAAAAATTTAAAAATTAAACGATCAAAACACATTATCACTTAATTATAAATAGACGATTAAAAAAAAATTGTAAAAATTTAAAATAGTTTTTTTCCTTTCCCCAGGTCCAATAAAAGAATTAATAGTAACGTGTGGGGTGTAATTTAAATACGAGAAATAAAAGGATGAGGTTGCAAATTTCTTTCTTAAACCCCCCAAAACCCTAATCTCTGCTACTTTATAAATAACAGAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGGTACTTCTCTCTCTCTCTCTCTCTGTATCTCGTCGTCGTCTTCTTCTTCTCTGTTGAAGTATTTTATTTTGCCCTAGAAATTGAGATTGTTGGATCTGCAAAAGCACATATCGAAGGTTTTCAGGTTCATTTCATAAATGCCTGCTTAGCTCAAAATTTGTGCGATATTATTTGCTTGTCTATGGCTCTCCTTAGTACGTCCTTTGGAGTCTAAGGCCGGCTTTGTGTCCGGCCTCCAGGGGATTTGGGAGTCATGACGAACATTTGCTTATTTCTCTTCCAACTTTCATTCATGGGGTTTTTCTTCAGTTTCTTTTTTAGATTGTTGTATTAAGATGGAGATGTAGGGAGATTCTATTAATTGTTTCATTTTTTATTGTTAATGCTTGTCAATATGATTTAGATTGTTAGTATTTATTAAGAGTGTCGTAAGCTGCACGTATCTGTAGGTTTTAGTTTGATTTTTTTTTTCTCTGGATTCCGGCGTAGCTAGCAAGAGTAATGGGGAAAATACGGTTGTTTACTGGTAAATGGTCTTTGTAAGGACGGATTTTCAAGGAATCAGTTCTGAAATATGCGATCTAATGGGGAATTGTGTTTTCAAGACACTCGTACTAGTCAAACATGTCTTGTATACAAATATCATAATTGAGCTTCGAAGAATATCAAGGAAATTGTGGATTAGGTGAACGTTTTTGTACCAAGGAAATTGTGCGTAACAAGATTATTAACTTACTAAGAACTATGCGAACTTGACATCATTCTTGAAATCTCCATATTTTTGTGTTTTATCTTTTGAAGCATCTGTAAGCTAAGGATTTTGATTTGACAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGATTGGGAAGATGAAAGCAGGGTGTGATGGAGATGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAGATTTCACAAGGGGTAATGGAACAGGAGGAGAATCAATCTATGGCATGAAGTTTGCAGATGAAAACTACAAGATGAAACACACCGGACCGGGTGTACTATCAATGGCGAATTCTGGACAGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATGGTGGGAGGACTTCTGAAACTGTTGTGATAGAGGACTGCGGGCAGATAGATAGCATCTAGAGTTGAAGTTAGAATCGTTTGATCTTAGAAAATTCCCCTTTCTGAGCTCTCATGGCTGCCCAGCCCAATAAAACTCATTCAAGTTAACAAGAACACGTCGAAAGGTGTCTGGGATGGAGAAATTCACTTTTAAGAGATACTGAGATTGGTAGCCTTTTCTCCTTCCTTCGACTCGTGAATAGGTATCAAAGTTAGTAGCTAGAAGGGACAAGTCTTAGATACCGAGATGAGTAGGTATCAAAGTTAGTAGCTGACTCGAGAGTAGATATCGAGTTGTATGAGTAGCTTTTCTCGAGAATCCGGTATCGAAAATAGGTATCAAAGTTGTTAAAGATTACGTATTTCCTTTTAGATTGACGCGGTGAGTTGATATCGAATGAGTAATCTCCGTTCCGAGTCGAGATTTGTTTTTATGTTTAGATTTACTCGAGATTAGGATTAGAGTTAGTGTTTT

mRNA sequence

TATTATATTATTTTCTCCTCATCCTCCATACCCACTTCTTTCCCCTAAACACACAGAGAGTGAAAATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAAGCTCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAATCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGATTGGGAAGATGAAAGCAGGGTGTGATGGAGATGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAGATTTCACAAGGGGTAATGGAACAGGAGGAGAATCAATCTATGGCATGAAGTTTGCAGATGAAAACTACAAGATGAAACACACCGGACCGGGTGTACTATCAATGGCGAATTCTGGACAGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATGGTGGGAGGACTTCTGAAACTGTTGTGATAGAGGACTGCGGGCAGATAGATAGCATCTAGAGTTGAAGTTAGAATCGTTTGATCTTAGAAAATTCCCCTTTCTGAGCTCTCATGGCTGCCCAGCCCAATAAAACTCATTCAAGTTAACAAGAACACGTCGAAAGGTGTCTGGGATGGAGAAATTCACTTTTAAGAGATACTGAGATTGGTAGCCTTTTCTCCTTCCTTCGACTCGTGAATAGGTATCAAAGTTAGTAGCTAGAAGGGACAAGTCTTAGATACCGAGATGAGTAGGTATCAAAGTTAGTAGCTGACTCGAGAGTAGATATCGAGTTGTATGAGTAGCTTTTCTCGAGAATCCGGTATCGAAAATAGGTATCAAAGTTGTTAAAGATTACGTATTTCCTTTTAGATTGACGCGGTGAGTTGATATCGAATGAGTAATCTCCGTTCCGAGTCGAGATTTGTTTTTATGTTTAGATTTACTCGAGATTAGGATTAGAGTTAGTGTTTT

Coding sequence (CDS)

ATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAAGCTCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAATCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGA

Protein sequence

MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGLESSVISIAFWPWRSVLPSPSKSVLAENDVEPKSIL

Homology

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BLAST of Carg16478 vs. NCBI nr
Match: XP_022925407.1 (auxin-responsive protein IAA16-like [Cucurbita moschata])

HSP 1 Score: 413.3 bits (1061), Expect = 5.8e-112
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTD 60
           MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTD
Sbjct: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTD 60

Query: 61  LPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSMDGAPYL 120
           LPKPP PKAQVVGWPPVKSLRRNIVAPK STEETEKGATVSGCADAAAFIKVSMDGAPYL
Sbjct: 61  LPKPPXPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGCADAAAFIKVSMDGAPYL 120

Query: 121 RKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYVPTYEDK 180
           RKVDMKM+GSYQELSDALSKMFASFTTGN G QKMKNYANESKSMDVRNET+YVPTYEDK
Sbjct: 121 RKVDMKMFGSYQELSDALSKMFASFTTGNSGAQKMKNYANESKSMDVRNETDYVPTYEDK 180

Query: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           DGDWMLVGDVPWNMFVDSCKRLRIMKGF+AIGL
Sbjct: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKGFEAIGL 213

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BLAST of Carg16478 vs. NCBI nr
Match: XP_023531478.1 (auxin-responsive protein IAA16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 1.7e-111
Identity = 206/213 (96.71%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTD 60
           MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSV TD
Sbjct: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVRTD 60

Query: 61  LPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSMDGAPYL 120
           LPKPPPPKAQVVGWPPVKSLRRNIVAPK STEETEKGATVSG ADAAAFIKVSMDGAPYL
Sbjct: 61  LPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGADAAAFIKVSMDGAPYL 120

Query: 121 RKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYVPTYEDK 180
           RKVDMKMYGSYQELSDALSKMFASFTTGNCG QKMKNYANESKSMDVRNET+YVPTYEDK
Sbjct: 121 RKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYANESKSMDVRNETDYVPTYEDK 180

Query: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           DGDWMLVGDVPWNMFVDSCKRLRIMKG +AIGL
Sbjct: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKGMEAIGL 213

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BLAST of Carg16478 vs. NCBI nr
Match: XP_022965557.1 (auxin-responsive protein IAA16-like [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 198/213 (92.96%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTD 60
           MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQR KTTD NAVS+SVGTD
Sbjct: 1   MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVSSSVGTD 60

Query: 61  LPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSMDGAPYL 120
            PKPPPPKAQVVGWPPVKSLRRNIVAPK STEETEKGATVSG +DAA FIKVSMDGAPYL
Sbjct: 61  RPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVFIKVSMDGAPYL 120

Query: 121 RKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYVPTYEDK 180
           RKVDMKMYGSYQELSDALSKMFASFTTGNCG QKMKNY NESKSMDVRN+T+YVPTYEDK
Sbjct: 121 RKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDYVPTYEDK 180

Query: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           DGDWMLVGDVPWNMFVDSCKRLRIMK F+ IGL
Sbjct: 181 DGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGL 213

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BLAST of Carg16478 vs. NCBI nr
Match: XP_004142529.1 (PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus] >KGN66786.1 hypothetical protein Csa_1G690240 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85
Identity = 167/224 (74.55%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGSL+ FE+TELRLGLPG      GDAVKKRGFT+T+DLKLN+  DS+Q  KTTD N VS
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAP--KTSTEETEKGATVSG---CADAAAF 120
           + V  DLPKPPP KAQVVGWPPVKSLRRNIV P  K   EETEK A +SG      AAAF
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVGAAAF 120

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRN 180
           IKVSMDGAPYLRKVD+KMYGSYQELSDAL KMFASFT G CG QKM++Y NE K +DV N
Sbjct: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVSN 180

Query: 181 ETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
            ++YVPTYEDKDGDWMLVGDVPW+MFVDSCKRLRIMKG +AIGL
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 224

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BLAST of Carg16478 vs. NCBI nr
Match: XP_022155103.1 (auxin-responsive protein IAA16-like [Momordica charantia])

HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85
Identity = 168/221 (76.02%), Postives = 185/221 (83.71%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPG-------GDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAV 60
           MGSLIDFE+TELRLGLPG       GDAVKKRGFT+T+DLKLNL +  D+  KTT   AV
Sbjct: 1   MGSLIDFEETELRLGLPGGDGGRGDGDAVKKRGFTETVDLKLNLLSKPDEGHKTTHKIAV 60

Query: 61  STSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGC-ADAAAFIKV 120
           S+SV  DLPKPPP KAQVVGWPPVKSLRRNIVAPK S EET+ G    GC A AAAFIKV
Sbjct: 61  SSSVAKDLPKPPPAKAQVVGWPPVKSLRRNIVAPKKSIEETKNGG--GGCSAGAAAFIKV 120

Query: 121 SMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETE 180
           SMDGAPYLRKVD+KMYGSY++ S+ALS MF SFTTGNCG QKMK+Y NESK +DV N ++
Sbjct: 121 SMDGAPYLRKVDLKMYGSYRDFSNALSNMFGSFTTGNCGPQKMKDYMNESKLIDVLNGSD 180

Query: 181 YVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           YVPTYEDKDGDWMLVGDVPW+MFVDSCKRLRIMKG +AIGL
Sbjct: 181 YVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 219

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BLAST of Carg16478 vs. TAIR10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16)

HSP 1 Score: 231.9 bits (590), Expect = 4.3e-61
Identity = 128/230 (55.65%), Postives = 163/230 (70.87%), Query Frame = 0


Query: 4   LIDFEQTELRLGLPGGD-----AVK---KRGFTQTLDLKLNLAADSDQRPKTTDTNAVST 63
           +I+FE TELRLGLPGG+     A K   KRGF++T+DLKLNL++ +       D   +  
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE 60

Query: 64  SVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPK--TSTEETEKGATVSG----------C 123
            V       PP KAQVVGWPPV+S R+N+++ +  T+ + TE     SG          C
Sbjct: 61  KV-----VKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSXXXXXXXSAC 120

Query: 124 ADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESK 183
           A   A++KVSMDGAPYLRK+D+K+Y +YQ+LS+ALSKMF+SFT GN G Q MK++ NESK
Sbjct: 121 A-TVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 180

Query: 184 SMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
            +D+ N ++YVPTYEDKDGDWMLVGDVPW MFVDSCKR+RIMKG +AIGL
Sbjct: 181 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

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BLAST of Carg16478 vs. TAIR10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-60
Identity = 121/219 (55.25%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 5   IDFEQTELRLGLPGGDAV----------KKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 64
           ++ ++TEL LGLPGG              KRGF++T+DLKLNL ++           A  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 65  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSM 124
                  P  PP KAQVVGWPPV++ R+N++A + S E  E    +S      AF+KVSM
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE---AMSSGGGTVAFVKVSM 120

Query: 125 DGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYV 184
           DGAPYLRKVD+KMY SY++LSDAL+KMF+SFT G+ G Q M ++ NESK MD+ N +EYV
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 185 PTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           P+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +AIGL
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

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BLAST of Carg16478 vs. TAIR10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 218.8 bits (556), Expect = 3.8e-57
Identity = 123/225 (54.67%), Postives = 158/225 (70.22%), Query Frame = 0


Query: 1   MGSL-IDFEQTELRLGLPGGDAV-----KKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGS+ ++  +TEL LGLPGGD V      KRGF++T+DLKLNL  +   +  +T  + V+
Sbjct: 2   MGSVELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVT 61

Query: 61  -----TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAF 120
                 S     P  PP KAQVVGWPPV+S R+N++    S +++      SG  +AAAF
Sbjct: 62  FDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVM---VSCQKS------SGGPEAAAF 121

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQK-MKNYANESKSMDVR 180
           +KVSMDGAPYLRK+D++MY SY ELS+ALS MF+SFT G  G ++ M ++ NE K MD+ 
Sbjct: 122 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 181

Query: 181 NETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           N  +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKG  AIGL
Sbjct: 182 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

[Close]

BLAST of Carg16478 vs. TAIR10
Match: AT3G23050.1 (indole-3-acetic acid 7)

HSP 1 Score: 217.6 bits (553), Expect = 8.5e-57
Identity = 120/229 (52.40%), Postives = 154/229 (67.25%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPGG-DAVK---------KRGFTQTLDLKLNLAADSDQRPKTTDT 60
           +G L++ + TEL LGLPGG +AV+         KRGF++T+DL LNL ++ +      + 
Sbjct: 2   IGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNV 61

Query: 61  NAVSTSVGT-DLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCAD---- 120
           +AV     T   P  PP KAQVVGWPPV++ R+N++  +                     
Sbjct: 62  SAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQXXXXXXXXXXXXXXXXXXXXX 121

Query: 121 -AAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKS 180
             A  +KVSMDGAPYLRKVD+KMY SYQ+LSDAL+KMF+SFT GN G Q M ++ NESK 
Sbjct: 122 AGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKL 181

Query: 181 MDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           M++ N +EYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +A+GL
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

[Close]

BLAST of Carg16478 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2)

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-41
Identity = 106/261 (40.61%), Postives = 137/261 (52.49%), Query Frame = 0


Query: 5   IDFEQTELRLGLPGGDAVK-------------------KRGFTQTLDLKLNLAADSDQRP 64
           ++F+ TELRLGLPG ++ +                   KR F+  ++             
Sbjct: 38  LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTT 97

Query: 65  KTTD--------TNAVSTSVGTDLPKP-------------PPPKAQVVGWPPVKSLRRNI 124
            T D        T+ V     T   KP             P  KAQVVGWPP++S R+N 
Sbjct: 98  ATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNS 157

Query: 125 VAPKTS-----TEETEKGATVSGCADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALS 184
           +A   S       ETE+    SG      ++KVSM+GAPYLRK+D+K Y SY ELS AL 
Sbjct: 158 MASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALE 217

Query: 185 KMFASFTTGNCGTQK--MKNYANESKSMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVD 219
           KMF+ FT G  G+     ++  NES+  D+   +EYV TYEDKD DWMLVGDVPW MF+ 
Sbjct: 218 KMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFIC 277

[Close]

BLAST of Carg16478 vs. Swiss-Prot
Match: sp|O24407|IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.8e-60
Identity = 128/230 (55.65%), Postives = 163/230 (70.87%), Query Frame = 0


Query: 4   LIDFEQTELRLGLPGGD-----AVK---KRGFTQTLDLKLNLAADSDQRPKTTDTNAVST 63
           +I+FE TELRLGLPGG+     A K   KRGF++T+DLKLNL++ +       D   +  
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE 60

Query: 64  SVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPK--TSTEETEKGATVSG----------C 123
            V       PP KAQVVGWPPV+S R+N+++ +  T+ + TE     SG          C
Sbjct: 61  KV-----VKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSXXXXXXXSAC 120

Query: 124 ADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESK 183
           A   A++KVSMDGAPYLRK+D+K+Y +YQ+LS+ALSKMF+SFT GN G Q MK++ NESK
Sbjct: 121 A-TVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 180

Query: 184 SMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
            +D+ N ++YVPTYEDKDGDWMLVGDVPW MFVDSCKR+RIMKG +AIGL
Sbjct: 181 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

[Close]

BLAST of Carg16478 vs. Swiss-Prot
Match: sp|Q38832|IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 3.9e-59
Identity = 121/219 (55.25%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 5   IDFEQTELRLGLPGGDAV----------KKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 64
           ++ ++TEL LGLPGG              KRGF++T+DLKLNL ++           A  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 65  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSM 124
                  P  PP KAQVVGWPPV++ R+N++A + S E  E    +S      AF+KVSM
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE---AMSSGGGTVAFVKVSM 120

Query: 125 DGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEYV 184
           DGAPYLRKVD+KMY SY++LSDAL+KMF+SFT G+ G Q M ++ NESK MD+ N +EYV
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 185 PTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           P+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +AIGL
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

[Close]

BLAST of Carg16478 vs. Swiss-Prot
Match: sp|P13089|AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58
Identity = 129/233 (55.36%), Postives = 160/233 (68.67%), Query Frame = 0


Query: 7   FEQTELRLGLPGGDA-----VKKRGFTQ-----------TLDLKLNL---------AADS 66
           FE+TELRLGLPG        ++KRGF++           T+DL LNL         AA +
Sbjct: 3   FEETELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAA 62

Query: 67  DQRPKTTDTNAVSTSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTST-EETEKGATV 126
           D   K        T +  D P  PP K QVVGWPPV+S R+N++A + S  EE+EK ++ 
Sbjct: 63  DPTDKHKTLPKEKTLLPAD-PAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSP 122

Query: 127 SGCADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYAN 186
           +     A+F+KVSMDGAPYLRKVD+KMY SY+ELSD+L KMF+SFT GNC +Q MK++ N
Sbjct: 123 N-----ASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMN 182

Query: 187 ESKSMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           ESK  D+ N ++YVPTYEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +AIGL
Sbjct: 183 ESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGL 229

[Close]

BLAST of Carg16478 vs. Swiss-Prot
Match: sp|P93830|IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 6.9e-56
Identity = 123/225 (54.67%), Postives = 158/225 (70.22%), Query Frame = 0


Query: 1   MGSL-IDFEQTELRLGLPGGDAV-----KKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGS+ ++  +TEL LGLPGGD V      KRGF++T+DLKLNL  +   +  +T  + V+
Sbjct: 2   MGSVELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVT 61

Query: 61  -----TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAF 120
                 S     P  PP KAQVVGWPPV+S R+N++    S +++      SG  +AAAF
Sbjct: 62  FDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVM---VSCQKS------SGGPEAAAF 121

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQK-MKNYANESKSMDVR 180
           +KVSMDGAPYLRK+D++MY SY ELS+ALS MF+SFT G  G ++ M ++ NE K MD+ 
Sbjct: 122 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 181

Query: 181 NETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           N  +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKG  AIGL
Sbjct: 182 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

[Close]

BLAST of Carg16478 vs. Swiss-Prot
Match: sp|Q38825|IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 120/229 (52.40%), Postives = 154/229 (67.25%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPGG-DAVK---------KRGFTQTLDLKLNLAADSDQRPKTTDT 60
           +G L++ + TEL LGLPGG +AV+         KRGF++T+DL LNL ++ +      + 
Sbjct: 2   IGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNV 61

Query: 61  NAVSTSVGT-DLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCAD---- 120
           +AV     T   P  PP KAQVVGWPPV++ R+N++  +                     
Sbjct: 62  SAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQXXXXXXXXXXXXXXXXXXXXX 121

Query: 121 -AAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKS 180
             A  +KVSMDGAPYLRKVD+KMY SYQ+LSDAL+KMF+SFT GN G Q M ++ NESK 
Sbjct: 122 AGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKL 181

Query: 181 MDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           M++ N +EYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +A+GL
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

[Close]

BLAST of Carg16478 vs. TrEMBL
Match: tr|A0A0A0M3H6|A0A0A0M3H6_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G690240 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.2e-85
Identity = 167/224 (74.55%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGSL+ FE+TELRLGLPG      GDAVKKRGFT+T+DLKLN+  DS+Q  KTTD N VS
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAP--KTSTEETEKGATVSG---CADAAAF 120
           + V  DLPKPPP KAQVVGWPPVKSLRRNIV P  K   EETEK A +SG      AAAF
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVGAAAF 120

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRN 180
           IKVSMDGAPYLRKVD+KMYGSYQELSDAL KMFASFT G CG QKM++Y NE K +DV N
Sbjct: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVSN 180

Query: 181 ETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
            ++YVPTYEDKDGDWMLVGDVPW+MFVDSCKRLRIMKG +AIGL
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 224

[Close]

BLAST of Carg16478 vs. TrEMBL
Match: tr|A0A1S3CHI2|A0A1S3CHI2_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501008 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.1e-81
Identity = 158/220 (71.82%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGSL+DF++TELRLGLPG      GDAVKKRGFT+T+DLKL++A DSDQ  KT D N VS
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAP-KTSTEETEKGATVSGCADAAAFIKVS 120
           + V  DLPKPPP K QV+GWPPVKSLRRNI+ P K   EET+K A       A AFIKVS
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAVGDCSVGAVAFIKVS 120

Query: 121 MDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEY 180
           M+GAPYLRKVD+KMY SYQ+L DALSKMF SFTTGNCG QKMK+Y NE K  DV N ++Y
Sbjct: 121 MEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLNGSDY 180

Query: 181 VPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           VPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKG +AIGL
Sbjct: 181 VPTYEDKDGDWMLVGDVPWDMFVNSCKRLRIMKGSEAIGL 220

[Close]

BLAST of Carg16478 vs. TrEMBL
Match: tr|A0A1S3CI31|A0A1S3CI31_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501008 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.5e-71
Identity = 141/200 (70.50%), Postives = 159/200 (79.50%), Query Frame = 0


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVS 60
           MGSL+DF++TELRLGLPG      GDAVKKRGFT+T+DLKL++A DSDQ  KT D N VS
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  TSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAP-KTSTEETEKGATVSGCADAAAFIKVS 120
           + V  DLPKPPP K QV+GWPPVKSLRRNI+ P K   EET+K A       A AFIKVS
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAVGDCSVGAVAFIKVS 120

Query: 121 MDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETEY 180
           M+GAPYLRKVD+KMY SYQ+L DALSKMF SFTTGNCG QKMK+Y NE K  DV N ++Y
Sbjct: 121 MEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLNGSDY 180

Query: 181 VPTYEDKDGDWMLVGDVPWN 194
           VPTYEDKDGDWMLVGDVPW+
Sbjct: 181 VPTYEDKDGDWMLVGDVPWD 200

[Close]

BLAST of Carg16478 vs. TrEMBL
Match: tr|A0A2N9FZI3|A0A2N9FZI3_FAGSY (Auxin-responsive protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20203 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.0e-65
Identity = 136/221 (61.54%), Postives = 171/221 (77.38%), Query Frame = 0


Query: 3   SLIDFEQTELRLGLPG-----GDAVK---KRGFTQTLDLKLNLAA-DSDQRPKTTDTNAV 62
           ++I+FE+TELRLGLPG     G+A K   KRGF++T+DLKLNL++ +S +  +       
Sbjct: 13  NMINFEETELRLGLPGGSGNDGEAAKNSGKRGFSETVDLKLNLSSKESGKNIEVEKMKEK 72

Query: 63  STSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVA-PKTSTEETEKGATVSGCADAAAFIKV 122
           S +  ++ P  PP KAQVVGWPPV+S R+NIV+  K + +E EK ++      +AAF+KV
Sbjct: 73  SVAPRSNDPAKPPAKAQVVGWPPVRSFRKNIVSVQKNNNDEAEKASS------SAAFVKV 132

Query: 123 SMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKSMDVRNETE 182
           SMDGAPYLRKVD+K+Y SYQELSDAL KMF+SFT GNCG+Q MK++ NESK +D+ N +E
Sbjct: 133 SMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSE 192

Query: 183 YVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKG +AIGL
Sbjct: 193 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 227

[Close]

BLAST of Carg16478 vs. TrEMBL
Match: tr|B9SZ69|B9SZ69_RICCO (Auxin-responsive protein OS=Ricinus communis OX=3988 GN=RCOM_0484470 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.9e-65
Identity = 141/233 (60.52%), Postives = 167/233 (71.67%), Query Frame = 0


Query: 4   LIDFEQTELRLGLPGGDAVK---------KRGFTQTLDLKLNLAA------DSDQRPKTT 63
           +I+FE+TELRLGLPGG  V          KRGF++T+DLKLNL+       D     +T 
Sbjct: 14  MINFEETELRLGLPGGSNVNDSEFAKVNGKRGFSETVDLKLNLSTKEPSGKDVIVGEETM 73

Query: 64  DTNAVSTSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVA-PKTSTEETEKGATVSGCADA- 123
              A   S   D P  PP KAQVVGWPP++S R+N++A  K ST+E EKG   S  A A 
Sbjct: 74  KEKATVPSSSND-PAKPPAKAQVVGWPPIRSFRKNVMAVQKNSTDEGEKGTATSAPAAAA 133

Query: 124 ------AAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYAN 183
                 AAF+KVSMDGAPYLRKVD+K+Y SYQELSDAL KMF+SFT GNCG+Q MK++ N
Sbjct: 134 TSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMN 193

Query: 184 ESKSMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGL 214
           ESK +D+ N +EYVPTYEDKDGDWMLVGDVPW MFV+SCKRLRIMKG +AIGL
Sbjct: 194 ESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVNSCKRLRIMKGSEAIGL 245

The following BLAST results are available for this feature:

BLAST of Carg16478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925407.1	5.8e-112	96.71	auxin-responsive protein IAA16-like [Cucurbita moschata]	[more]
XP_023531478.1	1.7e-111	96.71	auxin-responsive protein IAA16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965557.1	4.3e-107	92.96	auxin-responsive protein IAA16-like [Cucurbita maxima]	[more]
XP_004142529.1	7.9e-85	74.55	PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus] >KGN66786.1 hypothet...	[more]
XP_022155103.1	7.9e-85	76.02	auxin-responsive protein IAA16-like [Momordica charantia]	[more]

BLAST of Carg16478 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04730.1	4.3e-61	55.65	indoleacetic acid-induced protein 16	[more]
AT4G14550.1	2.2e-60	55.25	indole-3-acetic acid inducible 14	[more]
AT1G04250.1	3.8e-57	54.67	AUX/IAA transcriptional regulator family protein	[more]
AT3G23050.1	8.5e-57	52.40	indole-3-acetic acid 7	[more]
AT4G29080.1	1.0e-41	40.61	phytochrome-associated protein 2	[more]

BLAST of Carg16478 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24407\|IAA16_ARATH	7.8e-60	55.65	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
sp\|Q38832\|IAA14_ARATH	3.9e-59	55.25	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
sp\|P13089\|AUX28_SOYBN	1.1e-58	55.36	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]
sp\|P93830\|IAA17_ARATH	6.9e-56	54.67	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]
sp\|Q38825\|IAA7_ARATH	1.5e-55	52.40	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]

BLAST of Carg16478 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M3H6\|A0A0A0M3H6_CUCSA	5.2e-85	74.55	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G690240 PE=3 SV=1	[more]
tr\|A0A1S3CHI2\|A0A1S3CHI2_CUCME	2.1e-81	71.82	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501008 PE=3 SV=1	[more]
tr\|A0A1S3CI31\|A0A1S3CI31_CUCME	2.5e-71	70.50	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501008 PE=3 SV=1	[more]
tr\|A0A2N9FZI3\|A0A2N9FZI3_FAGSY	6.0e-65	61.54	Auxin-responsive protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20203 PE=3 SV=1	[more]
tr\|B9SZ69\|B9SZ69_RICCO	7.9e-65	60.52	Auxin-responsive protein OS=Ricinus communis OX=3988 GN=RCOM_0484470 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16478-RA	Carg16478-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 22..213 e-value: 2.1E-72 score: 243.8
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 102..219 e-value: 1.7E-41 score: 142.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..70
None	No IPR available	PANTHER	PTHR31734:SF28	AUXIN-RESPONSIVE PROTEIN IAA16-RELATED	coord: 3..214
None	No IPR available	SUPERFAMILY	SSF54277	CAD & PB1 domains	coord: 104..206
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 3..214
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 107..207 score: 23.573

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16478	Csa1G690240	Cucumber (Chinese Long) v2	carcuB0927
Carg16478	MELO3C024660	Melon (DHL92) v3.5.1	carmeB0896
Carg16478	ClCG06G009320	Watermelon (Charleston Gray)	carwcgB0893
Carg16478	CSPI01G33550	Wild cucumber (PI 183967)	carcpiB0948
Carg16478	Cucsa.291640	Cucumber (Gy14) v1	carcgyB1031
Carg16478	CmaCh11G009790	Cucurbita maxima (Rimu)	carcmaB1252
Carg16478	CmoCh11G009990	Cucurbita moschata (Rifu)	carcmoB1222
Carg16478	Lsi06G007910	Bottle gourd (USVL1VR-Ls)	carlsiB830
Carg16478	CsGy1G032200	Cucumber (Gy14) v2	carcgybB0899
Carg16478	MELO3C024660.2	Melon (DHL92) v3.6.1	carmedB0904
Carg16478	CsaV3_1G045520	Cucumber (Chinese Long) v3	carcucB0949
Carg16478	Cla97C06G119080	Watermelon (97103) v2	carwmbB0958
Carg16478	Bhi06G001522	Wax gourd	carwgoB1056
Carg16478	Bhi02G001033	Wax gourd	carwgoB1057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16478	Cucurbita maxima (Rimu)	carcmaB1251
Carg16478	Cucurbita moschata (Rifu)	carcmoB1221
Carg16478	Cucurbita pepo (Zucchini)	carcpeB1261
Carg16478	Cucurbita pepo (Zucchini)	carcpeB1262