Carg16450 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16450
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mechanosensitive ion channel protein
Location	Cucurbita_argyrosperma_scaffold_130 : 622722 .. 627911 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCACCCAGTTGATACCTGACTCGTTCTCCACGCCATACCTTAGTCTTCTGCACGGCGTCTCCTCCGCCGTTTCGCCAGCTCAGTGTCGCCGCCGCTTCTCTCCTCTTCAATGCCGCCGCCGCCGCCGTGATCTTTTTTTCGTTCGTGCCGCTGCAGTCTTCCTCGATCTTCTACACTCTTGTTGTTATTGGTATTCTTCGAATCTCTATCTATTCGACCAATTTCTACTCTCCTGTTTGATTTTTTTTTTTCTTTTTAATTCCTAGCTTGATTGATTGACTGAACAATTTCAACCTTATTTATATCCATTTGTTTAATTACATTAATTTTCTGAATCTGTTTGTTCCAAAATGATAAACAAAAAACGGTGAAAGATACTCGTAAAGAACGTTCGAAAATTCGGGGGTGGTTGGAAAAAGCAGAATCGAGAGACTAAGACGTGGGAAAAGTAAAAGGAGAGTTGCAATAGTGAAAGGAAAGTATAGATATAGAGAGGAAGTCCCGAAGGATGGAGACGGGGGAAGGATCTGAATCAAGTTGAATAGGTTATTAGAACTAATTGTTGCTTCATTCAGATTTCTCTATAACAGGTTAGTGATTTTGAACTTTCTGCAGACGTATGTTCTAGTTGCAAGATTATAGTGGAGAAGATTTCGTTTCAATTTAACAGTTACTTGTGTTTGATTGTTGTTTTACTGGCAGTGTAGCAAGGATAGGAGATGTGATTTGAGTCATTTGATTCGGTTTTTTTATGTTTTTTCTCATTTTTCTTCCATTTATTTGCTTCCAGATTATGGTTTTGGGTACATGGATGTAATTGTAGCCAGTGATTATGCTGGTTGTGTTTCTATTATGTGTCTCGCTGTGAATTCTTTGTGATGTTGAATCAATTTGTTCTTGGATTTCCATAGCTGAATATTTTTTCTTGCAGTTTTGGAACTCAATTGATAAATCTTGAGTTCAGTTTGGTTCTTACGGAATTTACTGGACGTGTGCTGAATTGTATCACTGGTTGGCATGAGGCTTTTCATTCTCAATTCGATTTATAGTGCCTCCAAATCTTATTTGAATCCGTGCTCATTTCAATATTGCAAGTCTTACACAAAGATTTCTGAGTATGTTAACCAAGTTCTTAGACCGAGTGTTGTTCTAAATAAACAATACTACAAAGATGAATCTCACAGCTTGAAGAACGTCTCACGTACTGGTTTCCTAGGAGCACCCTCTGTATGTTGTCTACACACACCAAGTTATGGTACACATCCCGCTGCTACTTTTTCCCCCGCATCACCAGTGAAATATTGGAACACTATCCCTCCTACGTCTCTTGGCTATCTGTCAAACCCTCGATTCTATTCATCAACTTCTAGCAGGAAGGCGGATATTACTGGAGATACTGGTGTTCCACTTGCTTCTTCTGGTGTTGAAGCAGATATCAGTAACCCCCCCGATGTTGGAAGAGACTGGCTTGAAAGAGTCAAGGATGGCTGGCAGAGTGTTGTCGATGCAGCATCTTTTACCGGACAGAAGGCTAGAGAAGTGTCTGATGAATTCTCTCCTCATGTAGATAAGCTCTTAGATTCACATCCATATCTGAAAAATGAAATTGCTCCTGTTGGTATGACCTTAACTGCTACTCTTTTGGCTTGGGTGGTAATGCCTAGGCTTTTGAGGAGATTCCACAAGTATTCAATGCGAAGTCCTGTTGCCATACTTTCTGGAAGCACATCTATTGAGGAAATTCCCTATGAGAAAAGCTTTTGGGGTGCCTTAGAGGATCCTTTGAGATATCTTGTTACCTTCTATGCATTTTCTCAAATGTTAGTGACTCAAACTTCAACATATTTCTCTTTAATTACACAATGGTTTGTTGACTGTGTGCTTGATCTTTGCTTGAAACATTTGTCTAAACTTTGATTTGCAGTGGCAAGATGGTTGCACCAACTGCCATAGCATCAGAATTTGTATCACAGGCGTGCAGGGGGGCTGTCATCCTTTCTCTTGTATGGTTTATTTATCGCTGGAAAACAAATGTGTTCTCTCGAGCATTGGCCTCCCAAAATTTTTCAGGGCTTGATCGGGAAAAGTTACTTACCCTCGACAAAGTTTCATCTGTTGGCCTATTTGCAATCGGATTAATGGCTTTGGCTGAGGCATCTGGGGTGGCTGTTCAATCTATGTTGACAGTTGGTGGCATTGGAGGTGAGATCTTGCTGCCAAATGGCTTTGCAGTTTTACTTTCGTTTGACTGATTCCTACTTTGCTGTCATGTGTCCTCCACTTGATTGGTTTATTGTTAGGGCCGAAGGTTTAACATTGTTCATCATTCTTTTTTCAAATTAAAATAAAAAAAGAGAGAAAACTCTTCTCTTGATTATTGAACCTTACCAATGTAGCTCTTTTTGTATTGTTGTGGAGTAGAGTTATGCTCAAGATAACAATCATGTTCTTCGTAATGATATGCTTCGATTTTTAGAGCAGTAATCAGGCTTGCATATTTTTAATAACTCGAAATATGTATAGCATGATTTAAATCTCCTATTTCTTTGCAGGAGTGGCCACTGCTTTTGCTGCGAGGGATATACTTGGAAATGTTTTAAGTGGCTTAACAATGCAGTTTTCACAACCCTTCTCACTTGGAGATACAATTAAGGTGTGTAAATCATACTTTTTTCTCTTTTATCTTTGGGCAAGGAACCAAGTTGTATCTAGCATTGCTGGGGCACATATGATCCACAAAAGTTGGAAGATTTGAAGTGGGACTTCATTTTTCTTTTTTTCCTTTGACTACTATCATTCTTATTCTCCTAATAAAAACGTCACTGAAGTTGATACGTCAATGATGCTTGGTCTTTTAGATGACATTCATCTTTGTATACTATCAAATCCATGTGTACTTTTCAGTCATTAACCTCTCTTTGCATTTACTGGGAGATGATGGCATTGAACAAATTGCTGGAAACTTATAGATTGTTTCTGCAAGTTTGTTCTATTTGTTCTTTCTCATCAACTTCAAAAACGAACGATTTGCAATTTTCCATTTGCAGGCTGGTGCTATTGAAGGCCAAGTGATTGAAATGGGCCTCATGACGACATCATTATTAAGTGCTGAAAAATTCCCAATCGTTGTTCCAAATTCTCTCTTTTCTAGCCAGGTGAATCTTCTTTTTTTTCTTTTTTGCTTTTTTGTGCTTGGATTTTTTTATTTATTTACTATATTATCATTATCTTCATGGTCGTTTTATTTTTGTTCCTGAACTCAACGCTTCCCTTATTTAAATTGTTTACTAAAAGTCGAGGCATATTTGACTATTAGTTTCCATAGCCGAACGATGCATATGTTGCCAATAACTTGATTAAGTACATTTGTTGTCATGAAGATGTGTTGCCAATAATATGATTAAATACATTTGTTATCATGGAGATTTAAGTGATATTGGCTTTCTATTTGAAATTAGTGTAGAAGATAGAGTAAATTTGTTGTCCTCTCGATGCCTTTCCTCATGAAGAGCATGTGAATACGTCCAACTTCATTTTTCTGGTAGTCTCGCAAGTAGATTTCTAAATTAAGTTAATTATCCATTTTGATATCTTTATAAATTTTATTAAAAAAATATACCATTTTTAGCTCCCGTATGGAGAAAAATCGACCAATATTCAACTTTTCGGACTTGGAGATGGTCAATAGTCACGACACGAATGGCGATTGTTCTTATCTTTCACTCGGCAAACTTTCCTGTAATGCTAGATCATTTAATCTATGTTTGGTTCTTTAATTCATGCAGGGATATGTTTGGCATATGATTTGTGGTGTTTTAATGATTTCGCATGAATCTCTTAGTTGATTATGTAATGAAGGTATTTGTTCATTTGGTCCCACATTTTTCAACCCGTTTCTTGAATTTATGCTGAGGATTGCGATGGATTTCTTGGATTAAGATGGTGATTTTGATCAATTTTACTGCGTGGTTAAATGGGATTATAATATTTACAGGTAATTATAAATAAGTCGCGGGCGCAATGGCGTGCAATCACAAAGAAAATTCCTTTCCAAGTTGCTGATCTTAGTACGGTTTCTAAGATATCAGATGATATTAAGAGTATGCTTAAGTCTCACCCTAAGGTATTCTTGGGCAAGGAGGCTCCTTATTGCTTCCTCTCTCAAATTGAAAGTTCGTATGCAGAGCTGACAATTGGTTGCAACCTTAAAAGGATGGTGAGTCAGTCTAATATTTTGAGTGTCATATGCTAGGAATCAATACTCTCTACGATTGTATGATATTGTCCATTTTGAGCAAGCTCTCGTGGCTTTTCTTTGGGCTTCCCCAAAATCCCTCGTATCAATGGATATGTATTCCTTACTTATAAATCCATGATCATTCTCTTAATTAACCAACGTGGGACTCCCTCCCAACCATCCTCAACAATCCCCCTCTCGAACAAAGTATACCATAGAGCCTCCCCTAAGGCCTATGGAGCCCTTGCACAACCTCCCCTTAATTGAGGCTCAACTCCTTTCTCTGGAGTCCTCGAACAAAGTATACCTTTTGTTCGACACTTGAGTCACTTTGACTACACTCTCGTGGGTCTCAACTTCTTTGTTCGACATTTGAGGATTCTTTTGACATGGCGAAGTTAAGGGCATGGCTCTGATACCATGTTAGAAATCGTAGATCTCCACAATGGTATGATGATAATGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCATACCAATGGTGATGTATTCCTTACTTATAAACCCATGATCTTTCCTTTAATTAACTAACGTGGGTCTCCCTCCCAACAATCCTCAACATCATATCCTCCTCGAACTCCTCGACTTGTTGTCCCTTCAAACGTTAGAGTTTCATACTTCAAAATTGTATTTATGTAGGGTAAAGAAGAACTTTTCTCAACAGAGCAAGATATTCTCCTCCAGTCAGTACAGATCATGAAGGAAAATGGTGCAACCTTGGGTAACTGACGAACAAGATACCAAACGTACTTTCAGGTAAGTCTCGTACTAATGGAGATTGATCTTAAGCTATTCCCATGCCACGATGTGACTGGACAGCCATAAATTTTCAAGGATGTTTTTTTCGAGGGATATTATTGAAATTAGTACACAATTTAAGGGTGTTTCTACAATTTTCTCGAAGTTATTTTGCCTTACTATTATATATA

mRNA sequence

ATTCACCCAGTTGATACCTGACTCGTTCTCCACGCCATACCTTAGTCTTCTGCACGGCGTCTCCTCCGCCGTTTCGCCAGCTCAGTGTCGCCGCCGCTTCTCTCCTCTTCAATGCCGCCGCCGCCGCCGTGATCTTTTTTTCGTTCGTGCCGCTGCAGTCTTCCTCGATCTTCTACACTCTTGTTGTTATTGTTTTGGAACTCAATTGATAAATCTTGAGTTCAGTTTGGTTCTTACGGAATTTACTGGACGTGTGCTGAATTGTATCACTGGTTGGCATGAGGCTTTTCATTCTCAATTCGATTTATAGTGCCTCCAAATCTTATTTGAATCCGTGCTCATTTCAATATTGCAAGTCTTACACAAAGATTTCTGAGTATGTTAACCAAGTTCTTAGACCGAGTGTTGTTCTAAATAAACAATACTACAAAGATGAATCTCACAGCTTGAAGAACGTCTCACGTACTGGTTTCCTAGGAGCACCCTCTGTATGTTGTCTACACACACCAAGTTATGGTACACATCCCGCTGCTACTTTTTCCCCCGCATCACCAGTGAAATATTGGAACACTATCCCTCCTACGTCTCTTGGCTATCTGTCAAACCCTCGATTCTATTCATCAACTTCTAGCAGGAAGGCGGATATTACTGGAGATACTGGTGTTCCACTTGCTTCTTCTGGTGTTGAAGCAGATATCAGTAACCCCCCCGATGTTGGAAGAGACTGGCTTGAAAGAGTCAAGGATGGCTGGCAGAGTGTTGTCGATGCAGCATCTTTTACCGGACAGAAGGCTAGAGAAGTGTCTGATGAATTCTCTCCTCATGTAGATAAGCTCTTAGATTCACATCCATATCTGAAAAATGAAATTGCTCCTGTTGGTATGACCTTAACTGCTACTCTTTTGGCTTGGGTGGTAATGCCTAGGCTTTTGAGGAGATTCCACAAGTATTCAATGCGAAGTCCTGTTGCCATACTTTCTGGAAGCACATCTATTGAGGAAATTCCCTATGAGAAAAGCTTTTGGGGTGCCTTAGAGGATCCTTTGAGATATCTTGTTACCTTCTATGCATTTTCTCAAATTGGCAAGATGGTTGCACCAACTGCCATAGCATCAGAATTTGTATCACAGGCGTGCAGGGGGGCTGTCATCCTTTCTCTTGTATGGTTTATTTATCGCTGGAAAACAAATGTGTTCTCTCGAGCATTGGCCTCCCAAAATTTTTCAGGGCTTGATCGGGAAAAGTTACTTACCCTCGACAAAGTTTCATCTGTTGGCCTATTTGCAATCGGATTAATGGCTTTGGCTGAGGCATCTGGGGTGGCTGTTCAATCTATGTTGACAGTTGGTGGCATTGGAGGAGTGGCCACTGCTTTTGCTGCGAGGGATATACTTGGAAATGTTTTAAGTGGCTTAACAATGCAGTTTTCACAACCCTTCTCACTTGGAGATACAATTAAGGCTGGTGCTATTGAAGGCCAAGTGATTGAAATGGGCCTCATGACGACATCATTATTAAGTGCTGAAAAATTCCCAATCGTTGTTCCAAATTCTCTCTTTTCTAGCCAGGTAATTATAAATAAGTCGCGGGCGCAATGGCGTGCAATCACAAAGAAAATTCCTTTCCAAGTTGCTGATCTTAGTACGGTTTCTAAGATATCAGATGATATTAAGAGTATGCTTAAGTCTCACCCTAAGGTATTCTTGGGCAAGGAGGCTCCTTATTGCTTCCTCTCTCAAATTGAAAGTTCGTATGCAGAGCTGACAATTGGTTGCAACCTTAAAAGGATGGGTAAAGAAGAACTTTTCTCAACAGAGCAAGATATTCTCCTCCAGTCAGTACAGATCATGAAGGAAAATGGTGCAACCTTGGGTAACTGACGAACAAGATACCAAACGTACTTTCAGGTAAGTCTCGTACTAATGGAGATTGATCTTAAGCTATTCCCATGCCACGATGTGACTGGACAGCCATAAATTTTCAAGGATGTTTTTTTCGAGGGATATTATTGAAATTAGTACACAATTTAAGGGTGTTTCTACAATTTTCTCGAAGTTATTTTGCCTTACTATTATATATA

Coding sequence (CDS)

ATGAGGCTTTTCATTCTCAATTCGATTTATAGTGCCTCCAAATCTTATTTGAATCCGTGCTCATTTCAATATTGCAAGTCTTACACAAAGATTTCTGAGTATGTTAACCAAGTTCTTAGACCGAGTGTTGTTCTAAATAAACAATACTACAAAGATGAATCTCACAGCTTGAAGAACGTCTCACGTACTGGTTTCCTAGGAGCACCCTCTGTATGTTGTCTACACACACCAAGTTATGGTACACATCCCGCTGCTACTTTTTCCCCCGCATCACCAGTGAAATATTGGAACACTATCCCTCCTACGTCTCTTGGCTATCTGTCAAACCCTCGATTCTATTCATCAACTTCTAGCAGGAAGGCGGATATTACTGGAGATACTGGTGTTCCACTTGCTTCTTCTGGTGTTGAAGCAGATATCAGTAACCCCCCCGATGTTGGAAGAGACTGGCTTGAAAGAGTCAAGGATGGCTGGCAGAGTGTTGTCGATGCAGCATCTTTTACCGGACAGAAGGCTAGAGAAGTGTCTGATGAATTCTCTCCTCATGTAGATAAGCTCTTAGATTCACATCCATATCTGAAAAATGAAATTGCTCCTGTTGGTATGACCTTAACTGCTACTCTTTTGGCTTGGGTGGTAATGCCTAGGCTTTTGAGGAGATTCCACAAGTATTCAATGCGAAGTCCTGTTGCCATACTTTCTGGAAGCACATCTATTGAGGAAATTCCCTATGAGAAAAGCTTTTGGGGTGCCTTAGAGGATCCTTTGAGATATCTTGTTACCTTCTATGCATTTTCTCAAATTGGCAAGATGGTTGCACCAACTGCCATAGCATCAGAATTTGTATCACAGGCGTGCAGGGGGGCTGTCATCCTTTCTCTTGTATGGTTTATTTATCGCTGGAAAACAAATGTGTTCTCTCGAGCATTGGCCTCCCAAAATTTTTCAGGGCTTGATCGGGAAAAGTTACTTACCCTCGACAAAGTTTCATCTGTTGGCCTATTTGCAATCGGATTAATGGCTTTGGCTGAGGCATCTGGGGTGGCTGTTCAATCTATGTTGACAGTTGGTGGCATTGGAGGAGTGGCCACTGCTTTTGCTGCGAGGGATATACTTGGAAATGTTTTAAGTGGCTTAACAATGCAGTTTTCACAACCCTTCTCACTTGGAGATACAATTAAGGCTGGTGCTATTGAAGGCCAAGTGATTGAAATGGGCCTCATGACGACATCATTATTAAGTGCTGAAAAATTCCCAATCGTTGTTCCAAATTCTCTCTTTTCTAGCCAGGTAATTATAAATAAGTCGCGGGCGCAATGGCGTGCAATCACAAAGAAAATTCCTTTCCAAGTTGCTGATCTTAGTACGGTTTCTAAGATATCAGATGATATTAAGAGTATGCTTAAGTCTCACCCTAAGGTATTCTTGGGCAAGGAGGCTCCTTATTGCTTCCTCTCTCAAATTGAAAGTTCGTATGCAGAGCTGACAATTGGTTGCAACCTTAAAAGGATGGGTAAAGAAGAACTTTTCTCAACAGAGCAAGATATTCTCCTCCAGTCAGTACAGATCATGAAGGAAAATGGTGCAACCTTGGGTAACTGA

Protein sequence

MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNVSRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN

Homology

[Close]

BLAST of Carg16450 vs. NCBI nr
Match: XP_022937845.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1033.1 bits (2670), Expect = 3.3e-298
Identity = 528/533 (99.06%), Postives = 531/533 (99.62%), Query Frame = 0


Query: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNV 60
           MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVN+VLR SVVLNKQYYKDESHSLKNV
Sbjct: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNRVLRLSVVLNKQYYKDESHSLKNV 60

Query: 61  SRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120
           SRTGFL APSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK
Sbjct: 61  SRTGFLRAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120

Query: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFS 180
           ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFS
Sbjct: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFS 180

Query: 181 PHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240
           PHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE
Sbjct: 181 PHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240

Query: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300
           EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR
Sbjct: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300

Query: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360
           WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG
Sbjct: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360

Query: 361 GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI 420
           GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQV+EMGLMTTSLLSAEKFPI
Sbjct: 361 GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKFPI 420

Query: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEA 480
           VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSML+SHPKVFLGKEA
Sbjct: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLRSHPKVFLGKEA 480

Query: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN
Sbjct: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 533

[Close]

BLAST of Carg16450 vs. NCBI nr
Match: XP_023538305.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1028.9 bits (2659), Expect = 6.3e-297
Identity = 526/533 (98.69%), Postives = 529/533 (99.25%), Query Frame = 0


Query: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNV 60
           MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVN+VLRPSVVLNKQYYKDESHSLKNV
Sbjct: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNRVLRPSVVLNKQYYKDESHSLKNV 60

Query: 61  SRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120
           SRTGFL APSVC LHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK
Sbjct: 61  SRTGFLRAPSVCRLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120

Query: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFS 180
           ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQS VDAASFTGQKAREVSDEFS
Sbjct: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSAVDAASFTGQKAREVSDEFS 180

Query: 181 PHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240
           PHVDK+LDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE
Sbjct: 181 PHVDKILDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240

Query: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300
           EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR
Sbjct: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300

Query: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360
           WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG
Sbjct: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360

Query: 361 GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI 420
           GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI
Sbjct: 361 GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI 420

Query: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEA 480
           VVPNSLFSSQVIINKSRAQWRAITKKIPFQVAD STVSKISDDIKSML+SHPKVFLGKEA
Sbjct: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADFSTVSKISDDIKSMLRSHPKVFLGKEA 480

Query: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN
Sbjct: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 533

[Close]

BLAST of Carg16450 vs. NCBI nr
Match: XP_022969688.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1021.1 bits (2639), Expect = 1.3e-294
Identity = 521/533 (97.75%), Postives = 527/533 (98.87%), Query Frame = 0


Query: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNV 60
           MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVN+VLRPSVVLNKQYYKDESHSLKNV
Sbjct: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNRVLRPSVVLNKQYYKDESHSLKNV 60

Query: 61  SRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120
           SRTGF+ APSVC LHTPSYGTHP ATFSPASPVKYWNTIPPTSL YLSNPRFYSSTSSRK
Sbjct: 61  SRTGFIRAPSVCRLHTPSYGTHPIATFSPASPVKYWNTIPPTSLAYLSNPRFYSSTSSRK 120

Query: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFS 180
           ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQS VDAASFTGQKAREVSDEFS
Sbjct: 121 ADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSAVDAASFTGQKAREVSDEFS 180

Query: 181 PHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240
           PHVDK+LDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE
Sbjct: 181 PHVDKILDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIE 240

Query: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300
           EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR
Sbjct: 241 EIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYR 300

Query: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360
           WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG
Sbjct: 301 WKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIG 360

Query: 361 GVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI 420
           GVATAFA+RDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI
Sbjct: 361 GVATAFASRDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPI 420

Query: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEA 480
           VVPNSLFSSQVIINKSRAQWRAITKKIPFQVAD STVSKISDDIKSML+SHPKVFLGKEA
Sbjct: 421 VVPNSLFSSQVIINKSRAQWRAITKKIPFQVADFSTVSKISDDIKSMLRSHPKVFLGKEA 480

Query: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQI+KENGATLGN
Sbjct: 481 PYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIIKENGATLGN 533

[Close]

BLAST of Carg16450 vs. NCBI nr
Match: XP_022147379.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia] >XP_022147381.1 mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia] >XP_022147382.1 mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia])

HSP 1 Score: 848.6 bits (2191), Expect = 1.2e-242
Identity = 439/535 (82.06%), Postives = 480/535 (89.72%), Query Frame = 0


Query: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNV 60
           +R+FIL SIY++S+SYLNP S Q  K YTKISEYV++ LRPS VLNK+ + D S   KN 
Sbjct: 4   IRIFILKSIYTSSRSYLNPYSSQSYKPYTKISEYVDRGLRPSTVLNKKCHNDNSRRTKNT 63

Query: 61  SRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRK 120
           S TGF  A SVC L+  S+G +P  TF PA  V+YW T+P TS G+LSNPR YSS SSRK
Sbjct: 64  SGTGFPRAASVCGLNISSHGAYPIDTFLPAWSVRYWRTVPLTSPGHLSNPRLYSSASSRK 123

Query: 121 ADITGDTGVPLASSGVEADISNPPDV--GRDWLERVKDGWQSVVDAASFTGQKAREVSDE 180
           ADITGDTGV  AS+GVEADISN  DV  G++WLERVKD WQS VDAASFT QKA+EVSDE
Sbjct: 124 ADITGDTGVSAASAGVEADISNTQDVGTGKEWLERVKDVWQSAVDAASFTEQKAKEVSDE 183

Query: 181 FSPHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTS 240
           F+PHVDKL DSHPYLKN I PV MTLTATLLAW+VMPRLLRRFHKYSMR PVA+LSGS S
Sbjct: 184 FTPHVDKLFDSHPYLKNVIVPVSMTLTATLLAWLVMPRLLRRFHKYSMRGPVALLSGSIS 243

Query: 241 IEEIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFI 300
           +EEIPYEKSFWGALEDPLRYLVTF+AFSQIG MVAPT +ASE+V+QACRGAVILSLVWFI
Sbjct: 244 VEEIPYEKSFWGALEDPLRYLVTFFAFSQIGMMVAPTTVASEYVTQACRGAVILSLVWFI 303

Query: 301 YRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGG 360
           YRWKTNV SRALASQ+FSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGG
Sbjct: 304 YRWKTNVLSRALASQSFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGG 363

Query: 361 IGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKF 420
           IGGVA AFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQV+EMGLMTTSLLSAEKF
Sbjct: 364 IGGVAAAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKF 423

Query: 421 PIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGK 480
           PIVVPNSLFSSQVI+NKSRAQWRAITKKIP QV +LSTVS+ISD+IKSML+SHPKVFLGK
Sbjct: 424 PIVVPNSLFSSQVIVNKSRAQWRAITKKIPLQVDNLSTVSQISDNIKSMLRSHPKVFLGK 483

Query: 481 EAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           EAPYCFLSQIES+YAELTIGCNL++M K+ELFSTEQDILLQSVQI+KE+GATLG+
Sbjct: 484 EAPYCFLSQIESTYAELTIGCNLRKMSKDELFSTEQDILLQSVQIIKEHGATLGS 538

[Close]

BLAST of Carg16450 vs. NCBI nr
Match: XP_008438011.1 (PREDICTED: mechanosensitive ion channel protein 1, mitochondrial [Cucumis melo] >XP_008438013.1 PREDICTED: mechanosensitive ion channel protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 825.1 bits (2130), Expect = 1.4e-235
Identity = 422/514 (82.10%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 20  CSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNVSRTGFLGAPSVCCLHTPSY 79
           CSFQ  K YTKIS+YV++VLRP+VVLNK+YY DESHS K           +VC LH PSY
Sbjct: 9   CSFQSFKPYTKISKYVDRVLRPNVVLNKRYYNDESHSFKRA---------TVCGLHIPSY 68

Query: 80  GTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEAD 139
           GTH   TF PAS +KYWNTIP TS+G LSN R YSSTS RKADITGDTGVP AS+GVE D
Sbjct: 69  GTHRIDTFLPASSMKYWNTIPLTSIGNLSNYRNYSSTSGRKADITGDTGVPAASAGVEPD 128

Query: 140 ISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAP 199
           ISNPPDVGRD LE+VKD WQS VDAASFTGQKA+EVSDE SPHVDKLLDSHPYLKN I P
Sbjct: 129 ISNPPDVGRDLLEKVKDVWQSAVDAASFTGQKAKEVSDELSPHVDKLLDSHPYLKNVIVP 188

Query: 200 VGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYL 259
           V MTL  TLLAW VMPRLLRRFHKYSMRSPVAI+SG+   EEIPYEKSFWGALEDPLRYL
Sbjct: 189 VSMTLAGTLLAWAVMPRLLRRFHKYSMRSPVAIISGALPSEEIPYEKSFWGALEDPLRYL 248

Query: 260 VTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLD 319
           VTF+AFSQIG +VAPTA+A EFVSQACRGAVILSLVWFIYRWKTNVFSRALA+Q  +GLD
Sbjct: 249 VTFFAFSQIGVIVAPTAVAPEFVSQACRGAVILSLVWFIYRWKTNVFSRALATQTSAGLD 308

Query: 320 REKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGL 379
           R++LLTLDKVSSV LFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARD+LGN+LSGL
Sbjct: 309 RDRLLTLDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDVLGNILSGL 368

Query: 380 TMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQ 439
           TMQFSQPFSLGDTIKAG IEGQV+EMGLMTTSLLSAEKFP+VVPNSLFSSQVIINKSRAQ
Sbjct: 369 TMQFSQPFSLGDTIKAGTIEGQVVEMGLMTTSLLSAEKFPVVVPNSLFSSQVIINKSRAQ 428

Query: 440 WRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGC 499
           WRAI K++P QV D+STVS+I+DDIK ML SHPKVFLGKEAPYCFLSQIES+YAELT+GC
Sbjct: 429 WRAIVKRVPLQVDDISTVSQITDDIKKMLMSHPKVFLGKEAPYCFLSQIESTYAELTVGC 488

Query: 500 NLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           NLK+MGK+E FSTEQDILLQSVQI+K  GATLG+
Sbjct: 489 NLKKMGKDESFSTEQDILLQSVQIIKARGATLGS 513

[Close]

BLAST of Carg16450 vs. TAIR10
Match: AT4G00290.1 (Mechanosensitive ion channel protein)

HSP 1 Score: 545.0 bits (1403), Expect = 5.0e-155
Identity = 281/444 (63.29%), Postives = 355/444 (79.95%), Query Frame = 0


Query: 90  ASPVKYWNTIPPTS-LGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEADISNPPDVGR 149
           +S ++  N   P + LG+ S  R +SS    K+D  G     + +SGV            
Sbjct: 55  SSNIRLHNDAKPFNYLGHSSYARAFSS----KSDDFGS----IVASGV-TGXXXXXXXXX 114

Query: 150 DWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAPVGMTLTATL 209
           DW+E+ KD  Q+ VDA + T +K ++VSDE  PHV + LDS+PYLK+ I PV +T+T TL
Sbjct: 115 DWVEKAKDVLQTSVDAVTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTL 174

Query: 210 LAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYLVTFYAFSQI 269
            AWVVMPR+LRRFH Y+M+S   +L    S E++PYEKSFWGALEDP RYLVTF AF+QI
Sbjct: 175 FAWVVMPRILRRFHTYAMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQI 234

Query: 270 GKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDK 329
             MVAPT IA+++ S   +GAVILSLVWF+YRWKTNV +R L++++F GLDREK+LTLDK
Sbjct: 235 AAMVAPTTIAAQYFSPTVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDK 294

Query: 330 VSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFS 389
           VSSVGLFAIGLMA AEA GVAVQS+LTVGG+GGVATAFAARDILGNVLSGL+MQFS+PFS
Sbjct: 295 VSSVGLFAIGLMASAEACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFS 354

Query: 390 LGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIP 449
           +GDTIKAG++EGQVIEMGL TTSLL+AEKFP++VPNSLFSSQVI+NKSRAQWRAI  KIP
Sbjct: 355 MGDTIKAGSVEGQVIEMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASKIP 414

Query: 450 FQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEE 509
            Q+ DL  + +IS++IK ML+S+ KVFLGKEAP+C+LS++E S+AELTIGCNL RMGKEE
Sbjct: 415 LQIDDLDMIPQISNEIKEMLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGKEE 474

Query: 510 LFSTEQDILLQSVQIMKENGATLG 533
           L++T+Q++LL++V+I+K++G +LG
Sbjct: 475 LYNTQQEVLLEAVKIIKKHGVSLG 489

[Close]

BLAST of Carg16450 vs. TAIR10
Match: AT4G00234.1 (BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel protein (TAIR:AT4G00290.1))

HSP 1 Score: 279.3 bits (713), Expect = 5.1e-75
Identity = 145/252 (57.54%), Postives = 186/252 (73.81%), Query Frame = 0


Query: 106 YLSNPRFYSSTSSRKADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAA 165
           YLS+  +  + SS+  D        + +SGV     +    G DW+E+ KD  Q+ V+A 
Sbjct: 19  YLSHSSYARAFSSKSDDFGS-----IVASGV---TGSGDGNGNDWVEKAKDVVQTSVNAV 78

Query: 166 SFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYS 225
           + T +K ++VSDE  PHV + LDS+PYLK+ I PV +T+T TL AW+VMPR+LRRFH Y+
Sbjct: 79  AETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTVTGTLFAWIVMPRILRRFHTYA 138

Query: 226 MRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQA 285
           M+S   +L    S E+IPYEKSFWGALEDP RYLVTF AF+QI  MVAPT IA+++ S  
Sbjct: 139 MQSSAKLLPVGFSNEDIPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFSPT 198

Query: 286 CRGAVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEA 345
            +GAVILS+VWF+YRWKTNV +R L++++F GLDR+K+LTLDKVSSVGLFAIGLMA AEA
Sbjct: 199 VKGAVILSVVWFLYRWKTNVITRMLSAKSFGGLDRDKVLTLDKVSSVGLFAIGLMASAEA 258

Query: 346 SGVAVQSMLTVG 358
            GVAVQS+LTVG
Sbjct: 259 CGVAVQSILTVG 262

[Close]

BLAST of Carg16450 vs. TAIR10
Match: AT1G58200.1 (MSCS-like 3)

HSP 1 Score: 72.8 bits (177), Expect = 7.3e-13
Identity = 55/196 (28.06%), Postives = 97/196 (49.49%), Query Frame = 0


Query: 344 EASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTI--KAGAIE-- 403
           E  G + Q  LT GG+G V    A R+IL N LS + +  ++PF L + I  K G  E  
Sbjct: 257 ELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNEWIQTKIGGYEVS 316

Query: 404 GQVIEMGLMTTSLLSA-EKFPIVVPNSLFSSQVIIN-KSRAQWRAITKKIPFQVADLSTV 463
           G V ++G  + +++   ++  + +PN  FS  ++ N   +  WR I   +     D+S +
Sbjct: 317 GTVEQVGWWSPTIIRGDDREAVHIPNHQFSVNIVRNLTQKTHWR-IKTHLAISHLDVSKI 376

Query: 464 SKISDDIKSMLKSHPKVFLGKEAPYCFLSQI--ESSYAELTIGCNLKRMGKEELFSTEQD 523
           + I  D++ +L  +P++   K     FL  I  E+    + I C +K    EE    ++ 
Sbjct: 377 NNIVADMRKVLSKNPQIEQQKIHRRVFLEDIDPENQALRILISCFVKTSRFEEYLCVKEA 436

Query: 524 ILLQSVQIMKENGATL 532
           +LL  + +++ +GA L
Sbjct: 437 VLLDLLTVIRHHGARL 451

[Close]

BLAST of Carg16450 vs. TAIR10
Match: AT5G10490.1 (MSCS-like 2)

HSP 1 Score: 66.2 bits (160), Expect = 6.8e-11
Identity = 56/210 (26.67%), Postives = 100/210 (47.62%), Query Frame = 0


Query: 330 SSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSL 389
           S+V + A+ L    E  G + Q  LT GG+G V    A R+IL N LS + +  ++PF L
Sbjct: 243 SAVWVAAVSL--FMELLGFSTQKWLTAGGLGTVLITLAGREILTNFLSSVMIHATRPFVL 302

Query: 390 GD----TIKAGAIEGQVIEMGLMTTSLLSAE-KFPIVVPNSLFSSQVIIN-KSRAQWRAI 449
            +     I+   + G V  +G  + +++  E +  I +PN  F+  V+ N   +  WR I
Sbjct: 303 NEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLTQKTHWR-I 362

Query: 450 TKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQI--ESSYAELTIGCNL 509
              +     D++ ++ I  D++ +L  +P V   +     FL  +  E+    + I C +
Sbjct: 363 KTHLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRRVFLENVIPENQALSILISCFV 422

Query: 510 KRMGKEELFSTEQDILLQSVQIMKENGATL 532
           K    EE    ++ ILL  ++++  + A L
Sbjct: 423 KTSHHEEYLGVKEAILLDLLRVISHHRARL 449

[Close]

BLAST of Carg16450 vs. Swiss-Prot
Match: sp|Q8VZL4|MSL1_ARATH (Mechanosensitive ion channel protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MSL1 PE=2 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 9.0e-154
Identity = 281/444 (63.29%), Postives = 355/444 (79.95%), Query Frame = 0


Query: 90  ASPVKYWNTIPPTS-LGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEADISNPPDVGR 149
           +S ++  N   P + LG+ S  R +SS    K+D  G     + +SGV            
Sbjct: 55  SSNIRLHNDAKPFNYLGHSSYARAFSS----KSDDFGS----IVASGV-TGXXXXXXXXX 114

Query: 150 DWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAPVGMTLTATL 209
           DW+E+ KD  Q+ VDA + T +K ++VSDE  PHV + LDS+PYLK+ I PV +T+T TL
Sbjct: 115 DWVEKAKDVLQTSVDAVTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTL 174

Query: 210 LAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYLVTFYAFSQI 269
            AWVVMPR+LRRFH Y+M+S   +L    S E++PYEKSFWGALEDP RYLVTF AF+QI
Sbjct: 175 FAWVVMPRILRRFHTYAMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQI 234

Query: 270 GKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDK 329
             MVAPT IA+++ S   +GAVILSLVWF+YRWKTNV +R L++++F GLDREK+LTLDK
Sbjct: 235 AAMVAPTTIAAQYFSPTVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDK 294

Query: 330 VSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFS 389
           VSSVGLFAIGLMA AEA GVAVQS+LTVGG+GGVATAFAARDILGNVLSGL+MQFS+PFS
Sbjct: 295 VSSVGLFAIGLMASAEACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFS 354

Query: 390 LGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIP 449
           +GDTIKAG++EGQVIEMGL TTSLL+AEKFP++VPNSLFSSQVI+NKSRAQWRAI  KIP
Sbjct: 355 MGDTIKAGSVEGQVIEMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASKIP 414

Query: 450 FQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEE 509
            Q+ DL  + +IS++IK ML+S+ KVFLGKEAP+C+LS++E S+AELTIGCNL RMGKEE
Sbjct: 415 LQIDDLDMIPQISNEIKEMLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGKEE 474

Query: 510 LFSTEQDILLQSVQIMKENGATLG 533
           L++T+Q++LL++V+I+K++G +LG
Sbjct: 475 LYNTQQEVLLEAVKIIKKHGVSLG 489

[Close]

BLAST of Carg16450 vs. Swiss-Prot
Match: sp|P0AEB6|YNAI_ECO57 (Low conductance mechanosensitive channel YnaI OS=Escherichia coli O157:H7 OX=83334 GN=ynaI PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.7e-24
Identity = 75/243 (30.86%), Postives = 126/243 (51.85%), Query Frame = 0


Query: 289 AVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGV 348
           AVIL++  F+     N F +    Q   G D      + ++  + +  + ++   E  G+
Sbjct: 87  AVILTIKLFLL---INQFEK---QQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGM 146

Query: 349 AVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKA--GAIEGQVIEMG 408
           ++  +LT GGIGG+A   A +DIL N  SG+ + F +PFS+GD I++    IEG V E+G
Sbjct: 147 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIG 206

Query: 409 LMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKS 468
              T + + +  P+ VPNSLFSS  + N  R   R IT  I  +  D + V  I + ++ 
Sbjct: 207 WRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVRE 266

Query: 469 MLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKE 528
           MLK+HP +   ++    + +Q   S   + + C  K     E  + +QD+ L+ + I++ 
Sbjct: 267 MLKNHPAID-QRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQS 322

Query: 529 NGA 530
           +GA
Sbjct: 327 HGA 322

[Close]

BLAST of Carg16450 vs. Swiss-Prot
Match: sp|P0AEB5|YNAI_ECOLI (Low conductance mechanosensitive channel YnaI OS=Escherichia coli (strain K12) OX=83333 GN=ynaI PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.7e-24
Identity = 75/243 (30.86%), Postives = 126/243 (51.85%), Query Frame = 0


Query: 289 AVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGV 348
           AVIL++  F+     N F +    Q   G D      + ++  + +  + ++   E  G+
Sbjct: 87  AVILTIKLFLL---INQFEK---QQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGM 146

Query: 349 AVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKA--GAIEGQVIEMG 408
           ++  +LT GGIGG+A   A +DIL N  SG+ + F +PFS+GD I++    IEG V E+G
Sbjct: 147 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIG 206

Query: 409 LMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKS 468
              T + + +  P+ VPNSLFSS  + N  R   R IT  I  +  D + V  I + ++ 
Sbjct: 207 WRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVRE 266

Query: 469 MLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKE 528
           MLK+HP +   ++    + +Q   S   + + C  K     E  + +QD+ L+ + I++ 
Sbjct: 267 MLKNHPAID-QRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQS 322

Query: 529 NGA 530
           +GA
Sbjct: 327 HGA 322

[Close]

BLAST of Carg16450 vs. Swiss-Prot
Match: sp|O25170|Y415_HELPY (Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=HP_0415 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-14
Identity = 58/202 (28.71%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 288 GAV-ILSLVWFI---YRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALA 347
           GAV I+ L W +   ++         +A+++     +E +  + KV    +F + L+ + 
Sbjct: 323 GAVYIMLLAWLVIALFKGYGEALVTNMATKSTHNFRKEVINLILKVVYFLIFIVALLGVL 382

Query: 348 EASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVI 407
           +  G  V +++   GIGG+A A A +D+L N  + + +     FS GD I  G +EG V+
Sbjct: 383 KQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGTVV 442

Query: 408 EMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQV-----ADLSTVS 467
           EMGL  T++ + +   + VPNS  + + I N SR   R + ++I  ++     +  S + 
Sbjct: 443 EMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSR---RKVGRRIKMEIGLTYSSSQSALQ 502

Query: 468 KISDDIKSMLKSHPKVFLGKEA 481
               DIK ML++HPK+  G ++
Sbjct: 503 LCVKDIKEMLENHPKIANGADS 521

[Close]

BLAST of Carg16450 vs. Swiss-Prot
Match: sp|Q9ZKG7|Y415_HELPJ (Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=jhp_0969 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.8e-14
Identity = 58/202 (28.71%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 288 GAV-ILSLVWFI---YRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALA 347
           GAV I+ L W +   ++         +A+++     +E +  + KV    +F + L+ + 
Sbjct: 323 GAVYIMLLAWLVIALFKGYGEALVTNVATKSTHNFRKEVINLILKVVYFLIFIVALLGVL 382

Query: 348 EASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVI 407
           +  G  V +++   GIGG+A A A +D+L N  + + +     FS GD I  G +EG V+
Sbjct: 383 KQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGTVV 442

Query: 408 EMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQV-----ADLSTVS 467
           EMGL  T++ + +   + VPNS  + + I N SR   R + ++I  ++     +  S + 
Sbjct: 443 EMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSR---RKVGRRIKMEIGLTYSSSQSALQ 502

Query: 468 KISDDIKSMLKSHPKVFLGKEA 481
               DIK ML++HPK+  G ++
Sbjct: 503 LCVKDIKEMLENHPKIANGADS 521

[Close]

BLAST of Carg16450 vs. TrEMBL
Match: tr|A0A1S3AVZ3|A0A1S3AVZ3_CUCME (mechanosensitive ion channel protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483257 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 9.1e-236
Identity = 422/514 (82.10%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 20  CSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNVSRTGFLGAPSVCCLHTPSY 79
           CSFQ  K YTKIS+YV++VLRP+VVLNK+YY DESHS K           +VC LH PSY
Sbjct: 9   CSFQSFKPYTKISKYVDRVLRPNVVLNKRYYNDESHSFKRA---------TVCGLHIPSY 68

Query: 80  GTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEAD 139
           GTH   TF PAS +KYWNTIP TS+G LSN R YSSTS RKADITGDTGVP AS+GVE D
Sbjct: 69  GTHRIDTFLPASSMKYWNTIPLTSIGNLSNYRNYSSTSGRKADITGDTGVPAASAGVEPD 128

Query: 140 ISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAP 199
           ISNPPDVGRD LE+VKD WQS VDAASFTGQKA+EVSDE SPHVDKLLDSHPYLKN I P
Sbjct: 129 ISNPPDVGRDLLEKVKDVWQSAVDAASFTGQKAKEVSDELSPHVDKLLDSHPYLKNVIVP 188

Query: 200 VGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYL 259
           V MTL  TLLAW VMPRLLRRFHKYSMRSPVAI+SG+   EEIPYEKSFWGALEDPLRYL
Sbjct: 189 VSMTLAGTLLAWAVMPRLLRRFHKYSMRSPVAIISGALPSEEIPYEKSFWGALEDPLRYL 248

Query: 260 VTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLD 319
           VTF+AFSQIG +VAPTA+A EFVSQACRGAVILSLVWFIYRWKTNVFSRALA+Q  +GLD
Sbjct: 249 VTFFAFSQIGVIVAPTAVAPEFVSQACRGAVILSLVWFIYRWKTNVFSRALATQTSAGLD 308

Query: 320 REKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGL 379
           R++LLTLDKVSSV LFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARD+LGN+LSGL
Sbjct: 309 RDRLLTLDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDVLGNILSGL 368

Query: 380 TMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQ 439
           TMQFSQPFSLGDTIKAG IEGQV+EMGLMTTSLLSAEKFP+VVPNSLFSSQVIINKSRAQ
Sbjct: 369 TMQFSQPFSLGDTIKAGTIEGQVVEMGLMTTSLLSAEKFPVVVPNSLFSSQVIINKSRAQ 428

Query: 440 WRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGC 499
           WRAI K++P QV D+STVS+I+DDIK ML SHPKVFLGKEAPYCFLSQIES+YAELT+GC
Sbjct: 429 WRAIVKRVPLQVDDISTVSQITDDIKKMLMSHPKVFLGKEAPYCFLSQIESTYAELTVGC 488

Query: 500 NLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           NLK+MGK+E FSTEQDILLQSVQI+K  GATLG+
Sbjct: 489 NLKKMGKDESFSTEQDILLQSVQIIKARGATLGS 513

[Close]

BLAST of Carg16450 vs. TrEMBL
Match: tr|A0A0A0L685|A0A0A0L685_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121740 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 3.8e-234
Identity = 421/514 (81.91%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 20  CSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNVSRTGFLGAPSVCCLHTPSY 79
           CSFQ  K YTKISEY ++VLRP+VVLNK+YYKDESHS K  +  G         LH PSY
Sbjct: 9   CSFQSFKPYTKISEYFDRVLRPNVVLNKRYYKDESHSFKRATVRG---------LHIPSY 68

Query: 80  GTHPAATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEAD 139
           GTH   TF PAS +KYWNTIP T  G LSN R YSS S RKADI+GDTGVP ASSGVE D
Sbjct: 69  GTHRIDTFLPASSMKYWNTIPLTCFGNLSNYRNYSSASGRKADISGDTGVPAASSGVEPD 128

Query: 140 ISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAP 199
           ISNPPDVGRD LE+VKD WQS VDAASFTGQKA+EVSDE SPHVDKLLDSHPYLKN I P
Sbjct: 129 ISNPPDVGRDLLEKVKDVWQSAVDAASFTGQKAKEVSDELSPHVDKLLDSHPYLKNVIVP 188

Query: 200 VGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYL 259
           V MTL ATLLAW+VMPRLL+RFHKYSMRSPVAI+SGS   EEIPYEKSFWGALEDPLRYL
Sbjct: 189 VSMTLGATLLAWLVMPRLLKRFHKYSMRSPVAIISGSLPSEEIPYEKSFWGALEDPLRYL 248

Query: 260 VTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLD 319
           VTF+AFSQIG +VAPTA+A EFVSQACRGAVILSLVWFIYRWKTNV SRALA++ F+GLD
Sbjct: 249 VTFFAFSQIGVIVAPTAVAPEFVSQACRGAVILSLVWFIYRWKTNVLSRALATKTFAGLD 308

Query: 320 REKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGL 379
           R++LLTLDKVSSV LFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGN+LSGL
Sbjct: 309 RDRLLTLDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNILSGL 368

Query: 380 TMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQ 439
           TMQFSQPFSLGDTIKAGAIEGQV+EMGLMTTSLLSAEKFP+VVPNSLFSSQVIINKSRAQ
Sbjct: 369 TMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKFPVVVPNSLFSSQVIINKSRAQ 428

Query: 440 WRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGC 499
           WRAI K++P QV D+STVS+I+DDIK+ML SHPKVFLGKEAPYCFLSQIES+YAELT+GC
Sbjct: 429 WRAIVKRVPLQVDDISTVSQITDDIKNMLTSHPKVFLGKEAPYCFLSQIESTYAELTLGC 488

Query: 500 NLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           NL++MGK+E FSTEQDILLQSVQI+K  GATLG+
Sbjct: 489 NLRKMGKDESFSTEQDILLQSVQIIKAKGATLGS 513

[Close]

BLAST of Carg16450 vs. TrEMBL
Match: tr|M5XMA5|M5XMA5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G174600 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 8.4e-173
Identity = 325/537 (60.52%), Postives = 400/537 (74.49%), Query Frame = 0


Query: 1   MRLFILNSIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPS-VVLNKQYYKDESHSLKN 60
           +RL IL S+          C    C SY K   Y  Q +RP+   +N+ YY  E+ SLK 
Sbjct: 4   VRLSILKSL----------CKSTSC-SYAKFGSY--QYIRPAYAFVNRSYYSKETQSLKT 63

Query: 61  VSRTGFLGAPSVCCLHTPSYGTHPAATFSPASPVKYWNTIPPTSL-GYLSNPRFYSSTSS 120
            ++       S    +  SY T P + FSP     +  +  P  L   + N R YSS+  
Sbjct: 64  FAKMHSRALGSESLANIQSYRTKPISAFSPTLSNSHIRSATPLFLVNPILNSRSYSSSVG 123

Query: 121 RKADITGD--TGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVS 180
             AD  G    GVP AS G E DI N   VG DW+ +VKD WQS VDAA+++GQKA+E S
Sbjct: 124 SNADKAGQPGLGVPAASGGSEVDIGNSGIVGSDWVAKVKDAWQSAVDAATYSGQKAKETS 183

Query: 181 DEFSPHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGS 240
            E SP+V +LLDS+P+L+N + PVG TL  T+ AW+VMPRL RR HKY+ +   A+LSG 
Sbjct: 184 VELSPYVQQLLDSYPHLRNVVVPVGCTLAGTIFAWLVMPRLFRRCHKYASQGRTALLSGR 243

Query: 241 TSIEEIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVW 300
            S E +PYEKSFWGALEDP+RYLVTF AFSQIG +VAPT IAS++++ A RGAVILS VW
Sbjct: 244 LSEEPVPYEKSFWGALEDPVRYLVTFMAFSQIGMLVAPTTIASQYLAPAWRGAVILSFVW 303

Query: 301 FIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTV 360
           F++RWKTNVF+R LA+Q+  GLDR+KLL +D +SS+GLF IG+MALAEA GVAVQS+LTV
Sbjct: 304 FLHRWKTNVFTRVLATQSLPGLDRDKLLAIDNISSIGLFVIGIMALAEACGVAVQSILTV 363

Query: 361 GGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAE 420
           GGIGGVATAFAARD+LGNVLSG +MQFS+PFSLGDTIKAGAIEGQV+EMGL TTSLL+AE
Sbjct: 364 GGIGGVATAFAARDVLGNVLSGFSMQFSKPFSLGDTIKAGAIEGQVVEMGLTTTSLLNAE 423

Query: 421 KFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFL 480
           KFP++VPNSLFSSQVI+NKSRAQWRAI  KIP Q+ DL  + +IS+DIKSML+SH KVFL
Sbjct: 424 KFPVIVPNSLFSSQVIVNKSRAQWRAIVTKIPLQINDLDKIPQISNDIKSMLRSHSKVFL 483

Query: 481 GKEAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
           GKEAPYCFLS++ESS+AELT+GCNLK M K EL+STE++I+L+S QI+KE+GA LG+
Sbjct: 484 GKEAPYCFLSRLESSFAELTLGCNLKHMSKGELYSTEEEIILRSAQIIKEHGARLGS 527

[Close]

BLAST of Carg16450 vs. TrEMBL
Match: tr|B9I8N4|B9I8N4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G088200v3 PE=4 SV=2)

HSP 1 Score: 609.4 bits (1570), Expect = 7.9e-171
Identity = 312/492 (63.41%), Postives = 395/492 (80.28%), Query Frame = 0


Query: 42  SVVLNKQYYKDESHSLKNVSRTGFLGAPSVCCLHTPSYGTHPAATF-SPASPVKYWNTIP 101
           S ++N+ YYKDES    N+S    +   S  C+++  Y   P   F S  S V   + +P
Sbjct: 40  SAIINRDYYKDESKLAGNLS--NIIAMRSDACVNSQCYKNKPMRGFLSTPSNVLLRSAVP 99

Query: 102 PTSLGYLSNPRFYSSTSSRKADITGDTGVPLASSGVEADISNPPDVGRDWLERVKDGWQS 161
             S+    + R +S +S  K D +G + V  +SSG + D+SN   +G DW+++VK+ WQS
Sbjct: 100 FFSMNPGLSCRSFSWSSGGKVDKSGASEVSASSSGSDVDVSNSGGIGSDWIDKVKEAWQS 159

Query: 162 VVDAASFTGQKAREVSDEFSPHVDKLLDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRR 221
            V A +++ QKA+E+S E +P+V +LLDSHPYLKN + PVG TLT T++AWVVMPRLLRR
Sbjct: 160 AVHAVTYSEQKAKEISAELTPYVQQLLDSHPYLKNVVVPVGWTLTGTVVAWVVMPRLLRR 219

Query: 222 FHKYSMRSPVAILSGSTSIEEIPYEKSFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASE 281
           FHKYS+++PVA+LSG TS E+I YEKS WGALEDPLRY++TF AFSQI  MVAPT IAS+
Sbjct: 220 FHKYSLQTPVALLSGGTSGEQISYEKSIWGALEDPLRYVITFMAFSQIAVMVAPTTIASQ 279

Query: 282 FVSQACRGAVILSLVWFIYRWKTNVFSRALASQNFSGLDREKLLTLDKVSSVGLFAIGLM 341
           +++QA RGAVILS VWF++RWKTNVF+R +AS   + +DREKLLTLD+VSSVGLF IG+M
Sbjct: 280 YIAQAWRGAVILSFVWFLHRWKTNVFNRVIAS---ATVDREKLLTLDRVSSVGLFVIGVM 339

Query: 342 ALAEASGVAVQSMLTVGGIGGVATAFAARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEG 401
           ALAEA GVAVQS+LTVGGIGGVATAFAA+D+LGNVLSGL+MQFS+PFSLGDTIKAGA+EG
Sbjct: 340 ALAEACGVAVQSILTVGGIGGVATAFAAKDVLGNVLSGLSMQFSKPFSLGDTIKAGAVEG 399

Query: 402 QVIEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPFQVADLSTVSKI 461
           QV+EMGL TTSLL+AEKFP++VPN+LFSSQVI+NKSRAQWRA+  KIP  V D+  + +I
Sbjct: 400 QVVEMGLTTTSLLNAEKFPVLVPNALFSSQVIVNKSRAQWRAMVSKIPVTVDDVEKIPQI 459

Query: 462 SDDIKSMLKSHPKVFLGKEAPYCFLSQIESSYAELTIGCNLKRMGKEELFSTEQDILLQS 521
           S+DIK+MLKS+  +FLGKEAPYC+LS+IESS+AELT+GCNLK+M K EL+STEQDILLQS
Sbjct: 460 SNDIKNMLKSNANIFLGKEAPYCYLSRIESSFAELTLGCNLKQMSKNELYSTEQDILLQS 519

Query: 522 VQIMKENGATLG 533
           V+I+KE+GA LG
Sbjct: 520 VRIIKEHGARLG 526

[Close]

BLAST of Carg16450 vs. TrEMBL
Match: tr|A0A061E0U5|A0A061E0U5_THECC (Mechanosensitive ion channel protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005285 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.0e-170
Identity = 317/527 (60.15%), Postives = 403/527 (76.47%), Query Frame = 0


Query: 8   SIYSASKSYLNPCSFQYCKSYTKISEYVNQVLRPSVVLNKQYYKDESHSLKNVSRTGFLG 67
           S+Y +S+  L P    Y K    + +  N V      ++  Y K ES S    + T    
Sbjct: 15  SLYPSSQPPLLPLYNSYMKLTRNVDQ--NYVRSSYAYVDSIYNKRESQSAAKFANTHIKV 74

Query: 68  APSVCCLHTPSYGTHP-AATFSPASPVKYWNTIPPTSLGYLSNPRFYSSTSSRKADITGD 127
             S    H   +  +P AA+   +S ++Y +  P   +  +   + +S + S K D + +
Sbjct: 75  VVSDPLAHKCFHKINPMAASSLNSSTLRYQSVFPFVLISPVLRNQSHSLSFSSKTDKSVE 134

Query: 128 TGVPLASSGVEADISNPPDVGRDWLERVKDGWQSVVDAASFTGQKAREVSDEFSPHVDKL 187
           + V  +S G E D+SN   +G DW+++VK+ W + VDA  +TGQKA+E S+E  PHV++L
Sbjct: 135 SEVSASSGGGEVDVSNSGVIGSDWVDKVKEAWHNAVDAVGYTGQKAKEASNELKPHVEQL 194

Query: 188 LDSHPYLKNEIAPVGMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSTSIEEIPYEK 247
           LDSHPYLK+ + PVG TLT T+LAWVVMPRLLRRFHKY+M++ V + SGS   +++PYEK
Sbjct: 195 LDSHPYLKDVVVPVGFTLTGTILAWVVMPRLLRRFHKYAMQTSV-LPSGSLLGDQVPYEK 254

Query: 248 SFWGALEDPLRYLVTFYAFSQIGKMVAPTAIASEFVSQACRGAVILSLVWFIYRWKTNVF 307
           SFWGALEDP+RYL+TF AFSQIG MVAP+ IAS++V+QA RGA ILS VWF++RWKTNV 
Sbjct: 255 SFWGALEDPVRYLITFMAFSQIGMMVAPSTIASQYVAQAWRGAAILSFVWFLHRWKTNVL 314

Query: 308 SRALASQNFSGLDREKLLTLDKVSSVGLFAIGLMALAEASGVAVQSMLTVGGIGGVATAF 367
            RALA+QN +G DREKLLT+DKVSSVGLF IG+MALAEA GVAVQS+LTVGGIGGVATAF
Sbjct: 315 DRALAAQNLAGTDREKLLTMDKVSSVGLFVIGVMALAEACGVAVQSILTVGGIGGVATAF 374

Query: 368 AARDILGNVLSGLTMQFSQPFSLGDTIKAGAIEGQVIEMGLMTTSLLSAEKFPIVVPNSL 427
           AARDILGNVLSGL+MQFS+PFSLGDTIKAG+IEGQV++MGL +T+LL++EK+P++VPNSL
Sbjct: 375 AARDILGNVLSGLSMQFSKPFSLGDTIKAGSIEGQVVDMGLTSTTLLNSEKYPVLVPNSL 434

Query: 428 FSSQVIINKSRAQWRAITKKIPFQVADLSTVSKISDDIKSMLKSHPKVFLGKEAPYCFLS 487
           FSSQVI+NKSRAQWRA+  K+P Q+ DL  + +IS+DIK MLKS+ KVFLGKEAPYCFLS
Sbjct: 435 FSSQVIMNKSRAQWRAVVTKVPLQIEDLDKIPQISNDIKGMLKSNSKVFLGKEAPYCFLS 494

Query: 488 QIESSYAELTIGCNLKRMGKEELFSTEQDILLQSVQIMKENGATLGN 534
            IESSYAELTIGCNL+ M K+EL+ST+QDILLQSVQI+K++GATLGN
Sbjct: 495 HIESSYAELTIGCNLRHMSKDELYSTQQDILLQSVQIIKKHGATLGN 538

The following BLAST results are available for this feature:

BLAST of Carg16450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937845.1	3.3e-298	99.06	mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita moschata]	[more]
XP_023538305.1	6.3e-297	98.69	mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita pepo subsp...	[more]
XP_022969688.1	1.3e-294	97.75	mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita maxima]	[more]
XP_022147379.1	1.2e-242	82.06	mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia]...	[more]
XP_008438011.1	1.4e-235	82.10	PREDICTED: mechanosensitive ion channel protein 1, mitochondrial [Cucumis melo] ...	[more]

BLAST of Carg16450 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00290.1	5.0e-155	63.29	Mechanosensitive ion channel protein	[more]
AT4G00234.1	5.1e-75	57.54	BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel protein...	[more]
AT1G58200.1	7.3e-13	28.06	MSCS-like 3	[more]
AT5G10490.1	6.8e-11	26.67	MSCS-like 2	[more]

BLAST of Carg16450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZL4\|MSL1_ARATH	9.0e-154	63.29	Mechanosensitive ion channel protein 1, mitochondrial OS=Arabidopsis thaliana OX...	[more]
sp\|P0AEB6\|YNAI_ECO57	6.7e-24	30.86	Low conductance mechanosensitive channel YnaI OS=Escherichia coli O157:H7 OX=833...	[more]
sp\|P0AEB5\|YNAI_ECOLI	6.7e-24	30.86	Low conductance mechanosensitive channel YnaI OS=Escherichia coli (strain K12) O...	[more]
sp\|O25170\|Y415_HELPY	3.7e-14	28.71	Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori (strain ATCC ...	[more]
sp\|Q9ZKG7\|Y415_HELPJ	4.8e-14	28.71	Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori (strain J99 ...	[more]

BLAST of Carg16450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVZ3\|A0A1S3AVZ3_CUCME	9.1e-236	82.10	mechanosensitive ion channel protein 1, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0L685\|A0A0A0L685_CUCSA	3.8e-234	81.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121740 PE=4 SV=1	[more]
tr\|M5XMA5\|M5XMA5_PRUPE	8.4e-173	60.52	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G174600 PE=4 SV=1	[more]
tr\|B9I8N4\|B9I8N4_POPTR	7.9e-171	63.41	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G088200v3 PE=...	[more]
tr\|A0A061E0U5\|A0A061E0U5_THECC	3.0e-170	60.15	Mechanosensitive ion channel protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR010920	LSM_dom_sf
IPR011014	MscS_channel_TM-2
IPR006685	MscS_channel
IPR023408	MscS_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16450-RA	Carg16450-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023408	Mechanosensitive ion channel MscS domain superfamily	GENE3D	G3DSA:2.30.30.60		coord: 386..434 e-value: 8.6E-11 score: 43.4
IPR006685	Mechanosensitive ion channel MscS	PFAM	PF00924	MS_channel	coord: 328..529 e-value: 1.0E-35 score: 123.1
None	No IPR available	PANTHER	PTHR30566	YNAI-RELATED MECHANOSENSITIVE ION CHANNEL	coord: 137..532
None	No IPR available	PANTHER	PTHR30566:SF5	MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL	coord: 137..532
IPR011014	Mechanosensitive ion channel MscS, transmembrane-2	SUPERFAMILY	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region	coord: 287..369
IPR010920	LSM domain superfamily	SUPERFAMILY	SSF50182	Sm-like ribonucleoproteins	coord: 370..435

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16450	CmaCh12G008750	Cucurbita maxima (Rimu)	carcmaB1254
Carg16450	CmoCh12G008810	Cucurbita moschata (Rifu)	carcmoB1223
Carg16450	Cp4.1LG07g07250	Cucurbita pepo (Zucchini)	carcpeB1263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16450	Melon (DHL92) v3.5.1	carmeB0899
Carg16450	Watermelon (97103) v1	carwmB0912