Carg16443 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16443
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor PIF3 isoform X1
Location	Cucurbita_argyrosperma_scaffold_130 : 552995 .. 558880 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTGATTGATATTGAATTTGGGTATCAATTTCATTCAAAACAATCGGGTTTTGCCTCAATCTCAGGGAGCAATCTGGAGGAACAAGAACAAGACCAAGAGCCTTCTTCTAATCATTGATGAATGTCACACTCACTGGACTCTAGCCGCCGGCTCACGGCGGCGATGACGGTGGTGGCACTGACCCAGTTCATCTCATTCAGAGCTTTCACGGTGGACCCACTTCAACCTAATTTGAGACTACGATTAAGAAGGTGCCACCGTCCATTTCTCTCTCTTTTACGTTCCATTGGGATCTTCATTCGATTTATCCCCATTTTGCATTTTCTTTCTTGTTCGTCAGAATCTAACAATTAAAGAAATATTTCATCTGGGATCTGTTGTTTTTGCCTCTTTTTCTTGAATCGAGCATGATTTTGGATTTGGGTGTCTCTTAGATTCATTAAACAATTGGATATTACCCTTTTGAGTTGTTAAAATATATTTTCCCCCAAAACTCTGTTTGACTCCCCTGATAGGGACATTGGTTTCATTCTAAGCCACTTTGATGTTCTAAACATGATAAATCCACTTTAAATTCATCTGGGATCTGTTGCTTTTGCCTATTTTTCTTGAGTTCTTTACTACAACGAGCATGATTTTGGATTTGGGTGTCTCTTAGATTCATTAAACAATTAGATATTACCCATTTGAGTTGTTAAAATATATTTTCCCCCAAAACTCTGTTTATGATAGGGACATTGGTTTCATTCTAAGCCACTTTAATGTTCTAAACATGACAAATCCCTTTTAAATTCATCTGGGTTCTTCTTATTTTAGTGTTTAAACGTGGCTTATTTCCCTGTAAAGAGGCAAATCCATGCCTCTATCTGAGCTTTATCGTGTGGCCAGAGGAAAGAACAACATGGTTTCTGCAGATTCATCTCTAAAGTAAGCAAAAAATTGACTTATGGATCATAACAATCGTTGTTTCTTTGTTTATTGTTTGTGAAATTCATTTATTCTTTCTGGGTTTTGTTCTAAATCTTAGCTTCTTGTTCCTTGTGGCTTTTTCATGAAGCCCTGAAAATGATGTTTATGAACTTGTGTGGGAGAATGGCCAAATTTTGCTGCAAGGACAGTCCAGTAAAGCCAGGAAGAACTCATGTGTACCATTTCATAGTCCCAAGGGTACTGATTCTGTAATCAGAGATGTATTGGGACATGATGATGATGATGATGATGATATGGTGCCTTGGCTTAATTATCCTCTTGATGAACATTCTTCTGAATTCTTACTTGAATTATCTGGGGTCACTGTTAATGATCCCCTCTCGCGCAATAGTACCAGTAAGCAGGTCGATGGCGATGCGCAGCTCAATCATTTGCACGGTGCTCGTCTTGAAGGTGGCAATGTTTCCAAGGTTTCTTCGATGGATGTTTCGAGCGCTCGAGCTAGAAGTTGCACGAATCAATTACATTCATCAGCATCTCAGCAAAGCCAGATATCACTTCCACATCTCAGTTCTTCAAGCACAGCAAGGCATAATTCATCGAATATCATGAATTTTTCCCATTTTCTGCGACCTGCTGTTCTTAAATCCAATGATCAGAATCGTGACGTGACTAAAGGTGTCGGTTTTTCGAGTATGCGCTGTGTAGGCAGCGTGGATAAGAATTGTTCAGCAGGTAATACTCAACCTTATGAATCATCGTTTTTTAAAACTCGTGGTAGTATAAGAAATGAATCGAAATCATGCTGTGAAAATGCAGTAGTGCCTTCCATAGATAATAGCAATCCATCAGGTGTCAAGGCTCCTGAGACACTGGAGGTTGTCGAACAGCCAGAGGTTGCTTGTTTGGGAGATTCAGCCAAAAACGATGACCATCCTGAACCGTGTCTTGAAGCAGGTGCAAGTAAAGGATTGTCAGATAGTGAGAAGGTTGTTGAATCTGTAATAGCTGCTTCTGTTTGTTCACGCACTAGCATGAAACGAGCTTTGGATGATACGACCGTCGTTAGGAAGAGAAAATGTCACGACACCGAGGATTCCGAATGGCACAGTGATGTGAGTACCAAATTGTATACTCGTCTTGCTCTGTGTACCTCGGTCACTTTTCGAATCGATAAATGAAAAGAATTCATCAAGTGCAGGATGTAGAAGAAGAAAGCAATGACGTGAACAGAGCGACTCCTGTTCGAGGAAACGGTTCGAAACGAAGCAGGGCAGCAGAAGTGCATAATTTATCAGAAAGAGTGAGTCTTGTTGCTATGAAAGTTTCTTTTTTTTGCTTCAAATACAACATTGAGCCTTTTTAGTGAACTCATTCTTAAATTTATGCCACAGCGACGTAGAGATAGGATCAACGAGAAGATGCGTGCGTTGCAAGAACTCATACCGAATTGTAATAAGGTTCGGCTATTAATACTCTCTTGTTCGGGTTCATTTATTGCTCGATCAACTGAATATTTTAAACATCTTGAAAGTAGTTTGACTTGAATTTTATTAGCTATATTCTTGAGCTGAATTCTATAATGGAACTATTAGGTTGACAAAGCTTCCATGCTCGATGAAGCGATCGAGTACTTGAAAACGCTTCAACTTCAGGTTCAGGTGATGCTCTTTTCCCTGAGGCAGAAAAAATGTATTTCTTTTATGTGAGATCTCACATTGGTTGGGGAGGAAAACGAAACACCCTTTAGAAGGGTGTGGAAATCTCTCCCTAACAGACGCGTTTTAAAAACTATGAGGCTGACAACGATACGTAACAGGCCAAAATGGATAATTTCTGTTAGTGGTGGATTTTGTGTGTTACAAATGGTATCACAGCTAGACACCGGGCGATATGCCAACGAGAGGAGGTTGAGCCCCGAAAGGGGTGAGATGAGGTGATGTGCCAACAAGGACGTTGGGCTTCGAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTATGGAAACCTCTCCCTAGCAAACGCGTTTTTAGAAACCATGAGGCTGACAGCGATTCATAACGGGCCAAAACGGACAATATCTGTTAGCTGTGGATTTTGTCTGTTACAAATGGTATCAGAGCTAGACACCAGACGATGTGCCAGTGAGGAGGCTAATTCTTGAAGGGGGTGGCATGAGGCGATGTGCCAGTAAGGACGTTGGGCCCGAAGGGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGGAAACCTCTCCATAGCAGACGCGTTTTAAAAATCATGAGGCTGACAACAATACGTAACGGGCCAAAACAGGCAATATCTGTTAGTTGTGGATTTTGTCTGTTACAAATAGTATTAGAGCCAGACACCGGACGATGTGCCAGTGAGGACGCTAAGCCCTGAAGGGGGCGGCATGAGGCGATGTGCCATTTAGGACACTGGGCCTCGAAGGGGGGTGGATTGTGAGATCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGAAAACCTCTCCCTAGCAGGTGCGTTTTAAAAACTTTGAGGGAAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATCTACTAGCGGTGGGTCGGGGCCTGGGCGATTACATTTTATCTCTCCACCCCGACAATTCAGAAGCGATCATTGTTTACAACATTCAAGTAATCTGTCCATGTTTTTCACATATTATGCAGATTATGTCGATGGGAGCTGGTTTGTTCATGCCTCCCATGATGTTCCCTGGAGGACTGCCACCCATGAATGCACCTCATATTTATTCACCCATGGGCGTAGGAATAGGAATGGGATATGGGATAGCTATGCCTGACATGAATGGTGGTTCTCCTGGCTATCCCATGGCTCAAATGCCACACGTGCAAGGAACGCATTTCCCGAGCCCATCAATACCAGCTCAAACTGTAATGCATGGAATGCCAGGTTCTAACTTTCATGTCCTTGGACTTCCTGGTCAAGGACTCCCCTTGTCGATGCCACATGGCCCGATTGCTCCGTTTCGTGGAGGACCTTTTATGACTAATTCCAGTGTGGCAGTAGCTCCTGTAGAGAGTTTCGGTTTAGCTGCAGCTTGTAGCTCGAAAGATTCGTCCCCGAAGATGAATGCACCGACCGTGCGAAATGGTGGCAACGACCCTTTAATAACATCTCCTAGACAGGTGTGTAGATTTAAATTTTAAAAGCATGTGATATTATGTTATGTTATGTGAAGGTAGGATAGAGTTTTTATCCTTTTTTTTAAAACATGAGAAGAGACAAATGCTCGGAATTACAAACTTCAAATGGGAGAGGGTTTTTATCATTGTTGATATGGATGGTGTTGGCAAGAAGATGATGAGATGGTTAAAAAAAGGGCCGACGCTGTTACATCGCCCAATGTCTGGCTCTGATACCTTTTGTAACAGTCCAGGCCCACCGCTAGAAGATTTTGTCTGTTTTGGCTTGTTACATATTCTCGTCAGTCTCACGGTTTTACAACGCGTCTGTTAGGGAGAGTTTTCCACACTTATAAGGAATGCTTCGTTTCACTCTTCAACTGATATGGGATCTCACAATTCACCCCTCTTGGGGGCCAATGTTCTCATTGGCACATCGCTTGGTGTCTCACTCTGATACCATTTGTAACAGCCTAAGCCCCCTACTAGTAGATATTGTCTGTTTTGGCTCGTTACGTATCGTCGTCAGTCTCACGGTTTTAAAACACGTTTACTAGGGAGAGGTTTCCACACCCTTATATAAGGAATGATTCCCTCTCCAACGATGTGGGATCTCACAATTCACCCCTCTTGGGGGTCCAGCATCCGCTGGCACATCACCTAGTGTTGGGCTCTAATACCATTTGTAACACAATCCACCCCTCTTGGGGGTCCAGCATCGGCTGGCAAATCACCCAGTGTTAGGCTCTAATACCATTTGTAACAGCTTAAGCTCACTACTAGTAGATATTGTGCGTTTTGACCTGTTACATATCGTCGTCAGTTTCACGATTTTAAAACGCGTTTGTTAGGGAGAGTTTTCCACACTCTTATAAGGAATGCTTTGTAACTCCCTCCAACCGATGTCGGGTCTCATAATTCACCCTTCTTGGGGGCCAACGTCCTCGCTGGCACATCGCCCGGTGTCTGGCTCTAATACCATTTATAATAGCCTAAGCTCACTACTAGCAGATATTGTCCATTTTGACCTGTTACATATCGTCATCAGTCTCACGGTTTTAAAACGCGTTTGTTAGAGAGAGTTTTCCACACTCTTATAAAGAATGCTTCGTTCCTCTCTCCAATCTACGGATCTCACAATTCACCTCTCTTGGGGGCCAACATCCTTGTTGGCACATCGCCCGGTGTCTGACTCTGATACCATTTGTAACAGTCTAAGCCCACTACTAGTACATATTGTTCGTTTTGGCCCATTACATATCGTCGTCAATCTCACGGTTTTAAAATGCGTTTATTAGAGAGAGGTTTTCACACCTTTATGAAGAATGTTTCATTTCCCTCTCCAACCGATATGAGATTGCACATGAAAATATTGAATTATCTTGTTGCTGCAGGGTAACGAACAAGCTTCCAGTGTCAATGGCAGTGGTACGAACCCGACCAACAATAACGAAACGACGTTATAACTAGCTTTGTTAATAACATCATTGGTCAGGGCTCATGGCATTGGTTCATGAACTTCACTTGATATCAGCAAATATAGATGAAGTAGGAGATCATCCCGCTTTGGACATGGACATATGTAATTCTTGCTACCACTTGGAGGGGACTTGGCAGGATGATCTGGACATATGTAATTCTTGCTACCACTTGGAGGGGACTTGGCAGGATGATCTTTCAATGGAATTAGCTGATTGA

mRNA sequence

TTTATTTGATTGATATTGAATTTGGGTATCAATTTCATTCAAAACAATCGGGTTTTGCCTCAATCTCAGGGAGCAATCTGGAGGAACAAGAACAAGACCAAGAGCCTTCTTCTAATCATTGATGAATGTCACACTCACTGGACTCTAGCCGCCGGCTCACGGCGGCGATGACGGTGGTGGCACTGACCCAGTTCATCTCATTCAGAGCTTTCACGGTGGACCCACTTCAACCTAATTTGAGACTACGATTAAGAAGGTGCCACCGTCCATTTCTCTCTCTTTTACGTTCCATTGGGATCTTCATTCGATTTATCCCCATTTTGCATTTTCTTTCTTGTTCGTCAGAATCTAACAATTAAAGAAATATTTCATCTGGGATCTGTTGTTTTTGCCTCTTTTTCTTGAATCGAGCATGATTTTGGATTTGGGTGTCTCTTAGATTCATTAAACAATTGGATATTACCCTTTTGAGTTGTTAAAATATATTTTCCCCCAAAACTCTGTTTGACTCCCCTGATAGGGACATTGGTTTCATTCTAAGCCACTTTGATGTTCTAAACATGATAAATCCACTTTAAATTCATCTGGGATCTGTTGCTTTTGCCTATTTTTCTTGAGTTCTTTACTACAACGAGCATGATTTTGGATTTGGGTGTCTCTTAGATTCATTAAACAATTAGATATTACCCATTTGAGTTGTTAAAATATATTTTCCCCCAAAACTCTGTTTATGATAGGGACATTGGTTTCATTCTAAGCCACTTTAATGTTCTAAACATGACAAATCCCTTTTAAATTCATCTGGGTTCTTCTTATTTTAGTGTTTAAACGTGGCTTATTTCCCTGTAAAGAGGCAAATCCATGCCTCTATCTGAGCTTTATCGTGTGGCCAGAGGAAAGAACAACATGGTTTCTGCAGATTCATCTCTAAACCCTGAAAATGATGTTTATGAACTTGTGTGGGAGAATGGCCAAATTTTGCTGCAAGGACAGTCCAGTAAAGCCAGGAAGAACTCATGTGTACCATTTCATAGTCCCAAGGGTACTGATTCTGTAATCAGAGATGTATTGGGACATGATGATGATGATGATGATGATATGGTGCCTTGGCTTAATTATCCTCTTGATGAACATTCTTCTGAATTCTTACTTGAATTATCTGGGGTCACTGTTAATGATCCCCTCTCGCGCAATAGTACCAGTAAGCAGGTCGATGGCGATGCGCAGCTCAATCATTTGCACGGTGCTCGTCTTGAAGGTGGCAATGTTTCCAAGGTTTCTTCGATGGATGTTTCGAGCGCTCGAGCTAGAAGTTGCACGAATCAATTACATTCATCAGCATCTCAGCAAAGCCAGATATCACTTCCACATCTCAGTTCTTCAAGCACAGCAAGGCATAATTCATCGAATATCATGAATTTTTCCCATTTTCTGCGACCTGCTGTTCTTAAATCCAATGATCAGAATCGTGACGTGACTAAAGGTGTCGGTTTTTCGAGTATGCGCTGTGTAGGCAGCGTGGATAAGAATTGTTCAGCAGGTAATACTCAACCTTATGAATCATCGTTTTTTAAAACTCGTGGTAGTATAAGAAATGAATCGAAATCATGCTGTGAAAATGCAGTAGTGCCTTCCATAGATAATAGCAATCCATCAGGTGTCAAGGCTCCTGAGACACTGGAGGTTGTCGAACAGCCAGAGGTTGCTTGTTTGGGAGATTCAGCCAAAAACGATGACCATCCTGAACCGTGTCTTGAAGCAGGTGCAAGTAAAGGATTGTCAGATAGTGAGAAGGTTGTTGAATCTGTAATAGCTGCTTCTGTTTGTTCACGCACTAGCATGAAACGAGCTTTGGATGATACGACCGTCGTTAGGAAGAGAAAATGTCACGACACCGAGGATTCCGAATGGCACAGTGATGATGTAGAAGAAGAAAGCAATGACGTGAACAGAGCGACTCCTGTTCGAGGAAACGGTTCGAAACGAAGCAGGGCAGCAGAAGTGCATAATTTATCAGAAAGACGACGTAGAGATAGGATCAACGAGAAGATGCGTGCGTTGCAAGAACTCATACCGAATTGTAATAAGATTATGTCGATGGGAGCTGGTTTGTTCATGCCTCCCATGATGTTCCCTGGAGGACTGCCACCCATGAATGCACCTCATATTTATTCACCCATGGGCGTAGGAATAGGAATGGGATATGGGATAGCTATGCCTGACATGAATGGTGGTTCTCCTGGCTATCCCATGGCTCAAATGCCACACGTGCAAGGAACGCATTTCCCGAGCCCATCAATACCAGCTCAAACTGTAATGCATGGAATGCCAGGTTCTAACTTTCATGTCCTTGGACTTCCTGGTCAAGGACTCCCCTTGTCGATGCCACATGGCCCGATTGCTCCGTTTCGTGGAGGACCTTTTATGACTAATTCCAGTGTGGCAGTAGCTCCTGTAGAGAGTTTCGGTTTAGCTGCAGCTTGTAGCTCGAAAGATTCGTCCCCGAAGATGAATGCACCGACCGTGCGAAATGGTGGCAACGACCCTTTAATAACATCTCCTAGACAGGATGATCTGGACATATGTAATTCTTGCTACCACTTGGAGGGGACTTGGCAGGATGATCTTTCAATGGAATTAGCTGATTGA

Coding sequence (CDS)

ATGCCTCTATCTGAGCTTTATCGTGTGGCCAGAGGAAAGAACAACATGGTTTCTGCAGATTCATCTCTAAACCCTGAAAATGATGTTTATGAACTTGTGTGGGAGAATGGCCAAATTTTGCTGCAAGGACAGTCCAGTAAAGCCAGGAAGAACTCATGTGTACCATTTCATAGTCCCAAGGGTACTGATTCTGTAATCAGAGATGTATTGGGACATGATGATGATGATGATGATGATATGGTGCCTTGGCTTAATTATCCTCTTGATGAACATTCTTCTGAATTCTTACTTGAATTATCTGGGGTCACTGTTAATGATCCCCTCTCGCGCAATAGTACCAGTAAGCAGGTCGATGGCGATGCGCAGCTCAATCATTTGCACGGTGCTCGTCTTGAAGGTGGCAATGTTTCCAAGGTTTCTTCGATGGATGTTTCGAGCGCTCGAGCTAGAAGTTGCACGAATCAATTACATTCATCAGCATCTCAGCAAAGCCAGATATCACTTCCACATCTCAGTTCTTCAAGCACAGCAAGGCATAATTCATCGAATATCATGAATTTTTCCCATTTTCTGCGACCTGCTGTTCTTAAATCCAATGATCAGAATCGTGACGTGACTAAAGGTGTCGGTTTTTCGAGTATGCGCTGTGTAGGCAGCGTGGATAAGAATTGTTCAGCAGGTAATACTCAACCTTATGAATCATCGTTTTTTAAAACTCGTGGTAGTATAAGAAATGAATCGAAATCATGCTGTGAAAATGCAGTAGTGCCTTCCATAGATAATAGCAATCCATCAGGTGTCAAGGCTCCTGAGACACTGGAGGTTGTCGAACAGCCAGAGGTTGCTTGTTTGGGAGATTCAGCCAAAAACGATGACCATCCTGAACCGTGTCTTGAAGCAGGTGCAAGTAAAGGATTGTCAGATAGTGAGAAGGTTGTTGAATCTGTAATAGCTGCTTCTGTTTGTTCACGCACTAGCATGAAACGAGCTTTGGATGATACGACCGTCGTTAGGAAGAGAAAATGTCACGACACCGAGGATTCCGAATGGCACAGTGATGATGTAGAAGAAGAAAGCAATGACGTGAACAGAGCGACTCCTGTTCGAGGAAACGGTTCGAAACGAAGCAGGGCAGCAGAAGTGCATAATTTATCAGAAAGACGACGTAGAGATAGGATCAACGAGAAGATGCGTGCGTTGCAAGAACTCATACCGAATTGTAATAAGATTATGTCGATGGGAGCTGGTTTGTTCATGCCTCCCATGATGTTCCCTGGAGGACTGCCACCCATGAATGCACCTCATATTTATTCACCCATGGGCGTAGGAATAGGAATGGGATATGGGATAGCTATGCCTGACATGAATGGTGGTTCTCCTGGCTATCCCATGGCTCAAATGCCACACGTGCAAGGAACGCATTTCCCGAGCCCATCAATACCAGCTCAAACTGTAATGCATGGAATGCCAGGTTCTAACTTTCATGTCCTTGGACTTCCTGGTCAAGGACTCCCCTTGTCGATGCCACATGGCCCGATTGCTCCGTTTCGTGGAGGACCTTTTATGACTAATTCCAGTGTGGCAGTAGCTCCTGTAGAGAGTTTCGGTTTAGCTGCAGCTTGTAGCTCGAAAGATTCGTCCCCGAAGATGAATGCACCGACCGTGCGAAATGGTGGCAACGACCCTTTAATAACATCTCCTAGACAGGATGATCTGGACATATGTAATTCTTGCTACCACTTGGAGGGGACTTGGCAGGATGATCTTTCAATGGAATTAGCTGATTGA

Protein sequence

MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPKGTDSVIRDVLGHDDDDDDDMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDGDAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARHNSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKIMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFRGGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQDDLDICNSCYHLEGTWQDDLSMELAD

Homology

[Close]

BLAST of Carg16443 vs. NCBI nr
Match: XP_022938111.1 (transcription factor PIF3-like isoform X1 [Cucurbita moschata] >XP_022938112.1 transcription factor PIF3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 569/592 (96.11%), Postives = 569/592 (96.11%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60
           MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK
Sbjct: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60

Query: 61  GTDSVIRDVLGHD-XXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG 120
           GTDSVIRDVLGHD XXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG
Sbjct: 61  GTDSVIRDVLGHDXXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG 120

Query: 121 DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH 180
           DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH
Sbjct: 121 DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH 180

Query: 181 NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKT 240
           NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKT
Sbjct: 181 NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKT 240

Query: 241 RGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE 300
           RGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE
Sbjct: 241 RGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE 300

Query: 301 AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES 360
           AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES
Sbjct: 301 AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES 360

Query: 361 NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK---------- 420
           NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK          
Sbjct: 361 NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 420

Query: 421 ------------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG 480
                       IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG
Sbjct: 421 IEYLKTLQLQVQIMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG 480

Query: 481 GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR 540
           GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR
Sbjct: 481 GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR 540

Query: 541 GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 570
           GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ
Sbjct: 541 GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 592

[Close]

BLAST of Carg16443 vs. NCBI nr
Match: XP_022969617.1 (transcription factor PIF3-like isoform X1 [Cucurbita maxima] >XP_022969618.1 transcription factor PIF3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1050.4 bits (2715), Expect = 2.2e-303
Identity = 541/591 (91.54%), Postives = 555/591 (93.91%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60
           MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK
Sbjct: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60

Query: 61  GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDGD 120
           GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNS+SKQVDGD
Sbjct: 61  GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSSSKQVDGD 120

Query: 121 AQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARHN 180
           AQLNHLHGARLE GN+SK+SSMDVSSARARSCTNQLHSSASQQSQISLPH SSSSTARHN
Sbjct: 121 AQLNHLHGARLEDGNISKLSSMDVSSARARSCTNQLHSSASQQSQISLPHRSSSSTARHN 180

Query: 181 SSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTR 240
           SSNIMNFSHFLRPAVLKSNDQNRDVTK VG SSMRCVGS+DKNCSAGNTQPYESSFFKTR
Sbjct: 181 SSNIMNFSHFLRPAVLKSNDQNRDVTKAVGLSSMRCVGSMDKNCSAGNTQPYESSFFKTR 240

Query: 241 GSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEA 300
           GSIRNESKSCCENAVVPSID+SNPS VKAPETLEVVEQPEVACLGDSAKNDD PEPCLEA
Sbjct: 241 GSIRNESKSCCENAVVPSIDDSNPSDVKAPETLEVVEQPEVACLGDSAKNDDRPEPCLEA 300

Query: 301 GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESN 360
           GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTV+RKRKCHD EDSEWHSDDVEEESN
Sbjct: 301 GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVLRKRKCHDNEDSEWHSDDVEEESN 360

Query: 361 DVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK----------- 420
           D+ RATP RGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK           
Sbjct: 361 DMKRATPARGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEGI 420

Query: 421 -----------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGG 480
                      IMSMGAGLFMPPMMFPGG+PPMNAPHIYSPMGVGIGMG+GIAMPDMNGG
Sbjct: 421 EYLKTLQLQVQIMSMGAGLFMPPMMFPGGMPPMNAPHIYSPMGVGIGMGFGIAMPDMNGG 480

Query: 481 SPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFRG 540
           SPGYPMAQMPH+QGTHFPSPSIPAQT+MHGMPGSNFHVLG PGQGLP+SMP GPIAPF G
Sbjct: 481 SPGYPMAQMPHLQGTHFPSPSIPAQTIMHGMPGSNFHVLGFPGQGLPVSMPRGPIAPFHG 540

Query: 541 GPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 570
           GPFMTNSSVAVAPVESF LAAACSSKDS PKMN+PTVRNGGNDPLIT+PRQ
Sbjct: 541 GPFMTNSSVAVAPVESFSLAAACSSKDSPPKMNSPTVRNGGNDPLITAPRQ 591

[Close]

BLAST of Carg16443 vs. NCBI nr
Match: XP_022938113.1 (transcription factor PIF3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1021.1 bits (2639), Expect = 1.5e-294
Identity = 541/592 (91.39%), Postives = 541/592 (91.39%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60
           MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK
Sbjct: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60

Query: 61  GTDSVIRDVLGHD-XXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG 120
           GTDSVIRDVLGHD XXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG
Sbjct: 61  GTDSVIRDVLGHDXXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG 120

Query: 121 DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH 180
           DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH
Sbjct: 121 DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH 180

Query: 181 NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKT 240
           NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCS              
Sbjct: 181 NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCS-------------- 240

Query: 241 RGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE 300
                         AVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE
Sbjct: 241 --------------AVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE 300

Query: 301 AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES 360
           AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES
Sbjct: 301 AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES 360

Query: 361 NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK---------- 420
           NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK          
Sbjct: 361 NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 420

Query: 421 ------------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG 480
                       IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG
Sbjct: 421 IEYLKTLQLQVQIMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG 480

Query: 481 GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR 540
           GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR
Sbjct: 481 GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR 540

Query: 541 GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 570
           GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ
Sbjct: 541 GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 564

[Close]

BLAST of Carg16443 vs. NCBI nr
Match: XP_022969619.1 (transcription factor PIF3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 978.0 bits (2527), Expect = 1.4e-281
Identity = 513/591 (86.80%), Postives = 527/591 (89.17%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60
           MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK
Sbjct: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK 60

Query: 61  GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDGD 120
           GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNS+SKQVDGD
Sbjct: 61  GTDSVIRDVLGHDXXXXXXMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSSSKQVDGD 120

Query: 121 AQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARHN 180
           AQLNHLHGARLE GN+SK+SSMDVSSARARSCTNQLHSSASQQSQISLPH SSSSTARHN
Sbjct: 121 AQLNHLHGARLEDGNISKLSSMDVSSARARSCTNQLHSSASQQSQISLPHRSSSSTARHN 180

Query: 181 SSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTR 240
           SSNIMNFSHFLRPAVLKSNDQNRDVTK VG SSMRCVGS+DKNCS               
Sbjct: 181 SSNIMNFSHFLRPAVLKSNDQNRDVTKAVGLSSMRCVGSMDKNCS--------------- 240

Query: 241 GSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEA 300
                        AVVPSID+SNPS VKAPETLEVVEQPEVACLGDSAKNDD PEPCLEA
Sbjct: 241 -------------AVVPSIDDSNPSDVKAPETLEVVEQPEVACLGDSAKNDDRPEPCLEA 300

Query: 301 GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESN 360
           GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTV+RKRKCHD EDSEWHSDDVEEESN
Sbjct: 301 GASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVLRKRKCHDNEDSEWHSDDVEEESN 360

Query: 361 DVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK----------- 420
           D+ RATP RGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK           
Sbjct: 361 DMKRATPARGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEGI 420

Query: 421 -----------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGG 480
                      IMSMGAGLFMPPMMFPGG+PPMNAPHIYSPMGVGIGMG+GIAMPDMNGG
Sbjct: 421 EYLKTLQLQVQIMSMGAGLFMPPMMFPGGMPPMNAPHIYSPMGVGIGMGFGIAMPDMNGG 480

Query: 481 SPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFRG 540
           SPGYPMAQMPH+QGTHFPSPSIPAQT+MHGMPGSNFHVLG PGQGLP+SMP GPIAPF G
Sbjct: 481 SPGYPMAQMPHLQGTHFPSPSIPAQTIMHGMPGSNFHVLGFPGQGLPVSMPRGPIAPFHG 540

Query: 541 GPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQ 570
           GPFMTNSSVAVAPVESF LAAACSSKDS PKMN+PTVRNGGNDPLIT+PRQ
Sbjct: 541 GPFMTNSSVAVAPVESFSLAAACSSKDSPPKMNSPTVRNGGNDPLITAPRQ 563

[Close]

BLAST of Carg16443 vs. NCBI nr
Match: XP_022156402.1 (transcription factor PIF3-like [Momordica charantia] >XP_022156403.1 transcription factor PIF3-like [Momordica charantia])

HSP 1 Score: 690.6 bits (1781), Expect = 4.5e-195
Identity = 410/693 (59.16%), Postives = 461/693 (66.52%), Query Frame = 0


Query: 1   MPLSELYRVARG-------KNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNS- 60
           MPLSELYRVARG       KNN VSAD SLNPENDV+ELVW+NGQI LQGQSS+ RKNS 
Sbjct: 1   MPLSELYRVARGKLDSTQDKNNTVSADLSLNPENDVFELVWDNGQISLQGQSSRTRKNSN 60

Query: 61  -------CVPFHSPK------------------GTDSVIRDVLG----------HDXXXX 120
                  C+P HSP+                    DSV+RDV+G          HD    
Sbjct: 61  SNTLQSQCLPSHSPRDRHRDTGHFSNARMGKFGAIDSVVRDVIGTAPSPDVELTHD-DDD 120

Query: 121 XXMVPWLNYPLD-----EHSSEFLLELSGVTVNDPLSRNSTS---------KQVDGDAQL 180
             MVPWLNYPLD     E+SS+FL ELSGVTVND  SRNS +          QV+ D  +
Sbjct: 121 DDMVPWLNYPLDGHLQHEYSSDFLPELSGVTVNDLPSRNSVASSIGRGSGGNQVNRDTHV 180

Query: 181 NHLHGARLEGGNVSKVSSMDVSSAR-ARSCTNQLHSSASQQSQISLPHL----------- 240
           N L GA LE GN+SK+SS+D S+ R  RS TNQLHSSASQQSQ S+PHL           
Sbjct: 181 NSLRGASLEDGNISKLSSLDASTDRPQRSSTNQLHSSASQQSQTSIPHLRTKSASGRENT 240

Query: 241 ---------------------SSSSTARH--------NSSNIMNFSHFLRP-AVLKSNDQ 300
                                SSSST R         NSSN +NFSHFLRP A+LKSN Q
Sbjct: 241 TDKLVQDSLMGQSPQVPLVTSSSSSTMRQKLDPNPPSNSSNFINFSHFLRPAALLKSNLQ 300

Query: 301 NRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSIDN 360
           N  VT  VG SSMR   S+DK+CSA ++QP E+S   TRGS+R ES S C+NAVVPSID+
Sbjct: 301 NHGVTGTVGLSSMR---SMDKDCSAASSQPPEASLIATRGSLRKESNSFCKNAVVPSIDD 360

Query: 361 SNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASV 420
           +NPS  K PE L+ V+QPEVACLGDS+KNDDHP+ CLE GA+ G  D EK  ESVIAASV
Sbjct: 361 NNPSDAKPPEQLQAVKQPEVACLGDSSKNDDHPKQCLEVGATTGFPDGEKAAESVIAASV 420

Query: 421 CSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAEV 480
           CSR S++ A DD T  RKRKCHDTEDSEWHSDDVEEE NDV RA P RG GSKRSRAAEV
Sbjct: 421 CSRNSVEGASDDPTRNRKRKCHDTEDSEWHSDDVEEECNDVKRANPARGTGSKRSRAAEV 480

Query: 481 HNLSERRRRDRINEKMRALQELIPNCNK----------------------IMSMGAGLFM 540
           HNLSERRRRDRINEKMRALQELIPNCNK                      IMSMGAGLFM
Sbjct: 481 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFM 540

Query: 541 PPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPS 570
           PPMMFPGG+ PMNAPHIYSPMG           PDMNGGSPGYP+ Q+PH+QGTHFPSPS
Sbjct: 541 PPMMFPGGMQPMNAPHIYSPMGXXXXXXXXXXXPDMNGGSPGYPIVQVPHIQGTHFPSPS 600

[Close]

BLAST of Carg16443 vs. TAIR10
Match: AT1G09530.1 (phytochrome interacting factor 3)

HSP 1 Score: 109.4 bits (272), Expect = 7.8e-24
Identity = 153/544 (28.12%), Postives = 227/544 (41.73%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARK------NSCV 60
           MPL EL+R+ + K       +   P ++V ELVWENGQI  Q QSS++R       NS  
Sbjct: 1   MPLFELFRLTKAKLESAQDRNPSPPVDEVVELVWENGQISTQSQSSRSRNIPPPQANSSR 60

Query: 61  PFHSPKGTDSVIRD-------VLGHDXXXXXXMVPWLNY--PLDEHSSEFLLELSG-VTV 120
                 G+ + + D        L          VPWLN+   LD + S+FL ++S  VTV
Sbjct: 61  AREIGNGSKTTMVDEIPMSVPSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTV 120

Query: 121 ND---PLSRNSTS-----KQVDGDAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQL 180
           N+    ++ N T+     ++ DG+        ++  G     +   D    RAR   +Q 
Sbjct: 121 NEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGSD----RARDLPSQ- 180

Query: 181 HSSASQQSQISLPHLSSSSTARHNSSNIMNFSHFLRPAVL-KSNDQNRDVTKGVGFSSMR 240
            ++  + +Q   P ++S      N  +++NFSHFLRPA   K+ + N   TK     S  
Sbjct: 181 QTNPDRFTQTQEPLITS------NKPSLVNFSHFLRPATFAKTTNNNLHDTKEKSPQS-- 240

Query: 241 CVGSVDKNCSAGNTQPYESSFFKTR--GSIRNESKSCCENAVVPSIDNSNPSGVKAPETL 300
                              + F+TR  G+  +E K   E     S+ ++ P         
Sbjct: 241 -----------------PPNVFQTRVLGAKDSEDKVLNE-----SVASATP--------- 300

Query: 301 EVVEQPEVACL--GDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRAL 360
              +  + ACL   DS + D   E                  ++V+ +SV S  S+    
Sbjct: 301 ---KDNQKACLISEDSCRKDQESE------------------KAVVCSSVGSGNSLDGPS 360

Query: 361 DDTTVVRKRKCHDTEDSEWHS--DDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRR 420
           +  ++  KRK  + +D + HS                          R+AEVHNLSERRR
Sbjct: 361 ESPSLSLKRKHSNIQDIDCHSXXXXXXXXXXXXXXXXXXXXXXXXXXRSAEVHNLSERRR 420

Query: 421 RDRINEKMRALQELIPNCNK----------------------IMSMGAGLFMPP-MMFPG 480
           RDRINEKMRALQELIPNCNK                      IMSM +G ++PP +MFP 
Sbjct: 421 RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPP 470

Query: 481 GLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPAQTVM 491
           G+   + P             Y + +PD++ G      + + H  G  F    +  Q V 
Sbjct: 481 GMG--HYPAAXXXXXXXXXXXYAMGLPDLSRGG-----SSVNH--GPQFQVSGMQQQPVA 470

[Close]

BLAST of Carg16443 vs. TAIR10
Match: AT2G43010.1 (phytochrome interacting factor 4)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-11
Identity = 62/172 (36.05%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 241 GSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDD---HPEPC 300
           G    E +      V PS   SNPS              +V+   D +KN +   +P   
Sbjct: 147 GIRETEMEQYSVTTVGPSHCGSNPS----------QNDLDVSMSHDRSKNIEEKLNPNAS 206

Query: 301 LEAGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEE 360
             +G S G S  + + E  +A+  C  T  KR          ++ + T++S   SD +  
Sbjct: 207 SSSGGSSGCSFGKDIKE--MASGRCITTDRKR----------KRINHTDESVSLSDAIGN 266

Query: 361 ESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK 410
           +SN        R   ++RSRAAEVHNLSERRRRDRINE+M+ALQELIP+C+K
Sbjct: 267 KSNQ-------RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK 289

[Close]

BLAST of Carg16443 vs. TAIR10
Match: AT2G46970.1 (phytochrome interacting factor 3-like 1)

HSP 1 Score: 63.5 bits (153), Expect = 4.9e-10
Identity = 94/318 (29.56%), Postives = 127/318 (39.94%), Query Frame = 0


Query: 244 RNESKS--CCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAG 303
           RN SKS  C E++ +  +        K P+ +EV   P              P+   E  
Sbjct: 120 RNVSKSNKCVESSTLIDV------SAKGPKNVEVTTAP--------------PD---EQS 179

Query: 304 ASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESND 363
           A+ G S      E   A+S        R L   ++ RK    + E+S + S++   ES+D
Sbjct: 180 AAVGRS-----TELYFASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSXXESDD 239

Query: 364 VNRATPVRGNG--SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK---------- 423
                  R     +KR R+ EVH L ER+RRD  N+KMRALQ+L+PNC K          
Sbjct: 240 AKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEA 299

Query: 424 ------------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG 483
                       +MSMG GL  PP M P G         YSPMG+G+ MG   A P    
Sbjct: 300 IKYMRTLQLQVQMMSMGNGLIRPPTMLPMG--------HYSPMGLGMHMG-AAATP---- 359

Query: 484 GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR 536
                P     +VQ T FP         M+  P      L  P   +P +    P+    
Sbjct: 360 --TSIPQFLPMNVQATGFPG--------MNNAPPQMLSFLNHPSGLIPNTPIFSPLENC- 385

[Close]

BLAST of Carg16443 vs. TAIR10
Match: AT2G20180.2 (phytochrome interacting factor 3-like 5)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-09
Identity = 51/116 (43.97%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 381 VHNLSERRRRDRINEKMRALQELIPNCNK----------------------IMSMGAGLF 440
           VHNLSER+RRDRINE+M+ALQELIP CNK                      +MSMG G  
Sbjct: 288 VHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCG-- 347

Query: 441 MPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTH 475
           M PMM+PG    M  PH    M +G+GM   I  P      P    AQ P    TH
Sbjct: 348 MMPMMYPGMQQYM--PH----MAMGMGMNQPIPPPSFM-PFPNMLAAQRPLPTQTH 394

[Close]

BLAST of Carg16443 vs. TAIR10
Match: AT3G59060.2 (phytochrome interacting factor 3-like 6)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-09
Identity = 66/206 (32.04%), Postives = 94/206 (45.63%), Query Frame = 0


Query: 211 FSSMRCVGSVDKNCSAGNTQPYESSFF---KTRGSIRNESKSCCENAVVPSIDNSNPSGV 270
           FSS+  +G  +K  +   T  +E+      K R S+     S C         ++  + +
Sbjct: 112 FSSIDHLGGPEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHC--------GSNQSTNI 171

Query: 271 KAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSM 330
               TL V        + D +KN +       +G S G S      E+V   SV      
Sbjct: 172 HQATTLPV-------SMSDRSKNVEE-RLDTSSGGSSGCSYGRNNKETVSGTSV------ 231

Query: 331 KRALDDTTVVRKRK-CHDTEDSEWHSDDVEEESND---VNRATPVRGNGSKRSRAAEVHN 390
                  T+ RKRK   D +       D+   S D   +   +  R   ++RSRAAEVHN
Sbjct: 232 -------TIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHN 288

Query: 391 LSERRRRDRINEKMRALQELIPNCNK 410
           LSERRRRDRINE+M+ALQELIP+C++
Sbjct: 292 LSERRRRDRINERMKALQELIPHCSR 288

[Close]

BLAST of Carg16443 vs. Swiss-Prot
Match: sp|Q0JNI9|PIL15_ORYSJ (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL15 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 5.5e-27
Identity = 123/375 (32.80%), Postives = 171/375 (45.60%), Query Frame = 0


Query: 184 IMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTRGSI 243
           +MNFS F RPAVL          +    S+ R  G+ +K  +   +   ES+  +T    
Sbjct: 212 VMNFSLFSRPAVL---------ARATLESAQRTQGTDNKASNVTASNRVESTVVQTASGP 271

Query: 244 RNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGAS 303
           R+      + A               P+  E+      A     A N  H      AG +
Sbjct: 272 RSAPAFADQRA-----------AAWPPQPKEMPFASTAAAPMAPAVNLHHEMGRDRAGRT 331

Query: 304 KGL--SDSEKVVESVIA-ASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESN 363
             +  +++ K  E+ +A +SVCS        D+    +KRKC    +     DD  ++  
Sbjct: 332 MPVHKTEARKAPEATVATSSVCSGNG--AGSDELWRQQKRKCQAQAECSASQDDDLDDEP 391

Query: 364 DVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKI---------- 423
            V R +  R   +KRSR AEVHNLSERRRRDRINEKMRALQELIPNCNKI          
Sbjct: 392 GVLRKSGTR--STKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 451

Query: 424 ------------MSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGG 483
                       MSMG GL +PPM+ P  +  +  P +     +G+G+GYG+ + DM+  
Sbjct: 452 EYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHLQIPPMAHFPHLGMGLGYGMGVFDMSNT 511

Query: 484 SPGYPMAQMPHVQGTHFPSPSIPAQTVMH-GMPG-SNFHVLGLPGQGLPLSMPHGPIAPF 532
                  QMP + G HFP P IP  +    G+PG S   + G+PGQ +P S    P    
Sbjct: 512 G----ALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVP---- 551

[Close]

BLAST of Carg16443 vs. Swiss-Prot
Match: sp|O80536|PIF3_ARATH (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-22
Identity = 153/544 (28.12%), Postives = 227/544 (41.73%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARK------NSCV 60
           MPL EL+R+ + K       +   P ++V ELVWENGQI  Q QSS++R       NS  
Sbjct: 1   MPLFELFRLTKAKLESAQDRNPSPPVDEVVELVWENGQISTQSQSSRSRNIPPPQANSSR 60

Query: 61  PFHSPKGTDSVIRD-------VLGHDXXXXXXMVPWLNY--PLDEHSSEFLLELSG-VTV 120
                 G+ + + D        L          VPWLN+   LD + S+FL ++S  VTV
Sbjct: 61  AREIGNGSKTTMVDEIPMSVPSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTV 120

Query: 121 ND---PLSRNSTS-----KQVDGDAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQL 180
           N+    ++ N T+     ++ DG+        ++  G     +   D    RAR   +Q 
Sbjct: 121 NEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGSD----RARDLPSQ- 180

Query: 181 HSSASQQSQISLPHLSSSSTARHNSSNIMNFSHFLRPAVL-KSNDQNRDVTKGVGFSSMR 240
            ++  + +Q   P ++S      N  +++NFSHFLRPA   K+ + N   TK     S  
Sbjct: 181 QTNPDRFTQTQEPLITS------NKPSLVNFSHFLRPATFAKTTNNNLHDTKEKSPQS-- 240

Query: 241 CVGSVDKNCSAGNTQPYESSFFKTR--GSIRNESKSCCENAVVPSIDNSNPSGVKAPETL 300
                              + F+TR  G+  +E K   E     S+ ++ P         
Sbjct: 241 -----------------PPNVFQTRVLGAKDSEDKVLNE-----SVASATP--------- 300

Query: 301 EVVEQPEVACL--GDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRAL 360
              +  + ACL   DS + D   E                  ++V+ +SV S  S+    
Sbjct: 301 ---KDNQKACLISEDSCRKDQESE------------------KAVVCSSVGSGNSLDGPS 360

Query: 361 DDTTVVRKRKCHDTEDSEWHS--DDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRR 420
           +  ++  KRK  + +D + HS                          R+AEVHNLSERRR
Sbjct: 361 ESPSLSLKRKHSNIQDIDCHSXXXXXXXXXXXXXXXXXXXXXXXXXXRSAEVHNLSERRR 420

Query: 421 RDRINEKMRALQELIPNCNK----------------------IMSMGAGLFMPP-MMFPG 480
           RDRINEKMRALQELIPNCNK                      IMSM +G ++PP +MFP 
Sbjct: 421 RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPP 470

Query: 481 GLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPAQTVM 491
           G+   + P             Y + +PD++ G      + + H  G  F    +  Q V 
Sbjct: 481 GMG--HYPAAXXXXXXXXXXXYAMGLPDLSRGG-----SSVNH--GPQFQVSGMQQQPVA 470

[Close]

BLAST of Carg16443 vs. Swiss-Prot
Match: sp|Q6AT90|APG_ORYSJ (Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.4e-14
Identity = 53/107 (49.53%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 340 RKCHDTEDSEWHSD----DVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINE 399
           R  H+ + +EW +     D+++E   V+R +  R   SKRSR AEVHNLSERRRRDRINE
Sbjct: 296 RDSHNNQSAEWSASQDELDLDDELAGVHRRSAAR--SSKRSRTAEVHNLSERRRRDRINE 355

Query: 400 KMRALQELIPNCNKI----------------------MSMGAGLFMP 421
           KMRALQELIPNCNKI                      MSMG G+F+P
Sbjct: 356 KMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGMFVP 400

[Close]

BLAST of Carg16443 vs. Swiss-Prot
Match: sp|Q10CH5|PIL13_ORYSJ (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL13 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.5e-13
Identity = 71/184 (38.59%), Postives = 82/184 (44.57%), Query Frame = 0


Query: 369 RGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK------------------- 428
           R    +R+RAAEVHNLSERRRRDRINEKMRALQELIP+CNK                   
Sbjct: 212 RYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQM 271

Query: 429 ---IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQ 488
              IM M  G  M PMMFPG      A     PM VG+       MP   G S    +  
Sbjct: 272 QVQIMWMTTG--MAPMMFPG------AHQFMPPMAVGMN---SACMPAAQGLSHMSRLPY 331

Query: 489 MPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHG--PIAPFRGGPFMTN 529
           M H    H P  S PA   M+    +    + L     P   P G   + P   GP+ + 
Sbjct: 332 MNHSMPNHIPLNSSPAMNPMN--VANQMQNIQLREASNPFLHPDGWQTVPPQVSGPYASG 382

[Close]

BLAST of Carg16443 vs. Swiss-Prot
Match: sp|Q8W2F3|PIF4_ARATH (Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-10
Identity = 62/172 (36.05%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 241 GSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDD---HPEPC 300
           G    E +      V PS   SNPS              +V+   D +KN +   +P   
Sbjct: 147 GIRETEMEQYSVTTVGPSHCGSNPS----------QNDLDVSMSHDRSKNIEEKLNPNAS 206

Query: 301 LEAGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEE 360
             +G S G S  + + E  +A+  C  T  KR          ++ + T++S   SD +  
Sbjct: 207 SSSGGSSGCSFGKDIKE--MASGRCITTDRKR----------KRINHTDESVSLSDAIGN 266

Query: 361 ESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK 410
           +SN        R   ++RSRAAEVHNLSERRRRDRINE+M+ALQELIP+C+K
Sbjct: 267 KSNQ-------RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK 289

[Close]

BLAST of Carg16443 vs. TrEMBL
Match: tr|A0A1S3BWE9|A0A1S3BWE9_CUCME (transcription factor PIF3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493865 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.4e-184
Identity = 392/687 (57.06%), Postives = 446/687 (64.92%), Query Frame = 0


Query: 1   MPLSELYRVARG-------KNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNS- 60
           MPLSELYRVARG       KNNMV++D S+NPENDV+ELVWENGQILLQGQS++ RKNS 
Sbjct: 1   MPLSELYRVARGKLDSTQDKNNMVASDLSMNPENDVFELVWENGQILLQGQSNRTRKNSN 60

Query: 61  -------CVPFHSPK------------------GTDSVIRDV----------LGHDXXXX 120
                  C+P HSP+                    DSV+RDV          L HD    
Sbjct: 61  LNTSQAQCLPTHSPRDRDRDVGYFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHD--DD 120

Query: 121 XXMVPWLNYPLDEH-----SSEFLLELSGVTVNDPLSRNSTSKQV-----------DGDA 180
             MVPWL+YPLD H     SS+FL ELSGVTVND  SRNS +  +           + D 
Sbjct: 121 DDMVPWLSYPLDGHLQHDYSSDFLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDM 180

Query: 181 QLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHL---------- 240
            LN +HGA LE GN+SK+SS+DVS+ARARS TNQLHSSASQQSQ S PHL          
Sbjct: 181 HLNSMHGANLEDGNISKLSSLDVSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGGTEN 240

Query: 241 ----------------------SSSSTAR--------HNSSNIMNFSHFLRP-AVLKSND 300
                                 SSSSTAR        +N+SNI+NFSHFLRP A+LKSN 
Sbjct: 241 TTGKILHDSLVGHSPQVPLIASSSSSTARQKLDPTPPNNASNIINFSHFLRPAALLKSNP 300

Query: 301 QNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSID 360
           QN  V    G    R + S+ KN SA N+QP ESS    +G IRNES S C+NAVVPSID
Sbjct: 301 QNHGVP---GTGGSRNLDSMVKNSSAANSQPRESSLIAIQGGIRNESNSGCKNAVVPSID 360

Query: 361 NSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAAS 420
             NPS  K PE  +  +QPE ACLGDSA +DD  + CLE GA+KG +DSEK VESVIAAS
Sbjct: 361 GKNPSDAKPPEQSQANKQPEAACLGDSADHDDRLKHCLEVGATKGYADSEKAVESVIAAS 420

Query: 421 VCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAE 480
           +CSR S++ A DD  + RKRKCHDTEDSEWHSDDVEE+ NDV R T  RG GSKRSRAAE
Sbjct: 421 LCSRNSVEGASDDPPLNRKRKCHDTEDSEWHSDDVEEDCNDVKRVTSGRGTGSKRSRAAE 480

Query: 481 VHNLSERRRRDRINEKMRALQELIPNCNK----------------------IMSMGAGLF 540
           VHNLSERRRRDRINEKMRALQELIPNCNK                      IMSMGAGLF
Sbjct: 481 VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLF 540

Query: 541 MPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSP 566
           MPPMMFPG               V  GMG+GI MPDMNG   G PM  +PH+QG HFP P
Sbjct: 541 MPPMMFPGAXXXXXXXXXXXXXXV--GMGFGIGMPDMNG---GIPMVPVPHMQGMHFPGP 600

[Close]

BLAST of Carg16443 vs. TrEMBL
Match: tr|A0A0A0LH16|A0A0A0LH16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035330 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.5e-181
Identity = 381/665 (57.29%), Postives = 436/665 (65.56%), Query Frame = 0


Query: 16  MVSADSSLNPENDVYELVWENGQILLQGQSSKARKNS--------CVPFHSPK------- 75
           MV++D S+NPENDV+ELVWENGQILLQGQS++ RKNS        C+P HSP+       
Sbjct: 1   MVASDLSMNPENDVFELVWENGQILLQGQSNRPRKNSNLNTSQAQCLPSHSPRDRDRDVG 60

Query: 76  -----------GTDSVIRDV----------LGHDXXXXXXMVPWLNYPLDEH-----SSE 135
                        DSV+RDV          L HD      MVPWL+YPLD H     SS+
Sbjct: 61  YFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHD--DDDDMVPWLSYPLDGHLQHDYSSD 120

Query: 136 FLLELSGVTVNDPLSRNSTSKQV-----------DGDAQLNHLHGARLEGGNVSKVSSMD 195
           FL ELSGVTVND  SRNS +  +           + D  LN +HGA LE GN+SK+SS+D
Sbjct: 121 FLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDMHLNSMHGANLEDGNISKLSSLD 180

Query: 196 VSSARARSCTNQLHSSASQQSQISLPHL-------------------------------- 255
           VS+ARARS TNQLHSSASQQSQ S PHL                                
Sbjct: 181 VSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGETENTTGKMLHDSLVGHSPQVPLIAS 240

Query: 256 SSSSTAR--------HNSSNIMNFSHFLRPA-VLKSNDQNRDVTKGVGFSSMRCVGSVDK 315
           SSSS A+        +NSSNI+NFSHFLRPA +LKSN Q   V    G    R + S+  
Sbjct: 241 SSSSIAKQKLDPTPPNNSSNIINFSHFLRPASLLKSNPQKHGVP---GTGGSRNLDSMVN 300

Query: 316 NCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVA 375
           N SA N+QP+ESS    +G IRNES S C+NAVVP+ID  +PS  K  E  +  +QPE A
Sbjct: 301 NSSAANSQPHESSLIAIQGGIRNESNSGCKNAVVPTIDGKSPSDAKPLEQSQTNKQPEAA 360

Query: 376 CLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKC 435
           CLGDSA +DD  +   E GA+KGL+DSEK VESV AAS+CSR S++ A DD    RKRKC
Sbjct: 361 CLGDSADHDDRLKHRFEVGATKGLADSEKAVESVFAASLCSRNSVEGASDDPPHNRKRKC 420

Query: 436 HDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQE 495
           HDTEDSEWHSDDVEE+ NDV R T  RG GSKRSRAAEVHNLSERRRRDRINEKMRALQE
Sbjct: 421 HDTEDSEWHSDDVEEDCNDVKRVTSARGAGSKRSRAAEVHNLSERRRRDRINEKMRALQE 480

Query: 496 LIPNCNK----------------------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPM 555
           LIPNCNK                      IMSMGAGLFMPPMMFPG + PMN PHIY PM
Sbjct: 481 LIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFMPPMMFPGAMAPMNTPHIYPPM 540

Query: 556 GVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLP 566
             GIGMGYGI MPDMNG   G PM Q+PH+QG HFP PS+PAQTVMHG+P SNF VLGLP
Sbjct: 541 --GIGMGYGIGMPDMNG---GIPMVQVPHMQGMHFPGPSMPAQTVMHGLPSSNFQVLGLP 600

[Close]

BLAST of Carg16443 vs. TrEMBL
Match: tr|A0A1S3BW30|A0A1S3BW30_CUCME (transcription factor PIF3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493865 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.3e-177
Identity = 377/665 (56.69%), Postives = 431/665 (64.81%), Query Frame = 0


Query: 16  MVSADSSLNPENDVYELVWENGQILLQGQSSKARKNS--------CVPFHSPK------- 75
           MV++D S+NPENDV+ELVWENGQILLQGQS++ RKNS        C+P HSP+       
Sbjct: 1   MVASDLSMNPENDVFELVWENGQILLQGQSNRTRKNSNLNTSQAQCLPTHSPRDRDRDVG 60

Query: 76  -----------GTDSVIRDV----------LGHDXXXXXXMVPWLNYPLDEH-----SSE 135
                        DSV+RDV          L HD      MVPWL+YPLD H     SS+
Sbjct: 61  YFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHD--DDDDMVPWLSYPLDGHLQHDYSSD 120

Query: 136 FLLELSGVTVNDPLSRNSTSKQV-----------DGDAQLNHLHGARLEGGNVSKVSSMD 195
           FL ELSGVTVND  SRNS +  +           + D  LN +HGA LE GN+SK+SS+D
Sbjct: 121 FLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDMHLNSMHGANLEDGNISKLSSLD 180

Query: 196 VSSARARSCTNQLHSSASQQSQISLPHL-------------------------------- 255
           VS+ARARS TNQLHSSASQQSQ S PHL                                
Sbjct: 181 VSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGGTENTTGKILHDSLVGHSPQVPLIAS 240

Query: 256 SSSSTAR--------HNSSNIMNFSHFLRP-AVLKSNDQNRDVTKGVGFSSMRCVGSVDK 315
           SSSSTAR        +N+SNI+NFSHFLRP A+LKSN QN  V    G    R + S+ K
Sbjct: 241 SSSSTARQKLDPTPPNNASNIINFSHFLRPAALLKSNPQNHGVP---GTGGSRNLDSMVK 300

Query: 316 NCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVA 375
           N SA N+QP ESS    +G IRNES S C+NAVVPSID  NPS  K PE  +  +QPE A
Sbjct: 301 NSSAANSQPRESSLIAIQGGIRNESNSGCKNAVVPSIDGKNPSDAKPPEQSQANKQPEAA 360

Query: 376 CLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKC 435
           CLGDSA +DD  + CLE GA+KG +DSEK VESVIAAS+CSR S++ A DD  + RKRKC
Sbjct: 361 CLGDSADHDDRLKHCLEVGATKGYADSEKAVESVIAASLCSRNSVEGASDDPPLNRKRKC 420

Query: 436 HDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQE 495
           HDTEDSEWHSDDVEE+ NDV R T  RG GSKRSRAAEVHNLSERRRRDRINEKMRALQE
Sbjct: 421 HDTEDSEWHSDDVEEDCNDVKRVTSGRGTGSKRSRAAEVHNLSERRRRDRINEKMRALQE 480

Query: 496 LIPNCNK----------------------IMSMGAGLFMPPMMFPGGLPPMNAPHIYSPM 555
           LIPNCNK                      IMSMGAGLFMPPMMFPG              
Sbjct: 481 LIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLFMPPMMFPGAXXXXXXXXXXXXX 540

Query: 556 GVGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLP 566
            V  GMG+GI MPDMNG   G PM  +PH+QG HFP PS+PAQTVMHG+P SNF VLGLP
Sbjct: 541 XV--GMGFGIGMPDMNG---GIPMVPVPHMQGMHFPGPSMPAQTVMHGLPSSNFQVLGLP 600

[Close]

BLAST of Carg16443 vs. TrEMBL
Match: tr|A0A2P4IAP8|A0A2P4IAP8_QUESU (Transcription factor pif3 OS=Quercus suber OX=58331 GN=CFP56_72903 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 6.4e-105
Identity = 290/704 (41.19%), Postives = 361/704 (51.28%), Query Frame = 0


Query: 1   MPLSELYRVARG-------KNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARK--- 60
           MPLSELYR+A+G       KN   S D S  PEND++ELVWENGQIL QGQSS+ARK   
Sbjct: 1   MPLSELYRMAKGKLESTREKNTTCSNDLSFLPENDLFELVWENGQILKQGQSSRARKSPT 60

Query: 61  -----NSCVPFHSPK------------------GTDSVIRDVL------GHDXXXXXXMV 120
                + C+P ++ K                  G +SV+ ++         D      M+
Sbjct: 61  RNNFQSHCLPSYTSKIRDKDIGNGSNSKMGKFGGMESVLNEIPMSVPSDEMDLSQDDGMM 120

Query: 121 PWLNYPLD-----EHSSEFLLELSGVTVND--------PLSRNSTSKQVDGDAQLNHLHG 180
           PWLNYP+D     E+ SEFL ELSGVTVN+         + + S+   V  D   N ++ 
Sbjct: 121 PWLNYPIDDSLQHEYCSEFLPELSGVTVNELSNQNNLASIDKRSSCNLVYRDCHTNSVND 180

Query: 181 -ARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSS----------SSTA 240
              L  GNVSKVSS+ V  A  R  T  L+ S+SQQ Q S   L S          SS  
Sbjct: 181 VVSLGQGNVSKVSSVGVGEA-TRPRTTPLYPSSSQQCQTSFSSLRSRVTDGAGNNTSSVM 240

Query: 241 RH------------------------------NSSNIMNFSHFLRPAVL-KSNDQNRDVT 300
            H                              N+SN+MNFSHF RPA L K+N QN  + 
Sbjct: 241 HHAVCGDSTLVASAAAGFPTIKMQKKDQMSSNNNSNLMNFSHFSRPAALVKANLQNMGLM 300

Query: 301 KGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKTRGSIRNESKSCCENAV------VPSID 360
            G   SSM  + S DK  +A    P ES+  K+   ++ ES S C+          PS  
Sbjct: 301 AGSDLSSMERITSKDKGSAASIKLPPESTHIKSISGLQKESSSHCQPLAAPAPVPAPSKV 360

Query: 361 NSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIA-A 420
           +  PS  K  E     +Q E  C  ++++ND+         A+KGL D EK  E V+A +
Sbjct: 361 DLKPSEDKPVEETVASKQSEAVCPDEASRNDNISNQVFSESATKGLPDGEKTTEPVVASS 420

Query: 421 SVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEESNDVNRATPVR-GNGSKRSRA 480
           SVCS  S++RA DD T   KRK  DTE+SE HS+D+EEES    +A   R G GSKRSRA
Sbjct: 421 SVCSGNSVERASDDLTHNLKRKFRDTEESECHSEDIEEESIGAKKAASGRAGTGSKRSRA 480

Query: 481 AEVHNLSERRRRDRINEKMRALQELIPNCNK----------------------IMSMGAG 540
           AEVHNLSERRRRDRINEKMRALQELIPNCNK                      IMSMGAG
Sbjct: 481 AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAG 540

Query: 541 LFMPPMMFPGGLPPMNAPHI--YSPMG--------VGIGMGYGIAMPDMNGGSPGYPMAQ 566
            +MPPM+ P G+  M+APH+  +SPMG                    DMN G  GYPM Q
Sbjct: 541 FYMPPMILPTGIQHMSAPHMAHFSPMGXXXXXXXXXXXXXXXXXXXXDMNVGPSGYPMIQ 600

[Close]

BLAST of Carg16443 vs. TrEMBL
Match: tr|A0A0U2RX57|A0A0U2RX57_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus OX=151439 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 8.7e-102
Identity = 274/680 (40.29%), Postives = 353/680 (51.91%), Query Frame = 0


Query: 1   MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARK----NSCVPF 60
           MPLSELYR+A      V +     P ND  ELVWENGQI++QGQSS+ RK    N+ +P 
Sbjct: 1   MPLSELYRMA----GRVDSSQDFEPVNDFVELVWENGQIMMQGQSSRTRKSPTCNNSLPS 60

Query: 61  HSPKGTD------------------SVIRDV----------LGHDXXXXXXMVPWLNYPL 120
           ++PK  D                  SV+ ++          L  D      M+PWLNY +
Sbjct: 61  YNPKNRDKDVGNGNIAKTGKFGSVESVLDEIPLSVPSSEMGLSED----DEMLPWLNYSI 120

Query: 121 D-----EHSSEFLLELSGVTVND--------PLSRNSTSKQVDGDAQLNHLH-GARLEGG 180
           D     E+  EFL +LS VT N+         + + S+S QV  D+  N  H GA LE  
Sbjct: 121 DEPLHHEYCHEFLPQLSTVTANEISSNSNLASMDKRSSSSQVYRDSNTNSAHEGAYLEQR 180

Query: 181 NVSKVSSMD-VSSARARSCTNQLHSSASQQSQISLPHLSS---------SSTARH----- 240
           N  KV+S+D    +R R+ T+QL+  +SQQSQ   P   S         + +A H     
Sbjct: 181 NAPKVTSIDGADVSRPRTGTSQLYPLSSQQSQSLFPSFRSRVSDIVGDNTGSATHPTVCK 240

Query: 241 --------------------------NSSNIMNFSHFLRPAVL-KSNDQNRDVTKGVGFS 300
                                     N+S+++NFSHF RPA L KSN Q+     G G S
Sbjct: 241 NSTQVSSAGVFPGIKMQRQDPVMPSNNNSSVVNFSHFSRPAALVKSNLQSIGAVAGSGLS 300

Query: 301 SMRCVGSVDKNCSAGNTQPYESSFFKTRGSIRNESKSCCENAVVPSIDNSNPSGVKAPET 360
           SM  +G+  K  +A +  P E++   +   +  ES S C++    S     P+  K  E 
Sbjct: 301 SMERIGTKGKVSAATSNNPPETTLIDSSSGLPKESNSQCQHITATSNVELKPTEAKPLEE 360

Query: 361 LEVVEQPEVACLGDSAKNDDHPEPCLEAGASKGLSDSEKVVESVIAASVCSRTSMKRALD 420
               +Q E AC  D++KND +        A++ L D EK +E V+A+SVCS  S++RA D
Sbjct: 361 SCAAKQSEAACQEDASKNDTNTNHIPCESANRVLRDGEKTLEPVVASSVCSGNSVERASD 420

Query: 421 DTTVVRKRKCHDTEDSEWHSDDVEEESNDVNRATPVRGNGSKRSRAAEVHNLSERRRRDR 480
           D T   KRK  DT++SE HSDD EEES  V +    RG GSKRSRAAEVHNLSERRRRDR
Sbjct: 421 DPTHALKRKSRDTDESECHSDDAEEESVGVKKIAHARGMGSKRSRAAEVHNLSERRRRDR 480

Query: 481 INEKMRALQELIPNCNK----------------------IMSMGAGLFMPPMMFPGGLPP 540
           INEKMRALQELIPNCNK                      IMSMGAGL+MPPMMFP G+  
Sbjct: 481 INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPAGMQH 540

Query: 541 MNAPHI--YSPMG------VGIGMGYGIAMPDMNGGSPGYPMAQMPHVQGTHFPSPSIPA 558
           M+AP +  +SPMG                 PDMNGGS GYPM Q+P +QG HFP+  +  
Sbjct: 541 MHAPRMAHFSPMGXXXXXXXXXXXXXXXXXPDMNGGSSGYPMLQVPPMQGAHFPNSPMAG 600

The following BLAST results are available for this feature:

BLAST of Carg16443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938111.1	0.0e+00	96.11	transcription factor PIF3-like isoform X1 [Cucurbita moschata] >XP_022938112.1 t...	[more]
XP_022969617.1	2.2e-303	91.54	transcription factor PIF3-like isoform X1 [Cucurbita maxima] >XP_022969618.1 tra...	[more]
XP_022938113.1	1.5e-294	91.39	transcription factor PIF3-like isoform X2 [Cucurbita moschata]	[more]
XP_022969619.1	1.4e-281	86.80	transcription factor PIF3-like isoform X2 [Cucurbita maxima]	[more]
XP_022156402.1	4.5e-195	59.16	transcription factor PIF3-like [Momordica charantia] >XP_022156403.1 transcripti...	[more]

BLAST of Carg16443 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09530.1	7.8e-24	28.13	phytochrome interacting factor 3	[more]
AT2G43010.1	2.6e-11	36.05	phytochrome interacting factor 4	[more]
AT2G46970.1	4.9e-10	29.56	phytochrome interacting factor 3-like 1	[more]
AT2G20180.2	1.9e-09	43.97	phytochrome interacting factor 3-like 5	[more]
AT3G59060.2	1.9e-09	32.04	phytochrome interacting factor 3-like 6	[more]

BLAST of Carg16443 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0JNI9\|PIL15_ORYSJ	5.5e-27	32.80	Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 OS=Oryza sativa subs...	[more]
sp\|O80536\|PIF3_ARATH	1.4e-22	28.13	Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1	[more]
sp\|Q6AT90\|APG_ORYSJ	2.4e-14	49.53	Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV...	[more]
sp\|Q10CH5\|PIL13_ORYSJ	3.5e-13	38.59	Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subs...	[more]
sp\|Q8W2F3\|PIF4_ARATH	4.7e-10	36.05	Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1	[more]

BLAST of Carg16443 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWE9\|A0A1S3BWE9_CUCME	1.4e-184	57.06	transcription factor PIF3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493865 PE=...	[more]
tr\|A0A0A0LH16\|A0A0A0LH16_CUCSA	2.5e-181	57.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035330 PE=4 SV=1	[more]
tr\|A0A1S3BW30\|A0A1S3BW30_CUCME	1.3e-177	56.69	transcription factor PIF3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493865 PE=...	[more]
tr\|A0A2P4IAP8\|A0A2P4IAP8_QUESU	6.4e-105	41.19	Transcription factor pif3 OS=Quercus suber OX=58331 GN=CFP56_72903 PE=4 SV=1	[more]
tr\|A0A0U2RX57\|A0A0U2RX57_9ROSA	8.7e-102	40.29	BHLH transcription factor OS=Prunus pseudocerasus OX=151439 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR036638	HLH_DNA-bd_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16443-RA	Carg16443-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 372..417 e-value: 2.5E-11 score: 45.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 374..412
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 381..408 e-value: 2.5E-7 score: 30.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 377..427 score: 9.921
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 373..413 e-value: 1.58286E-7 score: 47.9791
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 543..563
None	No IPR available	PANTHER	PTHR12565:SF284	TRANSCRIPTION FACTOR HFR1-RELATED	coord: 70..410
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 70..410

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16443	Cla019998	Watermelon (97103) v1	carwmB0913
Carg16443	Csa2G035330	Cucumber (Chinese Long) v2	carcuB0929
Carg16443	MELO3C004148	Melon (DHL92) v3.5.1	carmeB0900
Carg16443	ClCG02G014630	Watermelon (Charleston Gray)	carwcgB0889
Carg16443	CSPI02G05020	Wild cucumber (PI 183967)	carcpiB0952
Carg16443	Cucsa.090320	Cucumber (Gy14) v1	carcgyB1029
Carg16443	CmaCh05G010530	Cucurbita maxima (Rimu)	carcmaB1255
Carg16443	CmaCh12G008670	Cucurbita maxima (Rimu)	carcmaB1254
Carg16443	CmoCh05G010630	Cucurbita moschata (Rifu)	carcmoB1224
Carg16443	CmoCh12G008730	Cucurbita moschata (Rifu)	carcmoB1223
Carg16443	Lsi11G006670	Bottle gourd (USVL1VR-Ls)	carlsiB829
Carg16443	Cp4.1LG11g08670	Cucurbita pepo (Zucchini)	carcpeB1260
Carg16443	Cp4.1LG07g07240	Cucurbita pepo (Zucchini)	carcpeB1263
Carg16443	CsGy2G005180	Cucumber (Gy14) v2	carcgybB0902
Carg16443	MELO3C031303.2	Melon (DHL92) v3.6.1	carmedB0908
Carg16443	CsaV3_2G007370	Cucumber (Chinese Long) v3	carcucB0952
Carg16443	Cla97C02G040390	Watermelon (97103) v2	carwmbB0955
Carg16443	Bhi06G001236	Wax gourd	carwgoB1055

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16443	Carg11981	Silver-seed gourd	carcarB523

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16443	Melon (DHL92) v3.5.1	carmeB0899
Carg16443	Watermelon (97103) v1	carwmB0912