Carg16438 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16438
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein like
Location	Cucurbita_argyrosperma_scaffold_130 : 514460 .. 525025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTTGTTCTTCCGCGAGACTCTAAGCCGCTATTGTTCGTCTCCAGTTCAGCTTTCATCTTGTTCGTTTCAATTCCAACGATTTCTTGTTTCCTTTTCCAATTCACTTCCACCCCCAGATCCGCCTACTATATATTATTACTCCTCAATCTTCACCAAAGGTGATGATTCTCTATCGATTTCTTAATCTCTGAAAAATTTCAATTATGGCGTTTCGTACGAGTTCTCATTCTATTCGTTTTTGGATTCTGTTAGTCTTTTCAATGCCATGCGGAATGAACTGAACGTTCAGCTGCCGAAGTCGTTTGACGATTTCTTTTTGGGGTCTGCCTCCAGTTAATTGTTCATTTGGTGGCAGACTAGGGTTTCTGTCAATCTTCTCCTTGTTTTCGAGATCAGGCTTCTGAAGCAGCAACAGGCAAGGGGAGATTTCCTTTTTTATTTTTATTTTTCTATTTTTTTTCCTGTTTGATGTGTCTTGTTCTTGGTAAATCATCTTCCTCACATACATTACTTTAATTTTGATCCTGTTGATAATTTCCGCATACACCTTGGTGTTCATTTTGCAGTATGGTGGATGCGGTTCAAATCTACTACAGTATTATTGCGTTTTTTTGCACGGTTGGAGCCATTGCTCTGGCGGTCCTTCATATTTATCGGCATCTTTTGAACTATACGGAGCCTACTTATCAGAGATATATCGTGCGAATCATCTTTATGGTCCCGGTTAGTTTTCCTTCCCCACGTTTCATTTTTAGTTCAGGAAAGATCCTTTTGCTTTGTTTGGTTGTGGGTTCGTTAGAAGGCTTCCTTATTGACATGTTCATGGTTGAACACCACGTATCTCTGATTTATGCACCACATTATGTTCCTTTATATCCTAGATGATATGCATGTTTCGAACTTGATGATTTAATGACAATTTATATGTATGTGTTCATCTTTGTTCTGTTTTCTTGTTGTGTTACCTTGTATGAATTCTTGGACTTTGTATATTATTGCTTCGAGGAGGAAGCCTCAAGTTGCATCTTGTTGGAAAATCGCAAGAGTCTTAACTTTTGACACAGAGAAAGTCGAGTAAAAGTTTCAAGTGTCGGGGGGCAGTTTATATAGCTTTTCTCTCTAGATGTTTTAGCCACCATTCTTACGTACTTTCTTTCTTACCTCATTCCATATAAGCAGCATAAATCTCGTAGAAATTCCAGAGAAATTTCAATTGGGAAGGTTCTAAGATTGAAAGAGGATACAATTTAGCTGAGGATTAAATCTCTTTGACCCTGGTTGAAGGATGTCCAGGCATTGGAAATATTTGAAAAGAAAATGATGCTCTTTTCATATGGAGATTCCCAGAGAAGAAGAATCTCTATGGCACTTAATTATAAAGAGAAATTATGGATCTAATTTCAATGGTTGTTGTACTGACAATAGCAATTTTTTTAGCGATAAGAAATGATTATTGAAGTCAGCATTCTTTTTGTTGTTATTATTGATAATGGCATTACATTCATCGAGGAAAATGCAAGAATTACAATAAAAGCTACACCAAAAACCATGGCAATATAAGGGGCAACCACAGCCTAAAGTGAGAGAAAATTACAGAAAGGAAACAAGTTGCAGCCAAAAATCTCAAGGAATATATTGAAATGAGCATCAGAACGAACATCGTCCCACACTTTCTCCTTCCCTTGAAATGGCCATTTGTTTTTATCCAGCCAAATGTGTCACTACAAGCATGAGTTTCTTCTTCATCCTAGATTGGCATACATTATGAGAGTTTAAAAAATGGGAAGGAAATAGAGAGGGATAACACTCAAAATAGTCTAAATAAGGGTGAATCTTTTTCTTTTAAAGAAAGATGTCTTCTAAGAAGAACCATCTTTCTAAATCACTGATCATCATTGGATTCCGGAAGCAACTTGTTTAGGATTATCACCCAAAAGCAAACCTAAGTAGGGAGAAAGGAGTTCAATCTCTAGTTGTATTCTTTATACAAGATTGGTTTTCTTTTTTTCTGTTTTTTTTCCTTCTTCTTCTGTGTTGCCCCATTTACTGAAAACTTATTATTTTCTTTTCTATAAGAAAAGATTTTTCATCCATGGGTACTGCAACCTACAATGTTACTGAACTTATTATGTACTGATGATACCATCTCGCCAGACTTCTTCCTAGGGGACACCTTCACAGTTCCTAAAACTCTTACCTTTAACTTCAAACAAAAGTCAAAGATCAATAGAATGTGCAAGGTTCAAAGAAAATTGTTTGATGTGGAAAGGAATAAAAGAGTTGGTTTTGTTCTGAATTATTAGGTGATGTTGTGTAAAAATTCAGTGAGATGTTTTTGTAACTTAGAAAGCTCAGGAGCTTTCCTTCTAACTCCAAACAAGAGTTAGGATCAATAGAATGTGCAATCTGTAAAGAAAATTATTTGTTGCGGAAATGAACATAAGAGTTGGTTTTGTTTTGAATGATTAGCTGATGTTGCTTCAAAAGTCAGTGAGATGTTTTGTAGCTTAGATAGCTCAGGAGCTCTCTTGTAAATTCCTTGCCTTCTGTCTTATCAACAATCCTCAATTCTCAAAAGAACCACTCTTATCTGATTTGGAAAGGAAAAACCCACAAGTAAAAAATTTCCCTTCATTCCTAGTTCCTTGAGTATTAATATACTGGATTAACAAGCGGAAACCTCGATGGCCTTTCTTCTATTAGTGTTTCAAATGCAAGATAGGTGGTGAGGACATGACAACTTGTTTATTCACCATCCGTTTGTGTATGGTTTGGTGGACTCAACTCTTAAAGATATTCAATGCTTTTAGTGCTCCCCCATAAAGTTAGAGTTCTATGTTGAAATGCCTTCAAAGCCTATTCGTCACGTTTTGTGAATCAATAGATTATTATTATTATTATTTTTTAGGGATTAGAAACCAAATTTTCAGTGAGAAACATTTAGGGATATACAAGAGCATTAAAAAAGACAACCCAATCCTGTAAAAGGGTCTCCAATCCAAAAGAGTAACACTTAATGAATAATTACAAAAGGCCTTAGAGGTCACCACTCACAAGAAGGTATTAAATCTGGTATTTTCCCAAAGAACATCTCAAGATCGATCAACCCTTAAAGATTCTGCTATTTCTTTCCCCATGGCGATCTCAGAAAGAAAAAAAGCCTGTCAAAGAACTTTCCATTTATCCTTAAAGGGAGGGAACAACACGATATCTGTTGGATCTTCAATCCCTATTACGAACAAACGGAATCCCAAAGGTGTCCTAAAACTTGTCCAAATCAAGTGAACAGATTGGCAACTCTACAATAAATCATCAATATCCTCAGAATCTCCTATACACACAAATGCACCACTGAGGATTGAAACACGAAGAGCATCTTTGAAATGCGATCCAAACTTGACTTTCCCATGCAAAACTTGCATGGCAAATATTTCGATAGAAAATAATTTGAAATTTAGGGTTTAGGGTATCTTTGGGAGGGAACCGGTAGAAAATAATTTGAAATTTAAGAAGGGAAGACTTCCTTTTTACGGAAATAATTAGTTCATTGCCTCAAAATAGAGTGCTTTTCACATAGATTTTTGTTACTTCTCTTATTTCCTTCTAAACACCAATTGGAGGGTGTGCTTACAAGGCCTTGGTTGTAGGATTGGGTTCCCCCTCCCATCTAAACTTTGATCCCTTTTTTGGGGAATCTATCAACCCCTGCTACCCCTGCAATAAGTTTTCCTGGATTACTACATGCCGAAAGAGGTGTTGGAGCTCAAAATAGCTGCTTGAAACTTGCCATGGGTCTTTTGGAGTTTTCTCAAAAGGCATCGTAAGTTTGTAAAGGGTTGGGATGAAGTTGCTCTATTAAACCCTTGGTGAAGAAACTGGGATTTACTTTAAAGAATGGAGCGTTGAAAACCATTTATAAATTGTGTTCTAAGATTACAAGTGGTTAAACTGGGACAACAAAAATACTTCTAACTAACTACCACTTTTGTTTGCGTAATTTGCTACTTGTTCATCTTTCCTTTTCACACCATCTTTCCTCCAAACTTTTTACATTTACGTTTTTGCTTCGTTATATGTACTTTCATAGTAAAACCTTTGTGTTTATTCTTTCTTTCTTTCTTTTTCTTGTTTGTCTTCCTTTTTGCATTATGTTATTAGTAAATCCTAAAATTGCACCCTTGCATCACAGGTATATGCACTGATGTCCTTCTTGTCTCTTGTTATACCTTCGAGTTCAATCTATTTTAATTCAATTCGAGAAGTGTAAGTAGTCCTTGCTTAATCAATTCTTTATGGAATTTTGAAGTTTGTCTGTTTCTACTTTGTTGCAAATCCACTCATTTACTTTTCTTGTGGCTTTTATTTCTACTGTGAGGTCTATTTGTGGAAGATTACTGAGGCCTACCAAGAATAATATGAACTTTTTTTTGGGGTGGGCATGGACTTTGTAAAATGAGAAGAGTACAATTTTTTTTCTTCACGATCGAATCATGTATTTAACAGCTTCTTGGTCATTCCTTTTTCTTGTATTGTTGGATTTCTTTAATGGCCATCTAAAACATGCTTCTTGAATGCTCCTTTCTCCCAAAAGTTTGTGTAGAGAAGTTATATGCAAATAAACAAATTTAATAAGAATGAAATGCGGTCATTTCAGTTCTCATGCCTTCATTTAAACAGTAAAAACAATTTCGTATCATTGTCCTTTCGGTTATGGTTATGGATCAAATATCTAATCATTAGTTTTGATTTTTTTTAGCTATGAAGCTTGGGTCATTTATAATTTTCTGTCATTGTGTCTGGCATGGGTTGGTGGTCCTGGAGCTGTTGTAATAAGTTTAAGTGGTCGTGTACTGAAGCCATCATGGGGCTTGATGACGTGTTGTCTTCCTCCTGTACAACTAGATGGGTAAGTTCGCAAAAGTTCAATTTTTTTGGATTGATGTAATGATTGAGTTATTAATGGCAGCATATACTAGTCAGCATTGAATTATGTTAACTCACTTGAATATAATAGATGTACACCATACATGTAGGCATAGTTAGTGCATGCTTCATTTTTTTTCATGGCATTAATGCCTTTTAACGGAGAGTGTCCATGAAAAGGATGCTGCTGAGAGATGCCTATTTTAATGTAATTTAAAACACTGTGCTCCACTTAGCTACTTGTATTAGGATTTTCTGCTAAATGTATTTTCAACAAATCCTACTCTTTTTGCAATGATTCCCCCCTCTACTATTTCCTAAGCTTTTCATATGTTTCCAGTATTGGATCTCCCTTATGAATTCTCTTGCTACTACAAAATGCTTTTTCTATGGATCTCCTAAACTCGTGAGAAAAAAAGAGGGAGGGAGAGAGATCCTCAAACCATCCTTTCTCTTGCGTCTCAATTCTTCGAACATTGTTGGAGTTCTGGACAATTTAGGGAGAGAAACGAGTTTTTTAAGAGTGAATAAAGATCTCTCTCCCTCCAACAATGTTCGAAGAATTGACTCTTAAAAGAAACAAGTTTTTTTTAGAGTTCAATTCTTCGAACATTGTTGGAGTTCTGGGATATTATTCTTTTCTTTCCATGTATTATGCGAGTTATATACCCCTCATTCTGTCACCTCGTTTGGTTAATGTAATAAACTAAATTAAAAATAGTGGATTTTTTATGATCTTTTGAGAACTGTACGTGTTTTGTGGAATTGGTGAAAATAAATAAAATGCTCAAGAATACGAACTCCATTAGGAGAGAAAAGAACAAAAGCCCAGCCAAACTAAAAACACAGCCAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAGAAGAGAATATAGGCTCTCCAAGAACAAAAGGACCCAAGCATTGAATTTCTCAGAAATGCTCAGGGTATTGTTCCATCTCTAGACTCCAAGAGTGAAGACATTTTAGGCATATGTTGGTATAATCTTAGCCATTTTGCAAATGCGCAGGGTATTGTTATCTTTCGGTGGAAATGTTCTGGGTATTGTTCCATCTTATGTAACTATGAAGTTTTTGCTGGGCTATTTAGAGCAGTAAGAAACTAGCCCATATTTAGGCAAATATTATGGATGGGAAGTTATTTATGTGAAGAACGTAAAATGATGTTAAAGGTTGCTCCAGTATATATTTATCTGAAAGTTAATAATTCCTGTTTTGTAGATTAACATCTTAAAACTGTCTATAGTTGTATTAATTCTGGAAACTGTTTGAAAAGATATCTTTGGTTCGTTGTTTTATTCATTCTTCATATAGTTTAGAAATAAACACAGTTATATGTGAGAAAAAAAATAAGATCAATATGTTTAATTTAAGTTTTACTTAAAAAAATAATTAGTATTGGGCAAAGCACCAGCCAAAGGGCAAATTAAGTAAAGATGAAGGTAATATTCCCCATTTATATTAATTCTTTGTCTAGTAGCCATGGGTTTTTTATGACACCCATTAATCCTTTGATTATCTTGCTGAATGTTTGGATTTGAATGAATAATTTCTGGTTTTAATAATACCCAAGTACATTCAAAAGTTGGTTCAATTGAATTTCTGTTCTCCAACTAATGATTTTGAAATTATCTCTATACTTTCCTCCATTTTCACCAAAAGAATCAGTTATTGCTTCTCAGTTCTAGATCCATAGCCACATTGATAAATCTCTTAGGAGACTTTTTCTTGTGATCCACCTAGAATTCCCAAACTAGAGGGCTCAAAACCTTGAGAGCGGACACAATTTAGTCGAGAAAGTAGGCATCTACACACGTTGAACTGTATGTTTCTTGTTACCTGGATGTGCTTGCTATTCTTCTATTCATCTAAAGTAAGCGTCTTTCCCCAGTTGTTCTTTCGATCATGTTAGACAACCTTACGAGCAACAGCAAGTTGAGTTTTAGCAAGTCTAATATAAACTCCTTTTGATCTGTGAAGTATCTTGTCATATTCAATACCTACTAATCTCCAATCGTTTATTGAAAACATTTACTCTGTAAATGTAGCGCCTTTCTGCAGCCATCATGCATTGACCAAGTAATCATTGGGGCTAGTGAAGAAGTAAATGGACTTATAGGGAATGAGTTGAAACCAAGATGGTTACGTACATAGGATTTAAATTCCTACAAGTTTCTTTGACATGGACGCTGAGATTAGCTGAGATGTGTGAAAGTTGGTTTAGACACCTGTGGATATGAAAAAAAGTATCCTTTTCCTCAAATATGTGGATAACCTTTCCTTAGTCCACACCTTTCTAGTATATTTTGCTAGGAATGACATATTCATAATCACCGAACACCATGTTGGATCTCTTTTGGACCTTTTTTATCGACATCTATGCTAACATATGACAAAAATAATCAATCAAATCAGCATTGTTCGATTATTATAGATTACTAATAGATATAGAGAGAGTGAGAAGAATGAATTATAAATATTAAATAGCTCACCCTTTGAATTCAAGATGGTCAAAGCTCAAGAAATTCTTGAATTTTTACGCAAATAGCTTTTGGCATCTCTGAGCAGTTAACAATGTGCAAGGAAAACCATCATCTTAGAATGTGTTCCAAGCGAGTATGAGAGAGTGAATTGAGGTTTAAAATAGTGGAAGAGATAGATAGAGACCATGGAGGGCAGAGGGGCAAAGAGTGAAACGAGTCAGAGAGAGGCAGAAAAGAGTGAGATAGAGAGGCAGAGAGAGAGCTTATGAGAGGAACAGAGAGAGAGAGTGAGATGGAGAGATGACTAATAGAGCATCCAATGGATAGAAGGGCAGAGGGAGAATTGTTGGAGAGTGAGAGGAAGAGAGATTGAGAATGAAACGAAGGGATAGATAGGGAGGGTTGGAGGGACTACCGAGAGAAATAGAGAGACCTTACTTAGTTGTTGCATGCTTTGATGAGAGAGAGAGAGAACAAACTAGACATTTCATGAATGGGGTTCAGTTGAGTAGGTTGGGTAAGGAGACTAACATAAGTGCCCGAATCTGTTGCCTCATGTCTACACATTATTAGCACAAGTGCGCTTCACAAGGGCACCATGCCTACCTAAGGGAAGGTGCTGTTCATGCTATTGCTTCTCCTTCTTGCTTTCATTTGGAGAAATGAACCTAGTTGTATTGTTTGCTGAGCTTTCTTTGTATTGTTAATTGCTTTCTGCTGTCCATTTGCAGAGGGCTTTTAATTATTTGTAATTATAATCTATTTCAAATAGTACAGAATATTTAAGTAAGCTTCTCAATGTTTGTGATGTTTAGTAGTAATTTCCTCTAAAACCTAACCAGGATAACCCTTTATCTAATATCTAGTTATTGGGCATTATATCTTTCCTCACTTATCAGGAAAACAAAAGTATCAATCTGAAACTTCATCAGATAACCTTACGGGTTGCTTTCTATGCAGGCGTTTTATACGGAGGTGCAAGCAAGGCTGTTTGCAATTTGTCATTCTGAAGCCTATACTAGTTGCTGTTACACTTATTTTATATGCAAAAGGGAAGTATGAGGATGGAAATTTCAATCCAAAACAATCATACCTTTATCTCACCATCATCTATACTATGTCATACACAATGGCTCTTTATTCATTAGCATTGTTTTATGTGGCATGCAAAGACTTACTTCAACCATTTAACCCGGTCCCGAAGTTCATCATCATTAAGTCTGTTGTCTTCTTGACTTACTGGCAGGTGAGTGATCTTTAGGTTCTTTTTCTTTTTCAAATCACTTGCTTCTCTATATGGATGTTTCTTTCGTTAGTGTGTGTGGTGTGTGTGGCGTTGTGTTGATTCTTACAACATACTCAGAGGAAGGTTATAAATATGGTGGCTTTGAAATGTGAGTGTAATCTACTATGGGAAATAATGTGTTTTACAATTTAGTTTTAGAAAACTTATGGAATGAACGCAAGTTAGACTAGAGATAAAATGTGATGCTAATCTTCGTTACAACCACTCAAACATTGAGCGGTTACCCGGTATTATTCAGTAGGCTGGAGTGTGCGCGTTTTGTGGGGTCCTTGGGATAGAGGAACTATTTAATTTTTAGAGGGCTTAAGAGATTTTGTGAGATCCCATATCGGTTGGGGAGGAGAACGAAACACCCTCTATAAGGGTGTGGAAACCTCTCGCTAGCAGATGCGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGTGCTTGGGCTGTAGCAACGTTTGATCCCTAGGTAGATTCTACGTTTCTCTGACTTTTGTGGTAAAACTTTGTTGTAATTACTTGTTGGGTCTAATTTTACTGGATTGGAGGTCCTTTTTGTAGTTTGTCTTGCGGAGTTGTTCTTTGTATGACCTTGTATTCTTTCATTTTCGGTTTTCGTTAAAAAAAACATCCTGGGTAATGTACTTGTTTCTCAAATTATAGCTTAATTTATAGACCAAAACAACTAGTATGCGATCATCAAAATGTCTTTTTAGTTCAGAAATTGTTGTCACAACCTGAAGCATGTAGAATGAACATCAACTGATTCTATAATATAATCTCTTCCCTATGTAATTTGGTTTAGGGCGTCCTCGTTTTTCTTGCTGCAAAAACTCAATGGATCAAGAATGCTGAGGAGGCTGCTCAATTTCAAGATTTCCTCATATGCATTGAGATGCTTATAGCCGCTTTGGGCCATCTTTATGCATTCCCATACAAAGAATATGCAGGAGCTAACATTGGTGGTTCGCGTGGTTTCACCGGAAGTCTTGCACATGCCTTAAAGTTGAATGACTTTTACCACGATACAGTCCACCAAGTGAGCTTTATTTGATATAGTTTTCAAGTTTGAGATTGTTTTGCATCTCTTTGCTGGATTCTTCATTGCCCTCACCACTTTTCTCTTGCAGTTTGCACCAACTTATCACGATTACGTTCTTTACAACCATAGCGACGGTGACGAAGGAACGAGGAAGTACCGATCGCGCACCTTCGTGCCTACCGGCCCCGAAATGGACACTGTTAGAAGAAACAAACACATGTTTGCAAACAAGGTAGAGGACATTCCACTTTCCACAATCCCTCAGAATTCCTATACCGTTCTCGAACCAGCACATCCCGATGCAATGAAGTCATCTCTTCTCATGGATGCCTCTAACTCTTTATCCACACCGTACGATATGTCGCTTATCGACTTGGATATGTCGAGCTACCCCTCGAAAGTTCCTGCAGCAAATGAAACTGAAACGAGGTGACGAGAATTGTCGGACAGGTAGGAAAAAAACGATCGTGTGAGGAACTTAATACGCAAAGAAAGATATAATACAAATAGAGATTTTAGAGAGTATGTATGCACACTGGCATTGCGGCATAACAGAAAATTGTGTACAATGGCGTGTTCTTCAGTCCATGGTGATGTATATACATACAATACACGATTCTGATTTGTTATGAATTAGGATTTGATACACAATCATGCAATATAAATTCATTTTAATTACCATACTGTAATATGTGGAGGGAATAACCTTGATTTGAAGAATATTGGTGTAATTCCATTTCATAAGGGAAATTAACCTATTTAATA

mRNA sequence

TCCGTTGTTCTTCCGCGAGACTCTAAGCCGCTATTGTTCGTCTCCAGTTCAGCTTTCATCTTGTTCGTTTCAATTCCAACGATTTCTTGTTTCCTTTTCCAATTCACTTCCACCCCCAGATCCGCCTACTATATATTATTACTCCTCAATCTTCACCAAAGGTGATGATTCTCTATCGATTTCTTAATCTCTGAAAAATTTCAATTATGGCGTTTCGTACGAGTTCTCATTCTATTCGTTTTTGGATTCTGTTAGTCTTTTCAATGCCATGCGGAATGAACTGAACGTTCAGCTGCCGAAGTCGTTTGACGATTTCTTTTTGGGGTCTGCCTCCAGTTAATTGTTCATTTGGTGGCAGACTAGGGTTTCTGTCAATCTTCTCCTTGTTTTCGAGATCAGGCTTCTGAAGCAGCAACAGTATGGTGGATGCGGTTCAAATCTACTACAGTATTATTGCGTTTTTTTGCACGGTTGGAGCCATTGCTCTGGCGGTCCTTCATATTTATCGGCATCTTTTGAACTATACGGAGCCTACTTATCAGAGATATATCGTGCGAATCATCTTTATGGTCCCGGTATATGCACTGATGTCCTTCTTGTCTCTTGTTATACCTTCGAGTTCAATCTATTTTAATTCAATTCGAGAAGTGTAAGTAGTCCTTGCTTAATCAATTCTTTATGGAATTTTGAAGTTTGTCTGTTTCTACTTTGTTGCAAATCCACTCATTTACTTTTCTTGTGGCTTTTATTTCTACTGTGAGGTCTATTTGTGGAAGATTACTGAGGCCTACCAAGAATAATATGAACTTTTTTTTGGGGTGGGCATGGACTTTGTAAAATGAGAAGAGTACAATTTTTTTTCTTCACGATCGAATCATGTATTTAACAGCTTCTTGGTCATTCCTTTTTCTTGTATTGTTGGATTTCTTTAATGGCCATCTAAAACATGCTTCTTGAATGCTCCTTTCTCCCAAAAGTTTGTGTAGAGAAGTTATATGCAAATAAACAAATTTAATAAGAATGAAATGCGGTCATTTCAGTTCTCATGCCTTCATTTAAACAGTAAAAACAATTTCGTATCATTGTCCTTTCGGTTATGGTTATGGATCAAATATCTAATCATTAGTTTTGATTTTTTTTAGCTATGAAGCTTGGGTCATTTATAATTTTCTGTCATTGTGTCTGGCATGGGTTGGTGGTCCTGGAGCTGTTGTAATAAGTTTAAGTGGTCGTGTACTGAAGCCATCATGGGGCTTGATGACGTGTTGTCTTCCTCCTGTACAACTAGATGGGCGTTTTATACGGAGGTGCAAGCAAGGCTGTTTGCAATTTGTCATTCTGAAGCCTATACTAGTTGCTGTTACACTTATTTTATATGCAAAAGGGAAGTATGAGGATGGAAATTTCAATCCAAAACAATCATACCTTTATCTCACCATCATCTATACTATGTCATACACAATGGCTCTTTATTCATTAGCATTGTTTTATGTGGCATGCAAAGACTTACTTCAACCATTTAACCCGGTCCCGAAGTTCATCATCATTAAGTCTGTTGTCTTCTTGACTTACTGGCAGGGCGTCCTCGTTTTTCTTGCTGCAAAAACTCAATGGATCAAGAATGCTGAGGAGGCTGCTCAATTTCAAGATTTCCTCATATGCATTGAGATGCTTATAGCCGCTTTGGGCCATCTTTATGCATTCCCATACAAAGAATATGCAGGAGCTAACATTGGTGGTTCGCGTGGTTTCACCGGAAGTCTTGCACATGCCTTAAAGTTGAATGACTTTTACCACGATACAGTCCACCAATTTGCACCAACTTATCACGATTACGTTCTTTACAACCATAGCGACGGTGACGAAGGAACGAGGAAGTACCGATCGCGCACCTTCGTGCCTACCGGCCCCGAAATGGACACTGTTAGAAGAAACAAACACATGTTTGCAAACAAGGTAGAGGACATTCCACTTTCCACAATCCCTCAGAATTCCTATACCGTTCTCGAACCAGCACATCCCGATGCAATGAAGTCATCTCTTCTCATGGATGCCTCTAACTCTTTATCCACACCGTACGATATGTCGCTTATCGACTTGGATATGTCGAGCTACCCCTCGAAAGTTCCTGCAGCAAATGAAACTGAAACGAGGTGACGAGAATTGTCGGACAGGTAGGAAAAAAACGATCGTGTGAGGAACTTAATACGCAAAGAAAGATATAATACAAATAGAGATTTTAGAGAGTATGTATGCACACTGGCATTGCGGCATAACAGAAAATTGTGTACAATGGCGTGTTCTTCAGTCCATGGTGATGTATATACATACAATACACGATTCTGATTTGTTATGAATTAGGATTTGATACACAATCATGCAATATAAATTCATTTTAATTACCATACTGTAATATGTGGAGGGAATAACCTTGATTTGAAGAATATTGGTGTAATTCCATTTCATAAGGGAAATTAACCTATTTAATA

Coding sequence (CDS)

ATGACGTGTTGTCTTCCTCCTGTACAACTAGATGGGCGTTTTATACGGAGGTGCAAGCAAGGCTGTTTGCAATTTGTCATTCTGAAGCCTATACTAGTTGCTGTTACACTTATTTTATATGCAAAAGGGAAGTATGAGGATGGAAATTTCAATCCAAAACAATCATACCTTTATCTCACCATCATCTATACTATGTCATACACAATGGCTCTTTATTCATTAGCATTGTTTTATGTGGCATGCAAAGACTTACTTCAACCATTTAACCCGGTCCCGAAGTTCATCATCATTAAGTCTGTTGTCTTCTTGACTTACTGGCAGGGCGTCCTCGTTTTTCTTGCTGCAAAAACTCAATGGATCAAGAATGCTGAGGAGGCTGCTCAATTTCAAGATTTCCTCATATGCATTGAGATGCTTATAGCCGCTTTGGGCCATCTTTATGCATTCCCATACAAAGAATATGCAGGAGCTAACATTGGTGGTTCGCGTGGTTTCACCGGAAGTCTTGCACATGCCTTAAAGTTGAATGACTTTTACCACGATACAGTCCACCAATTTGCACCAACTTATCACGATTACGTTCTTTACAACCATAGCGACGGTGACGAAGGAACGAGGAAGTACCGATCGCGCACCTTCGTGCCTACCGGCCCCGAAATGGACACTGTTAGAAGAAACAAACACATGTTTGCAAACAAGGTAGAGGACATTCCACTTTCCACAATCCCTCAGAATTCCTATACCGTTCTCGAACCAGCACATCCCGATGCAATGAAGTCATCTCTTCTCATGGATGCCTCTAACTCTTTATCCACACCGTACGATATGTCGCTTATCGACTTGGATATGTCGAGCTACCCCTCGAAAGTTCCTGCAGCAAATGAAACTGAAACGAGGTGA

Protein sequence

MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIKNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLSTIPQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAANETETR

Homology

[Close]

BLAST of Carg16438 vs. NCBI nr
Match: XP_022937992.1 (transmembrane protein 184B-like [Cucurbita moschata] >XP_022969621.1 transmembrane protein 184B-like [Cucurbita maxima] >XP_023537772.1 transmembrane protein 184B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605.1 bits (1559), Expect = 1.3e-169
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI
Sbjct: 176 IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH
Sbjct: 236 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 355

Query: 241 TIPQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAANETETR 300
           TIPQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAANETETR
Sbjct: 356 TIPQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAANETETR 414

[Close]

BLAST of Carg16438 vs. NCBI nr
Match: XP_004144735.1 (PREDICTED: transmembrane protein 184A [Cucumis sativus] >XP_011648889.1 PREDICTED: transmembrane protein 184A [Cucumis sativus])

HSP 1 Score: 547.7 bits (1410), Expect = 2.4e-152
Identity = 274/305 (89.84%), Postives = 288/305 (94.43%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPLALDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+I
Sbjct: 176 IIYTISYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAE+AAQFQDF+ICIEMLIAALGHLYAFPYKEYAGANIGGSRG TGSLAHA+KLNDFYH
Sbjct: 236 KNAEQAAQFQDFIICIEMLIAALGHLYAFPYKEYAGANIGGSRGLTGSLAHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMF NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFGNKLDDIQLS 355

Query: 241 TIPQNSYT------VLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAAN 300
           TI  +S +      VLEP + DAMKSSLL+DASNSLSTPYDMSLIDLDMSSYPSKV AA+
Sbjct: 356 TISSSSSSTPNHPEVLEPTNSDAMKSSLLLDASNSLSTPYDMSLIDLDMSSYPSKVAAAD 415

[Close]

BLAST of Carg16438 vs. NCBI nr
Match: XP_022999694.1 (transmembrane protein 184A-like [Cucurbita maxima] >XP_022999695.1 transmembrane protein 184A-like [Cucurbita maxima])

HSP 1 Score: 545.0 bits (1403), Expect = 1.5e-151
Identity = 271/306 (88.56%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPLPLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+I
Sbjct: 176 IIYTLSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           K+AEEAAQFQ+F+ICIEMLIAALGHLYAFPYKEYAGANIGGS G TGSLAHA+KLNDFYH
Sbjct: 236 KSAEEAAQFQNFIICIEMLIAALGHLYAFPYKEYAGANIGGSHGLTGSLAHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMD VRRNKHMF NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDAVRRNKHMFGNKIDDIQLS 355

Query: 241 TI-------PQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 300
           TI       P +S   LEPAH DAMKSSLLMDA+NSLSTP+DMSLIDLDMSSYPSKV AA
Sbjct: 356 TISSSSSSTPNDSELALEPAHSDAMKSSLLMDAANSLSTPFDMSLIDLDMSSYPSKVAAA 415

[Close]

BLAST of Carg16438 vs. NCBI nr
Match: XP_008452971.1 (PREDICTED: transmembrane protein 184A-like [Cucumis melo] >XP_016902321.1 PREDICTED: transmembrane protein 184A-like [Cucumis melo])

HSP 1 Score: 543.9 bits (1400), Expect = 3.4e-151
Identity = 271/305 (88.85%), Postives = 286/305 (93.77%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPLALDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+I
Sbjct: 176 IIYTISYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAE+AAQFQDF+ICIEMLIAALGHLYAFPYKEYAGANIGGSRG TGSLAHA+KLNDFYH
Sbjct: 236 KNAEQAAQFQDFIICIEMLIAALGHLYAFPYKEYAGANIGGSRGLTGSLAHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMF NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFGNKIDDIQLS 355

Query: 241 TIPQNSYT------VLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAAN 300
           TI  +S +      VLEP + D MKSSLL+DASNSLSTPYDMSLIDLD+SSYPSKV AA+
Sbjct: 356 TISSSSSSTPNHSEVLEPTNSDVMKSSLLLDASNSLSTPYDMSLIDLDLSSYPSKVAAAD 415

[Close]

BLAST of Carg16438 vs. NCBI nr
Match: XP_023545279.1 (transmembrane protein 184A-like [Cucurbita pepo subsp. pepo] >XP_023545280.1 transmembrane protein 184A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.5 bits (1399), Expect = 4.5e-151
Identity = 270/306 (88.24%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPLPLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+I
Sbjct: 176 IIYTLSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           K+AEEAAQFQ+F+ICIEMLIAALGHLYAFPYKEYAGANIGGS G TGSLAHA+KLNDFYH
Sbjct: 236 KSAEEAAQFQNFIICIEMLIAALGHLYAFPYKEYAGANIGGSHGLTGSLAHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMD VRRNKH+F NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDAVRRNKHVFGNKIDDIQLS 355

Query: 241 TI-------PQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 300
           TI       P +S   LEPAH DAMKSSLLMDA+NSLSTP+DMSLIDLDMSSYPSKV AA
Sbjct: 356 TISSSSSSTPNDSELALEPAHSDAMKSSLLMDAANSLSTPFDMSLIDLDMSSYPSKVAAA 415

[Close]

BLAST of Carg16438 vs. TAIR10
Match: AT3G05940.1 (Protein of unknown function (DUF300))

HSP 1 Score: 474.9 bits (1221), Expect = 3.6e-134
Identity = 230/301 (76.41%), Postives = 268/301 (89.04%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCC+PP+ LDGRFIRRCKQGCLQFVILKPILVAVTL+LYAKGKY+DGNF+P QSYLYLT
Sbjct: 116 MTCCIPPLPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYT+ALY+L LFYVACKDLLQPFNPVPKF+IIKSVVFLTYWQGVLVFL AK+ +I
Sbjct: 176 IIYTISYTVALYALVLFYVACKDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLFAKSGFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           ++ EEAA FQ+F+IC+EMLIAA  H YAFPYKEYA AN+GG+R F+GSLAHAL LNDFYH
Sbjct: 236 RDEEEAALFQNFIICVEMLIAAAAHFYAFPYKEYAEANVGGARSFSGSLAHALMLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSD-GDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPL 240
           DTVHQFAPTYHDYVLYNH+D G+EGTRKYR+RTFVPTG EMD VR+NKHMF NK++ + +
Sbjct: 296 DTVHQFAPTYHDYVLYNHNDGGEEGTRKYRARTFVPTGQEMDAVRKNKHMFGNKIDGVSV 355

Query: 241 S------TIPQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 295
           S      + P+ S    +PA P++MKSSLL+DAS+S+ST YDMSLID+D+SSYPSKVP+A
Sbjct: 356 SSQSSETSTPKTSGVTYDPARPESMKSSLLVDASDSVSTMYDMSLIDIDISSYPSKVPSA 415

[Close]

BLAST of Carg16438 vs. TAIR10
Match: AT5G26740.1 (Protein of unknown function (DUF300))

HSP 1 Score: 456.8 bits (1174), Expect = 1.0e-128
Identity = 224/307 (72.96%), Postives = 264/307 (85.99%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCC PP+ LDGRFIRRCKQGCLQFVILKPILVAVTL+LYAKGKY+DGNFNP Q+YLYLT
Sbjct: 116 MTCCFPPLTLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYT+ALY+L LFY+AC+DLLQPFNPVPKF+IIKSVVFLTYWQGVLVFLAAK+ +I
Sbjct: 176 IIYTISYTVALYALVLFYMACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           K+AE AA FQ+F+IC+EMLIAA  H YAFPYKEYAGAN+GGS  F+GSL+HA+KLNDFYH
Sbjct: 236 KSAEAAAHFQNFIICVEMLIAAACHFYAFPYKEYAGANVGGSGSFSGSLSHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSD-GDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPL 240
           DTVHQFAPTYHDYVLYNH D GDEGT+KYRSRTFVPTG EMD +R+NK ++ANK++ + +
Sbjct: 296 DTVHQFAPTYHDYVLYNHQDGGDEGTKKYRSRTFVPTGQEMDAMRKNKPVYANKIDGVSV 355

Query: 241 STIPQNS-------YTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPA 300
           S+   +              A  DA+KSSLL+DAS+SL T YDMSLID+D+SS+PS VP+
Sbjct: 356 SSSLSSEAXXXXXXXXXXXXARSDAVKSSLLVDASDSLETMYDMSLIDIDLSSFPSNVPS 415

[Close]

BLAST of Carg16438 vs. TAIR10
Match: AT1G77220.1 (Protein of unknown function (DUF300))

HSP 1 Score: 115.5 bits (288), Expect = 5.5e-26
Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           M C +    L  +F    K G +Q++ILK I   + +IL A G Y +G F     Y YL 
Sbjct: 165 MNCFVKDWSLGPQFYHAVKIGIVQYMILKMICALLAMILEAFGVYGEGKFAWNYGYPYLA 224

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           ++   S T ALY L  FY   KD L P  P+ KF+  KS+VFLT+WQG++V        +
Sbjct: 225 VVLNFSQTWALYCLVQFYNVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIIVAFLFSMGLV 284

Query: 121 KNA---EEAAQFQDFLICIEMLIAALGHLYAFPYKEY 155
           K +   E   + QD++ICIEM IAA+ HLY FP   Y
Sbjct: 285 KGSLAKELKTRIQDYIICIEMGIAAVVHLYVFPAAPY 321

[Close]

BLAST of Carg16438 vs. TAIR10
Match: AT4G38360.2 (Protein of unknown function (DUF300))

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-25
Identity = 70/175 (40.00%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           M   L P +L   F +  K G +Q++I+K +     LIL A G Y +G F     Y YL 
Sbjct: 143 MNLFLKPWRLSPWFYQVVKFGIVQYMIIKSLTALTALILEAFGVYCEGEFKWGCGYPYLA 202

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAA----- 120
           ++   S + ALY L  FY A KD L    P+ KF+  KS+VFLT+WQGV + L +     
Sbjct: 203 VVLNFSQSWALYCLVQFYGATKDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLSSLGLF 262

Query: 121 KTQWIKNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLA 171
           K+   ++ +     QDF+ICIEM IA++ HLY FP K Y    + G R FTGS++
Sbjct: 263 KSSIAQSLQLKTSVQDFIICIEMGIASVVHLYVFPAKPY---GLMGDR-FTGSVS 313

[Close]

BLAST of Carg16438 vs. TAIR10
Match: AT1G23070.1 (Protein of unknown function (DUF300))

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 19  KQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYTMSYTMALYSLALFY 78
           K G +Q++ILK     +T +L   G Y DG F     Y Y+ ++   S   AL+ L  FY
Sbjct: 155 KFGLVQYMILKTFCAFLTFLLELLGVYGDGEFKWYYGYPYIVVVLNFSQMWALFCLVQFY 214

Query: 79  VACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI-KNAEEAAQFQDFLICIE 138
               + L+   P+ KFI  K++VF T+WQG  + L      + K        QDFLICIE
Sbjct: 215 NVTHERLKEIKPLAKFISFKAIVFATWWQGFGIALLCYYGILPKEGRFQNGLQDFLICIE 274

Query: 139 MLIAALGHLYAFPYKEY 155
           M IAA+ HL+ FP + Y
Sbjct: 275 MAIAAVAHLFVFPAEPY 291

[Close]

BLAST of Carg16438 vs. Swiss-Prot
Match: sp|A2VDL9|T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus OX=9913 GN=TMEM184B PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-39
Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 2   TCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTI 61
           TCCL        F+R CKQ  LQF ++KP++   T++L A GKY DG+F+    YLY+TI
Sbjct: 157 TCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTI 216

Query: 62  IYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIK 121
           IY +S ++ALY+L LFY A ++LL P++PV KF ++KSV+FL++WQG+L+ +  K   I 
Sbjct: 217 IYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIP 276

Query: 122 NAEE----------AAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGS------RGF 181
                         AA +QDF+IC+EM  AAL   +AF YK YA   +         +  
Sbjct: 277 KIHSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRVDAQGRCAPMKSI 336

Query: 182 TGSLAHALKLNDFYHDTVHQFAPTYHDY 194
           + SL   +  +D   D +H F+P Y  Y
Sbjct: 337 SSSLKETMNPHDIVQDAIHNFSPAYQQY 364

[Close]

BLAST of Carg16438 vs. Swiss-Prot
Match: sp|Q8BG09|T184B_MOUSE (Transmembrane protein 184B OS=Mus musculus OX=10090 GN=Tmem184b PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-39
Identity = 85/208 (40.87%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 2   TCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTI 61
           TCCL        F+R CKQ  LQF ++KP++   T+IL A GKY DG+F+    YLY+TI
Sbjct: 157 TCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTI 216

Query: 62  IYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIK 121
           IY +S ++ALY+L LFY A ++LL P++PV KF ++KSV+FL++WQG+L+ +  K   I 
Sbjct: 217 IYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIP 276

Query: 122 NAEE----------AAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGS------RGF 181
                         AA +QDF+IC+EM  AAL   +AF YK YA   +         +  
Sbjct: 277 KINSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSI 336

Query: 182 TGSLAHALKLNDFYHDTVHQFAPTYHDY 194
           + SL   +  +D   D +H F+P Y  Y
Sbjct: 337 SSSLKETMNPHDIVQDAIHNFSPAYQQY 364

[Close]

BLAST of Carg16438 vs. Swiss-Prot
Match: sp|Q9Y519|T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens OX=9606 GN=TMEM184B PE=1 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-38
Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 2   TCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTI 61
           TCCL        F+R CKQ  LQF ++KP++   T++L A GKY DG+F+    YLY+TI
Sbjct: 157 TCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTI 216

Query: 62  IYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIK 121
           IY +S ++ALY+L LFY A ++LL P++PV KF ++KSV+FL++WQG+L+ +  K   I 
Sbjct: 217 IYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIP 276

Query: 122 NAEE----------AAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGS------RGF 181
                         AA +QDF+IC+EM  AAL   +AF YK YA   +         +  
Sbjct: 277 KIHSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSI 336

Query: 182 TGSLAHALKLNDFYHDTVHQFAPTYHDY 194
           + SL   +  +D   D +H F+P Y  Y
Sbjct: 337 SSSLKETMNPHDIVQDAIHNFSPAYQQY 364

[Close]

BLAST of Carg16438 vs. Swiss-Prot
Match: sp|Q6ZMB5|T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens OX=9606 GN=TMEM184A PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-38
Identity = 91/245 (37.14%), Postives = 134/245 (54.69%), Query Frame = 0


Query: 2   TCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTI 61
           TCCL  +     F+R CKQ  LQF ++KP++   T+IL A GKY DG+FN +  YLY+T+
Sbjct: 166 TCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKYHDGDFNVRSGYLYVTL 225

Query: 62  IYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIK 121
           IY  S ++ALY+L LFY   ++LL+PF PV KF+ IK+V+FL++WQG+L+ +  +   I 
Sbjct: 226 IYNASVSLALYALFLFYFTTRELLRPFQPVLKFLTIKAVIFLSFWQGLLLAILERCGVIP 285

Query: 122 NAEE-----------AAQFQDFLICIEMLIAALGHLYAFPYKEYA------GANIGGSRG 181
             E            AA +Q+F+IC+EML A++   YAFP + YA       A     + 
Sbjct: 286 EVETSGGNKLGAGTLAAGYQNFIICVEMLFASVALRYAFPCQVYAEKKENSPAPPAPMQS 345

Query: 182 FTGSLAHALKLNDFYHDTVHQFAPTYHDYVLY----------NHSDGDEGTRKYRS---R 217
            +  +   +   D   D +H F+P Y  Y             + S G  G+RK RS   R
Sbjct: 346 ISSGIRETVSPQDIVQDAIHNFSPAYQHYTQQATHEAPRPGTHPSGGSGGSRKSRSLEKR 405

[Close]

BLAST of Carg16438 vs. Swiss-Prot
Match: sp|Q4QQS1|T184A_RAT (Transmembrane protein 184A OS=Rattus norvegicus OX=10116 GN=Tmem184a PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-38
Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 2   TCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTI 61
           TCCL  +     F+R CKQ  LQF I+KP++  +T+IL A  KY DG+FN    YLY+T+
Sbjct: 169 TCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLYVTL 228

Query: 62  IYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIK 121
           +Y  S ++ALY+L LFY A +DLL+PF PV KF+ IK+++FL++WQG+L+ +  +   I 
Sbjct: 229 VYNASVSLALYALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQGMLLAILERCGVIP 288

Query: 122 NAEE-----------AAQFQDFLICIEMLIAALGHLYAFPYKEY-----AGANIGGSRGF 181
             +            AA +Q+FLICIEML A+L   YAFP + Y     + A     +  
Sbjct: 289 EVQAVDGTRVGAGTLAAGYQNFLICIEMLFASLALRYAFPSQVYSEKKNSPAPPAPMQSI 348

Query: 182 TGSLAHALKLNDFYHDTVHQFAPTYHDY 194
           +  L   +   D   D +H F+P Y  Y
Sbjct: 349 SSGLKETISPQDIVQDAIHNFSPAYQQY 376

[Close]

BLAST of Carg16438 vs. TrEMBL
Match: tr|A0A1S4E266|A0A1S4E266_CUCME (transmembrane protein 184A-like OS=Cucumis melo OX=3656 GN=LOC103493816 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 2.3e-151
Identity = 271/305 (88.85%), Postives = 286/305 (93.77%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT
Sbjct: 116 MTCCLPPLALDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+I
Sbjct: 176 IIYTISYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAE+AAQFQDF+ICIEMLIAALGHLYAFPYKEYAGANIGGSRG TGSLAHA+KLNDFYH
Sbjct: 236 KNAEQAAQFQDFIICIEMLIAALGHLYAFPYKEYAGANIGGSRGLTGSLAHAVKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMF NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFGNKIDDIQLS 355

Query: 241 TIPQNSYT------VLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAAN 300
           TI  +S +      VLEP + D MKSSLL+DASNSLSTPYDMSLIDLD+SSYPSKV AA+
Sbjct: 356 TISSSSSSTPNHSEVLEPTNSDVMKSSLLLDASNSLSTPYDMSLIDLDLSSYPSKVAAAD 415

[Close]

BLAST of Carg16438 vs. TrEMBL
Match: tr|A0A0A0LGL5|A0A0A0LGL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035400 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.9e-145
Identity = 265/296 (89.53%), Postives = 278/296 (93.92%), Query Frame = 0


Query: 10  LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYTMSYTM 69
           L  RFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYT+SYTM
Sbjct: 24  LKKRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLTIIYTISYTM 83

Query: 70  ALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWIKNAEEAAQF 129
           ALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQ+IKNAE+AAQF
Sbjct: 84  ALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQFIKNAEQAAQF 143

Query: 130 QDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYHDTVHQFAPT 189
           QDF+ICIEMLIAALGHLYAFPYKEYAGANIGGSRG TGSLAHA+KLNDFYHDTVHQFAPT
Sbjct: 144 QDFIICIEMLIAALGHLYAFPYKEYAGANIGGSRGLTGSLAHAVKLNDFYHDTVHQFAPT 203

Query: 190 YHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLSTIPQNSYT- 249
           YHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMF NK++DI LSTI  +S + 
Sbjct: 204 YHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFGNKLDDIQLSTISSSSSST 263

Query: 250 -----VLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAANETETR 300
                VLEP + DAMKSSLL+DASNSLSTPYDMSLIDLDMSSYPSKV AA+ET TR
Sbjct: 264 PNHPEVLEPTNSDAMKSSLLLDASNSLSTPYDMSLIDLDMSSYPSKVAAADETITR 319

[Close]

BLAST of Carg16438 vs. TrEMBL
Match: tr|A0A2N9FQL0|A0A2N9FQL0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17093 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.3e-143
Identity = 254/306 (83.01%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNF+PKQSYLYLT
Sbjct: 116 MTCCLPPIPLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFSPKQSYLYLT 175

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFY ACKDLLQPFNPVPKFI+IKSVVFLTYWQGVLVFLAAK+ +I
Sbjct: 176 IIYTISYTMALYALALFYFACKDLLQPFNPVPKFILIKSVVFLTYWQGVLVFLAAKSGFI 235

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           K+AEEAAQFQ+F+IC+EMLIAA+GHLYAFPYKEYAGANIG SRG TGSLAHALKLNDFYH
Sbjct: 236 KDAEEAAQFQNFIICVEMLIAAVGHLYAFPYKEYAGANIGVSRGLTGSLAHALKLNDFYH 295

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNH++GDEGTRKYRSRTFVPTGPEM++VR+NKHMF NK++DI LS
Sbjct: 296 DTVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGPEMESVRKNKHMFGNKLDDIQLS 355

Query: 241 TI-------PQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 300
           ++       P+N  +V +    D MKSSLL+D SNSLS PYDMSLI+LDMS+YPSKVPAA
Sbjct: 356 SLSSSSTSTPKNPDSVTDSLQSDVMKSSLLLDTSNSLSVPYDMSLIELDMSTYPSKVPAA 415

[Close]

BLAST of Carg16438 vs. TrEMBL
Match: tr|A0A2P5DRD7|A0A2P5DRD7_9ROSA (Organic solute transporter subunit alpha/Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_244550 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.8e-141
Identity = 249/306 (81.37%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTL+LYAKGKY+DGNF+PKQSYLYLT
Sbjct: 128 MTCCLPPIPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPKQSYLYLT 187

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKT  I
Sbjct: 188 IIYTVSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTGLI 247

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAEEAA+FQ+F+IC+EMLIAA+GHLYAFPYKEYAGANIG SRG TGSLAHALKLNDFYH
Sbjct: 248 KNAEEAAEFQNFIICVEMLIAAVGHLYAFPYKEYAGANIGASRGLTGSLAHALKLNDFYH 307

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNH++GDEG RKYRSRTFVPTGPEMD VR+NKHM  NK++DI LS
Sbjct: 308 DTVHQFAPTYHDYVLYNHNEGDEGRRKYRSRTFVPTGPEMDAVRKNKHMLGNKIDDIQLS 367

Query: 241 TI-------PQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 300
           ++       P++S ++ + A+ +AMKSSLL+D S + S PYDMSLIDLD+SSYP+KVPAA
Sbjct: 368 SLSSSNSSTPKDSQSMPDSANSEAMKSSLLVDTSTAFSVPYDMSLIDLDLSSYPAKVPAA 427

[Close]

BLAST of Carg16438 vs. TrEMBL
Match: tr|A0A2P5D8G5|A0A2P5D8G5_PARAD (Organic solute transporter subunit alpha/Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_086690 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.8e-141
Identity = 249/306 (81.37%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 1   MTCCLPPVQLDGRFIRRCKQGCLQFVILKPILVAVTLILYAKGKYEDGNFNPKQSYLYLT 60
           MTCCLPP+ LDGRFIRRCKQGCLQFVILKPILVAVTL+LYAKGKY+DGNF+PKQSYLYLT
Sbjct: 128 MTCCLPPIPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPKQSYLYLT 187

Query: 61  IIYTMSYTMALYSLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTQWI 120
           IIYT+SYTMALY+LALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKT  I
Sbjct: 188 IIYTVSYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKTGLI 247

Query: 121 KNAEEAAQFQDFLICIEMLIAALGHLYAFPYKEYAGANIGGSRGFTGSLAHALKLNDFYH 180
           KNAEEAA+FQ+F+IC+EMLIAA+GHLYAFPYKEYAGANIG SRG TGSLAHALKLNDFYH
Sbjct: 248 KNAEEAAEFQNFIICVEMLIAAVGHLYAFPYKEYAGANIGASRGLTGSLAHALKLNDFYH 307

Query: 181 DTVHQFAPTYHDYVLYNHSDGDEGTRKYRSRTFVPTGPEMDTVRRNKHMFANKVEDIPLS 240
           DTVHQFAPTYHDYVLYNH++GDEG RKYRSRTFVPTGPEMD VR+NKHM  NK++DI LS
Sbjct: 308 DTVHQFAPTYHDYVLYNHNEGDEGRRKYRSRTFVPTGPEMDAVRKNKHMLGNKIDDIQLS 367

Query: 241 TI-------PQNSYTVLEPAHPDAMKSSLLMDASNSLSTPYDMSLIDLDMSSYPSKVPAA 300
           ++       P++S ++ + A+ +AMKSSLL+D S + S PYDMSLIDLD+SSYP+KVPAA
Sbjct: 368 SLSSSNSSTPKDSQSMPDSANSEAMKSSLLVDTSTAFSVPYDMSLIDLDLSSYPAKVPAA 427

The following BLAST results are available for this feature:

BLAST of Carg16438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937992.1	1.3e-169	100.00	transmembrane protein 184B-like [Cucurbita moschata] >XP_022969621.1 transmembra...	[more]
XP_004144735.1	2.4e-152	89.84	PREDICTED: transmembrane protein 184A [Cucumis sativus] >XP_011648889.1 PREDICTE...	[more]
XP_022999694.1	1.5e-151	88.56	transmembrane protein 184A-like [Cucurbita maxima] >XP_022999695.1 transmembrane...	[more]
XP_008452971.1	3.4e-151	88.85	PREDICTED: transmembrane protein 184A-like [Cucumis melo] >XP_016902321.1 PREDIC...	[more]
XP_023545279.1	4.5e-151	88.24	transmembrane protein 184A-like [Cucurbita pepo subsp. pepo] >XP_023545280.1 tra...	[more]

BLAST of Carg16438 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05940.1	3.6e-134	76.41	Protein of unknown function (DUF300)	[more]
AT5G26740.1	1.0e-128	72.96	Protein of unknown function (DUF300)	[more]
AT1G77220.1	5.5e-26	40.76	Protein of unknown function (DUF300)	[more]
AT4G38360.2	6.1e-25	40.00	Protein of unknown function (DUF300)	[more]
AT1G23070.1	1.1e-18	37.96	Protein of unknown function (DUF300)	[more]

BLAST of Carg16438 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2VDL9\|T184B_BOVIN	9.2e-39	40.38	Transmembrane protein 184B OS=Bos taurus OX=9913 GN=TMEM184B PE=2 SV=1	[more]
sp\|Q8BG09\|T184B_MOUSE	9.2e-39	40.87	Transmembrane protein 184B OS=Mus musculus OX=10090 GN=Tmem184b PE=2 SV=1	[more]
sp\|Q9Y519\|T184B_HUMAN	1.2e-38	40.38	Transmembrane protein 184B OS=Homo sapiens OX=9606 GN=TMEM184B PE=1 SV=2	[more]
sp\|Q6ZMB5\|T184A_HUMAN	4.6e-38	37.14	Transmembrane protein 184A OS=Homo sapiens OX=9606 GN=TMEM184A PE=1 SV=1	[more]
sp\|Q4QQS1\|T184A_RAT	4.6e-38	40.38	Transmembrane protein 184A OS=Rattus norvegicus OX=10116 GN=Tmem184a PE=1 SV=1	[more]

BLAST of Carg16438 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E266\|A0A1S4E266_CUCME	2.3e-151	88.85	transmembrane protein 184A-like OS=Cucumis melo OX=3656 GN=LOC103493816 PE=4 SV=...	[more]
tr\|A0A0A0LGL5\|A0A0A0LGL5_CUCSA	1.9e-145	89.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035400 PE=4 SV=1	[more]
tr\|A0A2N9FQL0\|A0A2N9FQL0_FAGSY	2.3e-143	83.01	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17093 PE=4 SV=1	[more]
tr\|A0A2P5DRD7\|A0A2P5DRD7_9ROSA	2.8e-141	81.37	Organic solute transporter subunit alpha/Transmembrane protein OS=Trema oriental...	[more]
tr\|A0A2P5D8G5\|A0A2P5D8G5_PARAD	2.8e-141	81.37	Organic solute transporter subunit alpha/Transmembrane protein OS=Parasponia and...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005178	Ostalpha/TMEM184C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16438-RA	Carg16438-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PFAM	PF03619	Solute_trans_a	coord: 2..154 e-value: 2.3E-51 score: 174.8
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PANTHER	PTHR23423	ORGANIC SOLUTE TRANSPORTER-RELATED	coord: 1..295
None	No IPR available	PANTHER	PTHR23423:SF35	SUBFAMILY NOT NAMED	coord: 1..295

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16438	Cla020004	Watermelon (97103) v1	carwmB0913
Carg16438	Csa2G035400	Cucumber (Chinese Long) v2	carcuB0929
Carg16438	MELO3C004140	Melon (DHL92) v3.5.1	carmeB0900
Carg16438	ClCG02G014560	Watermelon (Charleston Gray)	carwcgB0889
Carg16438	CSPI02G05090	Wild cucumber (PI 183967)	carcpiB0952
Carg16438	Cucsa.090260	Cucumber (Gy14) v1	carcgyB1029
Carg16438	CmaCh12G008620	Cucurbita maxima (Rimu)	carcmaB1254
Carg16438	CmoCh12G008660	Cucurbita moschata (Rifu)	carcmoB1223
Carg16438	Lsi11G006740	Bottle gourd (USVL1VR-Ls)	carlsiB829
Carg16438	Cp4.1LG11g08490	Cucurbita pepo (Zucchini)	carcpeB1260
Carg16438	Cp4.1LG07g07130	Cucurbita pepo (Zucchini)	carcpeB1263
Carg16438	CsGy2G005230	Cucumber (Gy14) v2	carcgybB0902
Carg16438	MELO3C004140.2	Melon (DHL92) v3.6.1	carmedB0908
Carg16438	CsaV3_2G007450	Cucumber (Chinese Long) v3	carcucB0952
Carg16438	Cla97C02G040330	Watermelon (97103) v2	carwmbB0955
Carg16438	Bhi06G001242	Wax gourd	carwgoB1055

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16438	Carg11976	Silver-seed gourd	carcarB523

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16438	Cucurbita maxima (Rimu)	carcmaB1255
Carg16438	Cucurbita moschata (Rifu)	carcmoB1224
Carg16438	Watermelon (97103) v1	carwmB0912
Carg16438	Wax gourd	carwgoB1054