Carg16413 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16413
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	tetratricopeptide repeat protein 1
Location	Cucurbita_argyrosperma_scaffold_130 : 292614 .. 297166 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCTTCCTCTTGACTCTCTAAACCCAGAGTCTCAGAAACCAAATCATTTCAAATCTCTTCTGAATTCTGTTGATTCGTGGAAGAAAATGGTTCGTATAGAAATGGAGGAAACTGAAGACGAAGTTGTTCCCAGCCCTCCGAAGGCCTCTGCATCGAATAAAAATGCGACGGATTCAAGCGGCGGTGCGTCAACATCTAATGTGAGTAAAGACCCTTCTGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGCGTCAAGAGCATACTGATCAACATTCCGAACAGTTGGCACAAATTGCCACGCCCAGTGAGGATGAGATTAAAGAGGTTTTTTTCTCCCTTTGGGCTTCTTTTAGTGCTGTTTTTCTTGCTTCGCGATTGTTTTCTTTTGCTTTCTGCGATCAGCATTATCGGCTTTGGCAGTGATGATTTAATTATTCTTGCTCTAGTATCCGGTTTAACTTAAAGTTGTTCATGTATTGTTTTTCTCCTTGGTCAATTTTGATTTTCTTTGAGGTTGTGATCTGTGGGAATCACTACTACACAAGAACATTGTTTGAGATTCGAATCACTCCACAGGTAAGATCGAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAACGATATAACACTTGTTTGAGATTTGAATCACTCCATAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACCTGCAATCTAAACTTGATAGAATTGCAAAGAAACTTAGCCATTGGCTAAAGAAAGCACAAATGCTCATTTTACTATATTTTCAAGTCTACTTACAAATACAACGGCTTTATATAGCCTCAAAATGAAATTATTAAAGGCATTCCAAGAGCTGTAACATTCATACTTAATGACCATAATCAACTATTATGTAATTGTAACCTAATGTAAATAAAAAGGGTTAAAATACATTAATGAAATACAATAACTCTAAATTACTCTAAATTGTAATCTATCCAAAATTTATAACATGAAACTTCATTCTTCTTCAATGTGGCATGAATTGAAATATCTTTTGATATTTCAACAATATTTTCTTCACATCTTCATTGAAGTATATTGTATGATTGATGTCTCTTGGTTCATATCAGGTTGCCAATAACTTTTAACCTGGATTGTATCGCTATTCGACGCGAGGACCATATACTCTGCTGGCGACGTTTGAATGAAAATTTATGAATGCTTGAAAATGAATGGCCTGCATATCGCTTTGATCATGATACCACGGGCAGTTGTTTTCGCTTATGATGAAAAAACCTCGTTTAGAGAGGACTTCAGATTGTAGTAGATTTTTAGCTGTAATCAAAATTTGATGGAGCCAATGGAACTTTTGAAAGTTTGTGATCTGTTTAGGATCTTGATTTTCCCAGTTGGCCGTGATAGTAAAGTCCACATGACATACTGACATAAATCTTTTATGGCTCTATTGTAGTTTTTTCTTCACTCTCTAACTGTGAGAAATGGGTCTCTTTTATCTAGAAAGAAGATATTTGGTAAATAGTCATCTAAGCTGTTATGGTTTTGTAATTGTTATGCTAAGTTCATCTTTTATGCGGGCTTACAAGTTTCTAGGCTCATTTTTTCTCGAGTCATATGGATCTAATTCATTCTATTATATATCTGGCAGAAAGCCTTGGCTGAAGCAAACATTGCGAAAATGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCATTATTAGAGTATGATCGTGCTTTAACCATTTCTCCTGACATGCCCTCTGCAGTGGAGTTACGGTCAATATGCCAAGCAAACCGCGGCGCGTGTTTTCTGAAACAAGTACGTCTTTGTTAGATCCTAAATTGAAAACGACTGCAGTGTTTTTTCTTGTTTAGACATTTTTCTCGAGTTTGCGATGATATGCATTATAGCCATATATTTAATGTTTTTACTAATGTCACTAGAGGGCTACTTGTCAAATGACAGTATTCTATGTGAACTTTTGGTAGCACGCTTTGTTTCTTCATGGATGCTTTTGTTAGTTGTAGTCCCAACTCGTTTTGTTGCAAATTTTGAGGCTATTATGAGTGGCTTCACTAATCACTAACCCGAAAGATACGGATGAATTGAAATTCCCGCTCATAAATATAGGAACATGTGCAATTTTTGTGAAGACATTGATTGATTTGGAGATATGATGTTGCTTCCATAAATGACAAAGCATAACTAGTTCTATCAAATGACCTGAAAGTAAAAATTTGAAGTCACATCTCCATGTGAAAGATTTGTATTTTTAGTTCTCAGGTGGTCATCCTCAGACATGATTACTCTATGATTTATGATTTTTGCGAGGGAAAGGTCTTATGTAATCCTTTTGCCCGATTTCAAGTAGAAGCCTCTTCTACCCTTGGCCTTGATGATGTCAATATGTTAGTTTCTTATGCTTCAAAAATCACATGCCTGAAATTTCTCTTTTACACATCAGCCACTGAATATATAATGCATTTATATTGGAACTTCTTAGTGTATGCATCTGAATTTTGCTACTTGTGCACGAACTTGCACAACTTGTCCTGGCTGATGGATTGAACTTACCTCGCTATAAAAGCTGTGGTTGTTCATTATTCATAACTGCTGTTCATGTTGTTTTTTAGCTGTTATTTCGGTTTCAATGCAATTATACTATTTGCCGTTGGCCTAGTTTGGAGGTTCCCAATCCCCAGTTCAATGTTGTCGATGAAATAGTCAAATTCGGAAAATAACCGATGTGCATATGAGCCACGATTAGAGCCTAATTATCTTCTTAGCTTAATCTGTGGTTTTTTTTTTTTGGTAAGTTGCTTTCTTAACTTATTTTGTTTGCTAAACATTATTTCGGTCTCTGGTCTCTTTATCAATTTGGATGAATTAAAAGTAGAACTTGCTTGTGAACTTTTGCTTTAATTCCAGGTTAATGTATGTTTGCTTCACGTACTAATTATCTTGAACATGATCTTTTAAAGGAAAAATATGATGACACTGTAAAAGCATGCTCGAAGGCGATCGAACTGAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGCAGAGGCTCGTGAAAAGCTTGAACATTTTGAGGAGGCCATTAATGGTAAACTTTGATTTGCATGTATTACTGTTACTATGATCAATCTTGACGGCTGTTGTTTTCTTTAGATCTTTCCAGTATGTTCTAGAACTGTTGTACTCTAATCTACCTTTCTCAAATTTTACTTACCAAAACATGCGGTCACATATATTTTATTTACTTGCAGATATGAAAAAGATATTGGAATTGGATTCATCAAACGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACTAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTAAGCCTTCTTATATTTTTAAACTGCATGTTGGTATCATGTTGTTTTGGAATTTGCTTCCCCTGCTATTGGAAATTTAGCCACCATATTTCTTGTTGATATTGCAATGCACTAACAAAGAACAGTTGCCAAAATCTTACCTTCGAATTTTTTACGTGTATAATCTTATATATATTTTGGTTTGAGCAACATTGGAATCTAGATGAGCAAATACACATTGGACACTGTTTGGAGACCTACTTCGTCTACTAAGTCGATAGTTTGTTCCTTTTTCATGAGCCCGACTACCTTGTCTACTAAGTTGATAGTTTGCTCCACTTTCATGAACCCGACTACCTTGTCTACTAAGTTGATAGTTTGCTCCACTTTCATGAACCCGACTACCTTGTCTACTAAGTTGATAGTTTGTTCCTTTTTCATGAACCCGACTACTTCGTCTACTAAGTCGATACTTTGTTCCTTTCTCATGAATCCGACTACTTCGTCTACTAAGTCGATACTTTGTTCCTTTCTCATGAATCAGACTACTTCGTCTAGTAAGTCGATACTTTGTTCCTTTTTCATGAACCCAACTACCTCGTCTACTAAGTCGATAGTCTGTTCCTTTTTCATGAACCCGACTACTTTGCTTACTAAGCCGATACTTTGCTCCTTTTTCATGAACCTGAAATGCCATCATCTGTTTGAGCAGGGAAGTTGAAAGAGATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCAAATACTGGTTCCTATTCAATTTCATTCCAACAATAGTTTCGAGTTTGCTCGATTTGTATTTATGACCAACATACGAAAAACGACACCCTTATGTACTGGGCATTGGCTTATTCCTGGGTTTAATGTGTTCATAACTGATGGTAGTGTTTAAATTTTGGGCAATGGTCTTCTTAATTCTTGAGATGGCAAACTGGTTGCTGTGTTTCCTTCCTGTGGATGTTACTTGATTTGTTATTGTTACCTTATTATTGTGGACAGTATGCCTTTTATTTCAAGGTTGATGTGCTATACTGAAATTTGTTATTCTATTATTATTATTATTATTATTATTTTACCTATAATTTGTTTAGTCTTTGAATT

mRNA sequence

ATCATCTTCCTCTTGACTCTCTAAACCCAGAGTCTCAGAAACCAAATCATTTCAAATCTCTTCTGAATTCTGTTGATTCGTGGAAGAAAATGGTTCGTATAGAAATGGAGGAAACTGAAGACGAAGTTGTTCCCAGCCCTCCGAAGGCCTCTGCATCGAATAAAAATGCGACGGATTCAAGCGGCGGTGCGTCAACATCTAATGTGAGTAAAGACCCTTCTGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGCGTCAAGAGCATACTGATCAACATTCCGAACAGTTGGCACAAATTGCCACGCCCAGTGAGGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAACATTGCGAAAATGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCATTATTAGAGTATGATCGTGCTTTAACCATTTCTCCTGACATGCCCTCTGCAGTGGAGTTACGGTCAATATGCCAAGCAAACCGCGGCGCGTGTTTTCTGAAACAAGAAAAATATGATGACACTGTAAAAGCATGCTCGAAGGCGATCGAACTGAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGCAGAGGCTCGTGAAAAGCTTGAACATTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAACGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACTAAAACGAGAAAAGATGAAAGAAGAGATGATTGGGAAGTTGAAAGAGATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCAAATACTGGTTCCTATTCAATTTCATTCCAACAATAGTTTCGAGTTTGCTCGATTTGTATTTATGACCAACATACGAAAAACGACACCCTTATGTACTGGGCATTGGCTTATTCCTGGGTTTAATGTGTTCATAACTGATGGTAGTGTTTAAATTTTGGGCAATGGTCTTCTTAATTCTTGAGATGGCAAACTGGTTGCTGTGTTTCCTTCCTGTGGATGTTACTTGATTTGTTATTGTTACCTTATTATTGTGGACAGTATGCCTTTTATTTCAAGGTTGATGTGCTATACTGAAATTTGTTATTCTATTATTATTATTATTATTATTATTTTACCTATAATTTGTTTAGTCTTTGAATT

Coding sequence (CDS)

ATGGTTCGTATAGAAATGGAGGAAACTGAAGACGAAGTTGTTCCCAGCCCTCCGAAGGCCTCTGCATCGAATAAAAATGCGACGGATTCAAGCGGCGGTGCGTCAACATCTAATGTGAGTAAAGACCCTTCTGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGCGTCAAGAGCATACTGATCAACATTCCGAACAGTTGGCACAAATTGCCACGCCCAGTGAGGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAACATTGCGAAAATGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAGGCATTATTAGAGTATGATCGTGCTTTAACCATTTCTCCTGACATGCCCTCTGCAGTGGAGTTACGGTCAATATGCCAAGCAAACCGCGGCGCGTGTTTTCTGAAACAAGAAAAATATGATGACACTGTAAAAGCATGCTCGAAGGCGATCGAACTGAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGCAGAGGCTCGTGAAAAGCTTGAACATTTTGAGGAGGCCATTAATGATATGAAAAAGATATTGGAATTGGATTCATCAAACGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACTAAAACGAGAAAAGATGAAAGAAGAGATGATTGGGAAGTTGAAAGAGATGGGCAATTCTTTGTTGGGTCGTTTTGGTATGAGCGTGGACAACTTCAAGGCTGTCAAAGATCCAAATACTGGTTCCTATTCAATTTCATTCCAACAATAG

Protein sequence

MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELGDSGDERQEHTDQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ

Homology

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BLAST of Carg16413 vs. NCBI nr
Match: XP_022937601.1 (tetratricopeptide repeat protein 1-like [Cucurbita moschata])

HSP 1 Score: 458.0 bits (1177), Expect = 2.2e-125
Identity = 249/264 (94.32%), Postives = 249/264 (94.32%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEETEDE VPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGEL     
Sbjct: 1   MVRIEMEETEDE-VPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELGDSGD 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
                  QHSEQ AQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT
Sbjct: 61  ERQEHTDQHSEQEAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL
Sbjct: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAE KREKMKEEMIGKLKEMGNSLLGRF
Sbjct: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 225/264 (85.23%), Postives = 238/264 (90.15%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEE+EDE VPSPPKASAS +   DSSG  STS+ SK+PSDGYETASDGE XXXXX
Sbjct: 1   MVRIEMEESEDE-VPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGEXXXXXX 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
           XXXXXXX       QIA  SEDEIKEKALAEAN AK+AGNKLFGEGKYEEA++EYDRAL 
Sbjct: 61  XXXXXXXXXXXXXXQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PDMPSAVELRSIC ANRG CFLK EKYD+T+KACSKAIE+NPAYVKALSRR EA EKL
Sbjct: 121 IAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAI+DMKKILELDSSNDQAKKAIRRLEPLAE KREKMKEEMIGKLK+MGNSLLGRF
Sbjct: 181 EHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. NCBI nr
Match: XP_023538515.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 223/264 (84.47%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEETEDE VPSPPKASAS KNATD                          XXXXX
Sbjct: 1   MVRIEMEETEDE-VPSPPKASASTKNATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
           XXXXXXX        IATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRAL 
Sbjct: 61  XXXXXXXXXXXXXXXIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PDMPSAVELRSICQANR ACFLKQEKYD+TVKACSKAIELNPAYVKALSRRAEAREKL
Sbjct: 121 IAPDMPSAVELRSICQANRSACFLKQEKYDETVKACSKAIELNPAYVKALSRRAEAREKL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAE KREKMKEEMIGKLKEMGNSLLGRF
Sbjct: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. NCBI nr
Match: XP_022969664.1 (tetratricopeptide repeat protein 1-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 8.1e-96
Identity = 217/264 (82.20%), Postives = 220/264 (83.33%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEETEDE VPSPPKASAS KNA                            XXXXX
Sbjct: 1   MVRIEMEETEDE-VPSPPKASASTKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
           XXXXXXX          TPSEDEIKEKAL EAN AK+AGNKLFGEGKYEEALLEYDRAL 
Sbjct: 61  XXXXXXXXXXXXXXXXXTPSEDEIKEKALDEANNAKIAGNKLFGEGKYEEALLEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL
Sbjct: 121 IAPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAE KREKMKEEMIGKLKEMGNSLLGRF
Sbjct: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GM+VDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMNVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. NCBI nr
Match: XP_022946519.1 (tetratricopeptide repeat protein 1 [Cucurbita moschata])

HSP 1 Score: 357.1 bits (915), Expect = 5.3e-95
Identity = 211/264 (79.92%), Postives = 222/264 (84.09%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEE+EDE VPSPPKASAS +  TDSSG  S          GYET      XXXXX
Sbjct: 1   MVRIEMEESEDE-VPSPPKASASTQKTTDSSGVPSXXXXXXXXXXGYETXXXXXXXXXXX 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
           XXXXXXX        IA  SEDEIKEKALAEAN AK+AGNKLFGEGKYEEA++EYDRAL 
Sbjct: 61  XXXXXXXXXXXXXXXIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PDMPSA ELRSIC ANRG CFLK EKYD+T+KACSKAIE+NPAYVKALSRR EA E L
Sbjct: 121 IAPDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAI+DMKKILELDSSNDQAKKAIRRLEPLAE KREKMKEEMIGKLK+MGNSLLGRF
Sbjct: 181 EHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. TAIR10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-59
Identity = 137/237 (57.81%), Postives = 154/237 (64.98%), Query Frame = 0


Query: 44  SDGYETASDGEL---------XXXXXXXXXXXXQHSEQL-AQIATPSEDEI-------KE 103
           SDG+ETAS+ E+                     QHSE+   QI   SE E        KE
Sbjct: 40  SDGFETASEREISDEEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKE 99

Query: 104 KALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQ 163
           KALAEAN AK  GNKLF  G YEEAL +Y  AL +  ++P ++ELRSIC  N        
Sbjct: 100 KALAEANEAKAEGNKLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNXXXXXXXX 159

Query: 164 EKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKA 223
                       A+ELNP Y KAL RRAEA EKLEHFE+A+ D+KKILELD SNDQA+K 
Sbjct: 160 XXXXXXXXXXXXALELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKG 219

Query: 224 IRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQ 264
           IRRLEPLA  KREKMKEE I KLKEMGNS+LGRFGMSVDNFKAVKDPNTGSYS+SFQ
Sbjct: 220 IRRLEPLAAEKREKMKEEAITKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSLSFQ 276

[Close]

BLAST of Carg16413 vs. TAIR10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 48/169 (28.40%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 87  KALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQ 146
           ++L +++  K  GN+ F + K+ EA+  Y R++ +SP+        ++  ANR   +LK 
Sbjct: 79  ESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPN--------AVTYANRAMAYLKI 138

Query: 147 EKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKA 206
           ++Y +    C++A+ L+  Y+KA SRRA AR++L   +EA  D +  L L+  + + KK 
Sbjct: 139 KRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQELKKQ 198

Query: 207 IRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNT 256
              ++ L E   +++ E+  G ++     LL   G+     K ++ P T
Sbjct: 199 YADIKSLLE---KEIIEKATGAMQSTAQELLKTSGLD----KKIQKPKT 232

[Close]

BLAST of Carg16413 vs. TAIR10
Match: AT1G56090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 99  GNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSK 158
           G++L+ +GKY+EALL Y  ALT +   P  + L S    NR AC+LK   +    + C+ 
Sbjct: 14  GHQLYRDGKYKEALLFYTEALTAAKAKPQKIALHS----NRAACYLKLHDFIKAAEECTC 73

Query: 159 AIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLE------P 218
            +EL+  +  AL  RA+    L+ ++ A+ D+ +++EL+  ++  +    RL       P
Sbjct: 74  VLELDQKHSGALMLRAQTLVTLKEYQSALFDVTRLMELNPDSEVYQNLEARLRTQLSLAP 133

Query: 219 LAELKREKMKE 224
           + E + E  +E
Sbjct: 134 IPESEAELEEE 140

[Close]

BLAST of Carg16413 vs. TAIR10
Match: AT3G21640.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 43/159 (27.04%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 82  DEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPD----------MPSAVEL 141
           D   E+ +  A+  KM GN LF E K EEA+ +Y+ A+    D             A+ +
Sbjct: 169 DMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAV 228

Query: 142 RSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMK 201
           ++ C  N  AC +K ++YD+ +  C+  +       KAL RR +A+ +L   + A +D +
Sbjct: 229 KNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFR 288

Query: 202 KILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLK 231
           K  +    +   ++ +R L    +   +K KE   G  K
Sbjct: 289 KAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFK 327

[Close]

BLAST of Carg16413 vs. TAIR10
Match: AT3G54010.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 35/123 (28.46%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 86  EKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT----ISPDMPSAVEL----RSICQA 145
           +  + EA+  +  GN+LF EGK+E A  +Y++ L     ++P      ++    R++   
Sbjct: 394 QSIMDEADKIRSTGNRLFKEGKFELAKAKYEKVLREFNHVNPQDEDEGKIFGDTRNMLHL 453

Query: 146 NRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELD 201
           N  AC LK  ++  +++ C+K +E  P +VK L RR  A      +++A ND   ++++D
Sbjct: 454 NVAACLLKMGEWRKSIETCNKVLEAKPGHVKGLYRRGMAYIAGGEYDDARNDFNMMIKVD 513

[Close]

BLAST of Carg16413 vs. Swiss-Prot
Match: sp|Q99614|TTC1_HUMAN (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.1e-31
Identity = 76/162 (46.91%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 103 FGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIEL 162
           F +G Y EA   Y RAL + P      + RSI  +NR A  +KQ+K +  +  CSKAI+L
Sbjct: 127 FKKGDYIEAESSYSRALEMCPS--CFQKERSILFSNRAAARMKQDKKEMAINDCSKAIQL 186

Query: 163 NPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMK 222
           NP+Y++A+ RRAE  EK +  +EA+ D K ILE D S  QA++A  RL    E + E++K
Sbjct: 187 NPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLK 246

Query: 223 EEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ 265
           EEM+GKLK++GN +L  FG+S +NF+  +D +TGSYSI+F Q
Sbjct: 247 EEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Carg16413 vs. Swiss-Prot
Match: sp|Q3ZBR5|TTC1_BOVIN (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-30
Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 105 EGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNP 164
           +G Y EA   Y RAL   P      + RS+  +NR A  +KQEK +  +  CSKAI+LNP
Sbjct: 129 KGDYIEAESSYTRALQTCPS--CFQKDRSVLFSNRAAARMKQEKKEMAISDCSKAIQLNP 188

Query: 165 AYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEE 224
           +Y++A+ RRAE  EK +  +EA+ D K ILE D S  QA++A  RL    E + E++KEE
Sbjct: 189 SYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEERNERLKEE 248

Query: 225 MIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ 265
           M+GKLK++GN +L  FG+S +NF+  +D +TGSYSI+F Q
Sbjct: 249 MLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Carg16413 vs. Swiss-Prot
Match: sp|Q91Z38|TTC1_MOUSE (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-28
Identity = 70/155 (45.16%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 110 EALLEYDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKA 169
           EA   Y +AL + P      + RS+  +NR A  +KQ+K +  +  CSKAI+LNP Y++A
Sbjct: 134 EAESSYSQALQMCP--ACFQKDRSVLFSNRAAARMKQDKKETAITDCSKAIQLNPTYIRA 193

Query: 170 LSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKL 229
           + RRAE  EK +  +EA+ D K +LE D S  QA++A  RL    E + E++KEEM+GKL
Sbjct: 194 ILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEERNERLKEEMLGKL 253

Query: 230 KEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ 265
           K++GN +L  FG+S +NF+  +D +TGSYSI+F Q
Sbjct: 254 KDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Carg16413 vs. Swiss-Prot
Match: sp|O94826|TOM70_HUMAN (Mitochondrial import receptor subunit TOM70 OS=Homo sapiens OX=9606 GN=TOMM70 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 88  ALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRGACFLKQE 147
           +L  A  AK  GNK F  GKYE+A+  Y  A+++ P   + V+L +  Q NR A F + +
Sbjct: 110 SLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKN-VDLSTFYQ-NRAAAFEQLQ 169

Query: 148 KYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSNDQAKKAI 207
           K+ +  + C+KA+ELNP YVKAL RRA+A EKL++ +E + D+  +  L+   +Q    +
Sbjct: 170 KWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGFQNQQSMLL 229

Query: 208 RRLEPLAELKREKMKEE 225
              + L  L +EK KE+
Sbjct: 230 AD-KVLKLLGKEKAKEK 243

[Close]

BLAST of Carg16413 vs. Swiss-Prot
Match: sp|Q9CZW5|TOM70_MOUSE (Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 80  SEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANR 139
           S D ++  +L  A  AK  GNK F  GKYE+A+  Y  A+++ P   + V+L +  Q NR
Sbjct: 105 SGDSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKN-VDLSTFYQ-NR 164

Query: 140 GACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDS- 199
            A F + +K+ +  + C+KA+ELNP YVKAL RRA+A EKL++ +E + D+  +  L+  
Sbjct: 165 AAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGF 224

Query: 200 SNDQAKKAIRRLEPLAELKREKMKEE 225
            N+Q+     ++  L  L +E  KE+
Sbjct: 225 QNEQSMLLADKV--LKLLGKENAKEK 246

[Close]

BLAST of Carg16413 vs. TrEMBL
Match: tr|A0A0A0LJ51|A0A0A0LJ51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.6e-92
Identity = 196/264 (74.24%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEE  DE VPSPPK S+S K  T                         EL     
Sbjct: 1   MVRIEMEEPHDE-VPSPPKPSSSVKTTTXXXXXXXXXXXXXXXXXXXXXXXXXELGDSAD 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
                  QHSEQ  +IAT SEDEIKEKALAEAN AK+AGNKLFGEGKYEEA+ EYDRAL 
Sbjct: 61  ECQENPDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PD+P+AVEL+SIC ANRG CFLK EKY DT+KACSKAIELNPAYVKALSRR EA EKL
Sbjct: 121 IAPDVPAAVELQSICHANRGVCFLKLEKYADTIKACSKAIELNPAYVKALSRRGEAHEKL 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
           EHFEEAINDMKKILELDSSNDQAKK IRRLEPLAE KREKMKEEMIGKLK+MGNSLLGRF
Sbjct: 181 EHFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Carg16413 vs. TrEMBL
Match: tr|A0A1S3BTU1|A0A1S3BTU1_CUCME (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103493454 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.3e-83
Identity = 196/264 (74.24%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MVRIEMEE +DE VP+PP  SAS         G STSN S               XXXXX
Sbjct: 1   MVRIEMEEHQDE-VPNPPNPSASXXXXXXXXXGPSTSNASXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALT 120
           XXXXXXX HSEQ  +IAT SEDEIKEKALAEAN AK+AGNKLFGEGKYEEA+ EYDRAL 
Sbjct: 61  XXXXXXXXHSEQGERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALN 120

Query: 121 ISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKL 180
           I+PD+P AVELRSIC ANRGACFLK EKYDDT+KACSKAIELNPAYVKALSRR EA E  
Sbjct: 121 IAPDVPVAVELRSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEXX 180

Query: 181 EHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRF 240
                       ILELDSSNDQAKK IRRLEPLAE KREKMKEEMIGKLK+MGNSLLGRF
Sbjct: 181 XXXXXXXXXXXXILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRF 240

Query: 241 GMSVDNFKAVKDPNTGSYSISFQQ 265
           GMSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 GMSVDNFKAVKDPNTGSYSISFQR 263

[Close]

BLAST of Carg16413 vs. TrEMBL
Match: tr|A0A072VLP7|A0A072VLP7_MEDTR (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Medicago truncatula OX=3880 GN=25487616 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.2e-72
Identity = 140/184 (76.09%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 81  EDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTISPDMPSAVELRSICQANRG 140
           ++E+K+KAL +AN AK+ GNKLF + KYEEAL +Y+ AL ++PDMPS+VE+RSIC ANRG
Sbjct: 87  DEELKQKALVQANEAKVEGNKLFVDAKYEEALTQYELALEVAPDMPSSVEIRSICHANRG 146

Query: 141 ACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLEHFEEAINDMKKILELDSSN 200
            CFLK  KY++TVK C+KA+ELNP YVKAL RR EA EKLEHFEEAI DMKKILE+D SN
Sbjct: 147 VCFLKMGKYENTVKECTKALELNPMYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSN 206

Query: 201 DQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSI 260
           DQA KAIRRLEPLA +KREKMKEEMI KLK+MGNSLLGRFGMSVDNFKAV+DPNTGSYS+
Sbjct: 207 DQAGKAIRRLEPLAAVKREKMKEEMIAKLKDMGNSLLGRFGMSVDNFKAVQDPNTGSYSV 266

Query: 261 SFQQ 265
           SFQQ
Sbjct: 267 SFQQ 270

[Close]

BLAST of Carg16413 vs. TrEMBL
Match: tr|B9T5B5|B9T5B5_RICCO (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0048640 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 158/265 (59.62%), Postives = 197/265 (74.34%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           MV IE E    EV  S       +   T++   A+ +N++ + SDG+ETAS+ E+     
Sbjct: 1   MVVIEAE----EVSSSXXXXXTHSTKETETIKPAAETNMNGNDSDGFETASEREVSDNED 60

Query: 61  XXXXXXXQHSEQLAQIATPSEDEIKEK-ALAEANIAKMAGNKLFGEGKYEEALLEYDRAL 120
                    ++        ++ E+K+K AL EAN AK+ GNK+FGEGKYEEALL+Y+ AL
Sbjct: 61  QQVKENPDSNQ--------NDYELKQKEALEEANEAKLEGNKVFGEGKYEEALLKYEVAL 120

Query: 121 TISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREK 180
            ++P++PS+VELRSIC +NRG CFLK  KY+DT+K C+KA+ELN +Y+KAL RR EA EK
Sbjct: 121 QVAPEIPSSVELRSICHSNRGVCFLKLGKYEDTIKECTKALELNSSYIKALLRRGEAHEK 180

Query: 181 LEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGNSLLGR 240
           LEHFEEAI DMKKILELD SNDQAKKAI  LEPLA +KREKMKEEMIGKLKE+GN++LGR
Sbjct: 181 LEHFEEAIADMKKILELDPSNDQAKKAIYLLEPLAAIKREKMKEEMIGKLKELGNNVLGR 240

Query: 241 FGMSVDNFKAVKDPNTGSYSISFQQ 265
           FGMSVDNFKAVKDPNTGSYS+SFQ+
Sbjct: 241 FGMSVDNFKAVKDPNTGSYSVSFQR 253

[Close]

BLAST of Carg16413 vs. TrEMBL
Match: tr|A0A1J7H3W9|A0A1J7H3W9_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_08470 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.0e-70
Identity = 157/270 (58.15%), Postives = 194/270 (71.85%), Query Frame = 0


Query: 1   MVRIEMEETEDEVVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELXXXXX 60
           M  I+ EE ED       + +  +K  T  S  A+  N   + SDG+ETASDG+      
Sbjct: 1   MAVIDHEENED-------RKTNLSKVPTAESSSATAEN---ETSDGFETASDGD------ 60

Query: 61  XXXXXXXQHSEQLAQIATP------SEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLE 120
                     EQ+ Q   P      + +E+ ++ALA+AN AK+ GNKLF +G++EEALL+
Sbjct: 61  -------DGEEQMKQGVPPITDSASNNEELVQEALAQANEAKVEGNKLFVDGQFEEALLQ 120

Query: 121 YDRALTISPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRA 180
           Y+ AL ++PDMPS+VE+RSIC ANR  CF+K  KYD+T+K C+KA+ELNP YVKAL RR 
Sbjct: 121 YELALQVAPDMPSSVEIRSICHANRAVCFVKLGKYDNTIKECTKALELNPVYVKALIRRG 180

Query: 181 EAREKLEHFEEAINDMKKILELDSSNDQAKKAIRRLEPLAELKREKMKEEMIGKLKEMGN 240
           EA EKLEH EEAI+DMKK LE+D SNDQA+K IRRLEPLA  KREKMKEEMI KLKEMGN
Sbjct: 181 EAHEKLEHIEEAISDMKKTLEIDPSNDQARKTIRRLEPLAAEKREKMKEEMIEKLKEMGN 240

Query: 241 SLLGRFGMSVDNFKAVKDPNTGSYSISFQQ 265
           S+LGRFGMS+DNFKAVKDPNTGSYS+SFQ+
Sbjct: 241 SVLGRFGMSIDNFKAVKDPNTGSYSMSFQR 247

The following BLAST results are available for this feature:

BLAST of Carg16413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937601.1	2.2e-125	94.32	tetratricopeptide repeat protein 1-like [Cucurbita moschata]	[more]
XP_023522143.1	3.3e-105	85.23	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_0235473...	[more]
XP_023538515.1	1.2e-99	84.47	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969664.1	8.1e-96	82.20	tetratricopeptide repeat protein 1-like [Cucurbita maxima]	[more]
XP_022946519.1	5.3e-95	79.92	tetratricopeptide repeat protein 1 [Cucurbita moschata]	[more]

BLAST of Carg16413 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30480.2	5.7e-59	57.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56440.2	1.0e-12	28.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56090.1	1.1e-09	30.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G21640.1	1.4e-09	27.04	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G54010.1	1.8e-09	28.46	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of Carg16413 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q99614\|TTC1_HUMAN	8.1e-31	46.91	Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1	[more]
sp\|Q3ZBR5\|TTC1_BOVIN	5.3e-30	46.88	Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1	[more]
sp\|Q91Z38\|TTC1_MOUSE	2.9e-28	45.16	Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1	[more]
sp\|O94826\|TOM70_HUMAN	1.1e-14	38.69	Mitochondrial import receptor subunit TOM70 OS=Homo sapiens OX=9606 GN=TOMM70 PE...	[more]
sp\|Q9CZW5\|TOM70_MOUSE	1.1e-14	37.67	Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 P...	[more]

BLAST of Carg16413 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJ51\|A0A0A0LJ51_CUCSA	3.6e-92	74.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1	[more]
tr\|A0A1S3BTU1\|A0A1S3BTU1_CUCME	2.3e-83	74.24	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103493454 PE=4 ...	[more]
tr\|A0A072VLP7\|A0A072VLP7_MEDTR	9.2e-72	76.09	Heat shock protein 70 (HSP70)-interacting protein, putative OS=Medicago truncatu...	[more]
tr\|B9T5B5\|B9T5B5_RICCO	2.1e-71	59.62	Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis ...	[more]
tr\|A0A1J7H3W9\|A0A1J7H3W9_LUPAN	3.0e-70	58.15	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_08470 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR001440	TPR_1
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16413-RA	Carg16413-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 166..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	PANTHER	PTHR22904:SF356	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 35..263
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 35..263
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 92..125 e-value: 1.1 score: 18.3 coord: 133..166 e-value: 2.2E-5 score: 33.9 coord: 167..200 e-value: 0.0085 score: 25.3
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 168..199 e-value: 0.033 score: 14.3
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 167..200 score: 8.467
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 92..125 score: 9.912
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 133..166 score: 8.349
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 50..231 e-value: 1.6E-38 score: 134.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 90..210
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 137..165 e-value: 9.1E-8 score: 31.5
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 92..200 score: 20.781

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16413	Cla022872	Watermelon (97103) v1	carwmB0914
Carg16413	Csa2G036720	Cucumber (Chinese Long) v2	carcuB0929
Carg16413	MELO3C004108	Melon (DHL92) v3.5.1	carmeB0900
Carg16413	ClCG11G012680	Watermelon (Charleston Gray)	carwcgB0888
Carg16413	CSPI02G05430	Wild cucumber (PI 183967)	carcpiB0952
Carg16413	Cucsa.089930	Cucumber (Gy14) v1	carcgyB1029
Carg16413	CmaCh05G010150	Cucurbita maxima (Rimu)	carcmaB1255
Carg16413	CmaCh12G008340	Cucurbita maxima (Rimu)	carcmaB1254
Carg16413	CmoCh05G010300	Cucurbita moschata (Rifu)	carcmoB1224
Carg16413	CmoCh12G008390	Cucurbita moschata (Rifu)	carcmoB1223
Carg16413	Lsi11G007080	Bottle gourd (USVL1VR-Ls)	carlsiB829
Carg16413	Cp4.1LG11g08210	Cucurbita pepo (Zucchini)	carcpeB1260
Carg16413	Cp4.1LG07g06930	Cucurbita pepo (Zucchini)	carcpeB1263
Carg16413	CsGy2G005550	Cucumber (Gy14) v2	carcgybB0902
Carg16413	MELO3C004108.2	Melon (DHL92) v3.6.1	carmedB0908
Carg16413	CsaV3_2G007790	Cucumber (Chinese Long) v3	carcucB0952
Carg16413	Cla97C11G218550	Watermelon (97103) v2	carwmbB0954
Carg16413	Bhi06G001194	Wax gourd	carwgoB1054

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16413	Carg11952	Silver-seed gourd	carcarB523

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16413	Melon (DHL92) v3.5.1	carmeB0898
Carg16413	Melon (DHL92) v3.6.1	carmedB0907
Carg16413	Watermelon (Charleston Gray)	carwcgB0892
Carg16413	Watermelon (97103) v1	carwmB0915
Carg16413	Watermelon (97103) v2	carwmbB0959
Carg16413	Silver-seed gourd	carcarB493
Carg16413	Cucumber (Gy14) v2	carcgybB0901
Carg16413	Cucurbita maxima (Rimu)	carcmaB1253
Carg16413	Wild cucumber (PI 183967)	carcpiB0951
Carg16413	Cucumber (Chinese Long) v3	carcucB0951