Carg16302 (gene) Silver-seed gourd

Overview
NameCarg16302
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionglutamate-1-semialdehyde-2,1-aminomutase
LocationCucurbita_argyrosperma_scaffold_088 : 9685 .. 10442 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGGTGGTCTATATATACCTTCTCTTATCTTCTTCCATCTTTTAACACAGTTTCCAGGGAGAACATGGCGGTCAATTGCTGGCTTCGTCGGAATCGGCCTCCCATGCGCCACTGAGTTATCTCGTACCTCTTCACGGTCAGCTCGTTTTGGCCGTGTCAAAATGGCCGTCACTCTCGATGAGAAGAAGAATTTCACTCTCAAGAAGTCTGAAGAGGCTTTCAATGCTGCCAAGGTACATTTCTTGTTTTCGTTCACTTTTATCCTTCCACGTCCGTGGAATCTTTCGGATTGTTTGGTGAAACTCCTCTTTTTTGTAATCGTTGGCTTTTTCTGTGTTCGCATTAGGTTTTCAGTCTGTGTTTAGATATGTTTGATTGAGGATGAGAATTCGATTTGAATTCCATGGTCTGTGATTCTGATTCCTAGTGGCGATTTTAATGACCGAGGAGTGCGATCAGATTTTTGTTGTAACGCGCATTTTGTGGTTTTGTTGTGATTTGTTCGACGTTCGACGTCCTGATGGTGAAAATAGTTTTGAACGCTTTTGAAAATTGTATGCAGGAGCTAATGCCTGGTGGAGTGAATTCCCCTGTTCGTGCCTTCAAATCTGTTGGTGGACAACCGATAATAATCGATTCTGTAAAGGGTTCCCACATGTGGGATATTGACGGTAATGAATATGTTGATTATGTGGGTTCTTGGGGACCGGCGATTATTGGTCATGCTGATGATGAGGTACAATTCCCCATAGTTTAG

mRNA sequence

AGTGGTGGTCTATATATACCTTCTCTTATCTTCTTCCATCTTTTAACACAGTTTCCAGGGAGAACATGGCGGTCAATTGCTGGCTTCGTCGGAATCGGCCTCCCATGCGCCACTGAGTTATCTCGTACCTCTTCACGGTCAGCTCGTTTTGGCCGTGTCAAAATGGCCGTCACTCTCGATGAGAAGAAGAATTTCACTCTCAAGAAGTCTGAAGAGGCTTTCAATGCTGCCAAGGAGCTAATGCCTGGTGGAGTGAATTCCCCTGTTCGTGCCTTCAAATCTGTTGGTGGACAACCGATAATAATCGATTCTGTAAAGGGTTCCCACATGTGGGATATTGACGGTAATGAATATGTTGATTATGTGGGTTCTTGGGGACCGGCGATTATTGGTCATGCTGATGATGAGGTACAATTCCCCATAGTTTAG

Coding sequence (CDS)

AGTGGTGGTCTATATATACCTTCTCTTATCTTCTTCCATCTTTTAACACAGTTTCCAGGGAGAACATGGCGGTCAATTGCTGGCTTCGTCGGAATCGGCCTCCCATGCGCCACTGAGTTATCTCGTACCTCTTCACGGTCAGCTCGTTTTGGCCGTGTCAAAATGGCCGTCACTCTCGATGAGAAGAAGAATTTCACTCTCAAGAAGTCTGAAGAGGCTTTCAATGCTGCCAAGGAGCTAATGCCTGGTGGAGTGAATTCCCCTGTTCGTGCCTTCAAATCTGTTGGTGGACAACCGATAATAATCGATTCTGTAAAGGGTTCCCACATGTGGGATATTGACGGTAATGAATATGTTGATTATGTGGGTTCTTGGGGACCGGCGATTATTGGTCATGCTGATGATGAGGTACAATTCCCCATAGTTTAG

Protein sequence

SGGLYIPSLIFFHLLTQFPGRTWRSIAGFVGIGLPCATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEVQFPIV
Homology
[Close]
BLAST of Carg16302 vs. NCBI nr
Match: XP_022972470.1 (glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 8.3e-55
Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGG 84
           ++AGFVGIGLPCAT LSRTSSRSARFGRVKMAVT DEKKNFTL KSEEAFNAAKELMPGG
Sbjct: 4   TLAGFVGIGLPCATRLSRTSSRSARFGRVKMAVTFDEKKNFTLNKSEEAFNAAKELMPGG 63

Query: 85  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 64  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 116

[Close]
BLAST of Carg16302 vs. NCBI nr
Match: XP_023511406.1 (glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGG 84
           ++AGFV IGLPCAT+LSRTSSRSARFGRVKMAVTLDEKKNFTL KSEEAFNAAKELMPGG
Sbjct: 4   TLAGFVRIGLPCATKLSRTSSRSARFGRVKMAVTLDEKKNFTLNKSEEAFNAAKELMPGG 63

Query: 85  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 64  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 116

[Close]
BLAST of Carg16302 vs. NCBI nr
Match: XP_022952547.1 (glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 217.2 bits (552), Expect = 3.5e-53
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0 

Query: 28  GFVGIGLPCATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGGVNS 87
           GFVGI LP ATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFN+AKELMPGGVNS
Sbjct: 6   GFVGIDLPWATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNSAKELMPGGVNS 65

Query: 88  PVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           PVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 66  PVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 115

[Close]
BLAST of Carg16302 vs. NCBI nr
Match: XP_008455107.1 (PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucumis melo] >XP_008455109.1 PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucumis melo] >ADN34256.1 glutamate-1-semialdehyde 21-aminomutase [Cucumis melo subsp. melo])

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSR-TSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 84
           S AG VGIGLPC+T+LS  T+SRS+R  RVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG
Sbjct: 4   SFAGSVGIGLPCSTKLSHTTTSRSSRCHRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 63

Query: 85  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 64  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 117

[Close]
BLAST of Carg16302 vs. NCBI nr
Match: XP_022927826.1 (glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita moschata] >XP_022927827.1 glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 207.2 bits (526), Expect = 3.6e-50
Identity = 100/113 (88.50%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGG 84
           ++AG +GIGLPC+T+LS T+SRS+R  RVKMA TLDEKKNFTLKKSEEAF AAKELMPGG
Sbjct: 18  ALAGSLGIGLPCSTKLSHTTSRSSRLVRVKMAATLDEKKNFTLKKSEEAFKAAKELMPGG 77

Query: 85  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 78  VNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 130

[Close]
BLAST of Carg16302 vs. TAIR10
Match: AT5G63570.1 (glutamate-1-semialdehyde-2,1-aminomutase)

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-40
Identity = 79/109 (72.48%), Postives = 95/109 (87.16%), Query Frame = 0 

Query: 32  IGLPCATELSRTSSRSARFGR--VKMAVTLDE-KKNFTLKKSEEAFNAAKELMPGGVNSP 91
           +G  C++++S+  S S    R  +KM+V++DE KK+F+L+KSEEAFNAAK LMPGGVNSP
Sbjct: 12  LGFSCSSKISKRVSSSPASNRCCIKMSVSVDEKKKSFSLQKSEEAFNAAKNLMPGGVNSP 71

Query: 92  VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VRAFKSVGGQP++IDSVKGS MWDIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 72  VRAFKSVGGQPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEV 120

[Close]
BLAST of Carg16302 vs. TAIR10
Match: AT3G48730.1 (glutamate-1-semialdehyde 2,1-aminomutase 2)

HSP 1 Score: 156.8 bits (395), Expect = 1.0e-38
Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 0 

Query: 30  VGIGLPCATELSRTSSRSARFGRVKMAVTLDEK-KNFTLKKSEEAFNAAKELMPGGVNSP 89
           + +G  C+ + S+ +S S+    +KM+V+++EK K FTL+KSEEAFNAAK LMPGGVNSP
Sbjct: 10  IALGFSCSAKFSKRASSSSNRRCIKMSVSVEEKTKKFTLQKSEEAFNAAKNLMPGGVNSP 69

Query: 90  VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VRAFKSVGGQP+++DS KGS + DIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 70  VRAFKSVGGQPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEV 118

[Close]
BLAST of Carg16302 vs. Swiss-Prot
Match: sp|Q85WB7|GSA_BRANA (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus OX=3708 GN=GSA PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-39
Identity = 80/108 (74.07%), Postives = 95/108 (87.96%), Query Frame = 0 

Query: 32  IGLPCATELS-RTSSRSARFGRVKMAVTLDE-KKNFTLKKSEEAFNAAKELMPGGVNSPV 91
           +G  C++++S R SS  +    +KM+V++DE KK+FTL+KSEEAFNAAK LMPGGVNSPV
Sbjct: 12  LGFSCSSKISKRVSSSPSTRCSIKMSVSVDEKKKSFTLQKSEEAFNAAKNLMPGGVNSPV 71

Query: 92  RAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           RAFKSVGGQP++IDSVKGS MWDIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 72  RAFKSVGGQPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEV 119

[Close]
BLAST of Carg16302 vs. Swiss-Prot
Match: sp|P42799|GSA1_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GSA1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-39
Identity = 79/109 (72.48%), Postives = 95/109 (87.16%), Query Frame = 0 

Query: 32  IGLPCATELSRTSSRSARFGR--VKMAVTLDE-KKNFTLKKSEEAFNAAKELMPGGVNSP 91
           +G  C++++S+  S S    R  +KM+V++DE KK+F+L+KSEEAFNAAK LMPGGVNSP
Sbjct: 12  LGFSCSSKISKRVSSSPASNRCCIKMSVSVDEKKKSFSLQKSEEAFNAAKNLMPGGVNSP 71

Query: 92  VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VRAFKSVGGQP++IDSVKGS MWDIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 72  VRAFKSVGGQPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEV 120

[Close]
BLAST of Carg16302 vs. Swiss-Prot
Match: sp|Q42522|GSA2_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GSA2 PE=2 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-37
Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 0 

Query: 30  VGIGLPCATELSRTSSRSARFGRVKMAVTLDEK-KNFTLKKSEEAFNAAKELMPGGVNSP 89
           + +G  C+ + S+ +S S+    +KM+V+++EK K FTL+KSEEAFNAAK LMPGGVNSP
Sbjct: 10  IALGFSCSAKFSKRASSSSNRRCIKMSVSVEEKTKKFTLQKSEEAFNAAKNLMPGGVNSP 69

Query: 90  VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VRAFKSVGGQP+++DS KGS + DIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 70  VRAFKSVGGQPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEV 118

[Close]
BLAST of Carg16302 vs. Swiss-Prot
Match: sp|P18492|GSA_HORVU (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Hordeum vulgare OX=4513 GN=GSA PE=1 SV=3)

HSP 1 Score: 154.5 bits (389), Expect = 9.1e-37
Identity = 78/119 (65.55%), Postives = 95/119 (79.83%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSRT-SSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 84
           ++A  + I    A ++SR   SRS     V+ AV++DEK  +T++KSEE FNAAKELMPG
Sbjct: 7   AVASGISIRPVAAPKISRAPRSRSV----VRAAVSIDEKA-YTVQKSEEIFNAAKELMPG 66

Query: 85  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEVQFPIV 143
           GVNSPVRAFKSVGGQPI+ DSVKGSHMWD+DGNEY+DYVGSWGPAIIGHADD+V   ++
Sbjct: 67  GVNSPVRAFKSVGGQPIVFDSVKGSHMWDVDGNEYIDYVGSWGPAIIGHADDKVNAALI 120

[Close]
BLAST of Carg16302 vs. Swiss-Prot
Match: sp|P45621|GSA_SOYBN (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Glycine max OX=3847 GN=GSA1 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 76/100 (76.00%), Postives = 82/100 (82.00%), Query Frame = 0 

Query: 40  LSRTSSRSARFGRVKMAVTLDEK--KNFTLKKSEEAFNAAKELMPGGVNSPVRAFKSVGG 99
           L  + S S R   V MAV++D K     TL KSEEAF AAKELMPGGVNSPVRAFKSVGG
Sbjct: 13  LGMSLSSSTRSRTVAMAVSIDPKTDNKLTLTKSEEAFAAAKELMPGGVNSPVRAFKSVGG 72

Query: 100 QPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           QPI+IDSVKGS MWDIDGNEY+DYVGSWGPAIIGHADD+V
Sbjct: 73  QPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQV 112

[Close]
BLAST of Carg16302 vs. TrEMBL
Match: tr|A0A1S3C0V8|A0A1S3C0V8_CUCME (glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495361 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSR-TSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 84
           S AG VGIGLPC+T+LS  T+SRS+R  RVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG
Sbjct: 4   SFAGSVGIGLPCSTKLSHTTTSRSSRCHRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 63

Query: 85  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 64  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 117

[Close]
BLAST of Carg16302 vs. TrEMBL
Match: tr|E5GCQ7|E5GCQ7_CUCME (Glutamate-1-semialdehyde 21-aminomutase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCATELSR-TSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 84
           S AG VGIGLPC+T+LS  T+SRS+R  RVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG
Sbjct: 4   SFAGSVGIGLPCSTKLSHTTTSRSSRCHRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPG 63

Query: 85  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 64  GVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 117

[Close]
BLAST of Carg16302 vs. TrEMBL
Match: tr|A0A0A0K488|A0A0A0K488_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067490 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.5e-49
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 30  VGIGLPCATELSR-TSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKELMPGGVNSP 89
           VGIGLPC+T+LS  T+SRS RF RVKMAVTLDEKK FTLKKSEEAFNAAKELMPGGVNSP
Sbjct: 41  VGIGLPCSTKLSHTTTSRSFRFSRVKMAVTLDEKKKFTLKKSEEAFNAAKELMPGGVNSP 100

Query: 90  VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV
Sbjct: 101 VRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 149

[Close]
BLAST of Carg16302 vs. TrEMBL
Match: tr|A0A2P5FD46|A0A2P5FD46_9ROSA (Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_085380 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.0e-42
Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = 0 

Query: 27  AGFVGIGLPCA------TELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAKEL 86
           A  VG GL C+      T +S+ S  S RF  VKMAV+LDEKKNFTLKKSEEAFNAAKEL
Sbjct: 7   AAVVGFGLSCSSVKLSQTPISQFSQPSRRFCGVKMAVSLDEKKNFTLKKSEEAFNAAKEL 66

Query: 87  MPGGVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           MPGGVNSPVRAFKSVGGQPI+IDSVKGS M DIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 67  MPGGVNSPVRAFKSVGGQPIVIDSVKGSRMRDIDGNEYIDYVGSWGPAIIGHADDEV 123

[Close]
BLAST of Carg16302 vs. TrEMBL
Match: tr|A0A2P5DVB3|A0A2P5DVB3_PARAD (Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028410 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.1e-42
Identity = 92/119 (77.31%), Postives = 99/119 (83.19%), Query Frame = 0 

Query: 25  SIAGFVGIGLPCAT------ELSRTSSRSARFGRVKMAVTLDEKKNFTLKKSEEAFNAAK 84
           S A  VG+GL C+T       +S+ S  S RF  VKMAV+LDEKKNFTLKKSE AFNAAK
Sbjct: 4   SSAAVVGVGLSCSTVKLSQRPISQFSQSSRRFCCVKMAVSLDEKKNFTLKKSEAAFNAAK 63

Query: 85  ELMPGGVNSPVRAFKSVGGQPIIIDSVKGSHMWDIDGNEYVDYVGSWGPAIIGHADDEV 138
           ELMPGGVNSPVRAFKSVGGQPI+IDSVKGS M DIDGNEY+DYVGSWGPAIIGHADDEV
Sbjct: 64  ELMPGGVNSPVRAFKSVGGQPIVIDSVKGSRMRDIDGNEYIDYVGSWGPAIIGHADDEV 122

The following BLAST results are available for this feature:
BLAST of Carg16302 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022972470.18.3e-5595.58glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita maxima... [more]
XP_023511406.11.9e-5495.58glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic isoform X3 [Cucurbita ... [more]
XP_022952547.13.5e-5397.27glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita moscha... [more]
XP_008455107.12.8e-5091.23PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucum... [more]
XP_022927826.13.6e-5088.50glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like [Cucurbita moscha... [more]
BLAST of Carg16302 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G63570.11.4e-4072.48glutamate-1-semialdehyde-2,1-aminomutase[more]
AT3G48730.11.0e-3867.89glutamate-1-semialdehyde 2,1-aminomutase 2[more]
BLAST of Carg16302 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q85WB7|GSA_BRANA1.5e-3974.07Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus OX=370... [more]
sp|P42799|GSA1_ARATH2.6e-3972.48Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic OS=Arabidopsis thalian... [more]
sp|Q42522|GSA2_ARATH1.8e-3767.89Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic OS=Arabidopsis thalian... [more]
sp|P18492|GSA_HORVU9.1e-3765.55Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Hordeum vulgare OX=45... [more]
sp|P45621|GSA_SOYBN1.3e-3576.00Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Glycine max OX=3847 G... [more]
BLAST of Carg16302 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C0V8|A0A1S3C0V8_CUCME1.8e-5091.23glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic-like OS=Cucumis melo O... [more]
tr|E5GCQ7|E5GCQ7_CUCME1.8e-5091.23Glutamate-1-semialdehyde 21-aminomutase OS=Cucumis melo subsp. melo OX=412675 PE... [more]
tr|A0A0A0K488|A0A0A0K488_CUCSA3.5e-4992.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067490 PE=3 SV=1[more]
tr|A0A2P5FD46|A0A2P5FD46_9ROSA7.0e-4278.63Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase OS=Trema or... [more]
tr|A0A2P5DVB3|A0A2P5DVB3_PARAD9.1e-4277.31Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase OS=Paraspon... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0008483transaminase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR005814Aminotrans_3
IPR015422PyrdxlP-dep_Trfase_dom1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16302-RACarg16302-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3DG3DSA:3.90.1150.10coord: 60..140
e-value: 4.7E-32
score: 113.1
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 99..137
e-value: 2.7E-6
score: 26.2
NoneNo IPR availablePANTHERPTHR43713FAMILY NOT NAMEDcoord: 44..138
NoneNo IPR availablePANTHERPTHR43713:SF2GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 1, CHLOROPLASTIC-RELATEDcoord: 44..138
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILYSSF53383PLP-dependent transferasescoord: 67..137