Carg16207 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16207
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_077 : 38331 .. 43515 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACAAACAACCCCATTTGAACGGCGCCTTCTACGGCCCCTCCGTCCCTCCCCCCACAAAGACCTACCACCGCCACGGCCACGGCCGAGGCTGCGCCTGCTGCCTCCTAAGCACCATTATCAAGCTCATCATTGGCATAGTGGTGGTGGTTGGCATAGCGGTGTTGATATTATGGCTCGTATTCCGTCCCAATAAGCTGAGGTTCGACGTCACCAGCGCCGAACTCACCCAATTCAACTTCACCGGCAACCAGCTCCATTACAATCTCGCTTTAAACCTCACCATTAGAAACCCCAACAAGCGGATTGGAGTGTACTACGACGCCATCGAAGCCTCCCCCTTTTACAAGGACCAGAGGCTTAACACCCACTGGCTGCCGCCCTTCTACCAAGGCCACAAGACCACCACCGTCGTAACCCCTCAATTCAACGGCCAGCAGCTCGTCCTCCTCGGCGCCCAGGAGCTGACAGAGTTCAACGCCGAGAAACTCGCCGGCGTGTTCAACATCGACGTCAAGTTCCGTCCTCGGTTGAGGTTGAAATTGGGCGCCGTTAGGATTGGGAAGTTGAAGCCAAAGGTCAACTGCGAATTGAAGGTTCCATTGGAATCAAGTGCCACCTCTTTTACTTTCTTTCAGGCCACTCGCTGCGATTTCGATTTCTGATTGGCCACCTCCGGTTTTTGACTCAGTCAACTTTTGGTGATTGTTTTGACTGAGTCAACTATATGCATATTTTGATTTGTTCTTTTGATTATCATTTTTTTCATTGTTTTTTGTTTCTATGTTCATATGCTCTTTCCGGTTTTTAGCTGTTTTTATTATTATTATTATTATTATTTTGGTATGAATAAATATTCTAGTTTTGTATATATTTTTGATCGATTCGATAATGTCCTGACTTTCTACCACCTTAGATCAATCCGAGTTCGTTATAAAATGCATATTAAGGTCATTTGATTTGTTGAGGGACATTAAAATTGGTTAGTCCAAACCACAAAATAATGGTATAATTCTCGTGGGCACTCATAGGTAATTGTCATATGACCATATCACATACGAATAGGTAGAATAATGAAGAAAACAAAAGGTAAGAACATGGGTTTGGCTATTAAGAGCAACCAAAAAACTAAACTCATTCGATGTTAGGGTAATGGTATGATATCAGAATTACACCAACTTGCAGCCTTCATATTCAATAGCTGACAAAGAAAGCATGAAGGGGCGACAAACCTGAACAGACAGTGTTGTTAGAAGAATGTTTTAGAGCCCTAAAAATGGAGGGAATTAGAACCAATTATGATGTATTCTATTATAAAGTTCGAAACTTTAAGCCAACCGTGTACGCTTCCACTTTTGTAGACTGTTTCTTTTTTGTGTTTCAATAATCGAATGTCAACTATATTCAAATTGCTTGAAAGTTTCAATCAACGCAGTTAAACCCCATTCCAACATGTTTTACCGTTATTGTCACGTGGACCGAAAATGTATAATCTTCTTTCAAGTTTGACAACAAAAGTACATATTCCATTCAATTTTGTGATGTTCCATATTAGTTCGGGAGGAGAACGAAACATTTTTTAGAAGGGTGTAGAAACTCTCCTTAGCATACCTGTTTTAAAAACCTTGAGTGAAAGCCCGAAAGAGAAATCCTAAAGAGGATAATATCTACTAGTAGTGAACTTGATTGAGTCGTTGTAAATGGTATCAGAGCCAAACATTGGGCGATGTGCCAACGAGGAGGTTGAGTCTCAGAGGGGGTGGACACGAGGCGGTGTGCCAGCAAGGTCACTGGACCCTGAAGAAGGGTGGATTGGGAGGTCCCACATCGATTGGAGAAGGGAACGAGTACCAGGAAGGACACCAGGTCTCAAAAGGGGTGAATGTGAGATCTCACATCGGTTAGGGAAAAGAACGAAACATTCTTTATAAGAGAAAGTCTGAAAGGAAAAGTCAAAAGAGGACAATATCTATTCGTGGGGTTGAGTCGTTACAACTAACATCGGGAAATGGTTTGAATGACGTTGAGGAAGGAGATCCATTCCGATGTCTTTGACCCATTATTCCTCCCATTTCAATTCAAAGTATACAAATTTTGAAGTTGGCTACGAAATGGGCATTTGAAAATGAATCCGCCATCTTCCTTCACTATATAAACCAAATCAAATCACACATCGTCTTACCAATTCATTGATCGTTCATTTCACCTTCCTTTGCAATTAATGGCCGACAGACAACCCTATTTGAACACCAACTTCTATGGCCCAGCCGTGCCTCCTTCGACAAAAGCCCACCGCAGCCGCCGCATCTTATGCACCATTCTGAAGGTGGCAATTAGTTTCATCGTGGGGGTTGGTATTCTATTGTTGATATTAGGGTTTGTGTACAGTCCAACAAAGCTGGAGTTCAACGTGAGCAGCGCCGAACTCACCCAATTCAACTTCACCATCAATAGAAACTTCAGTACCAATGCAAACATCAGAGTTGGCAATCCACTCTCTTACAAATTGGGTCTCAACGTAACCATCAGAAACCCCAACAAGTGGTACCGTGTCTACTACGACATCAACCAAATGGGTGTGGTTTATAAGAACCAAAGGCTTGAGACACAGTGGCTGCCAGCGTTCGCCCAAGGAACAAAGAGCACGGTGGTCCTCAACTCCAGGAAGTTCGAGGGTCAGCAGTTGGTGCTTCTTGGCGGCGATGAATTTGTTGAGTTTAACGCTGAGAAAAGCTCCGGCATTTACTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAAGTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCACACCAATGGAGATAGTATTCCTCACTTATAAACCCATGATCTTCCACTAAATTAACCAATGTGGGACACTCCCAATCCCAATAATCCTCAACATTTACCCCATTGATGTCAAGTTCTTTTTCCGGTTGAGGATGAAGTCCGGTACGGTGGTCTTGAAATTGAATCCCACGGTGTACTGTGGATTGAAGGTTCCTTTGATTAACGGTAAATCTCGGCGGCCTGGTGTAATGAGGATTCATGCTGCCACGGCTTGCGATTTCAAATTCTGATTCCTCGGATGAAAGTTAAAATTACAAATGATATGGAAAGAACAATATGTAAGCGGTAATGTAAGGAAAATATCTAGATATTTGTCTTATAATAAATGGTAACTACCCTTAACCATATGTGTTTACTAAAACGGAAGAAATGGCCTAATGAAACAAAAATCTTCCTTTCATTGCCATGGCTCTTGGCCTCATACTCTGTCCTAATAGCTGCTAAATTCGTGGGGGCCAAAACCTTTCGTACCATGCTTCATTGGTGCTCGAATTTGACTTAATTCCCTTGCCTTTAGCTAAAAATGAGAGTTTGCCGGTTTTGATGTCCAAATCTATCATGAATCGAAGATGGGTATACTATCTAATGTTGATGATTGTTGGGAGAGGAATCACATTAATTAAAGGGTTGATCATTGGTTTATGAGTAAGAAAAGCTATCTCCATAGGTATAACACCTTTTGAAAAAACTAGAAGCAAAACTAAGAAACCTTATATTCAAAGTAGATAATATTATACTATTATAAAGAGTTGTGGTTCTTAACATTTACCATAGTATCAGAGTCATGCTCTTAACTTAGGCATGCCAATAGATTTCTTAAATGTCAAACAAAAAAGTTGTGAGTCTTGAAAGTGTAGTCAAAACTGACTCATGTGTTGAAAAAAGGGTATCCTTTGTTCGAGGGCTCCAAAGAAGAAGTCAAGCCTCGATTAAAGGGAGGCTATTCCAGGGCTCCATAGGAGCGTCAGGAGAGGCTCTATAGTGTACTTTGTTTAGAGAAGAGTCCCACATCGGTTAATTAAAGGGTTGATCGATCACAAGTTTATAGGTAAAAAAACACTATATTCATTGGTATGACTCTTTTGGGGAAACAAAAAATAAAGTCACGAGAACTTATGCTCAAAGTTTGATCACAAGCTTTTGGGGAATCACGGATCTCGACGCTAATATGATATTGTCCACTTTGATCATAAGCTCTTATGTTTGCTTTTGGTTTCCCGAAAGGTTTCGTACCAATAGAGATAATACTCGTTACTTGTAAATTCACAATCTTCCTCGTAATTAACCAATGTAAAACTATTCCTCTCAATAATCCTCAATAGCCATCGGACCAAACACGGGAACTAGATAAACCAACACATTGAATTCCCTAAACTTTGATTAAACATCTGATCATATATGGATTAAATTCTTAAATAAAAGTCAACGCCTTAAATTACTGGGTCAGCAACCATAAGAAAAAACAAAATCTTTGTCCTCTTTCCATTGTCGAAGGCCATTGGAAATTAATTCCCACGAACTCCAAACAATGTTTTCTCCCTAAACTAAACGCCAATTTGGCAACTTCCCACTTTCTTTCTTATAAAAATCCCATCTTTTCTCTCATTTCAACCAATCCTCTGTAATTCAATTTCCTCTCTCTACAAACATGTCCGGCAAGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACTGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTGCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGGCTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATCGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAACCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCAGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

mRNA sequence

ATGGCTGACAAACAACCCCATTTGAACGGCGCCTTCTACGGCCCCTCCGTCCCTCCCCCCACAAAGACCTACCACCGCCACGGCCACGGCCGAGGCTGCGCCTGCTGCCTCCTAAGCACCATTATCAAGCTCATCATTGGCATAGTGGTGGTGGTTGGCATAGCGGTGTTGATATTATGGCTCGTATTCCGTCCCAATAAGCTGAGGTTCGACGTCACCAGCGCCGAACTCACCCAATTCAACTTCACCGGCAACCAGCTCCATTACAATCTCGCTTTAAACCTCACCATTAGAAACCCCAACAAGCGGATTGGAGTGTACTACGACGCCATCGAAGCCTCCCCCTTTTACAAGGACCAGAGGCTTAACACCCACTGGCTGCCGCCCTTCTACCAAGGCCACAAGACCACCACCGTCGTAACCCCTCAATTCAACGGCCAGCAGCTCGTCCTCCTCGGCGCCCAGGAGCTGACAGAGTTCAACGCCGAGAAACTCGCCGGCGTGTTCAACATCGACGTCAAGTTCCGTCCTCGGTTGAGGTTGAAATTGGGCGCCGTTAGGATTGGGAAGTTGAAGCCAAAGGTCAACTGCGAATTGAAGGTTCCATTGGAATCAACCGTGCCTCCTTCGACAAAAGCCCACCGCAGCCGCCGCATCTTATGCACCATTCTGAAGGTGGCAATTAGTTTCATCGTGGGGGTTGGTATTCTATTGTTGATATTAGGGTTTGTGTACAGTCCAACAAAGCTGGAGTTCAACGTGAGCAGCGCCGAACTCACCCAATTCAACTTCACCATCAATAGAAACTTCAGTACCAATGCAAACATCAGAGTTGGCAATCCACTCTCTTACAAATTGGGTCTCAACGTAACCATCAGAAACCCCAACAAGTGGTACCGTGTCTACTACGACATCAACCAAATGGGTGTGGTTTATAAGAACCAAAGGCTTGAGACACAGTGGCTGCCAGCGTTCGCCCAAGGAACAAAGAGCACGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACTGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTGCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGGCTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATCGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAACCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCAGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

Coding sequence (CDS)

ATGGCTGACAAACAACCCCATTTGAACGGCGCCTTCTACGGCCCCTCCGTCCCTCCCCCCACAAAGACCTACCACCGCCACGGCCACGGCCGAGGCTGCGCCTGCTGCCTCCTAAGCACCATTATCAAGCTCATCATTGGCATAGTGGTGGTGGTTGGCATAGCGGTGTTGATATTATGGCTCGTATTCCGTCCCAATAAGCTGAGGTTCGACGTCACCAGCGCCGAACTCACCCAATTCAACTTCACCGGCAACCAGCTCCATTACAATCTCGCTTTAAACCTCACCATTAGAAACCCCAACAAGCGGATTGGAGTGTACTACGACGCCATCGAAGCCTCCCCCTTTTACAAGGACCAGAGGCTTAACACCCACTGGCTGCCGCCCTTCTACCAAGGCCACAAGACCACCACCGTCGTAACCCCTCAATTCAACGGCCAGCAGCTCGTCCTCCTCGGCGCCCAGGAGCTGACAGAGTTCAACGCCGAGAAACTCGCCGGCGTGTTCAACATCGACGTCAAGTTCCGTCCTCGGTTGAGGTTGAAATTGGGCGCCGTTAGGATTGGGAAGTTGAAGCCAAAGGTCAACTGCGAATTGAAGGTTCCATTGGAATCAACCGTGCCTCCTTCGACAAAAGCCCACCGCAGCCGCCGCATCTTATGCACCATTCTGAAGGTGGCAATTAGTTTCATCGTGGGGGTTGGTATTCTATTGTTGATATTAGGGTTTGTGTACAGTCCAACAAAGCTGGAGTTCAACGTGAGCAGCGCCGAACTCACCCAATTCAACTTCACCATCAATAGAAACTTCAGTACCAATGCAAACATCAGAGTTGGCAATCCACTCTCTTACAAATTGGGTCTCAACGTAACCATCAGAAACCCCAACAAGTGGTACCGTGTCTACTACGACATCAACCAAATGGGTGTGGTTTATAAGAACCAAAGGCTTGAGACACAGTGGCTGCCAGCGTTCGCCCAAGGAACAAAGAGCACGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACTGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTGCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGGCTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATCGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAACCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCAGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

Protein sequence

MADKQPHLNGAFYGPSVPPPTKTYHRHGHGRGCACCLLSTIIKLIIGIVVVVGIAVLILWLVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQRLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLRLKLGAVRIGKLKPKVNCELKVPLESTVPPSTKAHRSRRILCTILKVAISFIVGVGILLLILGFVYSPTKLEFNVSSAELTQFNFTINRNFSTNANIRVGNPLSYKLGLNVTIRNPNKWYRVYYDINQMGVVYKNQRLETQWLPAFAQGTKSTQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW

Homology

[Close]

BLAST of Carg16207 vs. NCBI nr
Match: XP_022945227.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 333 QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH 392
           QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH
Sbjct: 5   QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH 64

Query: 393 VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 452
           VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY
Sbjct: 65  VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 124

Query: 453 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 512
           QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGA+RIGKF
Sbjct: 125 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAIRIGKF 184

Query: 513 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 546
           KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 185 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Carg16207 vs. NCBI nr
Match: XP_023005762.1 (NDR1/HIN1-like protein 10 [Cucurbita maxima])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 333 QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH 392
           QQT SNAVTYHRPGHHHN CGSGCG FTTFLKVL+TIIIVIGLAVLILWLIFRPNKVKFH
Sbjct: 5   QQTPSNAVTYHRPGHHHNHCGSGCGSFTTFLKVLVTIIIVIGLAVLILWLIFRPNKVKFH 64

Query: 393 VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 452
           VTDAKLTQFNLTDNQL FNLALNIT RNPN+RIGVYYDTIEAAAVYKDQRLQTKWLPPFY
Sbjct: 65  VTDAKLTQFNLTDNQLHFNLALNITVRNPNSRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 124

Query: 453 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 512
           QGHKTTAVLSPEFSGQQLLLLSGQGLAQF+SEKLAGVYDIDVELNLRIRLK GAVRIGKF
Sbjct: 125 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFSSEKLAGVYDIDVELNLRIRLKLGAVRIGKF 184

Query: 513 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 546
           KPKVNCE+KVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 185 KPKVNCEVKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Carg16207 vs. NCBI nr
Match: XP_023539525.1 (NDR1/HIN1-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.1 bits (884), Expect = 4.3e-91
Identity = 178/214 (83.18%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 333 QQTHSNAVTYHRPGHH-HNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKF 392
           QQT SNAVTYHRPGHH                                LWLIFRPNKVKF
Sbjct: 5   QQTPSNAVTYHRPGHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWLIFRPNKVKF 64

Query: 393 HVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPF 452
           HVTDAKLTQFNLTDNQL FNLALNITARNPN RIGVYYDTIEAAAVYKDQRLQTKWLPPF
Sbjct: 65  HVTDAKLTQFNLTDNQLHFNLALNITARNPNKRIGVYYDTIEAAAVYKDQRLQTKWLPPF 124

Query: 453 YQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGK 512
           YQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGK
Sbjct: 125 YQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGK 184

Query: 513 FKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 546
           FKPKVNCE+KVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 185 FKPKVNCEVKVTLSSDGSSAPSLFQSTGCDIDYW 218

[Close]

BLAST of Carg16207 vs. NCBI nr
Match: XP_023522982.1 (NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo] >XP_023540238.1 NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo] >XP_023540259.1 NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.7e-85
Identity = 205/211 (97.16%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60
           MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW
Sbjct: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60

Query: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120
           LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ
Sbjct: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120

Query: 121 RLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180
           RLNT WLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR
Sbjct: 121 RLNTQWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180

Query: 181 LKLGAVRIGKLKPKVNCELKVPLESTVPPST 212
           LKLGAVRIGKLKPKVNCELKVPLES+    T
Sbjct: 181 LKLGAVRIGKLKPKVNCELKVPLESSATSFT 211

[Close]

BLAST of Carg16207 vs. NCBI nr
Match: XP_022949287.1 (NDR1/HIN1-like protein 10 [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 5.1e-84
Identity = 203/211 (96.21%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60
           MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW
Sbjct: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60

Query: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120
           LVFRPNKLRFDVTSA+LTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEAS FYKDQ
Sbjct: 61  LVFRPNKLRFDVTSAQLTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASSFYKDQ 120

Query: 121 RLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180
           RLNT WLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR
Sbjct: 121 RLNTQWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180

Query: 181 LKLGAVRIGKLKPKVNCELKVPLESTVPPST 212
           LKLGAVRIGKLKPKVNCELKVPLES+    T
Sbjct: 181 LKLGAVRIGKLKPKVNCELKVPLESSATSFT 211

[Close]

BLAST of Carg16207 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-49
Identity = 99/209 (47.37%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 342 YHRPGHHHNRCGSGCGC--FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLT 401
           Y+R GH     G GCGC   + F+KV+I++I+++G+A LI WLI RP  +KFHVTDA LT
Sbjct: 24  YYRRGH-----GRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLT 83

Query: 402 QFNLT--DNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKT 461
           +F+ T  DN L++NLAL +  RNPN RIG+YYD IEA A Y+ +R  T  L PFYQGHK 
Sbjct: 84  RFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKN 143

Query: 462 TAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVN 521
           T VL+P F GQ L++ +       N+E+++GVY+I+++  LR+R K G ++  + KPKV+
Sbjct: 144 TTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVD 203

Query: 522 C-ELKVTLS-SDGSSAPSLFQSTGCDIDY 545
           C +L++ LS S+G++  S      CD D+
Sbjct: 204 CDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of Carg16207 vs. TAIR10
Match: AT5G06320.1 (NDR1/HIN1-like 3)

HSP 1 Score: 177.2 bits (448), Expect = 2.8e-44
Identity = 97/212 (45.75%), Postives = 123/212 (58.02%), Query Frame = 0


Query: 347 HHHNRCGSGCGCF------------TTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVT 406
           H H R G GCGC                             A LI+WLIFRPN +KFHVT
Sbjct: 21  HSHGRRGGGCGCLGXXXXXXXXXXXXXXXXXXXXXXXXXXXAALIIWLIFRPNAIKFHVT 80

Query: 407 DAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL-QTKWLPPFY 466
           DAKLT+F L   N L++NL LN T RNPN RIGVYYD IE    Y DQR   +  +  FY
Sbjct: 81  DAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFY 140

Query: 467 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 526
           QGHK T V+  +  GQQL+LL G      N +  + +Y ID +L L+IR KFG ++  +F
Sbjct: 141 QGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRF 200

Query: 527 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDY 545
           KPK+ C+LKV L+S+ +S   +FQ T CD+D+
Sbjct: 201 KPKIKCDLKVPLTSNSTSG-FVFQPTKCDVDF 231

[Close]

BLAST of Carg16207 vs. TAIR10
Match: AT3G11650.1 (NDR1/HIN1-like 2)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-36
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPP--------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M  KQP+LNGA+YGPS+PP                      XXXXXXXXXXXXXXXXXXX
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXWLVFRPNKLRFDVTSAELTQFNF-TGNQLHYNLALNLTIRNPNKRIG 120
           XXXXXXXXXXXXXWL+FRPN ++F V  A L +F+F   N LHY+L LN TIRNPN+R+G
Sbjct: 61  XXXXXXXXXXXXXWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDAIEASPFYKDQRLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKL 180
           VYYD    S +Y DQR  +  +  FYQGHK TTV+  +  GQ LV+LG    T+   ++ 
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEK 180

Query: 181 AGVFNIDVKFRPRLRLKLGAVRIGKLKPKVNC-ELKVPLEST 207
           +G++ I+ K R  +R K   ++  KLKPK+ C +LK+PL S+
Sbjct: 181 SGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSS 222

[Close]

BLAST of Carg16207 vs. TAIR10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-36
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 0


Query: 341 TYHRPGHHHNRCGSG-CGCFTT------------FLKVLITIIIVIGLAVLILWLIFRPN 400
           TY+  G   +  G G CGCF++                       +G+  LILW I RPN
Sbjct: 20  TYYSHGRRGSDVGCGICGCFSSXXXXXXXXXXXXXXXXXXXXXXCLGVVALILWFILRPN 79

Query: 401 KVKFHVTDAKLTQFNL--TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQT 460
            VKF VT+A LT+F      + L +N++LN + RNPN R+G++YD +E    Y DQR   
Sbjct: 80  VVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYDQLEVRGYYGDQRFSA 139

Query: 461 KWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFG 520
             +  FYQGHK T V+  E +GQ+L+LL   G   F  ++ +GVY IDV+L  +    FG
Sbjct: 140 ANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGVYRIDVKLRFKXXXXFG 199

Query: 521 AVRIGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDID 544
            +     +PK+ C LKV LS+  S     F  T C +D
Sbjct: 200 FLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPTKCHVD 237

[Close]

BLAST of Carg16207 vs. TAIR10
Match: AT1G32270.1 (syntaxin, putative)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-25
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 385 RPNKVKFHVTDAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL 444
           R N VKF V DA+LT F+L ++N LQ++L+LN++ RN  + IG++YD  EA   Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 445 QTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLK 504
               +P FY G K T +L   F GQ L+LL G    +F  ++  GVY IDV+L++  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 505 FGAVRIGKFKPKVNCELKVTLSSDGSSA 532
              +     KP V C LK+ L+   S++
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of Carg16207 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.2e-48
Identity = 99/209 (47.37%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 342 YHRPGHHHNRCGSGCGC--FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLT 401
           Y+R GH     G GCGC   + F+KV+I++I+++G+A LI WLI RP  +KFHVTDA LT
Sbjct: 24  YYRRGH-----GRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLT 83

Query: 402 QFNLT--DNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKT 461
           +F+ T  DN L++NLAL +  RNPN RIG+YYD IEA A Y+ +R  T  L PFYQGHK 
Sbjct: 84  RFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKN 143

Query: 462 TAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVN 521
           T VL+P F GQ L++ +       N+E+++GVY+I+++  LR+R K G ++  + KPKV+
Sbjct: 144 TTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVD 203

Query: 522 C-ELKVTLS-SDGSSAPSLFQSTGCDIDY 545
           C +L++ LS S+G++  S      CD D+
Sbjct: 204 CDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of Carg16207 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.0e-43
Identity = 97/212 (45.75%), Postives = 123/212 (58.02%), Query Frame = 0


Query: 347 HHHNRCGSGCGCF------------TTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVT 406
           H H R G GCGC                             A LI+WLIFRPN +KFHVT
Sbjct: 21  HSHGRRGGGCGCLGXXXXXXXXXXXXXXXXXXXXXXXXXXXAALIIWLIFRPNAIKFHVT 80

Query: 407 DAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL-QTKWLPPFY 466
           DAKLT+F L   N L++NL LN T RNPN RIGVYYD IE    Y DQR   +  +  FY
Sbjct: 81  DAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFY 140

Query: 467 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 526
           QGHK T V+  +  GQQL+LL G      N +  + +Y ID +L L+IR KFG ++  +F
Sbjct: 141 QGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRF 200

Query: 527 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDY 545
           KPK+ C+LKV L+S+ +S   +FQ T CD+D+
Sbjct: 201 KPKIKCDLKVPLTSNSTSG-FVFQPTKCDVDF 231

[Close]

BLAST of Carg16207 vs. Swiss-Prot
Match: sp|Q9SRN1|NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-35
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPP--------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M  KQP+LNGA+YGPS+PP                      XXXXXXXXXXXXXXXXXXX
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXWLVFRPNKLRFDVTSAELTQFNF-TGNQLHYNLALNLTIRNPNKRIG 120
           XXXXXXXXXXXXXWL+FRPN ++F V  A L +F+F   N LHY+L LN TIRNPN+R+G
Sbjct: 61  XXXXXXXXXXXXXWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDAIEASPFYKDQRLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKL 180
           VYYD    S +Y DQR  +  +  FYQGHK TTV+  +  GQ LV+LG    T+   ++ 
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEK 180

Query: 181 AGVFNIDVKFRPRLRLKLGAVRIGKLKPKVNC-ELKVPLEST 207
           +G++ I+ K R  +R K   ++  KLKPK+ C +LK+PL S+
Sbjct: 181 SGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSS 222

[Close]

BLAST of Carg16207 vs. Swiss-Prot
Match: sp|Q9C615|SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-24
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 385 RPNKVKFHVTDAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL 444
           R N VKF V DA+LT F+L ++N LQ++L+LN++ RN  + IG++YD  EA   Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 445 QTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLK 504
               +P FY G K T +L   F GQ L+LL G    +F  ++  GVY IDV+L++  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 505 FGAVRIGKFKPKVNCELKVTLSSDGSSA 532
              +     KP V C LK+ L+   S++
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of Carg16207 vs. Swiss-Prot
Match: sp|Q9SJ54|NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-16
Identity = 49/151 (32.45%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 377 VLILWLIFRPNKVKFHVTDAKLTQFNLTD-NQLQFNLALNITARNPNNRIGVYYDTIEAA 436
           + ++W+I +P K +F + DA +  FNL+  N L  N  + I +RN N+RIG+YYD +   
Sbjct: 36  IFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVY 95

Query: 437 AVYKDQRLQTKW-LPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDV 496
           A Y++Q++  +  +PP YQGHK   V SP   G  + +     +A    E+  G   + +
Sbjct: 96  ATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVA-LGDEQNRGFVTLII 155

Query: 497 ELNLRIRLKFGAVRIGKFKPKVNCELKVTLS 526
             + R+R K G +  GK+   V C+  + L+
Sbjct: 156 RADGRVRWKVGTLITGKYHLHVRCQAFINLA 185

[Close]

BLAST of Carg16207 vs. TrEMBL
Match: tr|A0A1S3B7J7|A0A1S3B7J7_CUCME (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103486670 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.9e-72
Identity = 133/167 (79.64%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 380 LWLIFRPNKVKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYK 439
           LWLIFRPNKVKF+VTDAKLTQFNL DNQL FN ALN+T RNPN RIGVYYDTIE++A+YK
Sbjct: 47  LWLIFRPNKVKFNVTDAKLTQFNLIDNQLHFNFALNVTVRNPNKRIGVYYDTIESSAIYK 106

Query: 440 DQRLQTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLR 499
           +QRLQT+WLPPFYQG+KTTAV+S  FSGQQLLLL+GQGL +FN+E++AGVY++++ELNLR
Sbjct: 107 NQRLQTQWLPPFYQGYKTTAVISCVFSGQQLLLLAGQGLTEFNAERVAGVYEMNMELNLR 166

Query: 500 IRLKFGAVRIGKFKPKVNCELKVTLSSDGSS-APSLFQSTGCDIDYW 546
           IRLKFGAVR+GKFKPKVNCE KV LSSDGSS   S+F+STGCDIDYW
Sbjct: 167 IRLKFGAVRVGKFKPKVNCEFKVPLSSDGSSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Carg16207 vs. TrEMBL
Match: tr|A0A0A0LE50|A0A0A0LE50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778990 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70
Identity = 131/167 (78.44%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 380 LWLIFRPNKVKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYK 439
           LWLIFRPNKVKF+VTDAKLTQFNL  NQL +NLALN+T RNPN RIGVYYD+IE++ +YK
Sbjct: 47  LWLIFRPNKVKFNVTDAKLTQFNLIGNQLHYNLALNVTVRNPNKRIGVYYDSIESSPIYK 106

Query: 440 DQRLQTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLR 499
           DQRL+T+WLPPFYQG+KTTAV+S  FSGQQLLLL+GQGL +FN+E +AGVY+++VELNLR
Sbjct: 107 DQRLETQWLPPFYQGYKTTAVISCVFSGQQLLLLAGQGLTEFNAETVAGVYEMNVELNLR 166

Query: 500 IRLKFGAVRIGKFKPKVNCELKVTLSSDGSS-APSLFQSTGCDIDYW 546
           IRLKFGAVRIGKFKPKVNCE KV LSSDG+S   S+F+STGCDIDYW
Sbjct: 167 IRLKFGAVRIGKFKPKVNCEFKVPLSSDGNSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Carg16207 vs. TrEMBL
Match: tr|A0A1S3B7L1|A0A1S3B7L1_CUCME (protein YLS9 OS=Cucumis melo OX=3656 GN=LOC103486671 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 147/217 (67.74%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60
           MADKQPHLNGAFYGP+VPP       XXXXXXXXXXXX                     W
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRXXXXXXXXXXXXTTFLKFFIAIVVVLGVTVLVLW 60

Query: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120
           LVFRPNKL+F VT AELT+FN +GNQLHYNLALNLT+RNPNKRIGVYYD IEASP+YKDQ
Sbjct: 61  LVFRPNKLKFHVTGAELTRFNVSGNQLHYNLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180
           RLNT WL PFYQGHKTTTV++P F+GQQ+V     +LTEFN E LAG+F +DVKFR RLR
Sbjct: 121 RLNTQWLTPFYQGHKTTTVLSPHFDGQQIVFFAGDKLTEFNGETLAGIFEVDVKFRLRLR 180

Query: 181 LKLGAVRIGKLKPKVNCELKVPLESTVPPSTKAHRSR 218
           LK+GAVRIGK KPKVNCELKVPL+S     T    +R
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTSFQTTR 217

[Close]

BLAST of Carg16207 vs. TrEMBL
Match: tr|A0A0A0LBJ4|A0A0A0LBJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779020 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 165/217 (76.04%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60
           MADKQPHLNGAFYGP+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      W
Sbjct: 1   MADKQPHLNGAFYGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVLILW 60

Query: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120
            +FRP+KL FDVT AELT+FN +GNQLHYNLALNLTIRNPNKRIGVYYD IEASPFYKDQ
Sbjct: 61  FLFRPHKLTFDVTDAELTRFNISGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180
           RLNT WLPPFYQGHKTTTV++P F+GQQ+V L   +LTEFN E LAG+FN+D++FR +LR
Sbjct: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQQIVFLAGDKLTEFNGETLAGIFNVDLRFRLQLR 180

Query: 181 LKLGAVRIGKLKPKVNCELKVPLESTVPPSTKAHRSR 218
           LK+G VRIGK KPKVNCELKVPL+S     T    +R
Sbjct: 181 LKVGVVRIGKFKPKVNCELKVPLKSNANSFTFLQATR 217

[Close]

BLAST of Carg16207 vs. TrEMBL
Match: tr|A0A0A0LGS5|A0A0A0LGS5_CUCSA (Hairpin-inducing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779010 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.0e-64
Identity = 136/205 (66.34%), Postives = 155/205 (75.61%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPSVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 60
           MADKQPHLNGAFYGP+VPP      XXXXXXXXXXXXX                     W
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHXXXXXXXXXXXXXTTFLKFLIAIVVVLGVAVLVFW 60

Query: 61  LVFRPNKLRFDVTSAELTQFNFTGNQLHYNLALNLTIRNPNKRIGVYYDAIEASPFYKDQ 120
           LVFRPNKL+FDVT A+LT+FN +GNQLHY+LALNLT+RNPNKRIGVYYD IEASP+YKDQ
Sbjct: 61  LVFRPNKLKFDVTGAQLTRFNVSGNQLHYDLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTHWLPPFYQGHKTTTVVTPQFNGQQLVLLGAQELTEFNAEKLAGVFNIDVKFRPRLR 180
           RLNT WL PFYQGHKTT+V++PQF+GQQ+V+    +LTEFN E LAGVF +D        
Sbjct: 121 RLNTQWLTPFYQGHKTTSVLSPQFDGQQIVIFAGDKLTEFNGETLAGVFEVDXXXXXXXX 180

Query: 181 LKLGAVRIGKLKPKVNCELKVPLES 206
             +GAVRIGK +PKVNCELKVPL+S
Sbjct: 181 XXVGAVRIGKFRPKVNCELKVPLKS 205

The following BLAST results are available for this feature:

BLAST of Carg16207 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945227.1	1.6e-117	99.53	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
XP_023005762.1	2.2e-111	95.31	NDR1/HIN1-like protein 10 [Cucurbita maxima]	[more]
XP_023539525.1	4.3e-91	83.18	NDR1/HIN1-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_023522982.1	2.7e-85	97.16	NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo] >XP_023540238.1 NDR1/HIN1...	[more]
XP_022949287.1	5.1e-84	96.21	NDR1/HIN1-like protein 10 [Cucurbita moschata]	[more]

BLAST of Carg16207 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35980.1	2.9e-49	47.37	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	2.8e-44	45.75	NDR1/HIN1-like 3	[more]
AT3G11650.1	1.3e-36	51.80	NDR1/HIN1-like 2	[more]
AT2G35460.1	3.7e-36	37.61	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	1.0e-25	41.22	syntaxin, putative	[more]

BLAST of Carg16207 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ52\|NHL10_ARATH	5.2e-48	47.37	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
sp\|Q9FNH6\|NHL3_ARATH	5.0e-43	45.75	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
sp\|Q9SRN1\|NHL2_ARATH	2.3e-35	51.80	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
sp\|Q9C615\|SYP24_ARATH	1.8e-24	41.22	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
sp\|Q9SJ54\|NHL12_ARATH	1.4e-16	32.45	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]

BLAST of Carg16207 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7J7\|A0A1S3B7J7_CUCME	2.9e-72	79.64	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103486670 PE=4 SV=1	[more]
tr\|A0A0A0LE50\|A0A0A0LE50_CUCSA	1.6e-70	78.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778990 PE=4 SV=1	[more]
tr\|A0A1S3B7L1\|A0A1S3B7L1_CUCME	4.7e-70	67.74	protein YLS9 OS=Cucumis melo OX=3656 GN=LOC103486671 PE=4 SV=1	[more]
tr\|A0A0A0LBJ4\|A0A0A0LBJ4_CUCSA	9.8e-68	76.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779020 PE=4 SV=1	[more]
tr\|A0A0A0LGS5\|A0A0A0LGS5_CUCSA	5.0e-64	66.34	Hairpin-inducing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779010 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16207-RA	Carg16207-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 416..518 e-value: 8.9E-12 score: 45.3 coord: 94..197 e-value: 5.2E-12 score: 46.1
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 12..206
None	No IPR available	PANTHER	PTHR31415:SF4	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 211..336
None	No IPR available	PANTHER	PTHR31415:SF4	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 12..206 coord: 341..544
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 341..544 coord: 211..336

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16207	Silver-seed gourd	carcarB291
Carg16207	Cucumber (Gy14) v2	carcgybB0676
Carg16207	Cucumber (Gy14) v1	carcgyB0758
Carg16207	Cucurbita maxima (Rimu)	carcmaB0955
Carg16207	Cucurbita maxima (Rimu)	carcmaB0957
Carg16207	Cucurbita moschata (Rifu)	carcmoB0931
Carg16207	Cucurbita moschata (Rifu)	carcmoB0933
Carg16207	Cucurbita pepo (Zucchini)	carcpeB0956
Carg16207	Cucurbita pepo (Zucchini)	carcpeB0957
Carg16207	Wild cucumber (PI 183967)	carcpiB0712
Carg16207	Cucumber (Chinese Long) v2	carcuB0700
Carg16207	Cucumber (Chinese Long) v3	carcucB0714
Carg16207	Bottle gourd (USVL1VR-Ls)	carlsiB620
Carg16207	Melon (DHL92) v3.5.1	carmeB0679
Carg16207	Melon (DHL92) v3.6.1	carmedB0691
Carg16207	Watermelon (Charleston Gray)	carwcgB0656
Carg16207	Watermelon (97103) v1	carwmB0677
Carg16207	Watermelon (97103) v2	carwmbB0706
Carg16207	Wax gourd	carwgoB0795
Carg16207	Wax gourd	carwgoB0796