Carg16201 (gene) Silver-seed gourd

NameCarg16201
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPeroxiredoxin
LocationCucurbita_argyrosperma_scaffold_077 : 6539 .. 8672 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGGTGAACCGGGGAGCTATCCAACGCTTCCCTTTACTTATCCTCTCGCCTCCATTTTTACGCCTTAGACTGACTTTCTGCTGCAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTGTAAGTGTTGCATCTCTCACTATGCCCTTGTTTTGCGGCGTTTCACTCTTTTAGTGAAGTTTGAAATTCGTAATTTTCGTTTTGTTTTCCTTCTGCTTCTTGTTTGGTTTTTCTTTCTGAAGTCCGAATGCATTTAATAGGATGTTTTGTTTTCCCTAATTTTGGTTAATTATGCAGTGATCAATGGGGCATTTTATTCGTATATATTTGGATATTGGCGGCAACAGTTAGCCATTTCTTTTGTTCTCCGACTGCATTATGCCAAAATTTTGGAAATCGAACTTATTATTCCCTCAATGTCGCCTTTTCAAATACCTTTTCTGAAAACTTCTCCTGTCTTCGTTATGTTCTTTGAATTTTTCTTCACGTACTCAGATTATTGATTCAGTCATGCAGGGGTGAGTTTAAACAGTTTGTATCTATTAGAATTTTCATGTATATTGTATATGTAACTTTTGATATTTGTTCGTGCAAGGCAGAAATCAGCATCTTGTAACTCAAAATATGAACATGCGAGTTATTTCTTTTGAGGGTTCCACTTCTGACGTTGTGTTCCATTATTTGTTTTTACAGAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTAATTCTCCATGGCTTAGGTTTTGGATACTGCTTATTCCTCTGTGTTGTCATCTGACTGTATTAGTGCAATGATTTTTGGAGTAGAATTACAGTAAGCCTATAAAAGGTTTGGTTAAAGATTATGTGCAAGTTTCAAAGGTTTACCGTTCGGATTGCATCGTCTTCACATTTGATCTAAAGTGTTACGATTTCAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGGTTTGTTGCACTAAACTATCCCAAATTGAAGCTCAGCAAATATTGTCTTGAGCTGCTTTGAACTTGTGTTTATTTTACCTCCTATTTTGTAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTGTAAGTAGATACTTGCTTCTCTTGTTCAACAAAGTTATACTTTTGCAAAAAAGTTTTGTGTCAATGAAATTCTGCTTCTATTCCTCAAAATGTGGTAGTTTGTTCTTTGAGATTCCACATCAATTGGAGAGAGGAACGAGTGCCAGCAAAGACGCTGGGGCTCGAAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAACGAAATATTCTTTATAAAGGTGTGGAAACCTCGCCCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCTCAAAGAGAACAATATCGGCTAGCGGTGGGCTTGAGCTGTTACAATTTTGGATGTGATTGTGATGATACTAAATAGAACCTTTTTGCAGTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGTCACTAAATCAATTTCAAAATCTTATGGTGCATCTAACAATAAGAAGATTGTTTATCAAGAGTTGTTGTTCATAATTTCCTTGTCTTTGATGTTGCAGGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA

mRNA sequence

ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA

Coding sequence (CDS)

ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA

Protein sequence

MDISRIAPKCVELPASSSAMACSAAAATATALFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDALQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFSAIA
BLAST of Carg16201 vs. NCBI nr
Match: XP_022940528.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 6.2e-103
Identity = 207/262 (79.01%), Postives = 207/262 (79.01%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           LFSSNPSAFP KSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA
Sbjct: 13  LFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 72

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 73  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 132

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD           
Sbjct: 133 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSYGV 192

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 240
                                                      ALQYVQENPDEVCPAGW
Sbjct: 193 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 252

BLAST of Carg16201 vs. NCBI nr
Match: XP_023540867.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102
Identity = 206/262 (78.63%), Postives = 206/262 (78.63%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPS P SISSSRGARSRRSFA
Sbjct: 11  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSPPPSISSSRGARSRRSFA 70

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 71  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 130

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD           
Sbjct: 131 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSYGV 190

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 240
                                                      ALQYVQENPDEVCPAGW
Sbjct: 191 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 250

BLAST of Carg16201 vs. NCBI nr
Match: XP_023005651.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 9.0e-102
Identity = 206/262 (78.63%), Postives = 206/262 (78.63%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           LFSSNPSAFP KSNAPTASAPSSRNLALPKSFVGLRKSFQPSA RSISSSRGARSRRSFA
Sbjct: 11  LFSSNPSAFPAKSNAPTASAPSSRNLALPKSFVGLRKSFQPSALRSISSSRGARSRRSFA 70

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 71  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 130

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD           
Sbjct: 131 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSYGV 190

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 240
                                                      ALQYVQENPDEVCPAGW
Sbjct: 191 LIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 250

BLAST of Carg16201 vs. NCBI nr
Match: XP_022983071.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 3.9e-97
Identity = 196/262 (74.81%), Postives = 200/262 (76.34%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           L SSNPSAFP KS AP ASAP SR LALPKSFVGLRKSFQ SAPRS SS+RGARSRRSFA
Sbjct: 10  LISSNPSAFPTKSTAPIASAPFSRTLALPKSFVGLRKSFQSSAPRSFSSTRGARSRRSFA 69

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRASSELPLVGN+APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 70  VRASSELPLVGNIAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 129

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEFK+LNTE+LGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD           
Sbjct: 130 FSDRYEEFKQLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSFGV 189

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 240
                                                      ALQYVQENPDEVCPAGW
Sbjct: 190 LIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGW 249

BLAST of Carg16201 vs. NCBI nr
Match: XP_022934750.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96
Identity = 195/262 (74.43%), Postives = 199/262 (75.95%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           L SSNPSAFP KS AP ASA  SR LALPKSFVGLRKSFQ SAPRS SS+RGARSRRSFA
Sbjct: 10  LISSNPSAFPTKSTAPIASASFSRTLALPKSFVGLRKSFQSSAPRSFSSTRGARSRRSFA 69

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRASSELPLVGN+APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 70  VRASSELPLVGNIAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 129

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEFK+LNTE+LGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD           
Sbjct: 130 FSDRYEEFKQLNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSFGV 189

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 240
                                                      ALQYVQENPDEVCPAGW
Sbjct: 190 LIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGW 249

BLAST of Carg16201 vs. TAIR10
Match: AT3G11630.1 (Thioredoxin superfamily protein)

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72
Identity = 155/261 (59.39%), Postives = 172/261 (65.90%), Query Frame = 0

Query: 35  SNPSA--FPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAV 94
           S+PS+  FP KS+  + S    R L+ P +   LR  F      +  SS  + SRRSFAV
Sbjct: 12  SSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSLSSTSRRSFAV 71

Query: 95  RA-SSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 154
           +A + +LPLVGN APDFEAEAVFDQEFIKVKLS+YIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 72  KAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITA 131

Query: 155 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 214
           FSDR+ EF++LNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDL YPL+SD           
Sbjct: 132 FSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGV 191

Query: 215 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQY+QENPDEVCPAGW
Sbjct: 192 LIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGW 251

BLAST of Carg16201 vs. TAIR10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B)

HSP 1 Score: 266.2 bits (679), Expect = 2.0e-71
Identity = 146/217 (67.28%), Postives = 156/217 (71.89%), Query Frame = 0

Query: 77  SISSSRGARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILF 136
           S++++R A SRR+FAV+A + +LPLVGN APDFEAEAVFDQEFIKVKLSEYIGKKYVILF
Sbjct: 58  SLTTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILF 117

Query: 137 FYPLDFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQY 196
           FYPLDFTFVCPTEITAFSDRYEEF++LNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDL Y
Sbjct: 118 FYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNY 177

Query: 197 PLVSD------------------------------------------------------A 239
           PLVSD                                                      A
Sbjct: 178 PLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQA 237

BLAST of Carg16201 vs. TAIR10
Match: AT3G26060.2 (Thioredoxin superfamily protein)

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 31/96 (32.29%), Postives = 46/96 (47.92%), Query Frame = 0

Query: 138 PLDFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPL 197
           P D T  C  +  AF D YE+FK+   EV+G+S D   SH A+    +       L Y L
Sbjct: 105 PADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKAFASKYK-------LPYTL 164

Query: 198 VSDALQYVQEN---PDEVCPAGWKPGEKSMKPDPKG 231
           +SD    V+++   P ++   G  PG ++   D  G
Sbjct: 165 LSDEGNKVRKDWGVPGDL--FGALPGRQTYVLDKNG 191

BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q96291|BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 PE=1 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 1.9e-71
Identity = 155/261 (59.39%), Postives = 172/261 (65.90%), Query Frame = 0

Query: 35  SNPSA--FPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAV 94
           S+PS+  FP KS+  + S    R L+ P +   LR  F      +  SS  + SRRSFAV
Sbjct: 12  SSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSLSSTSRRSFAV 71

Query: 95  RA-SSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 154
           +A + +LPLVGN APDFEAEAVFDQEFIKVKLS+YIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 72  KAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITA 131

Query: 155 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 214
           FSDR+ EF++LNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDL YPL+SD           
Sbjct: 132 FSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGV 191

Query: 215 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQY+QENPDEVCPAGW
Sbjct: 192 LIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGW 251

BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q9C5R8|BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g06290 PE=2 SV=3)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-70
Identity = 146/217 (67.28%), Postives = 156/217 (71.89%), Query Frame = 0

Query: 77  SISSSRGARSRRSFAVRA-SSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILF 136
           S++++R A SRR+FAV+A + +LPLVGN APDFEAEAVFDQEFIKVKLSEYIGKKYVILF
Sbjct: 58  SLTTNRSA-SRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILF 117

Query: 137 FYPLDFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQY 196
           FYPLDFTFVCPTEITAFSDRYEEF++LNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDL Y
Sbjct: 118 FYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNY 177

Query: 197 PLVSD------------------------------------------------------A 239
           PLVSD                                                      A
Sbjct: 178 PLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQA 237

BLAST of Carg16201 vs. Swiss-Prot
Match: sp|O24364|BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-68
Identity = 153/261 (58.62%), Postives = 169/261 (64.75%), Query Frame = 0

Query: 35  SNPSA--FPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAV 94
           S+PS+  FP KS+  + S    R L+ P +   LR  F      +  SS  + SRRSFAV
Sbjct: 12  SSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGF------ARRSSLSSTSRRSFAV 71

Query: 95  RA-SSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 154
           +A + +LPLVGN APDFEAEAVFDQEFIKVKLS+YIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 72  KAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITA 131

Query: 155 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 214
           FSDR+ EF++LNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDL YPL+SD           
Sbjct: 132 FSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGV 191

Query: 215 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQY   NPDEVCPAGW
Sbjct: 192 LIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYT-GNPDEVCPAGW 251

BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q6ER94|BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAS1 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.4e-66
Identity = 149/266 (56.02%), Postives = 170/266 (63.91%), Query Frame = 0

Query: 34  SSNPSAFPVKSNAPTASAP--SSRNLALPKSFVGLRKSFQPSA---PRSISSSRGARSRR 93
           SS  +A    S  P A  P  +  +L+LP++         P+A     S SSSR AR+  
Sbjct: 6   SSLATAVSSSSAKPLAGIPPAAPHSLSLPRA---------PAARPLRLSASSSRSARA-S 65

Query: 94  SFAVRAS--SELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCP 153
           SF  RA    + PLVGN APDF+AEAVFDQEFI VKLS+YIGKKYVILFFYPLDFTFVCP
Sbjct: 66  SFVARAGGVDDAPLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCP 125

Query: 154 TEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD------ 213
           TEITAFSDRY+EF++LNTE+LGVS+DSVFSHLAWVQTDRKSGGLGDL+YPL+SD      
Sbjct: 126 TEITAFSDRYDEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSIS 185

Query: 214 ------------------------------------------------ALQYVQENPDEV 239
                                                           ALQYVQ+NPDEV
Sbjct: 186 KSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQALQYVQDNPDEV 245

BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q96468|BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=BAS1 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-64
Identity = 132/207 (63.77%), Postives = 145/207 (70.05%), Query Frame = 0

Query: 88  RSFAVRASSE--LPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVC 147
           RSF  RA++E  LPLVGN APDF AEAVFDQEFI VKLS+YIGKKYVILFFYPLDFTFVC
Sbjct: 5   RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVC 64

Query: 148 PTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----- 207
           PTEITAFSDR+EEF+++NTE+LGVSVDSVFSHLAWVQT+RKSGGLGDL+YPLVSD     
Sbjct: 65  PTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSI 124

Query: 208 -------------------------------------------------ALQYVQENPDE 239
                                                            ALQYV++ PDE
Sbjct: 125 SKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQALQYVKK-PDE 184

BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A0A0LB09|A0A0A0LB09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778410 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.6e-94
Identity = 192/264 (72.73%), Postives = 199/264 (75.38%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSI--SSSRGARSRRS 91
           L SSNPS+FP KSN P ASAP SR LALPKSF+GLRKSFQPSAPRS   SSSRG RSR S
Sbjct: 10  LISSNPSSFPAKSNPPIASAPFSRTLALPKSFLGLRKSFQPSAPRSFSSSSSRGTRSRPS 69

Query: 92  FAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEI 151
           F+VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEI
Sbjct: 70  FSVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEI 129

Query: 152 TAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD--------- 211
           TAFSDRY+EFK+LNTEVLGVS+DSVFSHLAWVQTDRKSGGLGDLQYPLVSD         
Sbjct: 130 TAFSDRYDEFKQLNTEVLGVSIDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSY 189

Query: 212 ---------------------------------------------ALQYVQENPDEVCPA 240
                                                        ALQYVQENPDEVCPA
Sbjct: 190 GVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPA 249

BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A1S3B6V4|A0A1S3B6V4_CUCME (2-Cys peroxiredoxin BAS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486662 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 7.0e-87
Identity = 181/265 (68.30%), Postives = 187/265 (70.57%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPR---SISSSRGARSRR 91
           L SSNPS+FP KSN P ASAP SR LALPKSF+GLRKSFQPSAPR               
Sbjct: 10  LISSNPSSFPAKSNPPIASAPFSRTLALPKSFLGLRKSFQPSAPRXXXXXXXXXXXXXXX 69

Query: 92  SFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTE 151
              VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTE
Sbjct: 70  XXXVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTE 129

Query: 152 ITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD-------- 211
           ITAFSDRY+EFK+LNTEVLGVS+DSVFSHLAWVQTDRKSGGLGDLQYPLVSD        
Sbjct: 130 ITAFSDRYDEFKQLNTEVLGVSIDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKS 189

Query: 212 ----------------------------------------------ALQYVQENPDEVCP 240
                                                         ALQYVQENPDEVCP
Sbjct: 190 YGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCP 249

BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A2I4H513|A0A2I4H513_9ROSI (2-Cys peroxiredoxin BAS1, chloroplastic OS=Juglans regia OX=51240 GN=LOC109013543 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.3e-84
Identity = 171/261 (65.52%), Postives = 190/261 (72.80%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           LFSSNP AF + S +P  S P S++L +PKSF+GLRK  Q  APRS+S +RG+RSRRSF 
Sbjct: 10  LFSSNPRAFSINSASP-ISNPFSQSLTIPKSFIGLRKPLQSHAPRSVSLTRGSRSRRSFV 69

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRAS++LPLVGN+APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 70  VRASTDLPLVGNIAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 129

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDR+ EF++LNTE+LGVS+DSVFSHLAWVQTDRKSGGLGDL+YPL+SD           
Sbjct: 130 FSDRHAEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGV 189

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQYVQENPDEVCPAGW
Sbjct: 190 LIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGW 249

BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A2I4E114|A0A2I4E114_9ROSI (2-Cys peroxiredoxin BAS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108985296 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.2e-79
Identity = 166/261 (63.60%), Postives = 183/261 (70.11%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           LF+SNP AF   + A + S P S+ L +PKSF GL K  Q   PRSIS +RG+ SRR+F+
Sbjct: 10  LFASNPRAFST-TPAASISNPFSQTLTIPKSFNGLHKPLQSHVPRSISLTRGSHSRRAFS 69

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           VRAS+ELPLVGN APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 70  VRASTELPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 129

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDR+ EF++LNTE+LGVS DSVFSHLAWVQTDRKSGGLGDL+YPL+SD           
Sbjct: 130 FSDRHAEFEQLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGV 189

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQYVQENPDEVCPAGW
Sbjct: 190 LIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGW 249

BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A1R3IIY7|A0A1R3IIY7_COCAP (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant OS=Corchorus capsularis OX=210143 GN=CCACVL1_11925 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-78
Identity = 167/261 (63.98%), Postives = 179/261 (68.58%), Query Frame = 0

Query: 32  LFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFA 91
           L SSNP AF  KS       P S++LALP SF G R        RS+S SR + SRRSF 
Sbjct: 13  LISSNPRAFSAKSK------PVSQSLALPNSFAGSRAPLLSRVARSVSLSRNSHSRRSFV 72

Query: 92  VRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITA 151
           V+ASSELPLVGNVAPDFEAEAVFDQEFIKVKLS+YIGKKYVILFFYPLDFTFVCPTEITA
Sbjct: 73  VKASSELPLVGNVAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITA 132

Query: 152 FSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSD----------- 211
           FSDRYEEF++LNTEVLGVS+DSVFSHLAWVQTDRKSGGLGDL+YPLVSD           
Sbjct: 133 FSDRYEEFEKLNTEVLGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLVSDVTKSISKSFGV 192

Query: 212 -------------------------------------------ALQYVQENPDEVCPAGW 239
                                                      ALQYVQENPDEVCPAGW
Sbjct: 193 LIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQALQYVQENPDEVCPAGW 252

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022940528.16.2e-10379.012-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita moschata][more]
XP_023540867.15.3e-10278.632-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_023005651.19.0e-10278.632-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita maxima][more]
XP_022983071.13.9e-9774.812-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita maxima][more]
XP_022934750.13.3e-9674.432-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G11630.11.1e-7259.39Thioredoxin superfamily protein[more]
AT5G06290.12.0e-7167.282-cysteine peroxiredoxin B[more]
AT3G26060.26.2e-0432.29Thioredoxin superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q96291|BAS1A_ARATH1.9e-7159.392-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 ... [more]
sp|Q9C5R8|BAS1B_ARATH3.6e-7067.282-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|O24364|BAS1_SPIOL2.6e-6858.622-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=... [more]
sp|Q6ER94|BAS1_ORYSJ5.4e-6656.022-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q96468|BAS1_HORVU5.1e-6463.772-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LB09|A0A0A0LB09_CUCSA1.6e-9472.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778410 PE=4 SV=1[more]
tr|A0A1S3B6V4|A0A1S3B6V4_CUCME7.0e-8768.302-Cys peroxiredoxin BAS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A2I4H513|A0A2I4H513_9ROSI4.3e-8465.522-Cys peroxiredoxin BAS1, chloroplastic OS=Juglans regia OX=51240 GN=LOC10901354... [more]
tr|A0A2I4E114|A0A2I4E114_9ROSI3.2e-7963.602-Cys peroxiredoxin BAS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108... [more]
tr|A0A1R3IIY7|A0A1R3IIY7_COCAP1.2e-7863.98Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant OS=Corchorus... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0051920peroxiredoxin activity
GO:0016209antioxidant activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain
IPR019479Peroxiredoxin_C
IPR000866AhpC/TSA
IPR024706Peroxiredoxin_AhpC-typ
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0016209 antioxidant activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16201-RACarg16201-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024706Peroxiredoxin, AhpC-typePIRSFPIRSF000239AHPCcoord: 198..238
e-value: 0.0062
score: 13.4
coord: 94..208
e-value: 6.1E-36
score: 121.2
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 101..203
e-value: 5.7E-28
score: 97.2
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 98..200
e-value: 1.5E-44
score: 153.6
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 201..239
e-value: 1.7E-7
score: 32.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..239
NoneNo IPR availablePANTHERPTHR10681THIOREDOXIN PEROXIDASEcoord: 200..238
NoneNo IPR availablePANTHERPTHR10681:SF1402-CYS PEROXIREDOXIN BAS1-LIKE, CHLOROPLASTICcoord: 200..238
coord: 40..200
NoneNo IPR availablePANTHERPTHR10681THIOREDOXIN PEROXIDASEcoord: 40..200
NoneNo IPR availableCDDcd03015PRX_Typ2cyscoord: 101..220
e-value: 1.73255E-64
score: 199.653
IPR019479Peroxiredoxin, C-terminalPFAMPF104171-cysPrx_Ccoord: 201..236
e-value: 9.4E-12
score: 44.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 99..239
score: 13.415
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 99..236